******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/SPI1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr12:58268043-58268123 1.0000 80 chr9:77703988-77704068 1.0000 80 chr1:230286182-230286262 1.0000 80 chr17:66494276-66494356 1.0000 80 chr4:155406407-155406487 1.0000 80 chr1:108586485-108586565 1.0000 80 chr6:154623406-154623486 1.0000 80 chr1:206329078-206329158 1.0000 80 chr17:73567441-73567521 1.0000 80 chr6:44232099-44232179 1.0000 80 chr12:166012-166092 1.0000 80 chr2:179041944-179042024 1.0000 80 chr8:106407729-106407809 1.0000 80 chr16:50315975-50316055 1.0000 80 chr10:112477879-11247795 1.0000 80 chr10:70809497-70809577 1.0000 80 chr14:103040009-10304008 1.0000 80 chr19:56833401-56833481 1.0000 80 chr21:33394618-33394698 1.0000 80 chr5:176748069-176748149 1.0000 80 chr6:130427627-130427707 1.0000 80 chr4:2772637-2772717 1.0000 80 chr5:131803502-131803582 1.0000 80 chr16:2737359-2737439 1.0000 80 chr10:30876540-30876620 1.0000 80 chr2:43333239-43333319 1.0000 80 chr8:110378625-110378705 1.0000 80 chr19:7952665-7952745 1.0000 80 chr12:104500870-10450095 1.0000 80 chr18:45497277-45497357 1.0000 80 chr2:106356741-106356821 1.0000 80 chr6:36660167-36660247 1.0000 80 chrX:151304941-151305021 1.0000 80 chr13:113238028-11323810 1.0000 80 chr10:112262849-11226292 1.0000 80 chr2:146529261-146529341 1.0000 80 chr10:73006807-73006887 1.0000 80 chr5:81126581-81126661 1.0000 80 chr2:196444970-196445050 1.0000 80 chr1:112158654-112158734 1.0000 80 chr5:169785339-169785419 1.0000 80 chr10:27825519-27825599 1.0000 80 chr7:158488964-158489044 1.0000 80 chr9:137297456-137297536 1.0000 80 chr7:130689292-130689372 1.0000 80 chr5:72233698-72233778 1.0000 80 chr17:29818533-29818613 1.0000 80 chr7:156573546-156573626 1.0000 80 chr22:42958558-42958638 1.0000 80 chr11:74033011-74033091 1.0000 80 chr3:115757496-115757576 1.0000 80 chr16:30177672-30177752 1.0000 80 chr2:127395131-127395211 1.0000 80 chr7:26369605-26369685 1.0000 80 chr8:105342124-105342204 1.0000 80 chr6:49605191-49605271 1.0000 80 chr1:207110945-207111025 1.0000 80 chr8:145052786-145052866 1.0000 80 chr15:72487608-72487688 1.0000 80 chr18:22805288-22805368 1.0000 80 chr21:15680723-15680803 1.0000 80 chr3:72572673-72572753 1.0000 80 chr20:61609446-61609526 1.0000 80 chr2:225503123-225503203 1.0000 80 chr4:74047142-74047222 1.0000 80 chr9:75646445-75646525 1.0000 80 chr16:30564872-30564952 1.0000 80 chr4:26938946-26939026 1.0000 80 chr1:93994093-93994173 1.0000 80 chr2:112761939-112762019 1.0000 80 chr10:15527176-15527256 1.0000 80 chr5:149438489-149438569 1.0000 80 chr2:158999205-158999285 1.0000 80 chr1:204468260-204468340 1.0000 80 chr19:49619945-49620025 1.0000 80 chr18:46242139-46242219 1.0000 80 chrX:117748268-117748348 1.0000 80 chr10:98524210-98524290 1.0000 80 chr8:41427629-41427709 1.0000 80 chr7:139994423-139994503 1.0000 80 chr7:7908047-7908127 1.0000 80 chr10:15231651-15231731 1.0000 80 chr14:91591677-91591757 1.0000 80 chr11:10846578-10846658 1.0000 80 chr5:148929543-148929623 1.0000 80 chr9:124822915-124822995 1.0000 80 chr11:12688611-12688691 1.0000 80 chr11:59831741-59831821 1.0000 80 chr1:43409999-43410079 1.0000 80 chr7:99474310-99474390 1.0000 80 chr6:91169281-91169361 1.0000 80 chrX:39350868-39350948 1.0000 80 chr15:52053142-52053222 1.0000 80 chr1:42372803-42372883 1.0000 80 chr1:198101350-198101430 1.0000 80 chr12:49923363-49923443 1.0000 80 chr1:223351259-223351339 1.0000 80 chr17:57790363-57790443 1.0000 80 chr1:234977646-234977726 1.0000 80 chr2:29223461-29223541 1.0000 80 chr1:157481989-157482069 1.0000 80 chr12:53649933-53650013 1.0000 80 chr17:45277529-45277609 1.0000 80 chr5:121358861-121358941 1.0000 80 chr5:96240173-96240253 1.0000 80 chr6:15683824-15683904 1.0000 80 chr7:12476949-12477029 1.0000 80 chr8:105476594-105476674 1.0000 80 chr11:73695443-73695523 1.0000 80 chr6:35361962-35362042 1.0000 80 chr6:151501603-151501683 1.0000 80 chr5:171061251-171061331 1.0000 80 chr5:108194872-108194952 1.0000 80 chr4:24770378-24770458 1.0000 80 chr1:113256722-113256802 1.0000 80 chr7:107279155-107279235 1.0000 80 chrX:153947063-153947143 1.0000 80 chr2:102650049-102650129 1.0000 80 chr3:107821447-107821527 1.0000 80 chr1:52016873-52016953 1.0000 80 chr7:24911557-24911637 1.0000 80 chr8:19756017-19756097 1.0000 80 chr2:64701570-64701650 1.0000 80 chr11:6668366-6668446 1.0000 80 chr3:150353420-150353500 1.0000 80 chr7:112196912-112196992 1.0000 80 chr18:46402288-46402368 1.0000 80 chr3:99979070-99979150 1.0000 80 chr21:36318735-36318815 1.0000 80 chr22:37256928-37257008 1.0000 80 chr20:57582917-57582997 1.0000 80 chr14:20961963-20962043 1.0000 80 chr2:62372873-62372953 1.0000 80 chr2:28762005-28762085 1.0000 80 chr7:99966942-99967022 1.0000 80 chrX:48559458-48559538 1.0000 80 chr11:67886712-67886792 1.0000 80 chr18:8601395-8601475 1.0000 80 chr6:20223521-20223601 1.0000 80 chr11:114133570-11413365 1.0000 80 chr16:30151267-30151347 1.0000 80 chr20:39126828-39126908 1.0000 80 chr15:39646544-39646624 1.0000 80 chr1:246734821-246734901 1.0000 80 chr5:86377479-86377559 1.0000 80 chr3:5079752-5079832 1.0000 80 chr16:11302868-11302948 1.0000 80 chr2:61023866-61023946 1.0000 80 chr7:130760324-130760404 1.0000 80 chr12:54569367-54569447 1.0000 80 chr3:40449253-40449333 1.0000 80 chr5:1191145-1191225 1.0000 80 chr12:105143974-10514405 1.0000 80 chr4:109935902-109935982 1.0000 80 chr20:32064008-32064088 1.0000 80 chr10:62735643-62735723 1.0000 80 chr11:88092881-88092961 1.0000 80 chr19:18512802-18512882 1.0000 80 chr7:8216998-8217078 1.0000 80 chr1:161197521-161197601 1.0000 80 chr9:101962590-101962670 1.0000 80 chr7:66919162-66919242 1.0000 80 chr9:95805554-95805634 1.0000 80 chr3:31503566-31503646 1.0000 80 chr12:91983000-91983080 1.0000 80 chr16:11913785-11913865 1.0000 80 chr21:34439950-34440030 1.0000 80 chr22:31886570-31886650 1.0000 80 chr12:113841861-11384194 1.0000 80 chr16:71126036-71126116 1.0000 80 chr4:139697134-139697214 1.0000 80 chr6:166756763-166756843 1.0000 80 chr21:38737174-38737254 1.0000 80 chr8:48435026-48435106 1.0000 80 chr1:154130995-154131075 1.0000 80 chr16:68281401-68281481 1.0000 80 chr6:110836200-110836280 1.0000 80 chr6:14982420-14982500 1.0000 80 chr7:104897836-104897916 1.0000 80 chr5:169766106-169766186 1.0000 80 chr9:32899305-32899385 1.0000 80 chr2:197114697-197114777 1.0000 80 chr14:100481815-10048189 1.0000 80 chr10:75950073-75950153 1.0000 80 chr19:47366389-47366469 1.0000 80 chr3:44087435-44087515 1.0000 80 chr18:1308815-1308895 1.0000 80 chr12:124971872-12497195 1.0000 80 chr3:193559875-193559955 1.0000 80 chr5:131823805-131823885 1.0000 80 chr5:34732157-34732237 1.0000 80 chr7:77327753-77327833 1.0000 80 chr2:218113534-218113614 1.0000 80 chr17:72474970-72475050 1.0000 80 chr1:22251180-22251260 1.0000 80 chr1:33985242-33985322 1.0000 80 chr10:33294259-33294339 1.0000 80 chr3:32619394-32619474 1.0000 80 chr12:32914793-32914873 1.0000 80 chr7:75261192-75261272 1.0000 80 chr9:90333939-90334019 1.0000 80 chr1:186035740-186035820 1.0000 80 chr4:127937029-127937109 1.0000 80 chr2:65455534-65455614 1.0000 80 chr7:12624716-12624796 1.0000 80 chr21:43481637-43481717 1.0000 80 chr6:39074978-39075058 1.0000 80 chr20:35471915-35471995 1.0000 80 chr10:114745823-11474590 1.0000 80 chr7:142652089-142652169 1.0000 80 chr12:90321061-90321141 1.0000 80 chr2:169896379-169896459 1.0000 80 chr7:151330201-151330281 1.0000 80 chr2:71299269-71299349 1.0000 80 chr4:127568690-127568770 1.0000 80 chrX:65266859-65266939 1.0000 80 chr2:216676481-216676561 1.0000 80 chr2:64488085-64488165 1.0000 80 chr7:131304520-131304600 1.0000 80 chr7:107935211-107935291 1.0000 80 chr3:53017617-53017697 1.0000 80 chr10:72443176-72443256 1.0000 80 chr2:231576183-231576263 1.0000 80 chr10:6110466-6110546 1.0000 80 chr3:186743051-186743131 1.0000 80 chr20:32953743-32953823 1.0000 80 chr12:124875975-12487605 1.0000 80 chr1:35384871-35384951 1.0000 80 chr7:100485354-100485434 1.0000 80 chr6:7431655-7431735 1.0000 80 chr6:161591325-161591405 1.0000 80 chr4:86647202-86647282 1.0000 80 chr2:113013554-113013634 1.0000 80 chr17:39662485-39662565 1.0000 80 chr11:75287694-75287774 1.0000 80 chr5:169696045-169696125 1.0000 80 chr5:141044733-141044813 1.0000 80 chr22:31391071-31391151 1.0000 80 chr16:85605449-85605529 1.0000 80 chr20:13843045-13843125 1.0000 80 chr2:97322418-97322498 1.0000 80 chr4:52772598-52772678 1.0000 80 chr19:39155372-39155452 1.0000 80 chr12:53350863-53350943 1.0000 80 chr6:44537949-44538029 1.0000 80 chr20:1357469-1357549 1.0000 80 chr1:25542757-25542837 1.0000 80 chr15:62414524-62414604 1.0000 80 chr10:126258549-12625862 1.0000 80 chr10:65458330-65458410 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_SPI1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/SPI1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.261 C 0.232 G 0.248 T 0.259 Background letter frequencies (from file dataset with add-one prior applied): A 0.261 C 0.232 G 0.248 T 0.259 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GAGGAAGT MEME-1 width = 8 sites = 144 llr = 1363 E-value = 2.8e-229 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 18::aa:: pos.-specific C 1:::::1: probability G 92aa::9: matrix T :::::::a bits 2.1 ** 1.9 **** * 1.7 **** * 1.5 ****** Relative 1.3 * ****** Entropy 1.1 ******** (13.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAGGAAGT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr15:62414524-62414604 36 1.74e-05 AATTCAAAAA GAGGAAGT GAAGGGCTTG chr1:25542757-25542837 30 1.74e-05 TTGGCAGAAA GAGGAAGT CTCTGCTAGT chr20:13843045-13843125 44 1.74e-05 CTCAGAAAAA GAGGAAGT GCCCTGTATG chr22:31391071-31391151 47 1.74e-05 ttccacaaaa gaggaagt ggaaattgtc chr5:141044733-141044813 52 1.74e-05 AAGAAACTTT GAGGAAGT GGGCAATGGC chr11:75287694-75287774 50 1.74e-05 CAGCAAGAAT GAGGAAGT GGCTTTGTAT chr17:39662485-39662565 28 1.74e-05 ggcatggaaa gaggaagt ggccctgtcc chr2:113013554-113013634 43 1.74e-05 cataggaaaa gaggaagt gggcattcca chr6:7431655-7431735 30 1.74e-05 CTTCCAAAAT GAGGAAGT GAGTGTTCTT chr7:100485354-100485434 21 1.74e-05 AGAGAAAATT GAGGAAGT GAAAAAGGAA chr20:32953743-32953823 32 1.74e-05 TGAGACGAAA GAGGAAGT GGCCAATTCT chr10:72443176-72443256 30 1.74e-05 AGTGTGGAAA GAGGAAGT CACTGCTTCG chr3:53017617-53017697 38 1.74e-05 agagggaaat gaggaagt gagccatgtg chr2:216676481-216676561 53 1.74e-05 tctctgaaaa gaggaagt gaattttttt chrX:65266859-65266939 35 1.74e-05 GACAGAAAAA GAGGAAGT GAGACAGTTG chr7:151330201-151330281 40 1.74e-05 GGGCCTGAAA GAGGAAGT CCTGAAAATG chr20:35471915-35471995 33 1.74e-05 TTAAAAAAAT GAGGAAGT GAAGGATCCA chr9:90333939-90334019 46 1.74e-05 AAGTGCTTTT GAGGAAGT TTTGAATGGA chr1:33985242-33985322 48 1.74e-05 GGCGATAAAA GAGGAAGT GCCCACGGCA chr7:77327753-77327833 52 1.74e-05 TTCTCTGAAA GAGGAAGT GAATATGAGT chr14:100481815-10048189 48 1.74e-05 ACACTAGAAA GAGGAAGT GAATCCAGAT chr2:197114697-197114777 22 1.74e-05 GATGCTAAAT GAGGAAGT GAACTCAGCC chr5:169766106-169766186 35 1.74e-05 CATCAAGAAA GAGGAAGT GGCATTGAGT chr7:104897836-104897916 27 1.74e-05 ccaaagagaa gaggaagt gccactgctg chr8:48435026-48435106 51 1.74e-05 CAGAGGGAAA GAGGAAGT CTCTATGTCC chr7:66919162-66919242 27 1.74e-05 GGGAAAAAAG GAGGAAGT GGTTGGGGTG chr19:18512802-18512882 39 1.74e-05 ATAAAGAAAT GAGGAAGT GCCAGACCCG chr11:88092881-88092961 48 1.74e-05 ACACTGAAAA GAGGAAGT GGTTTCTGTA chr10:62735643-62735723 47 1.74e-05 GGTGGAAAAT GAGGAAGT GGAAGGGAGG chr4:109935902-109935982 41 1.74e-05 GGAGGGAAAA GAGGAAGT GGTTGATAGA chr12:105143974-10514405 20 1.74e-05 AACTAGGAAT GAGGAAGT GGTAAGGAAA chr5:1191145-1191225 31 1.74e-05 atgaacaaaa gaggaagt gcagaagtcg chr3:40449253-40449333 45 1.74e-05 gttgaagaaa gaggaagt gcgcaattag chr7:130760324-130760404 21 1.74e-05 AAGGTAAAAA GAGGAAGT CGTTTTCCAT chr16:11302868-11302948 13 1.74e-05 aaaaaaaaaa gaggaaGT GAGGTTGGAA chr15:39646544-39646624 44 1.74e-05 gtccaggaaa gaggaagt gacctgccTG chr11:114133570-11413365 50 1.74e-05 TGGAGGGAAA GAGGAAGT GCATCAGGAC chr6:20223521-20223601 32 1.74e-05 tttcaagaat gaggaagt gtcctgggag chr18:8601395-8601475 42 1.74e-05 tgaaaagaat gaggaagt ggttgttgca chr11:67886712-67886792 34 1.74e-05 GAAGCACAAA GAGGAAGT GAAGCTCAAA chr2:62372873-62372953 22 1.74e-05 cttccaaaaa gaggaagt ggggctgatt chr14:20961963-20962043 53 1.74e-05 CAAAACAAAA GAGGAAGT CAGAGGTGGA chr22:37256928-37257008 65 1.74e-05 GGTGAGGTAA GAGGAAGT GTGGGCCA chr11:6668366-6668446 49 1.74e-05 ATAAAAGAAA GAGGAAGT GAGAAGAGGT chr8:19756017-19756097 30 1.74e-05 aaggcgaaaa gaggaagt gaggcaaagg chrX:153947063-153947143 55 1.74e-05 GATTCTAAAA GAGGAAGT CAAACTAAGC chr7:107279155-107279235 52 1.74e-05 tctctgaaaa gaggaagt gaatgtggct chr6:15683824-15683904 18 1.74e-05 aagcttaaaa gaggaagt ggcattaact chr5:96240173-96240253 23 1.74e-05 AGAAAGAAAA GAGGAAGT GAGGCTTAAT chr5:121358861-121358941 28 1.74e-05 taggagaaaa gaggaagt ggaatttcgt chr17:45277529-45277609 58 1.74e-05 AGAAGTAAAA GAGGAAGT CAGTGGAAAG chr1:157481989-157482069 52 1.74e-05 AAAACAAAAA GAGGAAGT GGGCATAATC chr1:223351259-223351339 42 1.74e-05 AACAAGGAAT GAGGAAGT GGCAGACAGA chr1:198101350-198101430 33 1.74e-05 ttttaagaaa gaggaagt gctgctaata chr1:42372803-42372883 14 1.74e-05 GATTTAAAAA GAGGAAGT GCCTTTCCAA chr7:99474310-99474390 38 1.74e-05 GACACAAATA GAGGAAGT GCTGGGTTGC chr1:43409999-43410079 21 1.74e-05 CTATAAAAAT GAGGAAGT CAGGAAATGT chr11:12688611-12688691 62 1.74e-05 TGGTCATaga gaggaagt ccggagtcat chr7:7908047-7908127 52 1.74e-05 GTTCTGAAAA GAGGAAGT CGGGAGAACA chr10:98524210-98524290 28 1.74e-05 GGGCTGAAAT GAGGAAGT GCGGTATCAG chrX:117748268-117748348 52 1.74e-05 TGACCAAAAT GAGGAAGT GTAGCTGAAT chr18:46242139-46242219 39 1.74e-05 aagatcaaaa gaggaagt ggtatcagca chr19:49619945-49620025 18 1.74e-05 acataataat gaggaagt gcaaagtatt chr1:204468260-204468340 34 1.74e-05 CCTGACAAAA GAGGAAGT CCTCAAGGAC chr2:158999205-158999285 36 1.74e-05 ctgagaaaaa gaggaagt gggattcatt chr10:15527176-15527256 44 1.74e-05 GGCGTGGAAA GAGGAAGT GACTCTTCTG chr1:93994093-93994173 37 1.74e-05 ctagcaaaat gaggaagt gaatcaagaa chr9:75646445-75646525 24 1.74e-05 tttttgaaaa gaggaagt gtgagacttc chr8:145052786-145052866 36 1.74e-05 TGAGCCAAAT GAGGAAGT GGTTCAAACT chr6:49605191-49605271 39 1.74e-05 AAGAGAAAAG GAGGAAGT GGCAGAGATA chr7:26369605-26369685 36 1.74e-05 GGGTGAGAAT GAGGAAGT GCGATCAGGA chr2:127395131-127395211 45 1.74e-05 gtggtggaag gaggaagt ggccatatct chr11:74033011-74033091 35 1.74e-05 TGCTCCAAAA GAGGAAGT GCACGGAACT chr7:156573546-156573626 53 1.74e-05 ACATGGAAAT GAGGAAGT GGGGGAGAAT chr5:72233698-72233778 34 1.74e-05 TGAGACAAAA GAGGAAGT GACTTCCAGT chr9:137297456-137297536 46 1.74e-05 AGCCTAGAAA GAGGAAGT GCGTGAGTTC chr7:158488964-158489044 26 1.74e-05 cgggctccga gaggaagt agaagctgcc chr10:27825519-27825599 23 1.74e-05 tcagcagaaa gaggaagt gccagcaaac chr1:112158654-112158734 49 1.74e-05 gaacagaaaa gaggaagt caggaagagg chr5:81126581-81126661 49 1.74e-05 ACCAAGAAAT GAGGAAGT GGCTGGTCTC chr10:73006807-73006887 28 1.74e-05 CAAACCAAAT GAGGAAGT GCATGACCCA chrX:151304941-151305021 53 1.74e-05 GACATGGAAA GAGGAAGT GAGGGGAGTC chr2:106356741-106356821 47 1.74e-05 gttccaaaaa gaggaagt gcctctgggt chr18:45497277-45497357 19 1.74e-05 TAAGAAAAAA GAGGAAGT GTGCCGGTTT chr8:110378625-110378705 52 1.74e-05 actgggaaaa gaggaagt ggaggaggga chr10:30876540-30876620 26 1.74e-05 GAGAGCAAAT GAGGAAGT GGGATCCCAG chr4:2772637-2772717 34 1.74e-05 aaccaagaaa gaggaagt ggtgggatcc chr21:33394618-33394698 57 1.74e-05 AGTGGAATTA GAGGAAGT CGAGAAAAAA chr14:103040009-10304008 49 1.74e-05 ggaagagaaa gaggaagt ggcaggttcc chr2:179041944-179042024 27 1.74e-05 atcccagaaa gaggaagt ggctaatcct chr6:44232099-44232179 65 1.74e-05 CTTAGCAGAG GAGGAAGT AAGCTGGG chr17:73567441-73567521 25 1.74e-05 ctctgtaaat gaggaagt gacagcttcc chr1:108586485-108586565 34 1.74e-05 cagcaaaaaa gaggaagt gctcgcaagc chr4:155406407-155406487 51 1.74e-05 atgcaagaaa gaggaagt ggtcagcagt chr10:65458330-65458410 36 3.40e-05 TTAACAGAAA GGGGAAGT GCTTTACGAA chr16:85605449-85605529 28 3.40e-05 TCCATGAAAT GGGGAAGT GAGTTGGGCG chr10:6110466-6110546 36 3.40e-05 GCCCTCAAAA GGGGAAGT GACCGCTCAC chr4:127568690-127568770 20 3.40e-05 cttatgaaaa ggggaagt gtggacatag chr4:127937029-127937109 30 3.40e-05 CAGCACAAAA GGGGAAGT GGTTAAAGGC chr7:75261192-75261272 49 3.40e-05 GGCAGGAAAT GGGGAAGT GGGAGGGAGA chr9:32899305-32899385 24 3.40e-05 GGCACAAAAT GGGGAAGT GGAGTGACTC chr6:166756763-166756843 51 3.40e-05 ACTAAGAAAT GGGGAAGT GGCATTTTTC chr22:31886570-31886650 17 3.40e-05 TGCACAGAAA GGGGAAGT GCGAGTGGAG chr7:99966942-99967022 47 3.40e-05 GTCACTGAAT GGGGAAGT GGTTGGCCGC chr2:28762005-28762085 47 3.40e-05 TCAGGTAAAA GGGGAAGT GGAATGAGAC chr3:99979070-99979150 35 3.40e-05 GCGGTGTAAA GGGGAAGT GGAACGCGTA chr2:29223461-29223541 33 3.40e-05 TAGGAAGAAA GGGGAAGT GCTCTCAAGA chr14:91591677-91591757 38 3.40e-05 GAGCAGAAAA GGGGAAGT GACTGGCAGA chr8:41427629-41427709 36 3.40e-05 GCACTAGAAA GGggaagt gctgggagac chr10:112262849-11226292 47 3.40e-05 CTGGGGAAAA GGGGAAGT GAAAGATACA chr6:36660167-36660247 26 3.40e-05 ACACCAGAAA GGGGAAGT GCCTCACCCA chr6:44537949-44538029 25 5.03e-05 CAGCTGAAAA GAGGAACT GCTGGAGGTG chr12:124971872-12497195 20 5.03e-05 CCCTGTAAAA GAGGAACT CCCCGCTCGT chr1:113256722-113256802 33 5.03e-05 GATCGGGAAA GAGGAACT GAAATAGAGT chr1:234977646-234977726 46 5.03e-05 GGAGACAAAT GAGGAACT CCCCAGTCAA chr8:105342124-105342204 52 5.03e-05 TCTCTAGAAT GAGGAACT GCAAGGGTGA chr17:29818533-29818613 39 5.03e-05 gcagagaaaa gaggaact gcaagggccc chr12:53350863-53350943 16 6.66e-05 GAAGGTAAAA CAGGAAGT CCCTGGGGAG chr2:231576183-231576263 14 6.66e-05 agagtaaaaa caggaagt cctaactttg chr15:52053142-52053222 51 6.66e-05 AGAGAGAAAA CAGGAAGT GCAGGTTAAA chr11:10846578-10846658 27 6.66e-05 GAACCAAAAA CAGGAAGT GTCACACTAG chr12:91983000-91983080 61 8.49e-05 CAGAAAAGCA AAGGAAGT AAGATATGAC chr5:171061251-171061331 61 8.49e-05 gtttccAAAT AAGGAAGT TCAAGTGTAA chr20:1357469-1357549 17 1.00e-04 TCCAATAAAA GGGGAACT CCAGAGACGC chr3:32619394-32619474 5 1.00e-04 GGGA GGGGAACT TTCCGTAGGT chr6:91169281-91169361 48 1.16e-04 TCCTGTAAAA CGGGAAGT GCAGGGGAGA chr12:166012-166092 43 1.16e-04 agggcaaaaa cgggaagt gcagatatga chr2:65455534-65455614 45 1.33e-04 aaaaaaaaaa aGGGAAGT GCTGTCATGG chr3:44087435-44087515 12 1.33e-04 ATGAAAAAAT AGGGAAGT GCTTCATTCG chr20:39126828-39126908 34 1.33e-04 AGGGCAAAAA AGGGAAGT GAATAAGGAG chr3:107821447-107821527 48 1.33e-04 AAATGAAAAA AGGGAAGT GGGAGAGTGG chr11:73695443-73695523 20 1.33e-04 ACGCTGAAAA AGGGAAGT GGAGATCAAC chr17:57790363-57790443 37 1.33e-04 ggtaagaaaa agggaagt gtcagggatg chr16:30177672-30177752 63 1.33e-04 ggagtgaaat agggaagt ggtttgaggt chr15:72487608-72487688 20 1.49e-04 ggcccagaaa gcggaagt gacttgtccc chr2:64488085-64488165 39 1.66e-04 GAAAGCAGAA GTGGAAGT CCCTGTTGTT chr7:131304520-131304600 2 2.31e-04 A GAGGAAGG CCTAAGGTTC chr3:5079752-5079832 4 2.31e-04 ACA GAGGAGGT ggtgggcagg chr2:112761939-112762019 62 2.31e-04 gcatggccct gaggaagc tgcgggctgc chr8:106407729-106407809 14 2.31e-04 TGGAACTCTA GAGGGAGT TTCCTAGCAT chr16:2737359-2737439 24 2.50e-04 GGGTGGCTGG GAGGAAAT GCTGTCGCTG chr9:95805554-95805634 22 2.65e-04 AATGCAAAAA CAGGAACT GCATGGAGAC chr5:86377479-86377559 64 2.65e-04 TTTCAACATG CAGGAACT AATTTAGCT chr16:30564872-30564952 25 2.65e-04 CATTCAAAAA CAGGAACT GCCTGTTGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:62414524-62414604 1.7e-05 35_[+1]_37 chr1:25542757-25542837 1.7e-05 29_[+1]_43 chr20:13843045-13843125 1.7e-05 43_[+1]_29 chr22:31391071-31391151 1.7e-05 46_[+1]_26 chr5:141044733-141044813 1.7e-05 51_[+1]_21 chr11:75287694-75287774 1.7e-05 49_[+1]_23 chr17:39662485-39662565 1.7e-05 27_[+1]_45 chr2:113013554-113013634 1.7e-05 42_[+1]_30 chr6:7431655-7431735 1.7e-05 29_[+1]_43 chr7:100485354-100485434 1.7e-05 20_[+1]_52 chr20:32953743-32953823 1.7e-05 31_[+1]_41 chr10:72443176-72443256 1.7e-05 29_[+1]_43 chr3:53017617-53017697 1.7e-05 37_[+1]_35 chr2:216676481-216676561 1.7e-05 52_[+1]_20 chrX:65266859-65266939 1.7e-05 34_[+1]_38 chr7:151330201-151330281 1.7e-05 39_[+1]_33 chr20:35471915-35471995 1.7e-05 32_[+1]_40 chr9:90333939-90334019 1.7e-05 45_[+1]_27 chr1:33985242-33985322 1.7e-05 47_[+1]_25 chr7:77327753-77327833 1.7e-05 51_[+1]_21 chr14:100481815-10048189 1.7e-05 47_[+1]_25 chr2:197114697-197114777 1.7e-05 21_[+1]_51 chr5:169766106-169766186 1.7e-05 34_[+1]_38 chr7:104897836-104897916 1.7e-05 26_[+1]_46 chr8:48435026-48435106 1.7e-05 50_[+1]_22 chr7:66919162-66919242 1.7e-05 26_[+1]_46 chr19:18512802-18512882 1.7e-05 38_[+1]_34 chr11:88092881-88092961 1.7e-05 47_[+1]_25 chr10:62735643-62735723 1.7e-05 46_[+1]_26 chr4:109935902-109935982 1.7e-05 40_[+1]_32 chr12:105143974-10514405 1.7e-05 19_[+1]_53 chr5:1191145-1191225 1.7e-05 30_[+1]_42 chr3:40449253-40449333 1.7e-05 44_[+1]_28 chr7:130760324-130760404 1.7e-05 20_[+1]_52 chr16:11302868-11302948 1.7e-05 12_[+1]_60 chr15:39646544-39646624 1.7e-05 43_[+1]_29 chr11:114133570-11413365 1.7e-05 49_[+1]_23 chr6:20223521-20223601 1.7e-05 31_[+1]_41 chr18:8601395-8601475 1.7e-05 41_[+1]_31 chr11:67886712-67886792 1.7e-05 33_[+1]_39 chr2:62372873-62372953 1.7e-05 21_[+1]_51 chr14:20961963-20962043 1.7e-05 52_[+1]_20 chr22:37256928-37257008 1.7e-05 64_[+1]_8 chr11:6668366-6668446 1.7e-05 48_[+1]_24 chr8:19756017-19756097 1.7e-05 29_[+1]_43 chrX:153947063-153947143 1.7e-05 54_[+1]_18 chr7:107279155-107279235 1.7e-05 51_[+1]_21 chr6:15683824-15683904 1.7e-05 17_[+1]_55 chr5:96240173-96240253 1.7e-05 22_[+1]_50 chr5:121358861-121358941 1.7e-05 27_[+1]_45 chr17:45277529-45277609 1.7e-05 57_[+1]_15 chr1:157481989-157482069 1.7e-05 51_[+1]_21 chr1:223351259-223351339 1.7e-05 41_[+1]_31 chr1:198101350-198101430 1.7e-05 32_[+1]_40 chr1:42372803-42372883 1.7e-05 13_[+1]_59 chr7:99474310-99474390 1.7e-05 37_[+1]_35 chr1:43409999-43410079 1.7e-05 20_[+1]_52 chr11:12688611-12688691 1.7e-05 61_[+1]_11 chr7:7908047-7908127 1.7e-05 51_[+1]_21 chr10:98524210-98524290 1.7e-05 27_[+1]_45 chrX:117748268-117748348 1.7e-05 51_[+1]_21 chr18:46242139-46242219 1.7e-05 38_[+1]_34 chr19:49619945-49620025 1.7e-05 17_[+1]_55 chr1:204468260-204468340 1.7e-05 33_[+1]_39 chr2:158999205-158999285 1.7e-05 35_[+1]_37 chr10:15527176-15527256 1.7e-05 43_[+1]_29 chr1:93994093-93994173 1.7e-05 36_[+1]_36 chr9:75646445-75646525 1.7e-05 23_[+1]_49 chr8:145052786-145052866 1.7e-05 35_[+1]_37 chr6:49605191-49605271 1.7e-05 38_[+1]_34 chr7:26369605-26369685 1.7e-05 35_[+1]_37 chr2:127395131-127395211 1.7e-05 44_[+1]_28 chr11:74033011-74033091 1.7e-05 34_[+1]_38 chr7:156573546-156573626 1.7e-05 52_[+1]_20 chr5:72233698-72233778 1.7e-05 33_[+1]_39 chr9:137297456-137297536 1.7e-05 45_[+1]_27 chr7:158488964-158489044 1.7e-05 25_[+1]_47 chr10:27825519-27825599 1.7e-05 22_[+1]_50 chr1:112158654-112158734 1.7e-05 48_[+1]_24 chr5:81126581-81126661 1.7e-05 48_[+1]_24 chr10:73006807-73006887 1.7e-05 27_[+1]_45 chrX:151304941-151305021 1.7e-05 52_[+1]_20 chr2:106356741-106356821 1.7e-05 46_[+1]_26 chr18:45497277-45497357 1.7e-05 18_[+1]_54 chr8:110378625-110378705 1.7e-05 51_[+1]_21 chr10:30876540-30876620 1.7e-05 25_[+1]_47 chr4:2772637-2772717 1.7e-05 33_[+1]_39 chr21:33394618-33394698 1.7e-05 56_[+1]_16 chr14:103040009-10304008 1.7e-05 48_[+1]_24 chr2:179041944-179042024 1.7e-05 26_[+1]_46 chr6:44232099-44232179 1.7e-05 64_[+1]_8 chr17:73567441-73567521 1.7e-05 24_[+1]_48 chr1:108586485-108586565 1.7e-05 33_[+1]_39 chr4:155406407-155406487 1.7e-05 50_[+1]_22 chr10:65458330-65458410 3.4e-05 35_[+1]_37 chr16:85605449-85605529 3.4e-05 27_[+1]_45 chr10:6110466-6110546 3.4e-05 35_[+1]_37 chr4:127568690-127568770 3.4e-05 19_[+1]_53 chr4:127937029-127937109 3.4e-05 29_[+1]_43 chr7:75261192-75261272 3.4e-05 48_[+1]_24 chr9:32899305-32899385 3.4e-05 23_[+1]_49 chr6:166756763-166756843 3.4e-05 50_[+1]_22 chr22:31886570-31886650 3.4e-05 16_[+1]_56 chr7:99966942-99967022 3.4e-05 46_[+1]_26 chr2:28762005-28762085 3.4e-05 46_[+1]_26 chr3:99979070-99979150 3.4e-05 34_[+1]_38 chr2:29223461-29223541 3.4e-05 32_[+1]_40 chr14:91591677-91591757 3.4e-05 37_[+1]_35 chr8:41427629-41427709 3.4e-05 35_[+1]_37 chr10:112262849-11226292 3.4e-05 46_[+1]_26 chr6:36660167-36660247 3.4e-05 25_[+1]_47 chr6:44537949-44538029 5e-05 24_[+1]_48 chr12:124971872-12497195 5e-05 19_[+1]_53 chr1:113256722-113256802 5e-05 32_[+1]_40 chr1:234977646-234977726 5e-05 45_[+1]_27 chr8:105342124-105342204 5e-05 51_[+1]_21 chr17:29818533-29818613 5e-05 38_[+1]_34 chr12:53350863-53350943 6.7e-05 15_[+1]_57 chr2:231576183-231576263 6.7e-05 13_[+1]_59 chr15:52053142-52053222 6.7e-05 50_[+1]_22 chr11:10846578-10846658 6.7e-05 26_[+1]_46 chr12:91983000-91983080 8.5e-05 60_[+1]_12 chr5:171061251-171061331 8.5e-05 60_[+1]_12 chr20:1357469-1357549 0.0001 16_[+1]_56 chr3:32619394-32619474 0.0001 4_[+1]_68 chr6:91169281-91169361 0.00012 47_[+1]_25 chr12:166012-166092 0.00012 42_[+1]_30 chr2:65455534-65455614 0.00013 44_[+1]_28 chr3:44087435-44087515 0.00013 11_[+1]_61 chr20:39126828-39126908 0.00013 33_[+1]_39 chr3:107821447-107821527 0.00013 47_[+1]_25 chr11:73695443-73695523 0.00013 19_[+1]_53 chr17:57790363-57790443 0.00013 36_[+1]_36 chr16:30177672-30177752 0.00013 62_[+1]_10 chr15:72487608-72487688 0.00015 19_[+1]_53 chr2:64488085-64488165 0.00017 38_[+1]_34 chr7:131304520-131304600 0.00023 1_[+1]_71 chr3:5079752-5079832 0.00023 3_[+1]_69 chr2:112761939-112762019 0.00023 61_[+1]_11 chr8:106407729-106407809 0.00023 13_[+1]_59 chr16:2737359-2737439 0.00025 23_[+1]_49 chr9:95805554-95805634 0.00027 21_[+1]_51 chr5:86377479-86377559 0.00027 63_[+1]_9 chr16:30564872-30564952 0.00027 24_[+1]_48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAGGAAGT width=8 seqs=144 chr15:62414524-62414604 ( 36) GAGGAAGT 1 chr1:25542757-25542837 ( 30) GAGGAAGT 1 chr20:13843045-13843125 ( 44) GAGGAAGT 1 chr22:31391071-31391151 ( 47) GAGGAAGT 1 chr5:141044733-141044813 ( 52) GAGGAAGT 1 chr11:75287694-75287774 ( 50) GAGGAAGT 1 chr17:39662485-39662565 ( 28) GAGGAAGT 1 chr2:113013554-113013634 ( 43) GAGGAAGT 1 chr6:7431655-7431735 ( 30) GAGGAAGT 1 chr7:100485354-100485434 ( 21) GAGGAAGT 1 chr20:32953743-32953823 ( 32) GAGGAAGT 1 chr10:72443176-72443256 ( 30) GAGGAAGT 1 chr3:53017617-53017697 ( 38) GAGGAAGT 1 chr2:216676481-216676561 ( 53) GAGGAAGT 1 chrX:65266859-65266939 ( 35) GAGGAAGT 1 chr7:151330201-151330281 ( 40) GAGGAAGT 1 chr20:35471915-35471995 ( 33) GAGGAAGT 1 chr9:90333939-90334019 ( 46) GAGGAAGT 1 chr1:33985242-33985322 ( 48) GAGGAAGT 1 chr7:77327753-77327833 ( 52) GAGGAAGT 1 chr14:100481815-10048189 ( 48) GAGGAAGT 1 chr2:197114697-197114777 ( 22) GAGGAAGT 1 chr5:169766106-169766186 ( 35) GAGGAAGT 1 chr7:104897836-104897916 ( 27) GAGGAAGT 1 chr8:48435026-48435106 ( 51) GAGGAAGT 1 chr7:66919162-66919242 ( 27) GAGGAAGT 1 chr19:18512802-18512882 ( 39) GAGGAAGT 1 chr11:88092881-88092961 ( 48) GAGGAAGT 1 chr10:62735643-62735723 ( 47) GAGGAAGT 1 chr4:109935902-109935982 ( 41) GAGGAAGT 1 chr12:105143974-10514405 ( 20) GAGGAAGT 1 chr5:1191145-1191225 ( 31) GAGGAAGT 1 chr3:40449253-40449333 ( 45) GAGGAAGT 1 chr7:130760324-130760404 ( 21) GAGGAAGT 1 chr16:11302868-11302948 ( 13) GAGGAAGT 1 chr15:39646544-39646624 ( 44) GAGGAAGT 1 chr11:114133570-11413365 ( 50) GAGGAAGT 1 chr6:20223521-20223601 ( 32) GAGGAAGT 1 chr18:8601395-8601475 ( 42) GAGGAAGT 1 chr11:67886712-67886792 ( 34) GAGGAAGT 1 chr2:62372873-62372953 ( 22) GAGGAAGT 1 chr14:20961963-20962043 ( 53) GAGGAAGT 1 chr22:37256928-37257008 ( 65) GAGGAAGT 1 chr11:6668366-6668446 ( 49) GAGGAAGT 1 chr8:19756017-19756097 ( 30) GAGGAAGT 1 chrX:153947063-153947143 ( 55) GAGGAAGT 1 chr7:107279155-107279235 ( 52) GAGGAAGT 1 chr6:15683824-15683904 ( 18) GAGGAAGT 1 chr5:96240173-96240253 ( 23) GAGGAAGT 1 chr5:121358861-121358941 ( 28) GAGGAAGT 1 chr17:45277529-45277609 ( 58) GAGGAAGT 1 chr1:157481989-157482069 ( 52) GAGGAAGT 1 chr1:223351259-223351339 ( 42) GAGGAAGT 1 chr1:198101350-198101430 ( 33) GAGGAAGT 1 chr1:42372803-42372883 ( 14) GAGGAAGT 1 chr7:99474310-99474390 ( 38) GAGGAAGT 1 chr1:43409999-43410079 ( 21) GAGGAAGT 1 chr11:12688611-12688691 ( 62) GAGGAAGT 1 chr7:7908047-7908127 ( 52) GAGGAAGT 1 chr10:98524210-98524290 ( 28) GAGGAAGT 1 chrX:117748268-117748348 ( 52) GAGGAAGT 1 chr18:46242139-46242219 ( 39) GAGGAAGT 1 chr19:49619945-49620025 ( 18) GAGGAAGT 1 chr1:204468260-204468340 ( 34) GAGGAAGT 1 chr2:158999205-158999285 ( 36) GAGGAAGT 1 chr10:15527176-15527256 ( 44) GAGGAAGT 1 chr1:93994093-93994173 ( 37) GAGGAAGT 1 chr9:75646445-75646525 ( 24) GAGGAAGT 1 chr8:145052786-145052866 ( 36) GAGGAAGT 1 chr6:49605191-49605271 ( 39) GAGGAAGT 1 chr7:26369605-26369685 ( 36) GAGGAAGT 1 chr2:127395131-127395211 ( 45) GAGGAAGT 1 chr11:74033011-74033091 ( 35) GAGGAAGT 1 chr7:156573546-156573626 ( 53) GAGGAAGT 1 chr5:72233698-72233778 ( 34) GAGGAAGT 1 chr9:137297456-137297536 ( 46) GAGGAAGT 1 chr7:158488964-158489044 ( 26) GAGGAAGT 1 chr10:27825519-27825599 ( 23) GAGGAAGT 1 chr1:112158654-112158734 ( 49) GAGGAAGT 1 chr5:81126581-81126661 ( 49) GAGGAAGT 1 chr10:73006807-73006887 ( 28) GAGGAAGT 1 chrX:151304941-151305021 ( 53) GAGGAAGT 1 chr2:106356741-106356821 ( 47) GAGGAAGT 1 chr18:45497277-45497357 ( 19) GAGGAAGT 1 chr8:110378625-110378705 ( 52) GAGGAAGT 1 chr10:30876540-30876620 ( 26) GAGGAAGT 1 chr4:2772637-2772717 ( 34) GAGGAAGT 1 chr21:33394618-33394698 ( 57) GAGGAAGT 1 chr14:103040009-10304008 ( 49) GAGGAAGT 1 chr2:179041944-179042024 ( 27) GAGGAAGT 1 chr6:44232099-44232179 ( 65) GAGGAAGT 1 chr17:73567441-73567521 ( 25) GAGGAAGT 1 chr1:108586485-108586565 ( 34) GAGGAAGT 1 chr4:155406407-155406487 ( 51) GAGGAAGT 1 chr10:65458330-65458410 ( 36) GGGGAAGT 1 chr16:85605449-85605529 ( 28) GGGGAAGT 1 chr10:6110466-6110546 ( 36) GGGGAAGT 1 chr4:127568690-127568770 ( 20) GGGGAAGT 1 chr4:127937029-127937109 ( 30) GGGGAAGT 1 chr7:75261192-75261272 ( 49) GGGGAAGT 1 chr9:32899305-32899385 ( 24) GGGGAAGT 1 chr6:166756763-166756843 ( 51) GGGGAAGT 1 chr22:31886570-31886650 ( 17) GGGGAAGT 1 chr7:99966942-99967022 ( 47) GGGGAAGT 1 chr2:28762005-28762085 ( 47) GGGGAAGT 1 chr3:99979070-99979150 ( 35) GGGGAAGT 1 chr2:29223461-29223541 ( 33) GGGGAAGT 1 chr14:91591677-91591757 ( 38) GGGGAAGT 1 chr8:41427629-41427709 ( 36) GGGGAAGT 1 chr10:112262849-11226292 ( 47) GGGGAAGT 1 chr6:36660167-36660247 ( 26) GGGGAAGT 1 chr6:44537949-44538029 ( 25) GAGGAACT 1 chr12:124971872-12497195 ( 20) GAGGAACT 1 chr1:113256722-113256802 ( 33) GAGGAACT 1 chr1:234977646-234977726 ( 46) GAGGAACT 1 chr8:105342124-105342204 ( 52) GAGGAACT 1 chr17:29818533-29818613 ( 39) GAGGAACT 1 chr12:53350863-53350943 ( 16) CAGGAAGT 1 chr2:231576183-231576263 ( 14) CAGGAAGT 1 chr15:52053142-52053222 ( 51) CAGGAAGT 1 chr11:10846578-10846658 ( 27) CAGGAAGT 1 chr12:91983000-91983080 ( 61) AAGGAAGT 1 chr5:171061251-171061331 ( 61) AAGGAAGT 1 chr20:1357469-1357549 ( 17) GGGGAACT 1 chr3:32619394-32619474 ( 5) GGGGAACT 1 chr6:91169281-91169361 ( 48) CGGGAAGT 1 chr12:166012-166092 ( 43) CGGGAAGT 1 chr2:65455534-65455614 ( 45) AGGGAAGT 1 chr3:44087435-44087515 ( 12) AGGGAAGT 1 chr20:39126828-39126908 ( 34) AGGGAAGT 1 chr3:107821447-107821527 ( 48) AGGGAAGT 1 chr11:73695443-73695523 ( 20) AGGGAAGT 1 chr17:57790363-57790443 ( 37) AGGGAAGT 1 chr16:30177672-30177752 ( 63) AGGGAAGT 1 chr15:72487608-72487688 ( 20) GCGGAAGT 1 chr2:64488085-64488165 ( 39) GTGGAAGT 1 chr7:131304520-131304600 ( 2) GAGGAAGG 1 chr3:5079752-5079832 ( 4) GAGGAGGT 1 chr2:112761939-112762019 ( 62) GAGGAAGC 1 chr8:106407729-106407809 ( 14) GAGGGAGT 1 chr16:2737359-2737439 ( 24) GAGGAAAT 1 chr9:95805554-95805634 ( 22) CAGGAACT 1 chr5:86377479-86377559 ( 64) CAGGAACT 1 chr16:30564872-30564952 ( 25) CAGGAACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.10958 E= 2.8e-229 -206 -189 182 -1381 160 -506 -35 -522 -1381 -1381 201 -1381 -1381 -1381 201 -1381 193 -1381 -515 -1381 193 -1381 -515 -1381 -523 -160 189 -1381 -1381 -506 -515 193 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 144 E= 2.8e-229 0.062500 0.062500 0.875000 0.000000 0.791667 0.006944 0.194444 0.006944 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.993056 0.000000 0.006944 0.000000 0.993056 0.000000 0.006944 0.000000 0.006944 0.076389 0.916667 0.000000 0.000000 0.006944 0.006944 0.986111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAGGAAGT MEME-1 regular expression -------------------------------------------------------------------------------- GAGGAAGT -------------------------------------------------------------------------------- Time 4.67 secs. ******************************************************************************** ******************************************************************************** MOTIF CACTTCCT MEME-2 width = 8 sites = 126 llr = 1228 E-value = 1.0e-204 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :a:::::: pos.-specific C 9:9::aa2 probability G 1:1::::: matrix T :::aa::8 bits 2.1 ** 1.9 **** 1.7 ****** 1.5 ******* Relative 1.3 ******** Entropy 1.1 ******** (14.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CACTTCCT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:126258549-12625862 36 1.31e-05 CTCACCCGGC CACTTCCT CTTTTGCCCA chr4:52772598-52772678 24 1.31e-05 catttggatt cacttcct cttCTGATGT chr2:97322418-97322498 59 1.31e-05 tctgctcccc cacttcct cttttttttt chr5:169696045-169696125 37 1.31e-05 TCCTCCCTGA CACTTCCT CATTTTGCTC chr4:86647202-86647282 30 1.31e-05 CTCCAAGTAG CACTTCCT CTTTTCTAGT chr6:161591325-161591405 52 1.31e-05 gaccgaGAGA CACTTCCT CTTTACCGCC chr1:35384871-35384951 59 1.31e-05 CCCCAACTCC CACTTCCT CCTTTTCTTA chr12:124875975-12487605 41 1.31e-05 TGAGTCATGC CACTTCCT CATTTCAGAA chr7:131304520-131304600 37 1.31e-05 GAAACGATCT CACTTCCT CTTTTCTCCA chr2:169896379-169896459 25 1.31e-05 TCTTGAGACT CACTTCCT CTTTTTTTCA chr12:90321061-90321141 24 1.31e-05 TAGATTGTTT CACTTCCT CTTTCCTGGT chr7:142652089-142652169 54 1.31e-05 ttctgggtgt cacttcct ctttctgtaa chr10:114745823-11474590 41 1.31e-05 GAGCCTTAGC CACTTCCT CTTTCTTGGT chr6:39074978-39075058 34 1.31e-05 GAATTCCGTC CACTTCCT CTTTCTTCCT chr21:43481637-43481717 26 1.31e-05 ACCCAAGTCT CACTTCCT GTTTTCGGCC chr7:12624716-12624796 29 1.31e-05 AAACAgtctc cacttcct catttaccag chr12:32914793-32914873 14 1.31e-05 TTTTATTCTT CACTTCCT CTTTCTTCAT chr3:32619394-32619474 45 1.31e-05 ACTGCAGAAC CACTTCCT CTTTCTTTTG chr17:72474970-72475050 49 1.31e-05 GGAAGAAAAC CACTTCCT CTTTCCCATC chr3:193559875-193559955 39 1.31e-05 CTGATCATCT CACTTCCT CATTTGGCAA chr18:1308815-1308895 60 1.31e-05 agcaataagt cacttcct cttttatcct chr6:110836200-110836280 39 1.31e-05 cacgcctggc cacttcct ctttttttaa chr21:38737174-38737254 36 1.31e-05 CGCTCTGGGC CACTTCCT CTTTCTTCAA chr16:71126036-71126116 51 1.31e-05 TCCTTGAATG CACTTCCT CTTTTACTGT chr21:34439950-34440030 26 1.31e-05 CTTCCCCATT CACTTCCT CTTTCTGCTG chr12:91983000-91983080 25 1.31e-05 AAATTCACCT CACTTCCT CTTTTGGCTC chr1:161197521-161197601 39 1.31e-05 TCCCCTGAGG CACTTCCT CTTTCTCCTC chr7:8216998-8217078 28 1.31e-05 TAACTGGGTT CACTTCCT CTTTCAGGTC chr20:32064008-32064088 37 1.31e-05 CAGCCTTCAG cacttcct cattctggga chr12:54569367-54569447 37 1.31e-05 gagggctaat cacttcct cattcagtgt chr3:5079752-5079832 56 1.31e-05 gctaccacag cacttcct cttttgtctg chr16:30151267-30151347 25 1.31e-05 tgcacgtgtg cacttcct gttttcattc chrX:48559458-48559538 36 1.31e-05 gctggaaagg cacttcct cttctcattt chr22:37256928-37257008 27 1.31e-05 CCCGAGGGTC CACTTCCT CAATTTCTGT chr18:46402288-46402368 30 1.31e-05 TCAGATGCTC CACTTCCT CTTTTGCTCA chr7:112196912-112196992 47 1.31e-05 CTGAATCAAC CACTTCCT CTTTTGCACT chr3:150353420-150353500 36 1.31e-05 GTTTCTAGGG CACTTCCT GTTTTCTTTG chr7:24911557-24911637 37 1.31e-05 TTTTAAGGGC CACTTCCT CTTTTTCAGC chr2:102650049-102650129 38 1.31e-05 CTGCAAAACC CACTTCCT CATTCTTCAG chr4:24770378-24770458 54 1.31e-05 GTGAGAAAAG CACTTCCT CTTTTTGGAG chr5:108194872-108194952 20 1.31e-05 catagtatct caCTTCCT CTTTTCTTTA chr5:171061251-171061331 28 1.31e-05 tcctctgtcc cacttcct cattctcctg chr6:151501603-151501683 53 1.31e-05 tccccggtat cacttcct cttttttata chr6:35361962-35362042 55 1.31e-05 GCAGCTCGGC CACTTCCT GTTTTCTTCG chr8:105476594-105476674 34 1.31e-05 CACAGCATTC CACTTCCT CTTCTTTGCT chr12:53649933-53650013 35 1.31e-05 GCAATAACTC CACTTCCT CTTTCTGCCC chr12:49923363-49923443 47 1.31e-05 CTTCTCTTTC CACTTCCT CTTTCAGACA chr11:59831741-59831821 59 1.31e-05 GGGTAAGTAG CACTTCCT CTTTTTCTAT chr9:124822915-124822995 47 1.31e-05 ttgtgcaaac cacttcct ctttctgggt chr10:15231651-15231731 50 1.31e-05 TAGCCTTCTG CACTTCCT CTTTCTCTCC chr7:139994423-139994503 24 1.31e-05 aagtacaaag cacttcct ctttcataat chr5:149438489-149438569 26 1.31e-05 tgaatctccc cacttcct ctctttggTT chr2:112761939-112762019 29 1.31e-05 gtggtggggc cacttcct catttgagga chr2:225503123-225503203 49 1.31e-05 TAAACTTCAG CACTTCCT CATTTTGGCT chr20:61609446-61609526 25 1.31e-05 CCTCCTGGCG CACTTCCT CTTTCTGGTT chr3:72572673-72572753 49 1.31e-05 TGTCCCATGT CACTTCCT CTTTCCCTCC chr21:15680723-15680803 59 1.31e-05 AGGAGGTCAG CACTTCCT CTTTTCATTC chr18:22805288-22805368 26 1.31e-05 TCTGCAGCTC CACTTCCT CTTTCTGCAC chr3:115757496-115757576 30 1.31e-05 AGTCACTTAG CACTTCCT CTTTTAATTG chr22:42958558-42958638 40 1.31e-05 gctgcagctc cacttcct cttttgaata chr7:130689292-130689372 43 1.31e-05 AGTCCTGGTG CACTTCCT CATTTCTGAC chr7:158488964-158489044 59 1.31e-05 ttctgaaggc cacttcct caatattccg chr2:196444970-196445050 13 1.31e-05 TTAACAATGG CACTTCCT GTTTTGTCCT chr2:146529261-146529341 29 1.31e-05 catcttaagc cacttcct cttttgcttt chrX:151304941-151305021 11 1.31e-05 GATCTGAGGC CACTTCCT TAAACCAAGG chr12:104500870-10450095 33 1.31e-05 actgtctcgg cacttcct catttttgta chr19:7952665-7952745 58 1.31e-05 AGCCCTTCCG CACttcct ctttttcttt chr5:131803502-131803582 46 1.31e-05 ATTTAGTTTT CACTTCCT CTTTCTTGAC chr21:33394618-33394698 32 1.31e-05 ATTTCTTAAC CACTTCCT CTTTTTGAGT chr19:56833401-56833481 32 1.31e-05 AGTGCACAGC CACTTCCT CTTTCTTCTC chr10:70809497-70809577 38 1.31e-05 GAAAGCCCAG CACTTCCT CTTTCTGGAA chr8:106407729-106407809 35 1.31e-05 CTAGCATAGC CACTTCCT CTTTCTAGGT chr6:154623406-154623486 46 1.31e-05 CAAATTTGCC CACTTCCT CTTTCTTGTG chr17:66494276-66494356 36 1.31e-05 gcagctggtg cacttcct cttttctctc chr1:230286182-230286262 32 1.31e-05 CAACTCCTTC CACTTCCT CTTTCTGCCC chr9:77703988-77704068 21 1.31e-05 GATCTTTAGC CACTTCCT CTTTTCTCAG chr12:58268043-58268123 31 1.31e-05 CTCTGTCCAC CACTTCCT CTTTTTGAAC chr7:107935211-107935291 36 2.49e-05 TCTTCCGAAT CACTTCCC CTTTTTTGGA chr1:186035740-186035820 30 2.49e-05 CTCTGGCAAG CACTTCCC TTTTTCTAGG chr10:33294259-33294339 42 2.49e-05 ATGTTTGCAA CACTTCCC TTTTCTGCTG chr19:47366389-47366469 37 2.49e-05 CCCCATTGAG CACTTCCC CTTTCAGGCA chr6:14982420-14982500 48 2.49e-05 ttctgtagag cacttccc tttttctgtc chr1:154130995-154131075 21 2.49e-05 ACTTTTCTTT CACTTCCC TTTTTTCCAC chr12:113841861-11384194 48 2.49e-05 TCCCTCTTTC CACTTCCC CTTTCTGTCC chr3:31503566-31503646 21 2.49e-05 ttcagcccta cacttccc cttttatgcc chr5:86377479-86377559 43 2.49e-05 GGCGGTTCAC CACTTCCC CTTTTTCAAC chrX:153947063-153947143 31 2.49e-05 AACTTTGTTG CACTTCCC AAAAATGATT chr5:148929543-148929623 39 2.49e-05 TGCCTCTACC CACTTCCC CATTCCGTGC chr4:26938946-26939026 22 2.49e-05 AGTGTGTCTG CACTTCCC TTTTTCAGTT chr2:43333239-43333319 38 2.49e-05 AATGCAGCCA CACTTCCC CTTTTGAGCC chr6:130427627-130427707 47 2.49e-05 CCCTTTCTGC CACTTCCC CTTTTTGCGG chr5:176748069-176748149 39 2.49e-05 CTTGATAAAC CACTTCCC CTTTTCCTTC chr10:112477879-11247795 44 2.49e-05 cagaagccag cacttccc ctttttgttt chr16:50315975-50316055 22 2.49e-05 CCAAGGTCCC CACTTCCC CTTTTTGAGG chr6:44232099-44232179 43 2.49e-05 CTCTAGCCCT CACTTCCC CTTTCTTAGC chr1:206329078-206329158 36 2.49e-05 ACATGCCTGC CACTTCCC CTTTTCAATC chr1:22251180-22251260 21 3.89e-05 CTATCTTGGG GACTTCCT CTTATTCTTT chr10:75950073-75950153 21 3.89e-05 ccatagcctt gacttcct gttttgccga chr16:68281401-68281481 43 3.89e-05 CAGATCTGGT GACTTCCT CTTTTACCAT chr9:101962590-101962670 31 3.89e-05 TCCTTTTCCT GACTTCCT CTTTTTCACC chr1:246734821-246734901 25 3.89e-05 CGTCTCTTAG GACTTCCT GTTTTTCATC chr21:36318735-36318815 56 3.89e-05 tctccaggaa gacttccT CTTTTGGTGA chr2:64701570-64701650 55 3.89e-05 ATGAATGCAA GACTTCCT CTTTTCTGCT chr1:52016873-52016953 49 3.89e-05 GGTCAACAAG GACTTCCT CATTTTTACC chr1:207110945-207111025 49 3.89e-05 CTTGTACAAG GACTTCCT CTTTTGAGCA chr3:186743051-186743131 42 5.30e-05 GGAGGTGAGA CAGTTCCT CTTTCTGAGG chr2:71299269-71299349 53 5.30e-05 gtttgaatcc cagttcct gttttgcctg chr2:218113534-218113614 57 5.30e-05 TTGCAGTCTG CAGTTCCT CTTTTTGCTC chr4:139697134-139697214 23 5.30e-05 ACCCTTCCCC CAGTTCCT CTTTCGAGTA chr2:61023866-61023946 55 5.30e-05 CCAGGCATGG CAGTTCCT CTTTTCCTGT chr11:12688611-12688691 38 5.30e-05 AAAGCAGCTC CAGTTCCT CTTTTGTGGT chr4:74047142-74047222 21 5.30e-05 CCTTTAATTC CAGTTCCT CTTTTTCCAA chr16:2737359-2737439 47 5.30e-05 CGCTGCAGGG CAGTTCCT CTTTCTGGCC chr6:20223521-20223601 2 7.86e-05 c ctcttcct tccccagccc chr14:20961963-20962043 4 7.86e-05 TCA CTCTTCCT CAAAACTGCT chrX:39350868-39350948 55 7.86e-05 TGCAAAGTGC CACTTCCG CTTTTGAACA chr5:131823805-131823885 22 9.12e-05 AGAAAAGGCT GACTTCCC CTTTTTTCCC chr6:36660167-36660247 1 1.16e-04 . CACTGCCT GCTCAATACA chr9:137297456-137297536 58 1.31e-04 GGAAGTGCGT GAGTTCCT TTCCTTTGTG chr7:100485354-100485434 54 1.46e-04 GTTTTTTAAC AACTTCCT CACTGATGCT chr2:231576183-231576263 59 1.72e-04 TCTTCCTCAT CTCTTCCC CTATCTGGGG chr11:74033011-74033091 61 1.72e-04 CTACGGAAGC CACTTTCT TTGGCAAAAT chr19:39155372-39155452 11 2.11e-04 ACCTGGTTAA GACTTCCG GGGAGGCCCT chr16:11913785-11913865 51 2.11e-04 GTTCCTTGGA GACTTCCG CTTTTTCGTA chr5:169785339-169785419 72 2.39e-04 CAGTGACACA CTGTTCCT C chr16:11302868-11302948 37 2.92e-04 GGAATTTCAT GACTGCCT GGACATGTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:126258549-12625862 1.3e-05 35_[+2]_37 chr4:52772598-52772678 1.3e-05 23_[+2]_49 chr2:97322418-97322498 1.3e-05 58_[+2]_14 chr5:169696045-169696125 1.3e-05 36_[+2]_36 chr4:86647202-86647282 1.3e-05 29_[+2]_43 chr6:161591325-161591405 1.3e-05 51_[+2]_21 chr1:35384871-35384951 1.3e-05 58_[+2]_14 chr12:124875975-12487605 1.3e-05 40_[+2]_32 chr7:131304520-131304600 1.3e-05 36_[+2]_36 chr2:169896379-169896459 1.3e-05 24_[+2]_48 chr12:90321061-90321141 1.3e-05 23_[+2]_49 chr7:142652089-142652169 1.3e-05 53_[+2]_19 chr10:114745823-11474590 1.3e-05 40_[+2]_32 chr6:39074978-39075058 1.3e-05 33_[+2]_39 chr21:43481637-43481717 1.3e-05 25_[+2]_47 chr7:12624716-12624796 1.3e-05 28_[+2]_44 chr12:32914793-32914873 1.3e-05 13_[+2]_59 chr3:32619394-32619474 1.3e-05 44_[+2]_28 chr17:72474970-72475050 1.3e-05 48_[+2]_24 chr3:193559875-193559955 1.3e-05 38_[+2]_34 chr18:1308815-1308895 1.3e-05 59_[+2]_13 chr6:110836200-110836280 1.3e-05 38_[+2]_34 chr21:38737174-38737254 1.3e-05 35_[+2]_37 chr16:71126036-71126116 1.3e-05 50_[+2]_22 chr21:34439950-34440030 1.3e-05 25_[+2]_47 chr12:91983000-91983080 1.3e-05 24_[+2]_48 chr1:161197521-161197601 1.3e-05 38_[+2]_34 chr7:8216998-8217078 1.3e-05 27_[+2]_45 chr20:32064008-32064088 1.3e-05 36_[+2]_36 chr12:54569367-54569447 1.3e-05 36_[+2]_36 chr3:5079752-5079832 1.3e-05 55_[+2]_17 chr16:30151267-30151347 1.3e-05 24_[+2]_48 chrX:48559458-48559538 1.3e-05 35_[+2]_37 chr22:37256928-37257008 1.3e-05 26_[+2]_46 chr18:46402288-46402368 1.3e-05 29_[+2]_43 chr7:112196912-112196992 1.3e-05 46_[+2]_26 chr3:150353420-150353500 1.3e-05 35_[+2]_37 chr7:24911557-24911637 1.3e-05 36_[+2]_36 chr2:102650049-102650129 1.3e-05 37_[+2]_35 chr4:24770378-24770458 1.3e-05 53_[+2]_19 chr5:108194872-108194952 1.3e-05 19_[+2]_53 chr5:171061251-171061331 1.3e-05 27_[+2]_45 chr6:151501603-151501683 1.3e-05 52_[+2]_20 chr6:35361962-35362042 1.3e-05 54_[+2]_18 chr8:105476594-105476674 1.3e-05 33_[+2]_39 chr12:53649933-53650013 1.3e-05 34_[+2]_38 chr12:49923363-49923443 1.3e-05 46_[+2]_26 chr11:59831741-59831821 1.3e-05 58_[+2]_14 chr9:124822915-124822995 1.3e-05 46_[+2]_26 chr10:15231651-15231731 1.3e-05 49_[+2]_23 chr7:139994423-139994503 1.3e-05 23_[+2]_49 chr5:149438489-149438569 1.3e-05 25_[+2]_47 chr2:112761939-112762019 1.3e-05 28_[+2]_44 chr2:225503123-225503203 1.3e-05 48_[+2]_24 chr20:61609446-61609526 1.3e-05 24_[+2]_48 chr3:72572673-72572753 1.3e-05 48_[+2]_24 chr21:15680723-15680803 1.3e-05 58_[+2]_14 chr18:22805288-22805368 1.3e-05 25_[+2]_47 chr3:115757496-115757576 1.3e-05 29_[+2]_43 chr22:42958558-42958638 1.3e-05 39_[+2]_33 chr7:130689292-130689372 1.3e-05 42_[+2]_30 chr7:158488964-158489044 1.3e-05 58_[+2]_14 chr2:196444970-196445050 1.3e-05 12_[+2]_60 chr2:146529261-146529341 1.3e-05 28_[+2]_44 chrX:151304941-151305021 1.3e-05 10_[+2]_62 chr12:104500870-10450095 1.3e-05 32_[+2]_40 chr19:7952665-7952745 1.3e-05 57_[+2]_15 chr5:131803502-131803582 1.3e-05 45_[+2]_27 chr21:33394618-33394698 1.3e-05 31_[+2]_41 chr19:56833401-56833481 1.3e-05 31_[+2]_41 chr10:70809497-70809577 1.3e-05 37_[+2]_35 chr8:106407729-106407809 1.3e-05 34_[+2]_38 chr6:154623406-154623486 1.3e-05 45_[+2]_27 chr17:66494276-66494356 1.3e-05 35_[+2]_37 chr1:230286182-230286262 1.3e-05 31_[+2]_41 chr9:77703988-77704068 1.3e-05 20_[+2]_52 chr12:58268043-58268123 1.3e-05 30_[+2]_42 chr7:107935211-107935291 2.5e-05 35_[+2]_37 chr1:186035740-186035820 2.5e-05 29_[+2]_43 chr10:33294259-33294339 2.5e-05 41_[+2]_31 chr19:47366389-47366469 2.5e-05 36_[+2]_36 chr6:14982420-14982500 2.5e-05 47_[+2]_25 chr1:154130995-154131075 2.5e-05 20_[+2]_52 chr12:113841861-11384194 2.5e-05 47_[+2]_25 chr3:31503566-31503646 2.5e-05 20_[+2]_52 chr5:86377479-86377559 2.5e-05 42_[+2]_30 chrX:153947063-153947143 2.5e-05 30_[+2]_42 chr5:148929543-148929623 2.5e-05 38_[+2]_34 chr4:26938946-26939026 2.5e-05 21_[+2]_51 chr2:43333239-43333319 2.5e-05 37_[+2]_35 chr6:130427627-130427707 2.5e-05 46_[+2]_26 chr5:176748069-176748149 2.5e-05 38_[+2]_34 chr10:112477879-11247795 2.5e-05 43_[+2]_29 chr16:50315975-50316055 2.5e-05 21_[+2]_51 chr6:44232099-44232179 2.5e-05 42_[+2]_30 chr1:206329078-206329158 2.5e-05 35_[+2]_37 chr1:22251180-22251260 3.9e-05 20_[+2]_52 chr10:75950073-75950153 3.9e-05 20_[+2]_52 chr16:68281401-68281481 3.9e-05 42_[+2]_30 chr9:101962590-101962670 3.9e-05 30_[+2]_42 chr1:246734821-246734901 3.9e-05 24_[+2]_48 chr21:36318735-36318815 3.9e-05 55_[+2]_17 chr2:64701570-64701650 3.9e-05 54_[+2]_18 chr1:52016873-52016953 3.9e-05 48_[+2]_24 chr1:207110945-207111025 3.9e-05 48_[+2]_24 chr3:186743051-186743131 5.3e-05 41_[+2]_31 chr2:71299269-71299349 5.3e-05 52_[+2]_20 chr2:218113534-218113614 5.3e-05 56_[+2]_16 chr4:139697134-139697214 5.3e-05 22_[+2]_50 chr2:61023866-61023946 5.3e-05 54_[+2]_18 chr11:12688611-12688691 5.3e-05 37_[+2]_35 chr4:74047142-74047222 5.3e-05 20_[+2]_52 chr16:2737359-2737439 5.3e-05 46_[+2]_26 chr6:20223521-20223601 7.9e-05 1_[+2]_71 chr14:20961963-20962043 7.9e-05 3_[+2]_69 chrX:39350868-39350948 7.9e-05 54_[+2]_18 chr5:131823805-131823885 9.1e-05 21_[+2]_51 chr6:36660167-36660247 0.00012 [+2]_72 chr9:137297456-137297536 0.00013 57_[+2]_15 chr7:100485354-100485434 0.00015 53_[+2]_19 chr2:231576183-231576263 0.00017 58_[+2]_14 chr11:74033011-74033091 0.00017 60_[+2]_12 chr19:39155372-39155452 0.00021 10_[+2]_62 chr16:11913785-11913865 0.00021 50_[+2]_22 chr5:169785339-169785419 0.00024 71_[+2]_1 chr16:11302868-11302948 0.00029 36_[+2]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACTTCCT width=8 seqs=126 chr10:126258549-12625862 ( 36) CACTTCCT 1 chr4:52772598-52772678 ( 24) CACTTCCT 1 chr2:97322418-97322498 ( 59) CACTTCCT 1 chr5:169696045-169696125 ( 37) CACTTCCT 1 chr4:86647202-86647282 ( 30) CACTTCCT 1 chr6:161591325-161591405 ( 52) CACTTCCT 1 chr1:35384871-35384951 ( 59) CACTTCCT 1 chr12:124875975-12487605 ( 41) CACTTCCT 1 chr7:131304520-131304600 ( 37) CACTTCCT 1 chr2:169896379-169896459 ( 25) CACTTCCT 1 chr12:90321061-90321141 ( 24) CACTTCCT 1 chr7:142652089-142652169 ( 54) CACTTCCT 1 chr10:114745823-11474590 ( 41) CACTTCCT 1 chr6:39074978-39075058 ( 34) CACTTCCT 1 chr21:43481637-43481717 ( 26) CACTTCCT 1 chr7:12624716-12624796 ( 29) CACTTCCT 1 chr12:32914793-32914873 ( 14) CACTTCCT 1 chr3:32619394-32619474 ( 45) CACTTCCT 1 chr17:72474970-72475050 ( 49) CACTTCCT 1 chr3:193559875-193559955 ( 39) CACTTCCT 1 chr18:1308815-1308895 ( 60) CACTTCCT 1 chr6:110836200-110836280 ( 39) CACTTCCT 1 chr21:38737174-38737254 ( 36) CACTTCCT 1 chr16:71126036-71126116 ( 51) CACTTCCT 1 chr21:34439950-34440030 ( 26) CACTTCCT 1 chr12:91983000-91983080 ( 25) CACTTCCT 1 chr1:161197521-161197601 ( 39) CACTTCCT 1 chr7:8216998-8217078 ( 28) CACTTCCT 1 chr20:32064008-32064088 ( 37) CACTTCCT 1 chr12:54569367-54569447 ( 37) CACTTCCT 1 chr3:5079752-5079832 ( 56) CACTTCCT 1 chr16:30151267-30151347 ( 25) CACTTCCT 1 chrX:48559458-48559538 ( 36) CACTTCCT 1 chr22:37256928-37257008 ( 27) CACTTCCT 1 chr18:46402288-46402368 ( 30) CACTTCCT 1 chr7:112196912-112196992 ( 47) CACTTCCT 1 chr3:150353420-150353500 ( 36) CACTTCCT 1 chr7:24911557-24911637 ( 37) CACTTCCT 1 chr2:102650049-102650129 ( 38) CACTTCCT 1 chr4:24770378-24770458 ( 54) CACTTCCT 1 chr5:108194872-108194952 ( 20) CACTTCCT 1 chr5:171061251-171061331 ( 28) CACTTCCT 1 chr6:151501603-151501683 ( 53) CACTTCCT 1 chr6:35361962-35362042 ( 55) CACTTCCT 1 chr8:105476594-105476674 ( 34) CACTTCCT 1 chr12:53649933-53650013 ( 35) CACTTCCT 1 chr12:49923363-49923443 ( 47) CACTTCCT 1 chr11:59831741-59831821 ( 59) CACTTCCT 1 chr9:124822915-124822995 ( 47) CACTTCCT 1 chr10:15231651-15231731 ( 50) CACTTCCT 1 chr7:139994423-139994503 ( 24) CACTTCCT 1 chr5:149438489-149438569 ( 26) CACTTCCT 1 chr2:112761939-112762019 ( 29) CACTTCCT 1 chr2:225503123-225503203 ( 49) CACTTCCT 1 chr20:61609446-61609526 ( 25) CACTTCCT 1 chr3:72572673-72572753 ( 49) CACTTCCT 1 chr21:15680723-15680803 ( 59) CACTTCCT 1 chr18:22805288-22805368 ( 26) CACTTCCT 1 chr3:115757496-115757576 ( 30) CACTTCCT 1 chr22:42958558-42958638 ( 40) CACTTCCT 1 chr7:130689292-130689372 ( 43) CACTTCCT 1 chr7:158488964-158489044 ( 59) CACTTCCT 1 chr2:196444970-196445050 ( 13) CACTTCCT 1 chr2:146529261-146529341 ( 29) CACTTCCT 1 chrX:151304941-151305021 ( 11) CACTTCCT 1 chr12:104500870-10450095 ( 33) CACTTCCT 1 chr19:7952665-7952745 ( 58) CACTTCCT 1 chr5:131803502-131803582 ( 46) CACTTCCT 1 chr21:33394618-33394698 ( 32) CACTTCCT 1 chr19:56833401-56833481 ( 32) CACTTCCT 1 chr10:70809497-70809577 ( 38) CACTTCCT 1 chr8:106407729-106407809 ( 35) CACTTCCT 1 chr6:154623406-154623486 ( 46) CACTTCCT 1 chr17:66494276-66494356 ( 36) CACTTCCT 1 chr1:230286182-230286262 ( 32) CACTTCCT 1 chr9:77703988-77704068 ( 21) CACTTCCT 1 chr12:58268043-58268123 ( 31) CACTTCCT 1 chr7:107935211-107935291 ( 36) CACTTCCC 1 chr1:186035740-186035820 ( 30) CACTTCCC 1 chr10:33294259-33294339 ( 42) CACTTCCC 1 chr19:47366389-47366469 ( 37) CACTTCCC 1 chr6:14982420-14982500 ( 48) CACTTCCC 1 chr1:154130995-154131075 ( 21) CACTTCCC 1 chr12:113841861-11384194 ( 48) CACTTCCC 1 chr3:31503566-31503646 ( 21) CACTTCCC 1 chr5:86377479-86377559 ( 43) CACTTCCC 1 chrX:153947063-153947143 ( 31) CACTTCCC 1 chr5:148929543-148929623 ( 39) CACTTCCC 1 chr4:26938946-26939026 ( 22) CACTTCCC 1 chr2:43333239-43333319 ( 38) CACTTCCC 1 chr6:130427627-130427707 ( 47) CACTTCCC 1 chr5:176748069-176748149 ( 39) CACTTCCC 1 chr10:112477879-11247795 ( 44) CACTTCCC 1 chr16:50315975-50316055 ( 22) CACTTCCC 1 chr6:44232099-44232179 ( 43) CACTTCCC 1 chr1:206329078-206329158 ( 36) CACTTCCC 1 chr1:22251180-22251260 ( 21) GACTTCCT 1 chr10:75950073-75950153 ( 21) GACTTCCT 1 chr16:68281401-68281481 ( 43) GACTTCCT 1 chr9:101962590-101962670 ( 31) GACTTCCT 1 chr1:246734821-246734901 ( 25) GACTTCCT 1 chr21:36318735-36318815 ( 56) GACTTCCT 1 chr2:64701570-64701650 ( 55) GACTTCCT 1 chr1:52016873-52016953 ( 49) GACTTCCT 1 chr1:207110945-207111025 ( 49) GACTTCCT 1 chr3:186743051-186743131 ( 42) CAGTTCCT 1 chr2:71299269-71299349 ( 53) CAGTTCCT 1 chr2:218113534-218113614 ( 57) CAGTTCCT 1 chr4:139697134-139697214 ( 23) CAGTTCCT 1 chr2:61023866-61023946 ( 55) CAGTTCCT 1 chr11:12688611-12688691 ( 38) CAGTTCCT 1 chr4:74047142-74047222 ( 21) CAGTTCCT 1 chr16:2737359-2737439 ( 47) CAGTTCCT 1 chr6:20223521-20223601 ( 2) CTCTTCCT 1 chr14:20961963-20962043 ( 4) CTCTTCCT 1 chrX:39350868-39350948 ( 55) CACTTCCG 1 chr5:131823805-131823885 ( 22) GACTTCCC 1 chr6:36660167-36660247 ( 1) CACTGCCT 1 chr9:137297456-137297536 ( 58) GAGTTCCT 1 chr7:100485354-100485434 ( 54) AACTTCCT 1 chr2:231576183-231576263 ( 59) CTCTTCCC 1 chr11:74033011-74033091 ( 61) CACTTTCT 1 chr19:39155372-39155452 ( 11) GACTTCCG 1 chr16:11913785-11913865 ( 51) GACTTCCG 1 chr5:169785339-169785419 ( 72) CTGTTCCT 1 chr16:11302868-11302948 ( 37) GACTGCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.89406 E= 1.0e-204 -504 192 -116 -1362 189 -1362 -1362 -303 -1362 199 -164 -1362 -1362 -1362 -1362 195 -1362 -1362 -396 193 -1362 209 -1362 -502 -1362 211 -1362 -1362 -1362 -48 -338 165 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 126 E= 1.0e-204 0.007937 0.880952 0.111111 0.000000 0.968254 0.000000 0.000000 0.031746 0.000000 0.920635 0.079365 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.015873 0.984127 0.000000 0.992063 0.000000 0.007937 0.000000 1.000000 0.000000 0.000000 0.000000 0.166667 0.023810 0.809524 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTCCT MEME-2 regular expression -------------------------------------------------------------------------------- CACTTCCT -------------------------------------------------------------------------------- Time 7.97 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTTCTKN MEME-3 width = 8 sites = 83 llr = 585 E-value = 1.2e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::1:2 pos.-specific C 8:::7:23 probability G ::::::42 matrix T 2aaa3942 bits 2.1 1.9 ** 1.7 *** 1.5 *** * Relative 1.3 ****** Entropy 1.1 ****** (10.2 bits) 0.8 ****** 0.6 ****** 0.4 ******* 0.2 ******* 0.0 -------- Multilevel CTTTCTGC consensus T T TT sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr21:34439950-34440030 34 1.39e-05 TTCACTTCCT CTTTCTGC TGGCAGGGTA chr12:53649933-53650013 43 1.39e-05 TCCACTTCCT CTTTCTGC CCTGTTGGGC chr18:22805288-22805368 34 1.39e-05 TCCACTTCCT CTTTCTGC ACTTGCTCGG chr6:130427627-130427707 39 1.39e-05 TTGAGCCTCC CTTTCTGC CACTTCCCCT chr1:230286182-230286262 40 1.39e-05 TCCACTTCCT CTTTCTGC CCGCTTTGTT chr6:39074978-39075058 42 2.85e-05 TCCACTTCCT CTTTCTTC CTTAACTCTT chr12:32914793-32914873 22 2.85e-05 TTCACTTCCT CTTTCTTC ATTTCCTCTT chr21:38737174-38737254 44 2.85e-05 GCCACTTCCT CTTTCTTC AAAACAATTA chr19:56833401-56833481 40 2.85e-05 GCCACTTCCT CTTTCTTC TCCTCCCATA chr7:142652089-142652169 62 4.40e-05 gtcacttcct ctttctgt aaatactgcc chr12:113841861-11384194 56 4.40e-05 TCCACTTCCC CTTTCTGT CCTCAGTTTC chr12:104500870-10450095 68 4.40e-05 tcataccatg ctttctgt ccatc chr3:186743051-186743131 50 9.09e-05 GACAGTTCCT CTTTCTGA GGAGATGGCG chr3:32619394-32619474 53 9.09e-05 ACCACTTCCT CTTTCTTT TGGGGATGCC chr19:47366389-47366469 58 9.09e-05 TCAGGCATAT CTTTCTTT CCATCCCTCT chr7:24911557-24911637 62 9.09e-05 AGCAAAAATC CTTTCTGA ACTGGTGGCT chr9:124822915-124822995 55 9.09e-05 accacttcct ctttctgg gtatcctcat chr20:61609446-61609526 33 9.09e-05 CGCACTTCCT CTTTCTGG TTTTAGGATG chr3:72572673-72572753 21 9.09e-05 TTCTGCTTTC CTTTCTGG CAGTAGAAGC chr7:158488964-158489044 47 9.09e-05 agctgccaaa ctttctga aggccacttc chr16:2737359-2737439 55 9.09e-05 GGCAGTTCCT CTTTCTGG CCCTGCAGAT chr10:70809497-70809577 46 9.09e-05 AGCACTTCCT CTTTCTGG AAGTTGTAGT chr10:114745823-11474590 49 1.36e-04 GCCACTTCCT CTTTCTTG GTGGTTATGT chr5:169766106-169766186 16 1.36e-04 CTCTGCAGGA CTTTCTCC CCATCAAGAA chr1:161197521-161197601 47 1.36e-04 GGCACTTCCT CTTTCTCC TCCACGGGTT chr7:112196912-112196992 24 1.36e-04 GTCATGAAGG CTTTCTTG CCAGGCTGAA chr5:131803502-131803582 54 1.36e-04 TTCACTTCCT CTTTCTTG ACCTCCTCCC chr6:44232099-44232179 51 1.36e-04 CTCACTTCCC CTTTCTTA GCAGAGGAGG chr6:154623406-154623486 54 1.36e-04 CCCACTTCCT CTTTCTTG TGTGCTTTAT chr2:218113534-218113614 65 1.51e-04 TGCAGTTCCT CTTTTTGC TCACTGAC chr2:196444970-196445050 72 1.51e-04 TGGACTTCTC CTTTTTGC A chr5:131823805-131823885 30 1.68e-04 CTGACTTCCC CTTTTTTC CCCTGACATC chr5:169785339-169785419 30 1.68e-04 GGCTGTTCCT CTTTTTTC GAGGCAAAAC chr10:15231651-15231731 58 1.82e-04 TGCACTTCCT CTTTCTCT CCATTTGGGT chr10:33294259-33294339 50 2.26e-04 AACACTTCCC TTTTCTGC TGTTTGAATC chr2:64701570-64701650 64 2.26e-04 AGACTTCCTC TTTTCTGC TCTTTATCT chr10:65458330-65458410 3 2.60e-04 AT TTTTCTTC TTGTGAGGAG chr6:35361962-35362042 64 2.60e-04 CCACTTCCTG TTTTCTTC GGCTGTATG chr5:121358861-121358941 58 2.60e-04 acacataacT TTTTCTTC CAGTGACCAG chr10:112477879-11247795 52 2.60e-04 agcacttccc ctttttgt ttcagcaact chr2:97322418-97322498 67 3.12e-04 cccacttcct cttttttt tttttt chr2:169896379-169896459 33 3.12e-04 CTCACTTCCT CTTTTTTT CACACTTCCA chr9:32899305-32899385 3 3.12e-04 GC CTTTTTGA AGGGGCACAA chr6:110836200-110836280 47 3.12e-04 gccacttcct cttttttt aattgatgcc chr4:24770378-24770458 62 3.12e-04 AGCACTTCCT CTTTTTGG AGCTTGGTCT chr9:75646445-75646525 13 3.12e-04 ggtttgtgta ctttttga aaagaggaag chr19:7952665-7952745 72 3.12e-04 tcctcttttt cttttttt t chr21:33394618-33394698 40 3.12e-04 ACCACTTCCT CTTTTTGA GTGGAATTAG chr16:50315975-50316055 30 3.12e-04 CCCACTTCCC CTTTTTGA GGCCAACAGG chr1:108586485-108586565 16 3.12e-04 tcccgcatga ctttttgg cagcaaaaaa chr12:58268043-58268123 39 3.12e-04 ACCACTTCCT CTTTTTGA ACTCTCTCTA chr19:39155372-39155452 61 3.62e-04 CTGCCTTCCT CTTTTTTG AAAGGCATAG chr7:107935211-107935291 44 3.62e-04 ATCACTTCCC CTTTTTTG GACATGCTTA chr6:151501603-151501683 61 3.62e-04 atcacttcct ctttttta taaggacacc chr4:74047142-74047222 29 3.62e-04 TCCAGTTCCT CTTTTTCC AACTAGAAAG chr6:14982420-14982500 57 3.80e-04 gcacttccct ttttctgt ccataaattt chr1:154130995-154131075 13 4.32e-04 ATCCCACAAC TTTTCTTT CACTTCCCTT chr3:150353420-150353500 45 4.32e-04 GCACTTCCTG TTTTCTTT GAACTTGTGT chr5:108194872-108194952 29 4.32e-04 tcaCTTCCTC TTTTCTTT AACTCTTACA chr7:7908047-7908127 73 4.32e-04 GAGAACATTT TTTTCTTT chr13:113238028-11323810 65 4.32e-04 ACACTTCTGC TTTTCTGA AGGATGGG chr1:35384871-35384951 69 4.82e-04 CACTTCCTCC TTTTCTTA GCAG chr7:131304520-131304600 46 4.82e-04 TCACTTCCTC TTTTCTCC AGCTGAAATG chr7:130760324-130760404 73 4.82e-04 AGGTCAAAAG TTTTCTCC chr17:66494276-66494356 18 4.82e-04 GGGCCACAAG ttttcttg gcagctggtg chr11:59831741-59831821 67 4.99e-04 AGCACTTCCT CTTTTTCT ATGATC chr16:11913785-11913865 59 5.44e-04 GAGACTTCCG CTTTTTCG TATCACTCCT chr3:31503566-31503646 9 5.44e-04 tctgtcgt ctttcagc cctacacttc chr9:101962590-101962670 39 5.44e-04 CTGACTTCCT CTTTTTCA CCCTTAGCTC chr20:32064008-32064088 23 5.44e-04 TGGGTGTTCC CTTTCAGC CTTCAGcact chr5:86377479-86377559 51 5.44e-04 ACCACTTCCC CTTTTTCA ACATGCAGGA chr6:166756763-166756843 64 6.11e-04 GAAGTGGCAT TTTTCTCT CTCTCATTT chr9:77703988-77704068 30 6.43e-04 CCACTTCCTC TTTTCTCA GTGTTTGTCA chr1:22251180-22251260 73 6.71e-04 AAGCGAGTGT CTTCCTGC chr4:52772598-52772678 50 7.51e-04 GTGAGTCAGC CTTTCATT TGTTAGTTGA chr2:216676481-216676561 65 7.51e-04 ggaagtgaat ttttttgt ggtttaag chr7:8216998-8217078 36 7.51e-04 TTCACTTCCT CTTTCAGG TCATTAGTGG chr12:49923363-49923443 55 7.51e-04 TCCACTTCCT CTTTCAGA CAAATGTCTC chr7:139994423-139994503 32 8.54e-04 agcacttcct ctttcata atggaggtga chr2:225503123-225503203 27 8.54e-04 AGCCCTTAGT CTTTCATA GCAATAAACT chr4:86647202-86647282 16 1.05e-03 TTGAAAACTG CTTCCTCC AAGTAGCACT chr12:124971872-12497195 70 1.05e-03 TTAGGCAGAC CTTCCTCC TTT chr17:73567441-73567521 38 1.05e-03 gaagtgacag cttcctcc tagagcagct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:34439950-34440030 1.4e-05 33_[+3]_39 chr12:53649933-53650013 1.4e-05 42_[+3]_30 chr18:22805288-22805368 1.4e-05 33_[+3]_39 chr6:130427627-130427707 1.4e-05 38_[+3]_34 chr1:230286182-230286262 1.4e-05 39_[+3]_33 chr6:39074978-39075058 2.8e-05 41_[+3]_31 chr12:32914793-32914873 2.8e-05 21_[+3]_51 chr21:38737174-38737254 2.8e-05 43_[+3]_29 chr19:56833401-56833481 2.8e-05 39_[+3]_33 chr7:142652089-142652169 4.4e-05 61_[+3]_11 chr12:113841861-11384194 4.4e-05 55_[+3]_17 chr12:104500870-10450095 4.4e-05 67_[+3]_5 chr3:186743051-186743131 9.1e-05 49_[+3]_23 chr3:32619394-32619474 9.1e-05 52_[+3]_20 chr19:47366389-47366469 9.1e-05 57_[+3]_15 chr7:24911557-24911637 9.1e-05 61_[+3]_11 chr9:124822915-124822995 9.1e-05 54_[+3]_18 chr20:61609446-61609526 9.1e-05 32_[+3]_40 chr3:72572673-72572753 9.1e-05 20_[+3]_52 chr7:158488964-158489044 9.1e-05 46_[+3]_26 chr16:2737359-2737439 9.1e-05 54_[+3]_18 chr10:70809497-70809577 9.1e-05 45_[+3]_27 chr10:114745823-11474590 0.00014 48_[+3]_24 chr5:169766106-169766186 0.00014 15_[+3]_57 chr1:161197521-161197601 0.00014 46_[+3]_26 chr7:112196912-112196992 0.00014 23_[+3]_49 chr5:131803502-131803582 0.00014 53_[+3]_19 chr6:44232099-44232179 0.00014 50_[+3]_22 chr6:154623406-154623486 0.00014 53_[+3]_19 chr2:218113534-218113614 0.00015 64_[+3]_8 chr2:196444970-196445050 0.00015 71_[+3]_1 chr5:131823805-131823885 0.00017 29_[+3]_43 chr5:169785339-169785419 0.00017 29_[+3]_43 chr10:15231651-15231731 0.00018 57_[+3]_15 chr10:33294259-33294339 0.00023 49_[+3]_23 chr2:64701570-64701650 0.00023 63_[+3]_9 chr10:65458330-65458410 0.00026 2_[+3]_70 chr6:35361962-35362042 0.00026 63_[+3]_9 chr5:121358861-121358941 0.00026 57_[+3]_15 chr10:112477879-11247795 0.00026 51_[+3]_21 chr2:97322418-97322498 0.00031 66_[+3]_6 chr2:169896379-169896459 0.00031 32_[+3]_40 chr9:32899305-32899385 0.00031 2_[+3]_70 chr6:110836200-110836280 0.00031 46_[+3]_26 chr4:24770378-24770458 0.00031 61_[+3]_11 chr9:75646445-75646525 0.00031 12_[+3]_60 chr19:7952665-7952745 0.00031 71_[+3]_1 chr21:33394618-33394698 0.00031 39_[+3]_33 chr16:50315975-50316055 0.00031 29_[+3]_43 chr1:108586485-108586565 0.00031 15_[+3]_57 chr12:58268043-58268123 0.00031 38_[+3]_34 chr19:39155372-39155452 0.00036 60_[+3]_12 chr7:107935211-107935291 0.00036 43_[+3]_29 chr6:151501603-151501683 0.00036 60_[+3]_12 chr4:74047142-74047222 0.00036 28_[+3]_44 chr6:14982420-14982500 0.00038 56_[+3]_16 chr1:154130995-154131075 0.00043 12_[+3]_60 chr3:150353420-150353500 0.00043 44_[+3]_28 chr5:108194872-108194952 0.00043 28_[+3]_44 chr7:7908047-7908127 0.00043 72_[+3] chr13:113238028-11323810 0.00043 64_[+3]_8 chr1:35384871-35384951 0.00048 68_[+3]_4 chr7:131304520-131304600 0.00048 45_[+3]_27 chr7:130760324-130760404 0.00048 72_[+3] chr17:66494276-66494356 0.00048 17_[+3]_55 chr11:59831741-59831821 0.0005 66_[+3]_6 chr16:11913785-11913865 0.00054 58_[+3]_14 chr3:31503566-31503646 0.00054 8_[+3]_64 chr9:101962590-101962670 0.00054 38_[+3]_34 chr20:32064008-32064088 0.00054 22_[+3]_50 chr5:86377479-86377559 0.00054 50_[+3]_22 chr6:166756763-166756843 0.00061 63_[+3]_9 chr9:77703988-77704068 0.00064 29_[+3]_43 chr1:22251180-22251260 0.00067 72_[+3] chr4:52772598-52772678 0.00075 49_[+3]_23 chr2:216676481-216676561 0.00075 64_[+3]_8 chr7:8216998-8217078 0.00075 35_[+3]_37 chr12:49923363-49923443 0.00075 54_[+3]_18 chr7:139994423-139994503 0.00085 31_[+3]_41 chr2:225503123-225503203 0.00085 26_[+3]_46 chr4:86647202-86647282 0.0011 15_[+3]_57 chr12:124971872-12497195 0.0011 69_[+3]_3 chr17:73567441-73567521 0.0011 37_[+3]_35 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTTCTKN width=8 seqs=83 chr21:34439950-34440030 ( 34) CTTTCTGC 1 chr12:53649933-53650013 ( 43) CTTTCTGC 1 chr18:22805288-22805368 ( 34) CTTTCTGC 1 chr6:130427627-130427707 ( 39) CTTTCTGC 1 chr1:230286182-230286262 ( 40) CTTTCTGC 1 chr6:39074978-39075058 ( 42) CTTTCTTC 1 chr12:32914793-32914873 ( 22) CTTTCTTC 1 chr21:38737174-38737254 ( 44) CTTTCTTC 1 chr19:56833401-56833481 ( 40) CTTTCTTC 1 chr7:142652089-142652169 ( 62) CTTTCTGT 1 chr12:113841861-11384194 ( 56) CTTTCTGT 1 chr12:104500870-10450095 ( 68) CTTTCTGT 1 chr3:186743051-186743131 ( 50) CTTTCTGA 1 chr3:32619394-32619474 ( 53) CTTTCTTT 1 chr19:47366389-47366469 ( 58) CTTTCTTT 1 chr7:24911557-24911637 ( 62) CTTTCTGA 1 chr9:124822915-124822995 ( 55) CTTTCTGG 1 chr20:61609446-61609526 ( 33) CTTTCTGG 1 chr3:72572673-72572753 ( 21) CTTTCTGG 1 chr7:158488964-158489044 ( 47) CTTTCTGA 1 chr16:2737359-2737439 ( 55) CTTTCTGG 1 chr10:70809497-70809577 ( 46) CTTTCTGG 1 chr10:114745823-11474590 ( 49) CTTTCTTG 1 chr5:169766106-169766186 ( 16) CTTTCTCC 1 chr1:161197521-161197601 ( 47) CTTTCTCC 1 chr7:112196912-112196992 ( 24) CTTTCTTG 1 chr5:131803502-131803582 ( 54) CTTTCTTG 1 chr6:44232099-44232179 ( 51) CTTTCTTA 1 chr6:154623406-154623486 ( 54) CTTTCTTG 1 chr2:218113534-218113614 ( 65) CTTTTTGC 1 chr2:196444970-196445050 ( 72) CTTTTTGC 1 chr5:131823805-131823885 ( 30) CTTTTTTC 1 chr5:169785339-169785419 ( 30) CTTTTTTC 1 chr10:15231651-15231731 ( 58) CTTTCTCT 1 chr10:33294259-33294339 ( 50) TTTTCTGC 1 chr2:64701570-64701650 ( 64) TTTTCTGC 1 chr10:65458330-65458410 ( 3) TTTTCTTC 1 chr6:35361962-35362042 ( 64) TTTTCTTC 1 chr5:121358861-121358941 ( 58) TTTTCTTC 1 chr10:112477879-11247795 ( 52) CTTTTTGT 1 chr2:97322418-97322498 ( 67) CTTTTTTT 1 chr2:169896379-169896459 ( 33) CTTTTTTT 1 chr9:32899305-32899385 ( 3) CTTTTTGA 1 chr6:110836200-110836280 ( 47) CTTTTTTT 1 chr4:24770378-24770458 ( 62) CTTTTTGG 1 chr9:75646445-75646525 ( 13) CTTTTTGA 1 chr19:7952665-7952745 ( 72) CTTTTTTT 1 chr21:33394618-33394698 ( 40) CTTTTTGA 1 chr16:50315975-50316055 ( 30) CTTTTTGA 1 chr1:108586485-108586565 ( 16) CTTTTTGG 1 chr12:58268043-58268123 ( 39) CTTTTTGA 1 chr19:39155372-39155452 ( 61) CTTTTTTG 1 chr7:107935211-107935291 ( 44) CTTTTTTG 1 chr6:151501603-151501683 ( 61) CTTTTTTA 1 chr4:74047142-74047222 ( 29) CTTTTTCC 1 chr6:14982420-14982500 ( 57) TTTTCTGT 1 chr1:154130995-154131075 ( 13) TTTTCTTT 1 chr3:150353420-150353500 ( 45) TTTTCTTT 1 chr5:108194872-108194952 ( 29) TTTTCTTT 1 chr7:7908047-7908127 ( 73) TTTTCTTT 1 chr13:113238028-11323810 ( 65) TTTTCTGA 1 chr1:35384871-35384951 ( 69) TTTTCTTA 1 chr7:131304520-131304600 ( 46) TTTTCTCC 1 chr7:130760324-130760404 ( 73) TTTTCTCC 1 chr17:66494276-66494356 ( 18) TTTTCTTG 1 chr11:59831741-59831821 ( 67) CTTTTTCT 1 chr16:11913785-11913865 ( 59) CTTTTTCG 1 chr3:31503566-31503646 ( 9) CTTTCAGC 1 chr9:101962590-101962670 ( 39) CTTTTTCA 1 chr20:32064008-32064088 ( 23) CTTTCAGC 1 chr5:86377479-86377559 ( 51) CTTTTTCA 1 chr6:166756763-166756843 ( 64) TTTTCTCT 1 chr9:77703988-77704068 ( 30) TTTTCTCA 1 chr1:22251180-22251260 ( 73) CTTCCTGC 1 chr4:52772598-52772678 ( 50) CTTTCATT 1 chr2:216676481-216676561 ( 65) TTTTTTGT 1 chr7:8216998-8217078 ( 36) CTTTCAGG 1 chr12:49923363-49923443 ( 55) CTTTCAGA 1 chr7:139994423-139994503 ( 32) CTTTCATA 1 chr2:225503123-225503203 ( 27) CTTTCATA 1 chr4:86647202-86647282 ( 16) CTTCCTCC 1 chr12:124971872-12497195 ( 70) CTTCCTCC 1 chr17:73567441-73567521 ( 38) CTTCCTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.7531 E= 1.2e-012 -1302 175 -1302 -25 -1302 -1302 -1302 195 -1302 -1302 -1302 195 -1302 -227 -1302 188 -1302 159 -1302 22 -163 -1302 -1302 182 -1302 -36 81 58 -27 59 -36 -10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 83 E= 1.2e-012 0.000000 0.783133 0.000000 0.216867 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.048193 0.000000 0.951807 0.000000 0.698795 0.000000 0.301205 0.084337 0.000000 0.000000 0.915663 0.000000 0.180723 0.433735 0.385542 0.216867 0.349398 0.192771 0.240964 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTCTKN MEME-3 regular expression -------------------------------------------------------------------------------- [CT]TTT[CT]T[GT][CTA] -------------------------------------------------------------------------------- Time 11.27 secs. ******************************************************************************** ******************************************************************************** MOTIF WSAGAAAA MEME-4 width = 8 sites = 35 llr = 293 E-value = 1.0e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 51a18aaa pos.-specific C :3::2::: probability G :6:91::: matrix T 5::::::: bits 2.1 1.9 * *** 1.7 ** *** 1.5 ** *** Relative 1.3 ** *** Entropy 1.1 ****** (12.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGAGAAAA consensus TC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:25542757-25542837 54 3.87e-05 TAGTTCTTCT TGAGAAAA CGGCCAACAC chr20:1357469-1357549 37 3.87e-05 AGAGACGCTA TGAGAAAA GAGGAACAGA chr6:44537949-44538029 45 3.87e-05 TGGAGGTGGC TGAGAAAA CAGGAGCCTC chr7:100485354-100485434 11 3.87e-05 ACAAGCATGC AGAGAAAA TTGAGGAAGT chr5:131823805-131823885 10 3.87e-05 AGACAGGTC TGAGAAAA GGCTGACTTC chr6:20223521-20223601 48 3.87e-05 gtgtcctggg agagaaaa cagaaagaga chr4:24770378-24770458 45 3.87e-05 TAGATGTAGG TGAGAAAA GCACTTCCTC chr15:52053142-52053222 43 3.87e-05 AAGTAACGAG AGAGAAAA CAGGAAGTGC chr7:99474310-99474390 4 3.87e-05 CTA AGAGAAAA CATTCAGCAC chr2:158999205-158999285 27 3.87e-05 taccaggggc tgagaaaa agaggaagtg chr6:49605191-49605271 30 3.87e-05 AAAGAGATGA AGAGAAAA GGAGGAAGTG chr17:29818533-29818613 31 3.87e-05 aggttcaggc agagaaaa gaggaactgc chr20:13843045-13843125 35 7.50e-05 CTCGGCTTAC TCAGAAAA AGAGGAAGTG chrX:65266859-65266939 26 7.50e-05 TTTTAAGGTG ACAGAAAA AGAGGAAGTG chr9:90333939-90334019 24 7.50e-05 ATGGAGAGTC ACAGAAAA CAGGAAGTGC chr5:34732157-34732237 31 7.50e-05 GTTGGGGTGG TCAGAAAA AGCAGAAGTG chr12:91983000-91983080 50 7.50e-05 CTCAGAGGGT TCAGAAAA GCAAAGGAAG chr7:8216998-8217078 6 7.50e-05 TGTCA TCAGAAAA CAGCTAACTG chr2:102650049-102650129 52 7.50e-05 TCCTCATTCT TCAGAAAA GCAAAGCAAA chr1:223351259-223351339 55 7.50e-05 GAAGTGGCAG ACAGAAAA CGGTGCTCGA chr1:198101350-198101430 66 7.50e-05 agtaaacagg acagaaaa gtatctg chr1:112158654-112158734 41 7.50e-05 agtgccatga acagaaaa gaggaagtca chr16:68281401-68281481 24 1.09e-04 AAGGAGCATC TGAGCAAA GCAGATCTGG chr11:6668366-6668446 8 1.09e-04 GCCTCAG TGAGCAAA GGGGTGAGGA chr10:112262849-11226292 4 1.09e-04 ACA AGAGCAAA CCAGCCACAG chr10:30876540-30876620 17 1.09e-04 GGAACGGAAG AGAGCAAA TGAGGAAGTG chr7:24911557-24911637 50 1.42e-04 TTCCTCTTTT TCAGCAAA AATCCTTTCT chr18:22805288-22805368 7 1.42e-04 TGTTGG TCAGCAAA GTCTGCAGCT chr5:96240173-96240253 15 1.82e-04 CTCTAGTTAG AAAGAAAA GAGGAAGTGA chr17:57790363-57790443 29 1.82e-04 agatgagtgg taagaaaa agggaagtgt chr10:6110466-6110546 10 2.19e-04 TCTCCTCAA AGAGGAAA AGAAATGGGC chrX:39350868-39350948 25 2.19e-04 GGGACTTTTC AGAGGAAA CGTGATAAAG chr5:121358861-121358941 20 2.38e-04 tatatatcta ggagaaaa gaggaagtgg chr7:12624716-12624796 14 2.78e-04 CATGCTGCTT TGAAAAAA CAgtctccac chr21:33394618-33394698 67 2.78e-04 GAGGAAGTCG AGAAAAAA GGGGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:25542757-25542837 3.9e-05 53_[+4]_19 chr20:1357469-1357549 3.9e-05 36_[+4]_36 chr6:44537949-44538029 3.9e-05 44_[+4]_28 chr7:100485354-100485434 3.9e-05 10_[+4]_62 chr5:131823805-131823885 3.9e-05 9_[+4]_63 chr6:20223521-20223601 3.9e-05 47_[+4]_25 chr4:24770378-24770458 3.9e-05 44_[+4]_28 chr15:52053142-52053222 3.9e-05 42_[+4]_30 chr7:99474310-99474390 3.9e-05 3_[+4]_69 chr2:158999205-158999285 3.9e-05 26_[+4]_46 chr6:49605191-49605271 3.9e-05 29_[+4]_43 chr17:29818533-29818613 3.9e-05 30_[+4]_42 chr20:13843045-13843125 7.5e-05 34_[+4]_38 chrX:65266859-65266939 7.5e-05 25_[+4]_47 chr9:90333939-90334019 7.5e-05 23_[+4]_49 chr5:34732157-34732237 7.5e-05 30_[+4]_42 chr12:91983000-91983080 7.5e-05 49_[+4]_23 chr7:8216998-8217078 7.5e-05 5_[+4]_67 chr2:102650049-102650129 7.5e-05 51_[+4]_21 chr1:223351259-223351339 7.5e-05 54_[+4]_18 chr1:198101350-198101430 7.5e-05 65_[+4]_7 chr1:112158654-112158734 7.5e-05 40_[+4]_32 chr16:68281401-68281481 0.00011 23_[+4]_49 chr11:6668366-6668446 0.00011 7_[+4]_65 chr10:112262849-11226292 0.00011 3_[+4]_69 chr10:30876540-30876620 0.00011 16_[+4]_56 chr7:24911557-24911637 0.00014 49_[+4]_23 chr18:22805288-22805368 0.00014 6_[+4]_66 chr5:96240173-96240253 0.00018 14_[+4]_58 chr17:57790363-57790443 0.00018 28_[+4]_44 chr10:6110466-6110546 0.00022 9_[+4]_63 chrX:39350868-39350948 0.00022 24_[+4]_48 chr5:121358861-121358941 0.00024 19_[+4]_53 chr7:12624716-12624796 0.00028 13_[+4]_59 chr21:33394618-33394698 0.00028 66_[+4]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WSAGAAAA width=8 seqs=35 chr1:25542757-25542837 ( 54) TGAGAAAA 1 chr20:1357469-1357549 ( 37) TGAGAAAA 1 chr6:44537949-44538029 ( 45) TGAGAAAA 1 chr7:100485354-100485434 ( 11) AGAGAAAA 1 chr5:131823805-131823885 ( 10) TGAGAAAA 1 chr6:20223521-20223601 ( 48) AGAGAAAA 1 chr4:24770378-24770458 ( 45) TGAGAAAA 1 chr15:52053142-52053222 ( 43) AGAGAAAA 1 chr7:99474310-99474390 ( 4) AGAGAAAA 1 chr2:158999205-158999285 ( 27) TGAGAAAA 1 chr6:49605191-49605271 ( 30) AGAGAAAA 1 chr17:29818533-29818613 ( 31) AGAGAAAA 1 chr20:13843045-13843125 ( 35) TCAGAAAA 1 chrX:65266859-65266939 ( 26) ACAGAAAA 1 chr9:90333939-90334019 ( 24) ACAGAAAA 1 chr5:34732157-34732237 ( 31) TCAGAAAA 1 chr12:91983000-91983080 ( 50) TCAGAAAA 1 chr7:8216998-8217078 ( 6) TCAGAAAA 1 chr2:102650049-102650129 ( 52) TCAGAAAA 1 chr1:223351259-223351339 ( 55) ACAGAAAA 1 chr1:198101350-198101430 ( 66) ACAGAAAA 1 chr1:112158654-112158734 ( 41) ACAGAAAA 1 chr16:68281401-68281481 ( 24) TGAGCAAA 1 chr11:6668366-6668446 ( 8) TGAGCAAA 1 chr10:112262849-11226292 ( 4) AGAGCAAA 1 chr10:30876540-30876620 ( 17) AGAGCAAA 1 chr7:24911557-24911637 ( 50) TCAGCAAA 1 chr18:22805288-22805368 ( 7) TCAGCAAA 1 chr5:96240173-96240253 ( 15) AAAGAAAA 1 chr17:57790363-57790443 ( 29) TAAGAAAA 1 chr10:6110466-6110546 ( 10) AGAGGAAA 1 chrX:39350868-39350948 ( 25) AGAGGAAA 1 chr5:121358861-121358941 ( 20) GGAGAAAA 1 chr7:12624716-12624796 ( 14) TGAAAAAA 1 chr21:33394618-33394698 ( 67) AGAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.12623 E= 1.0e-002 90 -1177 -311 91 -219 56 128 -1177 194 -1177 -1177 -1177 -219 -1177 193 -1177 156 -44 -212 -1177 194 -1177 -1177 -1177 194 -1177 -1177 -1177 194 -1177 -1177 -1177 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 35 E= 1.0e-002 0.485714 0.000000 0.028571 0.485714 0.057143 0.342857 0.600000 0.000000 1.000000 0.000000 0.000000 0.000000 0.057143 0.000000 0.942857 0.000000 0.771429 0.171429 0.057143 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WSAGAAAA MEME-4 regular expression -------------------------------------------------------------------------------- [AT][GC]AGAAAA -------------------------------------------------------------------------------- Time 14.47 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTCCTCM MEME-5 width = 8 sites = 18 llr = 165 E-value = 4.4e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::2:3 pos.-specific C a7:aa2a7 probability G :::::::: matrix T :3a::6:: bits 2.1 * ** * 1.9 * *** * 1.7 * *** * 1.5 * *** * Relative 1.3 ***** * Entropy 1.1 ***** ** (13.3 bits) 0.8 ***** ** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCTCCTCC consensus T A A sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr21:43481637-43481717 4 1.05e-05 TAC CCTCCTCC CACCACCCAA chr12:113841861-11384194 33 1.05e-05 ACAACCCACT CCTCCTCC CTCTTTCCAC chr12:54569367-54569447 10 1.05e-05 gcacacaca cctcctcc ccagactctg chr2:102650049-102650129 11 1.05e-05 AGCACATTCT CCTCCTCC TTGGCATGCC chr5:131803502-131803582 63 1.05e-05 TCTTTCTTGA CCTCCTCC CACCCCCCAC chr1:108586485-108586565 62 1.05e-05 atggtaatgg cctcctcc tctggtctct chr8:105476594-105476674 17 1.98e-05 AGGGAATGCC CCTCCCCC ACAGCATTCC chr1:35384871-35384951 7 4.21e-05 CACTCC CCTCCACC AGAGGTCCCT chr1:246734821-246734901 3 4.21e-05 AC CCTCCACC CTTCCGTCTC chr2:225503123-225503203 68 4.21e-05 ATTTTGGCTG CCTCCTCA TTCTG chr4:74047142-74047222 5 5.38e-05 AGAA CTTCCTCC TTTAATTCCA chr7:156573546-156573626 4 6.44e-05 cca cctccCCA GTGACAGAAA chr1:206329078-206329158 19 6.44e-05 GCCACAGGGC CCTCCCCA CATGCCTGCC chr1:52016873-52016953 7 8.67e-05 CATTTG CCTCCACA ATCCCAGTTA chr10:15231651-15231731 3 8.67e-05 CA CTTCCCCC TCATTCAAAT chr2:231576183-231576263 50 1.12e-04 ggccGCACTT CTTCCTCA TCTCTTCCCC chr2:62372873-62372953 72 1.12e-04 ggtgtgaatt cttccacc a chr21:15680723-15680803 20 1.12e-04 TGAGGAGCTT CTTCCTCA AAGTATTGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:43481637-43481717 1e-05 3_[+5]_69 chr12:113841861-11384194 1e-05 32_[+5]_40 chr12:54569367-54569447 1e-05 9_[+5]_63 chr2:102650049-102650129 1e-05 10_[+5]_62 chr5:131803502-131803582 1e-05 62_[+5]_10 chr1:108586485-108586565 1e-05 61_[+5]_11 chr8:105476594-105476674 2e-05 16_[+5]_56 chr1:35384871-35384951 4.2e-05 6_[+5]_66 chr1:246734821-246734901 4.2e-05 2_[+5]_70 chr2:225503123-225503203 4.2e-05 67_[+5]_5 chr4:74047142-74047222 5.4e-05 4_[+5]_68 chr7:156573546-156573626 6.4e-05 3_[+5]_69 chr1:206329078-206329158 6.4e-05 18_[+5]_54 chr1:52016873-52016953 8.7e-05 6_[+5]_66 chr10:15231651-15231731 8.7e-05 2_[+5]_70 chr2:231576183-231576263 0.00011 49_[+5]_23 chr2:62372873-62372953 0.00011 71_[+5]_1 chr21:15680723-15680803 0.00011 19_[+5]_53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTCCTCM width=8 seqs=18 chr21:43481637-43481717 ( 4) CCTCCTCC 1 chr12:113841861-11384194 ( 33) CCTCCTCC 1 chr12:54569367-54569447 ( 10) CCTCCTCC 1 chr2:102650049-102650129 ( 11) CCTCCTCC 1 chr5:131803502-131803582 ( 63) CCTCCTCC 1 chr1:108586485-108586565 ( 62) CCTCCTCC 1 chr8:105476594-105476674 ( 17) CCTCCCCC 1 chr1:35384871-35384951 ( 7) CCTCCACC 1 chr1:246734821-246734901 ( 3) CCTCCACC 1 chr2:225503123-225503203 ( 68) CCTCCTCA 1 chr4:74047142-74047222 ( 5) CTTCCTCC 1 chr7:156573546-156573626 ( 4) CCTCCCCA 1 chr1:206329078-206329158 ( 19) CCTCCCCA 1 chr1:52016873-52016953 ( 7) CCTCCACA 1 chr10:15231651-15231731 ( 3) CTTCCCCC 1 chr2:231576183-231576263 ( 50) CTTCCTCA 1 chr2:62372873-62372953 ( 72) CTTCCACC 1 chr21:15680723-15680803 ( 20) CTTCCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.8329 E= 4.4e+002 -1081 210 -1081 -1081 -1081 164 -1081 10 -1081 -1081 -1081 195 -1081 210 -1081 -1081 -1081 210 -1081 -1081 -23 -6 -1081 110 -1081 210 -1081 -1081 35 152 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 18 E= 4.4e+002 0.000000 1.000000 0.000000 0.000000 0.000000 0.722222 0.000000 0.277778 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.222222 0.222222 0.000000 0.555556 0.000000 1.000000 0.000000 0.000000 0.333333 0.666667 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCTCM MEME-5 regular expression -------------------------------------------------------------------------------- C[CT]TCC[TAC]C[CA] -------------------------------------------------------------------------------- Time 17.60 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:58268043-58268123 1.13e-03 30_[+2(1.31e-05)]_42 chr9:77703988-77704068 9.30e-04 20_[+2(1.31e-05)]_52 chr1:230286182-230286262 8.67e-05 31_[+2(1.31e-05)]_[+3(1.39e-05)]_33 chr17:66494276-66494356 2.27e-03 35_[+2(1.31e-05)]_37 chr4:155406407-155406487 4.36e-02 50_[+1(1.74e-05)]_22 chr1:108586485-108586565 1.68e-06 33_[+1(1.74e-05)]_20_[+5(1.05e-05)]_\ 11 chr6:154623406-154623486 3.04e-05 45_[+2(1.31e-05)]_27 chr1:206329078-206329158 5.97e-03 18_[+5(6.44e-05)]_9_[+2(2.49e-05)]_\ 37 chr17:73567441-73567521 9.54e-05 24_[+1(1.74e-05)]_5_[+5(5.38e-05)]_\ 35 chr6:44232099-44232179 9.88e-06 42_[+2(2.49e-05)]_14_[+1(1.74e-05)]_\ 8 chr12:166012-166092 3.55e-02 80 chr2:179041944-179042024 2.24e-02 26_[+1(1.74e-05)]_46 chr8:106407729-106407809 1.15e-04 34_[+2(1.31e-05)]_38 chr16:50315975-50316055 3.31e-03 21_[+2(2.49e-05)]_51 chr10:112477879-11247795 7.45e-04 20_[+2(9.12e-05)]_15_[+2(2.49e-05)]_\ 29 chr10:70809497-70809577 1.79e-05 37_[+2(1.31e-05)]_[+3(9.09e-05)]_27 chr14:103040009-10304008 1.07e-03 48_[+1(1.74e-05)]_24 chr19:56833401-56833481 1.25e-04 31_[+2(1.31e-05)]_[+3(2.85e-05)]_33 chr21:33394618-33394698 3.74e-07 31_[+2(1.31e-05)]_17_[+1(1.74e-05)]_\ 16 chr5:176748069-176748149 6.06e-03 38_[+2(2.49e-05)]_34 chr6:130427627-130427707 7.85e-05 38_[+3(1.39e-05)]_[+2(2.49e-05)]_26 chr4:2772637-2772717 3.16e-02 33_[+1(1.74e-05)]_39 chr5:131803502-131803582 4.11e-05 45_[+2(1.31e-05)]_9_[+5(1.05e-05)]_\ 10 chr16:2737359-2737439 4.05e-05 46_[+2(5.30e-05)]_[+3(9.09e-05)]_18 chr10:30876540-30876620 1.99e-04 25_[+1(1.74e-05)]_47 chr2:43333239-43333319 1.74e-02 37_[+2(2.49e-05)]_35 chr8:110378625-110378705 3.93e-02 51_[+1(1.74e-05)]_21 chr19:7952665-7952745 7.13e-04 57_[+2(1.31e-05)]_15 chr12:104500870-10450095 1.24e-04 32_[+2(1.31e-05)]_27_[+3(4.40e-05)]_\ 5 chr18:45497277-45497357 1.49e-03 18_[+1(1.74e-05)]_54 chr2:106356741-106356821 1.63e-02 46_[+1(1.74e-05)]_26 chr6:36660167-36660247 9.70e-04 25_[+1(3.40e-05)]_47 chrX:151304941-151305021 1.56e-05 10_[+2(1.31e-05)]_34_[+1(1.74e-05)]_\ 20 chr13:113238028-11323810 7.68e-02 80 chr10:112262849-11226292 5.16e-03 46_[+1(3.40e-05)]_26 chr2:146529261-146529341 4.02e-03 28_[+2(1.31e-05)]_44 chr10:73006807-73006887 4.55e-02 27_[+1(1.74e-05)]_45 chr5:81126581-81126661 1.15e-02 48_[+1(1.74e-05)]_24 chr2:196444970-196445050 2.57e-03 12_[+2(1.31e-05)]_60 chr1:112158654-112158734 5.12e-03 40_[+4(7.50e-05)]_[+1(1.74e-05)]_24 chr5:169785339-169785419 7.37e-03 80 chr10:27825519-27825599 4.68e-02 22_[+1(1.74e-05)]_50 chr7:158488964-158489044 3.33e-07 25_[+1(1.74e-05)]_13_[+3(9.09e-05)]_\ 4_[+2(1.31e-05)]_14 chr9:137297456-137297536 1.92e-04 45_[+1(1.74e-05)]_27 chr7:130689292-130689372 1.08e-03 42_[+2(1.31e-05)]_30 chr5:72233698-72233778 2.71e-03 33_[+1(1.74e-05)]_39 chr17:29818533-29818613 6.54e-03 30_[+4(3.87e-05)]_[+1(5.03e-05)]_34 chr7:156573546-156573626 3.23e-04 3_[+5(6.44e-05)]_41_[+1(1.74e-05)]_\ 20 chr22:42958558-42958638 9.39e-04 39_[+2(1.31e-05)]_33 chr11:74033011-74033091 3.49e-05 34_[+1(1.74e-05)]_20_[+3(9.09e-05)]_\ 10 chr3:115757496-115757576 3.27e-03 29_[+2(1.31e-05)]_43 chr16:30177672-30177752 1.37e-02 80 chr2:127395131-127395211 3.73e-02 44_[+1(1.74e-05)]_28 chr7:26369605-26369685 7.36e-02 35_[+1(1.74e-05)]_37 chr8:105342124-105342204 1.74e-02 51_[+1(5.03e-05)]_21 chr6:49605191-49605271 4.42e-03 29_[+4(3.87e-05)]_1_[+1(1.74e-05)]_\ 34 chr1:207110945-207111025 7.67e-03 48_[+2(3.89e-05)]_24 chr8:145052786-145052866 7.37e-02 35_[+1(1.74e-05)]_37 chr15:72487608-72487688 5.86e-02 80 chr18:22805288-22805368 3.12e-06 25_[+2(1.31e-05)]_[+3(1.39e-05)]_39 chr21:15680723-15680803 9.43e-05 58_[+2(1.31e-05)]_14 chr3:72572673-72572753 4.28e-04 20_[+3(9.09e-05)]_20_[+2(1.31e-05)]_\ 24 chr20:61609446-61609526 1.31e-04 24_[+2(1.31e-05)]_[+3(9.09e-05)]_40 chr2:225503123-225503203 7.90e-05 48_[+2(1.31e-05)]_11_[+5(4.21e-05)]_\ 5 chr4:74047142-74047222 4.08e-04 4_[+5(5.38e-05)]_8_[+2(5.30e-05)]_\ 52 chr9:75646445-75646525 3.03e-03 23_[+1(1.74e-05)]_49 chr16:30564872-30564952 1.70e-02 80 chr4:26938946-26939026 3.42e-03 21_[+2(2.49e-05)]_51 chr1:93994093-93994173 8.85e-02 36_[+1(1.74e-05)]_36 chr2:112761939-112762019 2.53e-05 28_[+2(1.31e-05)]_44 chr10:15527176-15527256 4.78e-03 43_[+1(1.74e-05)]_29 chr5:149438489-149438569 4.77e-03 25_[+2(1.31e-05)]_47 chr2:158999205-158999285 1.85e-03 26_[+4(3.87e-05)]_1_[+1(1.74e-05)]_\ 37 chr1:204468260-204468340 5.76e-03 33_[+1(1.74e-05)]_39 chr19:49619945-49620025 4.69e-02 17_[+1(1.74e-05)]_55 chr18:46242139-46242219 4.15e-02 38_[+1(1.74e-05)]_34 chrX:117748268-117748348 5.39e-02 51_[+1(1.74e-05)]_21 chr10:98524210-98524290 8.16e-02 27_[+1(1.74e-05)]_45 chr8:41427629-41427709 1.04e-01 35_[+1(3.40e-05)]_37 chr7:139994423-139994503 5.31e-04 23_[+2(1.31e-05)]_49 chr7:7908047-7908127 2.18e-04 51_[+1(1.74e-05)]_21 chr10:15231651-15231731 8.51e-05 [+2(2.49e-05)]_41_[+2(1.31e-05)]_23 chr14:91591677-91591757 1.14e-02 37_[+1(3.40e-05)]_35 chr11:10846578-10846658 6.40e-02 26_[+1(6.66e-05)]_46 chr5:148929543-148929623 8.40e-03 38_[+2(2.49e-05)]_34 chr9:124822915-124822995 1.81e-04 46_[+2(1.31e-05)]_[+3(9.09e-05)]_18 chr11:12688611-12688691 7.19e-04 37_[+2(5.30e-05)]_16_[+1(1.74e-05)]_\ 11 chr11:59831741-59831821 1.61e-04 58_[+2(1.31e-05)]_14 chr1:43409999-43410079 2.54e-03 20_[+1(1.74e-05)]_52 chr7:99474310-99474390 7.50e-04 3_[+4(3.87e-05)]_26_[+1(1.74e-05)]_\ 35 chr6:91169281-91169361 9.61e-02 80 chrX:39350868-39350948 6.54e-04 54_[+2(7.86e-05)]_18 chr15:52053142-52053222 1.82e-03 42_[+4(3.87e-05)]_[+1(6.66e-05)]_22 chr1:42372803-42372883 6.11e-03 13_[+1(1.74e-05)]_59 chr1:198101350-198101430 5.28e-03 32_[+1(1.74e-05)]_25_[+4(7.50e-05)]_\ 7 chr12:49923363-49923443 7.36e-04 46_[+2(1.31e-05)]_26 chr1:223351259-223351339 2.97e-03 41_[+1(1.74e-05)]_5_[+4(7.50e-05)]_\ 18 chr17:57790363-57790443 2.80e-02 80 chr1:234977646-234977726 5.07e-03 45_[+1(5.03e-05)]_27 chr2:29223461-29223541 5.17e-02 32_[+1(3.40e-05)]_40 chr1:157481989-157482069 2.73e-02 51_[+1(1.74e-05)]_21 chr12:53649933-53650013 1.10e-04 34_[+2(1.31e-05)]_[+3(1.39e-05)]_30 chr17:45277529-45277609 1.01e-01 30_[+1(1.74e-05)]_19_[+1(1.74e-05)]_\ 15 chr5:121358861-121358941 2.82e-04 27_[+1(1.74e-05)]_45 chr5:96240173-96240253 3.02e-03 22_[+1(1.74e-05)]_50 chr6:15683824-15683904 7.15e-02 17_[+1(1.74e-05)]_55 chr7:12476949-12477029 4.92e-02 80 chr8:105476594-105476674 2.39e-05 16_[+5(1.98e-05)]_9_[+2(1.31e-05)]_\ 39 chr11:73695443-73695523 1.66e-01 80 chr6:35361962-35362042 5.91e-04 54_[+2(1.31e-05)]_18 chr6:151501603-151501683 1.06e-03 52_[+2(1.31e-05)]_20 chr5:171061251-171061331 1.75e-05 27_[+2(1.31e-05)]_25_[+1(8.49e-05)]_\ 12 chr5:108194872-108194952 1.75e-03 19_[+2(1.31e-05)]_53 chr4:24770378-24770458 1.49e-05 44_[+4(3.87e-05)]_1_[+2(1.31e-05)]_\ 19 chr1:113256722-113256802 1.23e-01 32_[+1(5.03e-05)]_40 chr7:107279155-107279235 2.14e-03 51_[+1(1.74e-05)]_21 chrX:153947063-153947143 8.05e-05 16_[+1(5.03e-05)]_6_[+2(2.49e-05)]_\ 16_[+1(1.74e-05)]_18 chr2:102650049-102650129 3.94e-06 10_[+5(1.05e-05)]_19_[+2(1.31e-05)]_\ 6_[+4(7.50e-05)]_21 chr3:107821447-107821527 4.82e-02 80 chr1:52016873-52016953 1.41e-03 6_[+5(8.67e-05)]_34_[+2(3.89e-05)]_\ 24 chr7:24911557-24911637 1.89e-05 36_[+2(1.31e-05)]_17_[+3(9.09e-05)]_\ 11 chr8:19756017-19756097 5.13e-03 29_[+1(1.74e-05)]_43 chr2:64701570-64701650 2.33e-03 54_[+2(3.89e-05)]_18 chr11:6668366-6668446 6.84e-03 48_[+1(1.74e-05)]_24 chr3:150353420-150353500 2.80e-03 35_[+2(1.31e-05)]_37 chr7:112196912-112196992 6.10e-04 46_[+2(1.31e-05)]_26 chr18:46402288-46402368 3.51e-03 29_[+2(1.31e-05)]_43 chr3:99979070-99979150 1.11e-01 34_[+1(3.40e-05)]_38 chr21:36318735-36318815 3.24e-03 55_[+2(3.89e-05)]_17 chr22:37256928-37257008 3.08e-06 26_[+2(1.31e-05)]_30_[+1(1.74e-05)]_\ 8 chr20:57582917-57582997 1.37e-01 80 chr14:20961963-20962043 3.68e-06 3_[+2(7.86e-05)]_41_[+1(1.74e-05)]_\ 20 chr2:62372873-62372953 4.13e-04 21_[+1(1.74e-05)]_51 chr2:28762005-28762085 9.89e-02 46_[+1(3.40e-05)]_26 chr7:99966942-99967022 1.87e-01 46_[+1(3.40e-05)]_26 chrX:48559458-48559538 1.63e-03 35_[+2(1.31e-05)]_37 chr11:67886712-67886792 5.44e-02 33_[+1(1.74e-05)]_39 chr18:8601395-8601475 2.63e-02 41_[+1(1.74e-05)]_31 chr6:20223521-20223601 1.99e-07 1_[+2(7.86e-05)]_22_[+1(1.74e-05)]_\ 8_[+4(3.87e-05)]_25 chr11:114133570-11413365 8.32e-03 49_[+1(1.74e-05)]_23 chr16:30151267-30151347 2.07e-02 24_[+2(1.31e-05)]_48 chr20:39126828-39126908 7.92e-02 80 chr15:39646544-39646624 6.95e-04 43_[+1(1.74e-05)]_29 chr1:246734821-246734901 3.08e-05 2_[+5(4.21e-05)]_14_[+2(3.89e-05)]_\ 48 chr5:86377479-86377559 2.10e-04 42_[+2(2.49e-05)]_30 chr3:5079752-5079832 1.94e-04 55_[+2(1.31e-05)]_17 chr16:11302868-11302948 9.52e-04 12_[+1(1.74e-05)]_60 chr2:61023866-61023946 4.97e-02 54_[+2(5.30e-05)]_18 chr7:130760324-130760404 7.35e-03 20_[+1(1.74e-05)]_52 chr12:54569367-54569447 2.40e-04 9_[+5(1.05e-05)]_19_[+2(1.31e-05)]_\ 36 chr3:40449253-40449333 2.81e-02 44_[+1(1.74e-05)]_28 chr5:1191145-1191225 2.12e-02 30_[+1(1.74e-05)]_42 chr12:105143974-10514405 1.20e-02 19_[+1(1.74e-05)]_53 chr4:109935902-109935982 7.02e-03 40_[+1(1.74e-05)]_32 chr20:32064008-32064088 2.90e-04 36_[+2(1.31e-05)]_36 chr10:62735643-62735723 1.46e-02 46_[+1(1.74e-05)]_26 chr11:88092881-88092961 2.32e-02 47_[+1(1.74e-05)]_25 chr19:18512802-18512882 1.18e-02 38_[+1(1.74e-05)]_34 chr7:8216998-8217078 7.72e-06 5_[+4(7.50e-05)]_14_[+2(1.31e-05)]_\ 45 chr1:161197521-161197601 1.82e-04 13_[+2(5.30e-05)]_17_[+2(1.31e-05)]_\ 34 chr9:101962590-101962670 2.23e-03 30_[+2(3.89e-05)]_42 chr7:66919162-66919242 1.23e-02 26_[+1(1.74e-05)]_46 chr9:95805554-95805634 3.04e-01 80 chr3:31503566-31503646 2.55e-03 20_[+2(2.49e-05)]_52 chr12:91983000-91983080 1.54e-06 24_[+2(1.31e-05)]_17_[+4(7.50e-05)]_\ 3_[+1(8.49e-05)]_12 chr16:11913785-11913865 2.04e-02 80 chr21:34439950-34440030 4.87e-05 25_[+2(1.31e-05)]_[+3(1.39e-05)]_39 chr22:31886570-31886650 2.22e-02 16_[+1(3.40e-05)]_56 chr12:113841861-11384194 2.93e-05 4_[+5(5.38e-05)]_20_[+5(1.05e-05)]_\ 7_[+2(2.49e-05)]_[+3(4.40e-05)]_17 chr16:71126036-71126116 1.54e-03 50_[+2(1.31e-05)]_22 chr4:139697134-139697214 5.44e-03 22_[+2(5.30e-05)]_50 chr6:166756763-166756843 2.18e-03 50_[+1(3.40e-05)]_22 chr21:38737174-38737254 7.68e-05 35_[+2(1.31e-05)]_[+3(2.85e-05)]_29 chr8:48435026-48435106 7.67e-02 50_[+1(1.74e-05)]_22 chr1:154130995-154131075 2.08e-03 20_[+2(2.49e-05)]_52 chr16:68281401-68281481 1.68e-04 42_[+2(3.89e-05)]_30 chr6:110836200-110836280 1.55e-03 38_[+2(1.31e-05)]_34 chr6:14982420-14982500 1.98e-02 47_[+2(2.49e-05)]_25 chr7:104897836-104897916 2.24e-02 26_[+1(1.74e-05)]_46 chr5:169766106-169766186 1.23e-05 34_[+1(1.74e-05)]_38 chr9:32899305-32899385 1.48e-03 23_[+1(3.40e-05)]_49 chr2:197114697-197114777 4.64e-02 21_[+1(1.74e-05)]_51 chr14:100481815-10048189 6.61e-02 47_[+1(1.74e-05)]_25 chr10:75950073-75950153 1.21e-02 20_[+2(3.89e-05)]_52 chr19:47366389-47366469 1.94e-03 36_[+2(2.49e-05)]_13_[+3(9.09e-05)]_\ 15 chr3:44087435-44087515 9.48e-03 80 chr18:1308815-1308895 1.68e-03 59_[+2(1.31e-05)]_13 chr12:124971872-12497195 2.76e-04 19_[+1(5.03e-05)]_42_[+5(5.38e-05)]_\ 3 chr3:193559875-193559955 2.00e-04 38_[+2(1.31e-05)]_34 chr5:131823805-131823885 8.74e-05 9_[+4(3.87e-05)]_4_[+2(9.12e-05)]_\ 51 chr5:34732157-34732237 1.32e-01 30_[+4(7.50e-05)]_42 chr7:77327753-77327833 3.51e-02 51_[+1(1.74e-05)]_21 chr2:218113534-218113614 7.80e-03 56_[+2(5.30e-05)]_16 chr17:72474970-72475050 2.62e-04 48_[+2(1.31e-05)]_24 chr1:22251180-22251260 2.51e-03 20_[+2(3.89e-05)]_52 chr1:33985242-33985322 7.37e-03 47_[+1(1.74e-05)]_25 chr10:33294259-33294339 1.24e-02 41_[+2(2.49e-05)]_31 chr3:32619394-32619474 9.78e-06 44_[+2(1.31e-05)]_[+3(9.09e-05)]_20 chr12:32914793-32914873 1.44e-04 13_[+2(1.31e-05)]_[+3(2.85e-05)]_7_\ [+3(9.09e-05)]_36 chr7:75261192-75261272 5.46e-02 48_[+1(3.40e-05)]_24 chr9:90333939-90334019 4.25e-03 23_[+4(7.50e-05)]_[+1(6.66e-05)]_6_\ [+1(1.74e-05)]_27 chr1:186035740-186035820 5.33e-03 29_[+2(2.49e-05)]_43 chr4:127937029-127937109 5.55e-02 29_[+1(3.40e-05)]_43 chr2:65455534-65455614 1.77e-02 80 chr7:12624716-12624796 6.44e-05 28_[+2(1.31e-05)]_44 chr21:43481637-43481717 1.40e-04 3_[+5(1.05e-05)]_14_[+2(1.31e-05)]_\ 47 chr6:39074978-39075058 1.99e-04 33_[+2(1.31e-05)]_[+3(2.85e-05)]_31 chr20:35471915-35471995 1.52e-02 32_[+1(1.74e-05)]_40 chr10:114745823-11474590 2.11e-04 40_[+2(1.31e-05)]_32 chr7:142652089-142652169 1.24e-04 53_[+2(1.31e-05)]_[+3(4.40e-05)]_11 chr12:90321061-90321141 1.05e-03 23_[+2(1.31e-05)]_49 chr2:169896379-169896459 1.77e-03 24_[+2(1.31e-05)]_48 chr7:151330201-151330281 2.90e-02 39_[+1(1.74e-05)]_33 chr2:71299269-71299349 1.74e-01 52_[+2(5.30e-05)]_20 chr4:127568690-127568770 1.23e-01 19_[+1(3.40e-05)]_53 chrX:65266859-65266939 6.25e-03 25_[+4(7.50e-05)]_1_[+1(1.74e-05)]_\ 38 chr2:216676481-216676561 1.52e-03 52_[+1(1.74e-05)]_20 chr2:64488085-64488165 1.35e-01 80 chr7:131304520-131304600 3.87e-05 36_[+2(1.31e-05)]_36 chr7:107935211-107935291 4.00e-03 35_[+2(2.49e-05)]_37 chr3:53017617-53017697 6.92e-02 37_[+1(1.74e-05)]_35 chr10:72443176-72443256 2.60e-02 29_[+1(1.74e-05)]_43 chr2:231576183-231576263 2.59e-05 13_[+1(6.66e-05)]_59 chr10:6110466-6110546 2.38e-03 35_[+1(3.40e-05)]_37 chr3:186743051-186743131 5.87e-04 41_[+2(5.30e-05)]_[+3(9.09e-05)]_23 chr20:32953743-32953823 6.23e-02 31_[+1(1.74e-05)]_41 chr12:124875975-12487605 7.14e-05 40_[+2(1.31e-05)]_32 chr1:35384871-35384951 3.11e-04 6_[+5(4.21e-05)]_44_[+2(1.31e-05)]_\ 14 chr7:100485354-100485434 4.99e-07 10_[+4(3.87e-05)]_2_[+1(1.74e-05)]_\ 4_[+1(8.49e-05)]_40 chr6:7431655-7431735 9.72e-04 29_[+1(1.74e-05)]_43 chr6:161591325-161591405 3.77e-03 51_[+2(1.31e-05)]_21 chr4:86647202-86647282 3.73e-04 15_[+5(5.38e-05)]_6_[+2(1.31e-05)]_\ 43 chr2:113013554-113013634 1.60e-02 42_[+1(1.74e-05)]_30 chr17:39662485-39662565 1.16e-02 27_[+1(1.74e-05)]_45 chr11:75287694-75287774 1.58e-02 49_[+1(1.74e-05)]_23 chr5:169696045-169696125 1.28e-04 36_[+2(1.31e-05)]_36 chr5:141044733-141044813 1.37e-02 51_[+1(1.74e-05)]_21 chr22:31391071-31391151 1.44e-03 46_[+1(1.74e-05)]_26 chr16:85605449-85605529 9.99e-02 27_[+1(3.40e-05)]_45 chr20:13843045-13843125 1.01e-04 34_[+4(7.50e-05)]_1_[+1(1.74e-05)]_\ 29 chr2:97322418-97322498 1.77e-03 58_[+2(1.31e-05)]_14 chr4:52772598-52772678 3.10e-03 23_[+2(1.31e-05)]_49 chr19:39155372-39155452 3.07e-03 80 chr12:53350863-53350943 8.63e-02 15_[+1(6.66e-05)]_57 chr6:44537949-44538029 5.50e-03 24_[+1(5.03e-05)]_12_[+4(3.87e-05)]_\ 28 chr20:1357469-1357549 9.35e-03 36_[+4(3.87e-05)]_36 chr1:25542757-25542837 4.71e-04 29_[+1(1.74e-05)]_16_[+4(3.87e-05)]_\ 19 chr15:62414524-62414604 6.24e-02 35_[+1(1.74e-05)]_37 chr10:126258549-12625862 6.92e-04 35_[+2(1.31e-05)]_37 chr10:65458330-65458410 3.84e-03 35_[+1(3.40e-05)]_37 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n04.farnam.hpc.yale.internal ********************************************************************************