******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/SMAD1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr12:56544505-56544585 1.0000 80 chr11:123105928-12310600 1.0000 80 chr11:59609972-59610052 1.0000 80 chr14:24895068-24895148 1.0000 80 chr1:27442893-27442973 1.0000 80 chr12:66018481-66018561 1.0000 80 chr5:81032043-81032123 1.0000 80 chr17:44820332-44820412 1.0000 80 chr21:35916382-35916462 1.0000 80 chr6:118981537-118981617 1.0000 80 chr2:169290794-169290874 1.0000 80 chr12:104781158-10478123 1.0000 80 chr1:206629268-206629348 1.0000 80 chr11:72125370-72125450 1.0000 80 chr5:108804595-108804675 1.0000 80 chr17:61753471-61753551 1.0000 80 chr19:49043019-49043099 1.0000 80 chr1:11717870-11717950 1.0000 80 chr15:63729148-63729228 1.0000 80 chr7:104524719-104524799 1.0000 80 chr8:61664348-61664428 1.0000 80 chr2:69690092-69690172 1.0000 80 chr8:130694423-130694503 1.0000 80 chr9:90431121-90431201 1.0000 80 chr1:160070969-160071049 1.0000 80 chr1:183998460-183998540 1.0000 80 chr1:9621600-9621680 1.0000 80 chr9:130769938-130770018 1.0000 80 chr10:22013821-22013901 1.0000 80 chr12:121842705-12184278 1.0000 80 chr8:29999281-29999361 1.0000 80 chr1:114491900-114491980 1.0000 80 chr15:59048321-59048401 1.0000 80 chr19:10382346-10382426 1.0000 80 chr10:89346132-89346212 1.0000 80 chr6:86310604-86310684 1.0000 80 chr17:43235952-43236032 1.0000 80 chr11:114030875-11403095 1.0000 80 chr5:159546894-159546974 1.0000 80 chr10:49592797-49592877 1.0000 80 chr7:75932796-75932876 1.0000 80 chr1:159851803-159851883 1.0000 80 chr6:80842846-80842926 1.0000 80 chr14:74239040-74239120 1.0000 80 chr7:2064084-2064164 1.0000 80 chr1:224392636-224392716 1.0000 80 chr4:74606347-74606427 1.0000 80 chr18:9575664-9575744 1.0000 80 chr13:67798485-67798565 1.0000 80 chr1:182299493-182299573 1.0000 80 chr19:40715176-40715256 1.0000 80 chr9:37349067-37349147 1.0000 80 chr15:64854353-64854433 1.0000 80 chr1:46341829-46341909 1.0000 80 chr6:16006203-16006283 1.0000 80 chr2:179349546-179349626 1.0000 80 chr8:145129330-145129410 1.0000 80 chr9:101267344-101267424 1.0000 80 chr11:65191876-65191956 1.0000 80 chr11:57019378-57019458 1.0000 80 chr1:181096382-181096462 1.0000 80 chr2:26214617-26214697 1.0000 80 chr17:30810624-30810704 1.0000 80 chr16:22291467-22291547 1.0000 80 chr3:40761566-40761646 1.0000 80 chr7:127443767-127443847 1.0000 80 chr10:74124163-74124243 1.0000 80 chr6:2770624-2770704 1.0000 80 chr14:39614699-39614779 1.0000 80 chr2:241543918-241543998 1.0000 80 chr11:110350665-11035074 1.0000 80 chr2:68815866-68815946 1.0000 80 chr1:113601756-113601836 1.0000 80 chr12:57030711-57030791 1.0000 80 chr19:7764401-7764481 1.0000 80 chr3:99587315-99587395 1.0000 80 chr22:41763247-41763327 1.0000 80 chr17:58719289-58719369 1.0000 80 chr1:234659480-234659560 1.0000 80 chr20:362440-362520 1.0000 80 chr18:3603751-3603831 1.0000 80 chr1:203595841-203595921 1.0000 80 chr12:71988169-71988249 1.0000 80 chr11:16864996-16865076 1.0000 80 chr1:7844153-7844233 1.0000 80 chr19:58111170-58111250 1.0000 80 chr11:65194224-65194304 1.0000 80 chr6:30843430-30843510 1.0000 80 chr9:96215549-96215629 1.0000 80 chr15:68087312-68087392 1.0000 80 chr17:56408895-56408975 1.0000 80 chr5:10601544-10601624 1.0000 80 chr15:93426047-93426127 1.0000 80 chr5:37413279-37413359 1.0000 80 chr5:158769001-158769081 1.0000 80 chr1:61719210-61719290 1.0000 80 chr11:59314569-59314649 1.0000 80 chr18:43336116-43336196 1.0000 80 chr18:68132106-68132186 1.0000 80 chr10:103305792-10330587 1.0000 80 chr5:137805110-137805190 1.0000 80 chr11:86304092-86304172 1.0000 80 chr2:119560704-119560784 1.0000 80 chr5:145491182-145491262 1.0000 80 chr5:76464869-76464949 1.0000 80 chr2:58821453-58821533 1.0000 80 chr1:224399468-224399548 1.0000 80 chr14:102176487-10217656 1.0000 80 chrX:2171188-2171268 1.0000 80 chr3:169684495-169684575 1.0000 80 chr17:74410802-74410882 1.0000 80 chr12:122884545-12288462 1.0000 80 chr5:131628968-131629048 1.0000 80 chr12:1715285-1715365 1.0000 80 chr6:44072995-44073075 1.0000 80 chr10:18896617-18896697 1.0000 80 chr6:41246840-41246920 1.0000 80 chr19:46389407-46389487 1.0000 80 chr12:9913353-9913433 1.0000 80 chr2:72998170-72998250 1.0000 80 chr11:77941650-77941730 1.0000 80 chr6:37208115-37208195 1.0000 80 chr17:56468993-56469073 1.0000 80 chr1:156093625-156093705 1.0000 80 chr5:153603039-153603119 1.0000 80 chr6:27099774-27099854 1.0000 80 chr1:14769765-14769845 1.0000 80 chr5:176831285-176831365 1.0000 80 chr2:219187489-219187569 1.0000 80 chr2:62515198-62515278 1.0000 80 chr22:50978204-50978284 1.0000 80 chr11:62648363-62648443 1.0000 80 chr16:23913956-23914036 1.0000 80 chr10:24672654-24672734 1.0000 80 chr1:201885867-201885947 1.0000 80 chr6:147021344-147021424 1.0000 80 chr18:28777857-28777937 1.0000 80 chr1:151763157-151763237 1.0000 80 chr9:101836665-101836745 1.0000 80 chr1:166664501-166664581 1.0000 80 chr16:15886611-15886691 1.0000 80 chr10:119171093-11917117 1.0000 80 chr1:113168503-113168583 1.0000 80 chr6:157738322-157738402 1.0000 80 chr17:41393285-41393365 1.0000 80 chr7:12768909-12768989 1.0000 80 chr8:101734258-101734338 1.0000 80 chr12:120667130-12066721 1.0000 80 chr10:72108405-72108485 1.0000 80 chr11:65269509-65269589 1.0000 80 chr1:156586391-156586471 1.0000 80 chr2:3629152-3629232 1.0000 80 chr4:142834154-142834234 1.0000 80 chr4:10118747-10118827 1.0000 80 chr6:89791377-89791457 1.0000 80 chr17:37037952-37038032 1.0000 80 chr7:32977401-32977481 1.0000 80 chr12:109034964-10903504 1.0000 80 chr11:46143393-46143473 1.0000 80 chr2:58467843-58467923 1.0000 80 chr19:47816539-47816619 1.0000 80 chr14:77506734-77506814 1.0000 80 chr4:83718286-83718366 1.0000 80 chr10:126236374-12623645 1.0000 80 chr17:56743903-56743983 1.0000 80 chr12:122240760-12224084 1.0000 80 chr16:1321986-1322066 1.0000 80 chr5:137801303-137801383 1.0000 80 chr4:175344413-175344493 1.0000 80 chr5:95064965-95065045 1.0000 80 chr17:29152862-29152942 1.0000 80 chrX:2171431-2171511 1.0000 80 chr15:67316845-67316925 1.0000 80 chr1:65290041-65290121 1.0000 80 chr16:50357491-50357571 1.0000 80 chr7:1577759-1577839 1.0000 80 chr2:202289228-202289308 1.0000 80 chr8:94986363-94986443 1.0000 80 chr5:158522001-158522081 1.0000 80 chr7:76026874-76026954 1.0000 80 chr3:185255434-185255514 1.0000 80 chr20:42212707-42212787 1.0000 80 chr1:179262709-179262789 1.0000 80 chr20:61408116-61408196 1.0000 80 chrX:65235334-65235414 1.0000 80 chr14:31496146-31496226 1.0000 80 chr11:66469463-66469543 1.0000 80 chr2:145116807-145116887 1.0000 80 chr2:223908910-223908990 1.0000 80 chr22:22020341-22020421 1.0000 80 chr22:30217520-30217600 1.0000 80 chr19:2236424-2236504 1.0000 80 chr1:59249620-59249700 1.0000 80 chr10:94517042-94517122 1.0000 80 chr3:139037429-139037509 1.0000 80 chr5:137803680-137803760 1.0000 80 chr22:22329783-22329863 1.0000 80 chr5:137514223-137514303 1.0000 80 chr3:45706792-45706872 1.0000 80 chr19:48835985-48836065 1.0000 80 chr20:35185041-35185121 1.0000 80 chr8:102064013-102064093 1.0000 80 chr16:15670622-15670702 1.0000 80 chrX:134124920-134125000 1.0000 80 chr22:21356491-21356571 1.0000 80 chr7:127438243-127438323 1.0000 80 chr14:35860332-35860412 1.0000 80 chr1:147735862-147735942 1.0000 80 chr20:32026413-32026493 1.0000 80 chr2:167230610-167230690 1.0000 80 chr5:60704503-60704583 1.0000 80 chr9:128003522-128003602 1.0000 80 chr1:15106962-15107042 1.0000 80 chr6:46378237-46378317 1.0000 80 chr7:116764834-116764914 1.0000 80 chr21:46493753-46493833 1.0000 80 chr6:26280762-26280842 1.0000 80 chr3:43746376-43746456 1.0000 80 chr19:49956903-49956983 1.0000 80 chr17:62502319-62502399 1.0000 80 chr15:93425478-93425558 1.0000 80 chr6:28303484-28303564 1.0000 80 chr11:65270525-65270605 1.0000 80 chr5:41747514-41747594 1.0000 80 chr17:57915297-57915377 1.0000 80 chr1:210547476-210547556 1.0000 80 chr2:97197955-97198035 1.0000 80 chr8:61720451-61720531 1.0000 80 chr3:195766391-195766471 1.0000 80 chr14:75743903-75743983 1.0000 80 chrX:135962793-135962873 1.0000 80 chr7:152011365-152011445 1.0000 80 chr1:68150903-68150983 1.0000 80 chr6:31704214-31704294 1.0000 80 chr5:109390100-109390180 1.0000 80 chr7:129063720-129063800 1.0000 80 chr11:120107395-12010747 1.0000 80 chr9:123659572-123659652 1.0000 80 chr17:17739713-17739793 1.0000 80 chr19:5718875-5718955 1.0000 80 chr7:106499578-106499658 1.0000 80 chr19:3194447-3194527 1.0000 80 chrX:41193436-41193516 1.0000 80 chr13:111365623-11136570 1.0000 80 chr5:90679070-90679150 1.0000 80 chr8:125827824-125827904 1.0000 80 chr12:46766461-46766541 1.0000 80 chr11:59313062-59313142 1.0000 80 chr10:23344522-23344602 1.0000 80 chr11:64008287-64008367 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_SMAD1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/SMAD1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.239 C 0.259 G 0.258 T 0.245 Background letter frequencies (from file dataset with add-one prior applied): A 0.239 C 0.259 G 0.258 T 0.245 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGCCARRH MEME-1 width = 8 sites = 179 llr = 1171 E-value = 1.0e-087 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2:::a524 pos.-specific C ::8a::22 probability G 1a2::551 matrix T 7:::::13 bits 2.1 * 1.9 * ** 1.7 * ** 1.4 * ** Relative 1.2 **** Entropy 1.0 ***** (9.4 bits) 0.8 ****** 0.6 ****** 0.4 ****** 0.2 ******** 0.0 -------- Multilevel TGCCAAGA consensus GAT sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:120667130-12066721 48 1.49e-05 GCTGGACAGG TGCCAAGA GAGAGGAGAT chr6:44072995-44073075 52 1.49e-05 GTTGGCAGCA TGCCAAGA CCAGGTCAGA chr11:110350665-11035074 55 1.49e-05 CTTGGCATTG TGCCAAGA GACTGCTTCT chr16:22291467-22291547 53 1.49e-05 CCTGGCAAGG TGCCAAGA CTGGCTAGAG chr1:46341829-46341909 28 1.49e-05 attggcagtg tgccaaga atggtttaaa chr15:64854353-64854433 41 1.49e-05 TTTGGCATAG TGCCAAGA ACATTGATAA chr6:86310604-86310684 55 1.49e-05 CTTGGCAAAT TGCCAAGA TTTTTCAAGG chr9:90431121-90431201 37 1.49e-05 tttggcaaag tgccaaga gcacacattg chr8:61664348-61664428 36 1.49e-05 GTTGGCAAAA TGCCAAGA AATTGACAGC chr11:59609972-59610052 32 1.49e-05 TCTGGCACAG TGCCAAGA TCGCTAGACT chr5:41747514-41747594 31 4.64e-05 gttggcactg tgccaagt gttagataaa chr19:48835985-48836065 31 4.64e-05 ACTGGACGTT TGCCAGGA GGCAGGGCTA chr22:22329783-22329863 57 4.64e-05 TTTGGCACAT TGCCAGGA GTGGAAGCAA chr7:32977401-32977481 34 4.64e-05 cttggcgagg tgccagga ctttgtccat chr1:166664501-166664581 54 4.64e-05 TCTGGCAGTC TGCCAAGT CAATAGCAGC chr2:219187489-219187569 44 4.64e-05 cctggcagag tgccaagt acataggagg chr11:86304092-86304172 53 4.64e-05 CTTGGCTCAC TGCCAGGA AAATGACTCA chr18:43336116-43336196 47 4.64e-05 GTTGGCACAG TGCCAGGA AACCTGGCTA chr19:7764401-7764481 55 4.64e-05 CCTGGCTCTG TGCCAGGA AAGTCAGTCC chr2:68815866-68815946 39 4.64e-05 TCTGGCATTT TGCCAAGT AATGAGTCTT chr10:49592797-49592877 28 4.64e-05 GTTGGCCAGG TGCCAAGT CCAGGAATGG chr8:29999281-29999361 47 4.64e-05 CCGGGCACAG TGCCAAGT ACAGGTTAGC chr11:72125370-72125450 56 4.64e-05 CCTGGCTGGC TGCCAGGA AACCTGTCAC chr12:66018481-66018561 35 4.64e-05 TTTGGCACTT TGCCAAGT TTTAGTTCTG chr11:123105928-12310600 50 4.64e-05 CCTGGCAGCG TGCCAAGT GCTCTTGAGT chr22:30217520-30217600 50 6.29e-05 cttggcagaa tgccaggt ccccggaaca chr5:176831285-176831365 51 6.29e-05 TCTGGCACTG TGCCAGGT CGCAGTACTC chr1:234659480-234659560 47 6.29e-05 GCTGGCAGGC TGCCAGGT TCCCTCGCCT chr3:195766391-195766471 44 7.67e-05 tttggccAGG TGCCAAAA CAAGTTTGTG chr8:102064013-102064093 20 7.67e-05 GCTGGATCGT TGCCAAAA GACAAGAGAA chr1:65290041-65290121 39 7.67e-05 CAGACAGACT TGCCAAAA AGTACATTGT chr4:83718286-83718366 34 7.67e-05 GCTGGCACCA TGCCAAAA AAGCCCTGTA chr9:101267344-101267424 15 7.67e-05 tttggcccaa tgccaaaa aaccccatag chr15:59048321-59048401 28 7.67e-05 CTTGGCACAG TGCCAAAA TATAGCCAAC chr10:22013821-22013901 60 7.67e-05 GCTGGCTTGC TGCCAAAA AGACAGTGCC chr1:11717870-11717950 50 7.67e-05 ttTGGCACTT TGCCAAAA ATGCTTCTCA chr5:81032043-81032123 46 7.67e-05 ATTGGCGCTA TGCCAAAA GCCCTGTTTG chr12:56544505-56544585 42 7.67e-05 CTTGGCAAAA TGCCAAAA ATGGGAAAAG chr7:129063720-129063800 23 1.37e-04 ATGGGCAGAT TGCCAAAT ATGCATTAAT chr5:109390100-109390180 49 1.37e-04 TTTGGCATCT TGCCAACA GCCTCAGTGT chr3:43746376-43746456 33 1.37e-04 TTTGGCTGGT TGCCAACA AAATTTTGAA chr8:94986363-94986443 51 1.37e-04 tttggcacct tgccaaca tcaggtactg chr5:153603039-153603119 53 1.37e-04 tttggctctg tgccagaa agcaccatga chr5:158769001-158769081 51 1.37e-04 ATGGGCTGTT TGCCAGAA AAGCCTTCTG chr22:41763247-41763327 52 1.37e-04 AGGCCCGCCC TGCCAAGC AGCGGGAAGG chr2:241543918-241543998 49 1.37e-04 CTTGGCTGTC TGCCAAGC AGTCACTCAG chr1:181096382-181096462 43 1.37e-04 cctggcactg tgccaagc agcctagact chr6:16006203-16006283 34 1.37e-04 tttggaactc tgccaaca aagaaggggg chr9:37349067-37349147 51 1.37e-04 CTTGGCACAA TGCCAAAT TGAATGAGGA chr10:89346132-89346212 50 1.37e-04 tttggcagcc tgccaaat CCTACTTATT chr12:121842705-12184278 29 1.37e-04 CCTGGCACTG TGCCAGAA AGAGAGCTGG chr1:183998460-183998540 20 1.37e-04 gctggcagct tgccaagc ctgctggttc chr7:104524719-104524799 51 1.37e-04 TTTGGCAGCT TGCCAAGC ATGTCCTCCT chr12:104781158-10478123 23 1.37e-04 GCTGGCAAAC TGCCAAAT TATTTCATCT chr21:35916382-35916462 31 1.37e-04 cttggcaact tgccagaa ttcttgccct chr1:27442893-27442973 37 1.37e-04 CCTGGCACAG TGCCAAGC ACCCTGAAGA chr20:32026413-32026493 48 2.01e-04 cttggctcta tgccaact ctccctccac chr7:76026874-76026954 31 2.01e-04 TCTGGCAGGC TGCCAGGC GGGGCTCGCC chr2:3629152-3629232 54 2.01e-04 TTTGGCTTTG TGCCAGAT TGCTTTCAGG chr16:15886611-15886691 52 2.01e-04 cttggctcag tgccaact ttctgcctcc chr18:28777857-28777937 66 2.01e-04 TTTGGCACAC TGCCAACT GAAACGT chr1:156093625-156093705 39 2.01e-04 CCTGGCCCCC TGCCAGGC CCAGCACTTC chr11:77941650-77941730 32 2.01e-04 cctggcatag tgccaggc atatgatagA chr5:10601544-10601624 33 2.01e-04 cctggctggg tgccaact cctcccagcc chr3:99587315-99587395 56 2.01e-04 TTTGGCACTG TGCCAACT GCTTCATCAC chr10:74124163-74124243 45 2.01e-04 GGAGCCTTCT TGCCAGCA GGTGGCACTT chr8:145129330-145129410 57 2.01e-04 ATTGGCCAAG TGCCAACT CAAAGAGGAT chr1:182299493-182299573 31 2.01e-04 cttggcatgg tgccaggc acaACATGAT chr6:80842846-80842926 48 2.01e-04 GTTGGCATTG TGCCAGCA CTTGAACTGC chr1:9621600-9621680 61 2.01e-04 TTTGGCTTTT TGCCAACT GTTATTATGT chr15:63729148-63729228 51 2.01e-04 ACTGGCCTGC TGCCAACT CCCCAGATCT chr19:49043019-49043099 59 2.01e-04 cttggcactg tgccaggc actgagtatg chr1:206629268-206629348 56 2.01e-04 CCTGGCCCCG TGCCAGCA GGATGACAAG chr6:118981537-118981617 61 2.01e-04 GTTGGCAGAT TGCCAGAT AAGGGGCCAT chr14:24895068-24895148 34 2.01e-04 CTTGGCACAG TGCCAGAT CTTCTTGGAA chr4:175344413-175344493 41 2.18e-04 TTTGGCAGTT TGCCAGCT CTTTGAATCT chr16:1321986-1322066 70 2.18e-04 GTTGGCACCC TGCCAGCT GGT chr14:77506734-77506814 19 2.18e-04 CAGTATAAAC TGCCAGCT TTAAGCAGCC chr5:76464869-76464949 37 2.18e-04 GTTGGCGCAG TGCCAGCT CCTGTCACTT chr1:159851803-159851883 30 2.18e-04 GCTGGCTCTC TGCCAGCT TGGCTCACTG chr1:114491900-114491980 50 2.18e-04 GTGCTCCCCC TGCCAGCT ATTTTTGGCA chr11:16864996-16865076 45 2.34e-04 TCTGGCTCAG TGCCAAGG GAGTCTAGGC chr2:179349546-179349626 1 2.34e-04 . TGCCAAGG AAAGTCATCA chr7:127438243-127438323 52 2.66e-04 ACTGGCAAGC TGCCAGGG GACATTTGTA chr3:139037429-139037509 29 2.66e-04 cctggcactg tgccaggg ctgtcatgcc chr14:31496146-31496226 26 2.66e-04 GCTGGCAAAT AGCCAAGA TCCTCCGGCT chr1:179262709-179262789 47 2.66e-04 CTTGGCAGGT TGCCAGGG CCAGCCTGCG chrX:2171431-2171511 37 2.66e-04 CATGGCCGTG AGCCAAGA TGTCGCGGCC chr17:37037952-37038032 27 2.66e-04 TCTGGCACTT TGCCAGGG AGTTGGGCCC chrX:2171188-2171268 33 2.66e-04 TATGGCAGTG AGCCAAGA TGGCGCCACT chr12:71988169-71988249 31 2.66e-04 gctggcatgc tgccaggg gtgttactct chr1:113601756-113601836 57 2.66e-04 TTTGGCATTG TGCCAGGG TCCTATTCAG chr8:130694423-130694503 67 2.66e-04 ATTGGCAAAA AGCCAAGA AAAGAC chr6:26280762-26280842 47 2.97e-04 TCTGGCACCA AGCCAGGA ACTATCACTT chr10:119171093-11917117 52 2.97e-04 GGTGGCAGCT AGCCAGGA AGGCCTGTGG chr5:158522001-158522081 39 3.28e-04 CCTGGCTTCC TGCCAAAC TTGGAGGCAA chr6:157738322-157738402 13 3.28e-04 gctgtcacac tgccaaac cgggtgaatc chr14:102176487-10217656 18 3.28e-04 TAGGTGGACC AGCCAGGT CACCTAGGCC chr1:61719210-61719290 66 3.28e-04 GGTGGCAGAG AGCCAGGT GAAGACT chr19:58111170-58111250 11 3.28e-04 GAGGCCCGTG AGCCAGGT TCTTGGCGTG chr10:18896617-18896697 49 3.76e-04 ATTGGCATGG GGCCaaga atacaggctt chr19:10382346-10382426 39 3.76e-04 CTTGGCTCTG TGCCAACC CAACAAGGCT chr5:60704503-60704583 63 4.41e-04 GGAGTCTGGC TGCCAGCC AAACCTTTGC chr19:47816539-47816619 51 4.41e-04 CTTGGCCGCC TGCCAGCC ATGCTGACCT chr15:68087312-68087392 32 4.41e-04 ATTGGCACCT TGCCAGCC ACCACCATTA chr17:43235952-43236032 30 4.41e-04 TTTGGCCTCT GGCCAAGT CAACCAAGTT chr9:130769938-130770018 42 4.41e-04 TCATGACTTT TGGCAAGA AGCCAGAAAT chr2:169290794-169290874 54 4.41e-04 CCTGGCATTT GGCCAAGT TCCCATTAAA chr1:15106962-15107042 24 5.05e-04 tggatggcct tggcaagt tgcataacat chr17:29152862-29152942 49 5.05e-04 AGAAGGGTGT TGGCAAGT GTTATCTGTA chr1:156586391-156586471 33 5.05e-04 TTGTTTGAGT TGGCAGGA AGCCAATCAG chr17:56468993-56469073 33 5.05e-04 TGTGTATCTT GGCCAGGT GCCCGAAATT chr6:37208115-37208195 28 5.05e-04 ctctgactgt tggcagga agccacagtt chr14:35860332-35860412 44 5.67e-04 tctggcactt tgccagag ctttacagac chr12:109034964-10903504 48 5.67e-04 GGGAGGCACC TGGCAGGT GGCCAGATCC chr1:14769765-14769845 36 5.67e-04 GGTGGCTGGC TGCCAGAG GGGCCACTGG chr5:131628968-131629048 39 5.67e-04 CTGGGCACTG AGCCAAAA AAAGGGAGGC chr1:224399468-224399548 46 5.67e-04 GTTGGCAGGA AGCCAAAA TGTTCAGCCC chr7:127443767-127443847 55 5.67e-04 TTTGGCAACC AGCCAAAA ATACCTTCCT chr2:202289228-202289308 54 6.58e-04 tttggcccac agccaaat ttggcttgcc chr7:12768909-12768989 66 6.58e-04 GCCCCAGCTG AGCCAACA GGCAGCC chr6:41246840-41246920 26 6.58e-04 attggccctg agccaagc agagacgacc chr14:39614699-39614779 46 6.58e-04 Tctggcccta agccaaat ttctgaagcc chr18:9575664-9575744 58 6.58e-04 actggaacac agccaagc ttgtccattt chr7:152011365-152011445 3 7.50e-04 TA AGCCAGAT AAGCACTTGA chr10:94517042-94517122 73 7.50e-04 AGATCTGCTC AGCCAACT chr14:74239040-74239120 42 7.50e-04 ATTGGCATTA TGCCAATT TTTACTATGG chr2:69690092-69690172 29 7.50e-04 CTTGGCACAG TGCCAATT ATTTATCTTT chr2:58467843-58467923 53 7.97e-04 CTTGGCAAAG GGCCAAAA TAAGGTTTTC chr2:58821453-58821533 54 7.97e-04 TCTGGCCCTG AGCCAGCT GATCTCATCC chr17:58719289-58719369 56 7.97e-04 ATTGGCTGTC TGCCAGTT TCCAAGGCAC chr7:75932796-75932876 30 7.97e-04 CCTGGCGCGG TGCCAGTT TCTAGCCGCT chr8:61720451-61720531 31 8.90e-04 TTTGGCAGAA GGCCAAAT TTGGGGTCAG chr6:2770624-2770704 33 8.90e-04 CCTGGCAGGG GGCCAGAA AGGGCCGGGC chr21:46493753-46493833 23 1.03e-03 AACCGTGTCC AGCCAGGG TCCTGGGCCG chr5:137801303-137801383 57 1.03e-03 CATGTAACCC GGCCAGGC CCCCGCAACT chr10:72108405-72108485 29 1.03e-03 CCTGGCTCTA GGCCAGGC CAGAGAAAGG chr12:1715285-1715365 32 1.03e-03 GCTGGCGCCA GGCCAGGC TTTGCTGGAA chr18:68132106-68132186 43 1.03e-03 CAAGACAGTA GGCCAGCA GAGGCCGCTG chr5:37413279-37413359 45 1.03e-03 AGAAGCTCTT TGGCAAGC ATCCAGTTTT chr13:67798485-67798565 49 1.03e-03 ATTGGCACCT GGCCAGCA CAAGCGACAT chr11:114030875-11403095 21 1.03e-03 CCTGGCTCCA GGCCAGGC CTGGCTGCGA chr20:42212707-42212787 52 1.12e-03 gcctgggagt tggcaggc agccagggca chr7:1577759-1577839 41 1.12e-03 AAGGTCGCCA TGGCAACT ATCGGAGGGC chr4:142834154-142834234 71 1.12e-03 CAGTAACTGT TGGCAGGC AG chr10:24672654-24672734 37 1.12e-03 GCTGGCACTG GGCCAGCT GGGTTGATGT chr22:50978204-50978284 3 1.12e-03 gc ggccagct aacgctcaat chr10:103305792-10330587 29 1.12e-03 tggacagatc tggcaggc agccaattca chr15:67316845-67316925 27 1.16e-03 GTGGACAGTT TGGCAGCT GAGGGAAAGA chr19:3194447-3194527 2 1.25e-03 T GGCCAGGG gccacctgtt chr2:167230610-167230690 32 1.25e-03 TTTGGCAGAG AGCCAGAC CTGACTCATC chrX:134124920-134125000 47 1.31e-03 GGGCGGAACC TGGCAGGG CGCCAGTGAC chr17:74410802-74410882 23 1.31e-03 GAGCTTGGCC TGGCAGGG GGCCAGCGGG chr5:108804595-108804675 20 1.31e-03 CTGTGGTTCT TGGCAGGG AGCCAACGTT chr11:65270525-65270605 40 1.48e-03 CTGTGCTGTG TGCCAATG TTTCGTTTGC chr11:66469463-66469543 20 1.48e-03 CCTGGCATGG GGCCAACC CTTTATCAGA chr19:40715176-40715256 31 1.48e-03 cctggcacca agccagag taacagcaag chr7:106499578-106499658 38 1.60e-03 CTTGGCTCCC GGCCAGCC CCAACACCCA chr1:151763157-151763237 14 1.60e-03 CCACCCTGTC AGCCAATA AGATCCAGGA chr4:74606347-74606427 57 1.69e-03 GTGGCTCTCT TGGCAGCC TTCCTGATTT chr7:2064084-2064164 55 1.69e-03 attggcggtg agccaatt tccttcaact chr17:44820332-44820412 24 1.69e-03 CTTGGCTCTG AGCCAATT TCCTCCTCAG chr9:128003522-128003602 7 1.77e-03 GGCGAA GGGCAGGT CTAGAAATAC chr6:28303484-28303564 73 1.85e-03 ccttctctgc tggcagag chr6:46378237-46378317 44 1.85e-03 TCTGGCCACA AGGCAAAA AGGCATGTCT chr5:145491182-145491262 12 1.85e-03 cgaccagaga aggcaaaa ggcagacctc chr9:96215549-96215629 23 1.85e-03 TCTGGCCCTT TGGCAGAG GGCTTCGCAG chr9:123659572-123659652 23 2.08e-03 GCTGGCCCAG AGGCAGAT GGGAGTCAGG chr15:93426047-93426127 36 2.08e-03 ATGGCCGGAG AGGCAGCA GCACCCCGAG chr8:125827824-125827904 2 2.13e-03 T TGGCAGTT AAGAAAATAG chr6:27099774-27099854 18 2.22e-03 GGCGTTGCCC GGGCAAAT TCAAACTGAC chr5:90679070-90679150 6 2.32e-03 AGTCA GGGCAGCA GAGGCTGCTG chr2:72998170-72998250 23 2.32e-03 AGTCACTAGG GGGCAGCA GAGCATAAAG chr1:210547476-210547556 33 2.40e-03 Tgcctcccca gggcaagg cttacaaaaa chr11:65269509-65269589 66 2.40e-03 GCATTAATTT GGGCAAGG AAAGTGT chr11:65194224-65194304 32 2.40e-03 AAACCACTCA AGCCAATG AAGGTGGGTG chr16:50357491-50357571 70 2.52e-03 GTAAACTATC TGCCATGA CAT chr2:62515198-62515278 56 2.52e-03 GTCTGTCTGG GGCCAGTC TCTCACCAGC chr1:113168503-113168583 57 2.61e-03 TCAATGTGGG AGGCAAAG ACAGTGAGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:120667130-12066721 1.5e-05 47_[+1]_25 chr6:44072995-44073075 1.5e-05 51_[+1]_21 chr11:110350665-11035074 1.5e-05 54_[+1]_18 chr16:22291467-22291547 1.5e-05 52_[+1]_20 chr1:46341829-46341909 1.5e-05 27_[+1]_45 chr15:64854353-64854433 1.5e-05 40_[+1]_32 chr6:86310604-86310684 1.5e-05 54_[+1]_18 chr9:90431121-90431201 1.5e-05 36_[+1]_36 chr8:61664348-61664428 1.5e-05 35_[+1]_37 chr11:59609972-59610052 1.5e-05 31_[+1]_41 chr5:41747514-41747594 4.6e-05 30_[+1]_42 chr19:48835985-48836065 4.6e-05 30_[+1]_42 chr22:22329783-22329863 4.6e-05 56_[+1]_16 chr7:32977401-32977481 4.6e-05 33_[+1]_39 chr1:166664501-166664581 4.6e-05 53_[+1]_19 chr2:219187489-219187569 4.6e-05 43_[+1]_29 chr11:86304092-86304172 4.6e-05 52_[+1]_20 chr18:43336116-43336196 4.6e-05 46_[+1]_26 chr19:7764401-7764481 4.6e-05 54_[+1]_18 chr2:68815866-68815946 4.6e-05 38_[+1]_34 chr10:49592797-49592877 4.6e-05 27_[+1]_45 chr8:29999281-29999361 4.6e-05 46_[+1]_26 chr11:72125370-72125450 4.6e-05 55_[+1]_17 chr12:66018481-66018561 4.6e-05 34_[+1]_38 chr11:123105928-12310600 4.6e-05 49_[+1]_23 chr22:30217520-30217600 6.3e-05 49_[+1]_23 chr5:176831285-176831365 6.3e-05 50_[+1]_22 chr1:234659480-234659560 6.3e-05 46_[+1]_26 chr3:195766391-195766471 7.7e-05 43_[+1]_29 chr8:102064013-102064093 7.7e-05 19_[+1]_53 chr1:65290041-65290121 7.7e-05 38_[+1]_34 chr4:83718286-83718366 7.7e-05 33_[+1]_39 chr9:101267344-101267424 7.7e-05 14_[+1]_58 chr15:59048321-59048401 7.7e-05 27_[+1]_45 chr10:22013821-22013901 7.7e-05 59_[+1]_13 chr1:11717870-11717950 7.7e-05 49_[+1]_23 chr5:81032043-81032123 7.7e-05 45_[+1]_27 chr12:56544505-56544585 7.7e-05 41_[+1]_31 chr7:129063720-129063800 0.00014 22_[+1]_50 chr5:109390100-109390180 0.00014 48_[+1]_24 chr3:43746376-43746456 0.00014 32_[+1]_40 chr8:94986363-94986443 0.00014 50_[+1]_22 chr5:153603039-153603119 0.00014 52_[+1]_20 chr5:158769001-158769081 0.00014 50_[+1]_22 chr22:41763247-41763327 0.00014 51_[+1]_21 chr2:241543918-241543998 0.00014 48_[+1]_24 chr1:181096382-181096462 0.00014 42_[+1]_30 chr6:16006203-16006283 0.00014 33_[+1]_39 chr9:37349067-37349147 0.00014 50_[+1]_22 chr10:89346132-89346212 0.00014 49_[+1]_23 chr12:121842705-12184278 0.00014 28_[+1]_44 chr1:183998460-183998540 0.00014 19_[+1]_53 chr7:104524719-104524799 0.00014 50_[+1]_22 chr12:104781158-10478123 0.00014 22_[+1]_50 chr21:35916382-35916462 0.00014 30_[+1]_42 chr1:27442893-27442973 0.00014 36_[+1]_36 chr20:32026413-32026493 0.0002 47_[+1]_25 chr7:76026874-76026954 0.0002 30_[+1]_42 chr2:3629152-3629232 0.0002 53_[+1]_19 chr16:15886611-15886691 0.0002 51_[+1]_21 chr18:28777857-28777937 0.0002 65_[+1]_7 chr1:156093625-156093705 0.0002 38_[+1]_34 chr11:77941650-77941730 0.0002 31_[+1]_41 chr5:10601544-10601624 0.0002 32_[+1]_40 chr3:99587315-99587395 0.0002 55_[+1]_17 chr10:74124163-74124243 0.0002 44_[+1]_28 chr8:145129330-145129410 0.0002 56_[+1]_16 chr1:182299493-182299573 0.0002 30_[+1]_42 chr6:80842846-80842926 0.0002 47_[+1]_25 chr1:9621600-9621680 0.0002 60_[+1]_12 chr15:63729148-63729228 0.0002 50_[+1]_22 chr19:49043019-49043099 0.0002 58_[+1]_14 chr1:206629268-206629348 0.0002 55_[+1]_17 chr6:118981537-118981617 0.0002 60_[+1]_12 chr14:24895068-24895148 0.0002 33_[+1]_39 chr4:175344413-175344493 0.00022 40_[+1]_32 chr16:1321986-1322066 0.00022 69_[+1]_3 chr14:77506734-77506814 0.00022 18_[+1]_54 chr5:76464869-76464949 0.00022 36_[+1]_36 chr1:159851803-159851883 0.00022 29_[+1]_43 chr1:114491900-114491980 0.00022 49_[+1]_23 chr11:16864996-16865076 0.00023 44_[+1]_28 chr2:179349546-179349626 0.00023 [+1]_72 chr7:127438243-127438323 0.00027 51_[+1]_21 chr3:139037429-139037509 0.00027 28_[+1]_44 chr14:31496146-31496226 0.00027 25_[+1]_47 chr1:179262709-179262789 0.00027 46_[+1]_26 chrX:2171431-2171511 0.00027 36_[+1]_36 chr17:37037952-37038032 0.00027 26_[+1]_46 chrX:2171188-2171268 0.00027 32_[+1]_40 chr12:71988169-71988249 0.00027 30_[+1]_42 chr1:113601756-113601836 0.00027 56_[+1]_16 chr8:130694423-130694503 0.00027 66_[+1]_6 chr6:26280762-26280842 0.0003 46_[+1]_26 chr10:119171093-11917117 0.0003 51_[+1]_21 chr5:158522001-158522081 0.00033 38_[+1]_34 chr6:157738322-157738402 0.00033 12_[+1]_60 chr14:102176487-10217656 0.00033 17_[+1]_55 chr1:61719210-61719290 0.00033 65_[+1]_7 chr19:58111170-58111250 0.00033 10_[+1]_62 chr10:18896617-18896697 0.00038 48_[+1]_24 chr19:10382346-10382426 0.00038 38_[+1]_34 chr5:60704503-60704583 0.00044 62_[+1]_10 chr19:47816539-47816619 0.00044 50_[+1]_22 chr15:68087312-68087392 0.00044 31_[+1]_41 chr17:43235952-43236032 0.00044 29_[+1]_43 chr9:130769938-130770018 0.00044 41_[+1]_31 chr2:169290794-169290874 0.00044 53_[+1]_19 chr1:15106962-15107042 0.00051 23_[+1]_49 chr17:29152862-29152942 0.00051 48_[+1]_24 chr1:156586391-156586471 0.00051 32_[+1]_40 chr17:56468993-56469073 0.00051 32_[+1]_40 chr6:37208115-37208195 0.00051 27_[+1]_45 chr14:35860332-35860412 0.00057 43_[+1]_29 chr12:109034964-10903504 0.00057 47_[+1]_25 chr1:14769765-14769845 0.00057 35_[+1]_37 chr5:131628968-131629048 0.00057 38_[+1]_34 chr1:224399468-224399548 0.00057 45_[+1]_27 chr7:127443767-127443847 0.00057 54_[+1]_18 chr2:202289228-202289308 0.00066 53_[+1]_19 chr7:12768909-12768989 0.00066 65_[+1]_7 chr6:41246840-41246920 0.00066 25_[+1]_47 chr14:39614699-39614779 0.00066 45_[+1]_27 chr18:9575664-9575744 0.00066 57_[+1]_15 chr7:152011365-152011445 0.00075 2_[+1]_70 chr10:94517042-94517122 0.00075 72_[+1] chr14:74239040-74239120 0.00075 41_[+1]_31 chr2:69690092-69690172 0.00075 28_[+1]_44 chr2:58467843-58467923 0.0008 52_[+1]_20 chr2:58821453-58821533 0.0008 53_[+1]_19 chr17:58719289-58719369 0.0008 55_[+1]_17 chr7:75932796-75932876 0.0008 29_[+1]_43 chr8:61720451-61720531 0.00089 30_[+1]_42 chr6:2770624-2770704 0.00089 32_[+1]_40 chr21:46493753-46493833 0.001 22_[+1]_50 chr5:137801303-137801383 0.001 56_[+1]_16 chr10:72108405-72108485 0.001 28_[+1]_44 chr12:1715285-1715365 0.001 31_[+1]_41 chr18:68132106-68132186 0.001 42_[+1]_30 chr5:37413279-37413359 0.001 44_[+1]_28 chr13:67798485-67798565 0.001 48_[+1]_24 chr11:114030875-11403095 0.001 20_[+1]_52 chr20:42212707-42212787 0.0011 51_[+1]_21 chr7:1577759-1577839 0.0011 40_[+1]_32 chr4:142834154-142834234 0.0011 70_[+1]_2 chr10:24672654-24672734 0.0011 36_[+1]_36 chr22:50978204-50978284 0.0011 2_[+1]_70 chr10:103305792-10330587 0.0011 28_[+1]_44 chr15:67316845-67316925 0.0012 26_[+1]_46 chr19:3194447-3194527 0.0012 1_[+1]_71 chr2:167230610-167230690 0.0012 31_[+1]_41 chrX:134124920-134125000 0.0013 46_[+1]_26 chr17:74410802-74410882 0.0013 22_[+1]_50 chr5:108804595-108804675 0.0013 19_[+1]_53 chr11:65270525-65270605 0.0015 39_[+1]_33 chr11:66469463-66469543 0.0015 19_[+1]_53 chr19:40715176-40715256 0.0015 30_[+1]_42 chr7:106499578-106499658 0.0016 37_[+1]_35 chr1:151763157-151763237 0.0016 13_[+1]_59 chr4:74606347-74606427 0.0017 56_[+1]_16 chr7:2064084-2064164 0.0017 54_[+1]_18 chr17:44820332-44820412 0.0017 23_[+1]_49 chr9:128003522-128003602 0.0018 6_[+1]_66 chr6:28303484-28303564 0.0019 72_[+1] chr6:46378237-46378317 0.0019 43_[+1]_29 chr5:145491182-145491262 0.0019 11_[+1]_61 chr9:96215549-96215629 0.0019 22_[+1]_50 chr9:123659572-123659652 0.0021 22_[+1]_50 chr15:93426047-93426127 0.0021 35_[+1]_37 chr8:125827824-125827904 0.0021 1_[+1]_71 chr6:27099774-27099854 0.0022 17_[+1]_55 chr5:90679070-90679150 0.0023 5_[+1]_67 chr2:72998170-72998250 0.0023 22_[+1]_50 chr1:210547476-210547556 0.0024 32_[+1]_40 chr11:65269509-65269589 0.0024 65_[+1]_7 chr11:65194224-65194304 0.0024 31_[+1]_41 chr16:50357491-50357571 0.0025 69_[+1]_3 chr2:62515198-62515278 0.0025 55_[+1]_17 chr1:113168503-113168583 0.0026 56_[+1]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCCARRH width=8 seqs=179 chr12:120667130-12066721 ( 48) TGCCAAGA 1 chr6:44072995-44073075 ( 52) TGCCAAGA 1 chr11:110350665-11035074 ( 55) TGCCAAGA 1 chr16:22291467-22291547 ( 53) TGCCAAGA 1 chr1:46341829-46341909 ( 28) TGCCAAGA 1 chr15:64854353-64854433 ( 41) TGCCAAGA 1 chr6:86310604-86310684 ( 55) TGCCAAGA 1 chr9:90431121-90431201 ( 37) TGCCAAGA 1 chr8:61664348-61664428 ( 36) TGCCAAGA 1 chr11:59609972-59610052 ( 32) TGCCAAGA 1 chr5:41747514-41747594 ( 31) TGCCAAGT 1 chr19:48835985-48836065 ( 31) TGCCAGGA 1 chr22:22329783-22329863 ( 57) TGCCAGGA 1 chr7:32977401-32977481 ( 34) TGCCAGGA 1 chr1:166664501-166664581 ( 54) TGCCAAGT 1 chr2:219187489-219187569 ( 44) TGCCAAGT 1 chr11:86304092-86304172 ( 53) TGCCAGGA 1 chr18:43336116-43336196 ( 47) TGCCAGGA 1 chr19:7764401-7764481 ( 55) TGCCAGGA 1 chr2:68815866-68815946 ( 39) TGCCAAGT 1 chr10:49592797-49592877 ( 28) TGCCAAGT 1 chr8:29999281-29999361 ( 47) TGCCAAGT 1 chr11:72125370-72125450 ( 56) TGCCAGGA 1 chr12:66018481-66018561 ( 35) TGCCAAGT 1 chr11:123105928-12310600 ( 50) TGCCAAGT 1 chr22:30217520-30217600 ( 50) TGCCAGGT 1 chr5:176831285-176831365 ( 51) TGCCAGGT 1 chr1:234659480-234659560 ( 47) TGCCAGGT 1 chr3:195766391-195766471 ( 44) TGCCAAAA 1 chr8:102064013-102064093 ( 20) TGCCAAAA 1 chr1:65290041-65290121 ( 39) TGCCAAAA 1 chr4:83718286-83718366 ( 34) TGCCAAAA 1 chr9:101267344-101267424 ( 15) TGCCAAAA 1 chr15:59048321-59048401 ( 28) TGCCAAAA 1 chr10:22013821-22013901 ( 60) TGCCAAAA 1 chr1:11717870-11717950 ( 50) TGCCAAAA 1 chr5:81032043-81032123 ( 46) TGCCAAAA 1 chr12:56544505-56544585 ( 42) TGCCAAAA 1 chr7:129063720-129063800 ( 23) TGCCAAAT 1 chr5:109390100-109390180 ( 49) TGCCAACA 1 chr3:43746376-43746456 ( 33) TGCCAACA 1 chr8:94986363-94986443 ( 51) TGCCAACA 1 chr5:153603039-153603119 ( 53) TGCCAGAA 1 chr5:158769001-158769081 ( 51) TGCCAGAA 1 chr22:41763247-41763327 ( 52) TGCCAAGC 1 chr2:241543918-241543998 ( 49) TGCCAAGC 1 chr1:181096382-181096462 ( 43) TGCCAAGC 1 chr6:16006203-16006283 ( 34) TGCCAACA 1 chr9:37349067-37349147 ( 51) TGCCAAAT 1 chr10:89346132-89346212 ( 50) TGCCAAAT 1 chr12:121842705-12184278 ( 29) TGCCAGAA 1 chr1:183998460-183998540 ( 20) TGCCAAGC 1 chr7:104524719-104524799 ( 51) TGCCAAGC 1 chr12:104781158-10478123 ( 23) TGCCAAAT 1 chr21:35916382-35916462 ( 31) TGCCAGAA 1 chr1:27442893-27442973 ( 37) TGCCAAGC 1 chr20:32026413-32026493 ( 48) TGCCAACT 1 chr7:76026874-76026954 ( 31) TGCCAGGC 1 chr2:3629152-3629232 ( 54) TGCCAGAT 1 chr16:15886611-15886691 ( 52) TGCCAACT 1 chr18:28777857-28777937 ( 66) TGCCAACT 1 chr1:156093625-156093705 ( 39) TGCCAGGC 1 chr11:77941650-77941730 ( 32) TGCCAGGC 1 chr5:10601544-10601624 ( 33) TGCCAACT 1 chr3:99587315-99587395 ( 56) TGCCAACT 1 chr10:74124163-74124243 ( 45) TGCCAGCA 1 chr8:145129330-145129410 ( 57) TGCCAACT 1 chr1:182299493-182299573 ( 31) TGCCAGGC 1 chr6:80842846-80842926 ( 48) TGCCAGCA 1 chr1:9621600-9621680 ( 61) TGCCAACT 1 chr15:63729148-63729228 ( 51) TGCCAACT 1 chr19:49043019-49043099 ( 59) TGCCAGGC 1 chr1:206629268-206629348 ( 56) TGCCAGCA 1 chr6:118981537-118981617 ( 61) TGCCAGAT 1 chr14:24895068-24895148 ( 34) TGCCAGAT 1 chr4:175344413-175344493 ( 41) TGCCAGCT 1 chr16:1321986-1322066 ( 70) TGCCAGCT 1 chr14:77506734-77506814 ( 19) TGCCAGCT 1 chr5:76464869-76464949 ( 37) TGCCAGCT 1 chr1:159851803-159851883 ( 30) TGCCAGCT 1 chr1:114491900-114491980 ( 50) TGCCAGCT 1 chr11:16864996-16865076 ( 45) TGCCAAGG 1 chr2:179349546-179349626 ( 1) TGCCAAGG 1 chr7:127438243-127438323 ( 52) TGCCAGGG 1 chr3:139037429-139037509 ( 29) TGCCAGGG 1 chr14:31496146-31496226 ( 26) AGCCAAGA 1 chr1:179262709-179262789 ( 47) TGCCAGGG 1 chrX:2171431-2171511 ( 37) AGCCAAGA 1 chr17:37037952-37038032 ( 27) TGCCAGGG 1 chrX:2171188-2171268 ( 33) AGCCAAGA 1 chr12:71988169-71988249 ( 31) TGCCAGGG 1 chr1:113601756-113601836 ( 57) TGCCAGGG 1 chr8:130694423-130694503 ( 67) AGCCAAGA 1 chr6:26280762-26280842 ( 47) AGCCAGGA 1 chr10:119171093-11917117 ( 52) AGCCAGGA 1 chr5:158522001-158522081 ( 39) TGCCAAAC 1 chr6:157738322-157738402 ( 13) TGCCAAAC 1 chr14:102176487-10217656 ( 18) AGCCAGGT 1 chr1:61719210-61719290 ( 66) AGCCAGGT 1 chr19:58111170-58111250 ( 11) AGCCAGGT 1 chr10:18896617-18896697 ( 49) GGCCAAGA 1 chr19:10382346-10382426 ( 39) TGCCAACC 1 chr5:60704503-60704583 ( 63) TGCCAGCC 1 chr19:47816539-47816619 ( 51) TGCCAGCC 1 chr15:68087312-68087392 ( 32) TGCCAGCC 1 chr17:43235952-43236032 ( 30) GGCCAAGT 1 chr9:130769938-130770018 ( 42) TGGCAAGA 1 chr2:169290794-169290874 ( 54) GGCCAAGT 1 chr1:15106962-15107042 ( 24) TGGCAAGT 1 chr17:29152862-29152942 ( 49) TGGCAAGT 1 chr1:156586391-156586471 ( 33) TGGCAGGA 1 chr17:56468993-56469073 ( 33) GGCCAGGT 1 chr6:37208115-37208195 ( 28) TGGCAGGA 1 chr14:35860332-35860412 ( 44) TGCCAGAG 1 chr12:109034964-10903504 ( 48) TGGCAGGT 1 chr1:14769765-14769845 ( 36) TGCCAGAG 1 chr5:131628968-131629048 ( 39) AGCCAAAA 1 chr1:224399468-224399548 ( 46) AGCCAAAA 1 chr7:127443767-127443847 ( 55) AGCCAAAA 1 chr2:202289228-202289308 ( 54) AGCCAAAT 1 chr7:12768909-12768989 ( 66) AGCCAACA 1 chr6:41246840-41246920 ( 26) AGCCAAGC 1 chr14:39614699-39614779 ( 46) AGCCAAAT 1 chr18:9575664-9575744 ( 58) AGCCAAGC 1 chr7:152011365-152011445 ( 3) AGCCAGAT 1 chr10:94517042-94517122 ( 73) AGCCAACT 1 chr14:74239040-74239120 ( 42) TGCCAATT 1 chr2:69690092-69690172 ( 29) TGCCAATT 1 chr2:58467843-58467923 ( 53) GGCCAAAA 1 chr2:58821453-58821533 ( 54) AGCCAGCT 1 chr17:58719289-58719369 ( 56) TGCCAGTT 1 chr7:75932796-75932876 ( 30) TGCCAGTT 1 chr8:61720451-61720531 ( 31) GGCCAAAT 1 chr6:2770624-2770704 ( 33) GGCCAGAA 1 chr21:46493753-46493833 ( 23) AGCCAGGG 1 chr5:137801303-137801383 ( 57) GGCCAGGC 1 chr10:72108405-72108485 ( 29) GGCCAGGC 1 chr12:1715285-1715365 ( 32) GGCCAGGC 1 chr18:68132106-68132186 ( 43) GGCCAGCA 1 chr5:37413279-37413359 ( 45) TGGCAAGC 1 chr13:67798485-67798565 ( 49) GGCCAGCA 1 chr11:114030875-11403095 ( 21) GGCCAGGC 1 chr20:42212707-42212787 ( 52) TGGCAGGC 1 chr7:1577759-1577839 ( 41) TGGCAACT 1 chr4:142834154-142834234 ( 71) TGGCAGGC 1 chr10:24672654-24672734 ( 37) GGCCAGCT 1 chr22:50978204-50978284 ( 3) GGCCAGCT 1 chr10:103305792-10330587 ( 29) TGGCAGGC 1 chr15:67316845-67316925 ( 27) TGGCAGCT 1 chr19:3194447-3194527 ( 2) GGCCAGGG 1 chr2:167230610-167230690 ( 32) AGCCAGAC 1 chrX:134124920-134125000 ( 47) TGGCAGGG 1 chr17:74410802-74410882 ( 23) TGGCAGGG 1 chr5:108804595-108804675 ( 20) TGGCAGGG 1 chr11:65270525-65270605 ( 40) TGCCAATG 1 chr11:66469463-66469543 ( 20) GGCCAACC 1 chr19:40715176-40715256 ( 31) AGCCAGAG 1 chr7:106499578-106499658 ( 38) GGCCAGCC 1 chr1:151763157-151763237 ( 14) AGCCAATA 1 chr4:74606347-74606427 ( 57) TGGCAGCC 1 chr7:2064084-2064164 ( 55) AGCCAATT 1 chr17:44820332-44820412 ( 24) AGCCAATT 1 chr9:128003522-128003602 ( 7) GGGCAGGT 1 chr6:28303484-28303564 ( 73) TGGCAGAG 1 chr6:46378237-46378317 ( 44) AGGCAAAA 1 chr5:145491182-145491262 ( 12) AGGCAAAA 1 chr9:96215549-96215629 ( 23) TGGCAGAG 1 chr9:123659572-123659652 ( 23) AGGCAGAT 1 chr15:93426047-93426127 ( 36) AGGCAGCA 1 chr8:125827824-125827904 ( 2) TGGCAGTT 1 chr6:27099774-27099854 ( 18) GGGCAAAT 1 chr5:90679070-90679150 ( 6) GGGCAGCA 1 chr2:72998170-72998250 ( 23) GGGCAGCA 1 chr1:210547476-210547556 ( 33) GGGCAAGG 1 chr11:65269509-65269589 ( 66) GGGCAAGG 1 chr11:65194224-65194304 ( 32) AGCCAATG 1 chr16:50357491-50357571 ( 70) TGCCATGA 1 chr2:62515198-62515278 ( 56) GGCCAGTC 1 chr1:113168503-113168583 ( 57) AGGCAAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.70577 E= 1.0e-087 -42 -1413 -88 148 -1413 -1413 196 -1413 -1413 169 -62 -1413 -1413 195 -1413 -1413 206 -1413 -1413 -1413 110 -1413 90 -545 1 -21 88 -199 56 -53 -100 48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 179 E= 1.0e-087 0.178771 0.000000 0.139665 0.681564 0.000000 0.000000 1.000000 0.000000 0.000000 0.832402 0.167598 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.513966 0.000000 0.480447 0.005587 0.240223 0.223464 0.474860 0.061453 0.351955 0.178771 0.128492 0.340782 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARRH MEME-1 regular expression -------------------------------------------------------------------------------- TGCCA[AG][GAC][AT] -------------------------------------------------------------------------------- Time 5.00 secs. ******************************************************************************** ******************************************************************************** MOTIF YYTGGCAC MEME-2 width = 8 sites = 147 llr = 1018 E-value = 3.0e-073 ******************************************************************************** -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:::::61 pos.-specific C 45:::a15 probability G 2::aa::2 matrix T 35a:::32 bits 2.1 * 1.9 **** 1.7 **** 1.4 **** Relative 1.2 **** Entropy 1.0 ***** (10.0 bits) 0.8 ***** 0.6 ****** 0.4 ****** 0.2 ******** 0.0 -------- Multilevel CTTGGCAC consensus TC TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:223908910-223908990 14 1.66e-05 tggctgtgtg cttggcac agttccaagc chr6:27099774-27099854 47 1.66e-05 ACCGCTGCAA CTTGGCAC TGTTCCAAAT chr11:57019378-57019458 36 1.66e-05 tttcactgga cttggcac ggtgcccatg chr9:37349067-37349147 41 1.66e-05 GAACACAGTA CTTGGCAC AATGCCAAAT chr15:59048321-59048401 18 1.66e-05 CCAGCTCAAC CTTGGCAC AGTGCCAAAA chr2:69690092-69690172 19 1.66e-05 AAAACCAAAC CTTGGCAC AGTGCCAATT chr19:49043019-49043099 49 1.66e-05 gtgcagatct cttggcac tgtgccaggc chr14:24895068-24895148 24 1.66e-05 ATCTTTCATT CTTGGCAC AGTGCCAGAT chr3:139037429-139037509 19 3.41e-05 tggccagaca cctggcac tgtgccaggg chr2:62515198-62515278 30 3.41e-05 GCCTCAGTGT CCTGGCAC TGTGCCCAGT chr1:181096382-181096462 33 3.41e-05 ctatggagca cctggcac tgtgccaagc chr19:40715176-40715256 21 3.41e-05 gatgtttata cctggcac caagccagag chr12:121842705-12184278 19 3.41e-05 ATTTGAAAAT CCTGGCAC TGTGCCAGAA chr1:27442893-27442973 27 3.41e-05 GGCCCAGAAT CCTGGCAC AGTGCCAAGC chr22:22329783-22329863 47 4.98e-05 GAACCCCAGC TTTGGCAC ATTGCCAGGA chr8:94986363-94986443 41 4.98e-05 agtggctgtt tttggcac cttgccaaca chr18:28777857-28777937 56 4.98e-05 TCACTGTATA TTTGGCAC ACTGCCAACT chr3:99587315-99587395 46 4.98e-05 CTGCTATAGG TTTGGCAC TGTGCCAACT chr1:11717870-11717950 40 4.98e-05 cctaaaacat ttTGGCAC TTTGCCAAAA chr12:66018481-66018561 25 4.98e-05 ATTTTCACTT TTTGGCAC TTTGCCAAGT chr6:26280762-26280842 37 6.64e-05 GCCTCCAACA TCTGGCAC CAAGCCAGGA chr14:35860332-35860412 34 6.64e-05 ctactatgtg tctggcac tttgccagag chr20:35185041-35185121 4 6.64e-05 AAA TCTGGCAC AAAGCCACAA chr17:29152862-29152942 24 6.64e-05 GGACAGCAAT TCTGGCAC AAGTCCAAGA chr17:37037952-37038032 17 6.64e-05 CGTGGTTTCT TCTGGCAC TTTGCCAGGG chr5:176831285-176831365 41 6.64e-05 TGGGTTGGGG TCTGGCAC TGTGCCAGGT chr11:59609972-59610052 22 6.64e-05 TCAGAGTTCT TCTGGCAC AGTGCCAAGA chr22:30217520-30217600 40 8.29e-05 atgtggagtg cttggcag aatgccaggt chr1:179262709-179262789 37 8.29e-05 GAGAAGCTTC CTTGGCAG GTTGCCAGGG chr14:77506734-77506814 60 8.29e-05 TCCTTCCAAA CTTGGCAG CCGTTCAAAG chr7:106499578-106499658 28 1.34e-04 CAGAAAAGCA CTTGGCTC CCGGCCAGCC chr5:41747514-41747594 21 1.34e-04 ctgagtatgg gttggcac tgtgccaagt chr20:32026413-32026493 38 1.34e-04 atcaggtctg cttggctc tatgccaact chr16:1321986-1322066 60 1.34e-04 CCTCTGCATG GTTGGCAC CCTGCCAGCT chr1:113168503-113168583 21 1.34e-04 CCAGCACATT CTTGGCTC CTTGCCACAT chr16:15886611-15886691 42 1.34e-04 gtggtgcagt cttggctc agtgccaact chr6:147021344-147021424 22 1.34e-04 TTTACCCATT CTTGGCTC CTGGCCATGT chr2:219187489-219187569 34 1.34e-04 ctcctcagag cctggcag agtgccaagt chr11:86304092-86304172 43 1.34e-04 TGACTGTGGC CTTGGCTC ACTGCCAGGA chr18:43336116-43336196 37 1.34e-04 GCAGAGAAAA GTTGGCAC AGTGCCAGGA chr6:2770624-2770704 23 1.34e-04 CAGAGAGTCT CCTGGCAG GGGGCCAGAA chr3:40761566-40761646 54 1.34e-04 aggtcaacca cttggctc tcttccaaat chr19:10382346-10382426 29 1.34e-04 GGTTTGGGAA CTTGGCTC TGTGCCAACC chr17:44820332-44820412 14 1.34e-04 GCTTCTTACT CTTGGCTC TGAGCCAATT chr11:123105928-12310600 40 1.34e-04 GCGATCTGGG CCTGGCAG CGTGCCAAGT chr8:61720451-61720531 21 1.65e-04 ACACTGTGGG TTTGGCAG AAGGCCAAAT chr7:116764834-116764914 48 1.65e-04 AGGACAGCCA TTTGGCAG TGTGCCCAGA chr2:167230610-167230690 22 1.65e-04 CCAAGATGCT TTTGGCAG AGAGCCAGAC chr4:175344413-175344493 31 1.65e-04 GAATTTCCGA TTTGGCAG TTTGCCAGCT chr11:110350665-11035074 45 1.65e-04 CTCAGTCTGA CTTGGCAT TGTGCCAAGA chr1:182299493-182299573 21 1.65e-04 gttgtaagtg cttggcat ggtgccaggc chr10:89346132-89346212 40 1.65e-04 ccctaggtaa tttggcag cctgccaaat chr7:104524719-104524799 41 1.65e-04 AGGCCTTTGT TTTGGCAG CTTGCCAAGC chr2:169290794-169290874 24 1.65e-04 ACAAGACAAG CTTGGCAT ATGGCCAAGT chr14:75743903-75743983 71 2.01e-04 AGCAGGATCT CCTGGCTC CC chr10:94517042-94517122 32 2.01e-04 CTGCCTCAGG CCTGGCTC CGCCCTGTTG chr4:83718286-83718366 24 2.01e-04 GGCATTTGCA GCTGGCAC CATGCCAAAA chr10:72108405-72108485 19 2.01e-04 TGCCTAGGTG CCTGGCTC TAGGCCAGGC chr1:201885867-201885947 30 2.01e-04 CTGACCTTCG CCTGGCTC TGTTCCAGCA chr10:24672654-24672734 27 2.01e-04 AGAAAATGAG GCTGGCAC TGGGCCAGCT chr5:145491182-145491262 36 2.01e-04 cctctgtggt gctggcac tgtgccattc chr9:96215549-96215629 40 2.01e-04 GGGCTTCGCA GCTGGCAC TGGGCCAGAG chr19:7764401-7764481 45 2.01e-04 GCCACTCCTT CCTGGCTC TGTGCCAGGA chr1:224392636-224392716 26 2.01e-04 TCTCCGAGGG CCTGGCTC TGCGCCAGCC chr11:114030875-11403095 11 2.01e-04 TTATTGTAGT CCTGGCTC CAGGCCAGGC chr17:61753471-61753551 27 2.01e-04 CACAATAGCC GCTGGCAC ATAGCCCATC chr11:66469463-66469543 10 2.50e-04 AAACTAGAC CCTGGCAT GGGGCCAACC chr7:76026874-76026954 21 2.50e-04 CAGCCCAGGC TCTGGCAG GCTGCCAGGC chr4:142834154-142834234 14 2.50e-04 GAGACGTCCA CCTGGCAT ATCCTATAGC chr1:166664501-166664581 44 2.50e-04 GCTGGTAAAA TCTGGCAG TCTGCCAAGT chr5:153603039-153603119 43 2.50e-04 aacatttatt tttggctc tgtgccagaa chr11:77941650-77941730 22 2.50e-04 tatcctgtac cctggcat agtgccaggc chr1:114491900-114491980 22 2.50e-04 CAGTTTTTAT TTTGGCTC ATTGCCAGTT chr5:81032043-81032123 68 2.50e-04 TGTTTGCTTT TCTggcag ggttt chr5:109390100-109390180 39 2.65e-04 CTCCTGATGT TTTGGCAT CTTGCCAACA chr1:113601756-113601836 47 2.65e-04 AGTCTGGCTG TTTGGCAT TGTGCCAGGG chr2:179349546-179349626 33 2.65e-04 TGTCGTCAGC TTTGGCAT GGAGCCAAGT chr15:64854353-64854433 31 2.65e-04 TATTTCTCAG TTTGGCAT AGTGCCAAGA chr11:16864996-16865076 35 2.82e-04 TCTGAGTCCA TCTGGCTC AGTGCCAAGG chr10:74124163-74124243 6 2.82e-04 CCTTC TCTGGCTC TGGGCCAATG chr20:42212707-42212787 5 3.46e-04 gaca gttggcag ttgttgatct chr2:58467843-58467923 43 3.46e-04 GTACATACGA CTTGGCAA AGGGCCAAAA chr6:37208115-37208195 50 3.46e-04 acagttcttt cttggctg ttggccagag chr6:44072995-44073075 42 3.46e-04 GTCGCAAGAA GTTGGCAG CATGCCAAGA chr1:224399468-224399548 36 3.46e-04 GTGAGTCAAG GTTGGCAG GAAGCCAAAA chr2:68815866-68815946 29 3.46e-04 AACATGAAAT TCTGGCAT TTTGCCAAGT chr2:241543918-241543998 39 3.46e-04 TCCGGCCTCT CTTGGCTG TCTGCCAAGC chr6:86310604-86310684 45 3.46e-04 GATGAGATAA CTTGGCAA ATTGCCAAGA chr6:118981537-118981617 51 3.46e-04 AGCTGGGGGA GTTGGCAG ATTGCCAGAT chr21:35916382-35916462 21 3.46e-04 agctgcctta cttggcaa cttgccagaa chr12:56544505-56544585 32 3.46e-04 ACCACTCATA CTTGGCAA AATGCCAAAA chr19:3194447-3194527 37 3.79e-04 ataaagtttt attggcac tgggccacat chr2:97197955-97198035 33 3.79e-04 TCTCTAATGA CTTGGCCC GACTCCAGCG chr15:68087312-68087392 22 3.79e-04 GTCAGTGCTC ATTGGCAC CTTGCCAGCC chr13:67798485-67798565 39 3.79e-04 CTACTGCGGG ATTGGCAC CTGGCCAGCA chr1:59249620-59249700 7 4.48e-04 TGCCGA CCTGGCTG GCTGGCTGTG chr5:10601544-10601624 23 4.48e-04 cgaggctcaa cctggctg ggtgccaact chr1:234659480-234659560 37 4.48e-04 GTTTTTACAG GCTGGCAG GCTGCCAGGT chr16:22291467-22291547 43 4.48e-04 CTCTGTATCT CCTGGCAA GGTGCCAAGA chr1:183998460-183998540 10 4.48e-04 aggtcactc gctggcag cttgccaagc chr11:72125370-72125450 46 4.48e-04 CAGCAGGCCT CCTGGCTG GCTGCCAGGA chr3:43746376-43746456 23 5.45e-04 CCTGTCTAAA TTTGGCTG GTTGCCAACA chr1:156093625-156093705 29 5.45e-04 GTGACTCAGG CCTGGCCC CCTGCCAGGC chr2:119560704-119560784 71 5.45e-04 TGACTCATAC CCTGGCCC CT chr12:57030711-57030791 14 5.45e-04 CTACTCCACC CCTGGCCC CGCGCCAAAA chr7:127443767-127443847 45 5.45e-04 GACTCCCAAT TTTGGCAA CCAGCCAAAA chr6:80842846-80842926 38 5.45e-04 GAACATCCCT GTTGGCAT TGTGCCAGCA chr9:90431121-90431201 27 5.45e-04 ccaactgatt tttggcaa agtgccaaga chr1:206629268-206629348 46 5.45e-04 GGCCCTGAAA CCTGGCCC CGTGCCAGCA chr2:202289228-202289308 44 5.80e-04 ggtcagcaaa tttggccc acagccaaat chr7:1577759-1577839 17 5.80e-04 AACCGTGGGG GCTGGCTC GGTCCCAAGG chr9:101267344-101267424 5 5.80e-04 agat tttggccc aatgccaaaa chr1:159851803-159851883 20 5.80e-04 TTCCTGTAGT GCTGGCTC TCTGCCAGCT chr3:45706792-45706872 52 6.46e-04 CAAATGCTTT GCTGGCAT CTTTCCAAGC chr5:158522001-158522081 29 6.46e-04 ACTCATGCTG CCTGGCTT CCTGCCAAAC chr7:12768909-12768989 15 6.46e-04 AGGCTGCAGC TCTGGCTG GGTTCCAGGA chr18:68132106-68132186 20 6.46e-04 AAATTCCGTT GCTGGCAT CGCGCCAAGA chr1:7844153-7844233 56 6.46e-04 gcccccTCGC CCTGGCTT ATATAACCCG chr12:71988169-71988249 21 6.46e-04 tcagtaagag gctggcat gctgccaggg chr12:104781158-10478123 38 6.46e-04 AATTATTTCA TCTGGCTG GGGTTGGACT chr2:3629152-3629232 44 6.79e-04 TTTCCTCAGT TTTGGCTT TGTGCCAGAT chr2:58821453-58821533 44 6.79e-04 AGCTAGTATT TCTGGCCC TGAGCCAGCT chr14:39614699-39614779 36 6.79e-04 AAACATGAAA Tctggccc taagccaaat chr1:9621600-9621680 51 6.79e-04 ATGTAACAGA TTTGGCTT TTTGCCAACT chr19:47816539-47816619 41 7.12e-04 CCAGTCCTAT CTTGGCCG CCTGCCAGCC chr1:46341829-46341909 18 7.12e-04 tatacattac attggcag tgtgccaaga chr6:16006203-16006283 62 7.76e-04 tggattgaat gttggctg actaccaaca chr8:61664348-61664428 26 7.76e-04 AGAACTTGAA GTTGGCAA AATGCCAAGA chr14:31496146-31496226 16 9.44e-04 TCAGTTCTCT GCTGGCAA ATAGCCAAGA chr10:18896617-18896697 39 9.44e-04 catctggagC ATTGGCAT GGGGCCaaga chr14:74239040-74239120 32 9.44e-04 AAATCCAGTT ATTGGCAT TATGCCAATT chr9:123659572-123659652 13 1.01e-03 AGGGACACAG GCTGGCCC AGAGGCAGAT chr15:93425478-93425558 40 1.06e-03 ACCATTCTAG CCTGGCCT AGACCATACC chr10:126236374-12623645 62 1.11e-03 AATCTCAGAT GCTGGCTT GTAACAGTGA chr1:203595841-203595921 20 1.11e-03 AGAGTAATGG TTTGGCCT CGCGCCAAGT chr17:43235952-43236032 1 1.11e-03 . TTTGGCCT CATTATCAGT chr10:22013821-22013901 50 1.11e-03 AGTTAGTAGA GCTGGCTT GCTGCCAAAA chr12:122240760-12224084 24 1.19e-03 GAAAAACCCA CTTGGCCA TTTAATTCCA chr17:58719289-58719369 46 1.19e-03 AAAAAAGGGA ATTGGCTG TCTGCCAGTT chr8:130694423-130694503 57 1.19e-03 TGAAGAACTC ATTGGCAA AAAGCCAAGA chr6:41246840-41246920 16 1.22e-03 agtgtcttag attggccc tgagccaagc chr7:127438243-127438323 42 1.29e-03 TTGTTCTCCT ACTGGCAA GCTGCCAGGG chr4:74606347-74606427 40 1.29e-03 TGACTTCCAA GCTGGCCG TGGCTCTCTT chr5:108804595-108804675 47 1.29e-03 TGTCATGGTC ACTGGCTG CAGCTGTTAC chr3:195766391-195766471 34 1.37e-03 aaaacttgtt tttggccA GGTGCCAAAA chr6:46378237-46378317 34 1.42e-03 TTCTCCACCT TCTGGCCA CAAGGCAAAA chr10:49592797-49592877 18 1.47e-03 GAGTTTCATA GTTGGCCA GGTGCCAAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:223908910-223908990 1.7e-05 13_[+2]_59 chr6:27099774-27099854 1.7e-05 46_[+2]_26 chr11:57019378-57019458 1.7e-05 35_[+2]_37 chr9:37349067-37349147 1.7e-05 40_[+2]_32 chr15:59048321-59048401 1.7e-05 17_[+2]_55 chr2:69690092-69690172 1.7e-05 18_[+2]_54 chr19:49043019-49043099 1.7e-05 48_[+2]_24 chr14:24895068-24895148 1.7e-05 23_[+2]_49 chr3:139037429-139037509 3.4e-05 18_[+2]_54 chr2:62515198-62515278 3.4e-05 29_[+2]_43 chr1:181096382-181096462 3.4e-05 32_[+2]_40 chr19:40715176-40715256 3.4e-05 20_[+2]_52 chr12:121842705-12184278 3.4e-05 18_[+2]_54 chr1:27442893-27442973 3.4e-05 26_[+2]_46 chr22:22329783-22329863 5e-05 46_[+2]_26 chr8:94986363-94986443 5e-05 40_[+2]_32 chr18:28777857-28777937 5e-05 55_[+2]_17 chr3:99587315-99587395 5e-05 45_[+2]_27 chr1:11717870-11717950 5e-05 39_[+2]_33 chr12:66018481-66018561 5e-05 24_[+2]_48 chr6:26280762-26280842 6.6e-05 36_[+2]_36 chr14:35860332-35860412 6.6e-05 33_[+2]_39 chr20:35185041-35185121 6.6e-05 3_[+2]_69 chr17:29152862-29152942 6.6e-05 23_[+2]_49 chr17:37037952-37038032 6.6e-05 16_[+2]_56 chr5:176831285-176831365 6.6e-05 40_[+2]_32 chr11:59609972-59610052 6.6e-05 21_[+2]_51 chr22:30217520-30217600 8.3e-05 39_[+2]_33 chr1:179262709-179262789 8.3e-05 36_[+2]_36 chr14:77506734-77506814 8.3e-05 59_[+2]_13 chr7:106499578-106499658 0.00013 27_[+2]_45 chr5:41747514-41747594 0.00013 20_[+2]_52 chr20:32026413-32026493 0.00013 37_[+2]_35 chr16:1321986-1322066 0.00013 59_[+2]_13 chr1:113168503-113168583 0.00013 20_[+2]_52 chr16:15886611-15886691 0.00013 41_[+2]_31 chr6:147021344-147021424 0.00013 21_[+2]_51 chr2:219187489-219187569 0.00013 33_[+2]_39 chr11:86304092-86304172 0.00013 42_[+2]_30 chr18:43336116-43336196 0.00013 36_[+2]_36 chr6:2770624-2770704 0.00013 22_[+2]_50 chr3:40761566-40761646 0.00013 53_[+2]_19 chr19:10382346-10382426 0.00013 28_[+2]_44 chr17:44820332-44820412 0.00013 13_[+2]_59 chr11:123105928-12310600 0.00013 39_[+2]_33 chr8:61720451-61720531 0.00017 20_[+2]_52 chr7:116764834-116764914 0.00017 47_[+2]_25 chr2:167230610-167230690 0.00017 21_[+2]_51 chr4:175344413-175344493 0.00017 30_[+2]_42 chr11:110350665-11035074 0.00017 44_[+2]_28 chr1:182299493-182299573 0.00017 20_[+2]_52 chr10:89346132-89346212 0.00017 39_[+2]_33 chr7:104524719-104524799 0.00017 40_[+2]_32 chr2:169290794-169290874 0.00017 23_[+2]_49 chr14:75743903-75743983 0.0002 70_[+2]_2 chr10:94517042-94517122 0.0002 31_[+2]_41 chr4:83718286-83718366 0.0002 23_[+2]_49 chr10:72108405-72108485 0.0002 18_[+2]_54 chr1:201885867-201885947 0.0002 29_[+2]_43 chr10:24672654-24672734 0.0002 26_[+2]_46 chr5:145491182-145491262 0.0002 35_[+2]_37 chr9:96215549-96215629 0.0002 39_[+2]_33 chr19:7764401-7764481 0.0002 44_[+2]_28 chr1:224392636-224392716 0.0002 25_[+2]_47 chr11:114030875-11403095 0.0002 10_[+2]_62 chr17:61753471-61753551 0.0002 26_[+2]_46 chr11:66469463-66469543 0.00025 9_[+2]_63 chr7:76026874-76026954 0.00025 20_[+2]_52 chr4:142834154-142834234 0.00025 13_[+2]_59 chr1:166664501-166664581 0.00025 43_[+2]_29 chr5:153603039-153603119 0.00025 42_[+2]_30 chr11:77941650-77941730 0.00025 21_[+2]_51 chr1:114491900-114491980 0.00025 21_[+2]_51 chr5:81032043-81032123 0.00025 67_[+2]_5 chr5:109390100-109390180 0.00026 38_[+2]_34 chr1:113601756-113601836 0.00026 46_[+2]_26 chr2:179349546-179349626 0.00026 32_[+2]_40 chr15:64854353-64854433 0.00026 30_[+2]_42 chr11:16864996-16865076 0.00028 34_[+2]_38 chr10:74124163-74124243 0.00028 5_[+2]_67 chr20:42212707-42212787 0.00035 4_[+2]_68 chr2:58467843-58467923 0.00035 42_[+2]_30 chr6:37208115-37208195 0.00035 49_[+2]_23 chr6:44072995-44073075 0.00035 41_[+2]_31 chr1:224399468-224399548 0.00035 35_[+2]_37 chr2:68815866-68815946 0.00035 28_[+2]_44 chr2:241543918-241543998 0.00035 38_[+2]_34 chr6:86310604-86310684 0.00035 44_[+2]_28 chr6:118981537-118981617 0.00035 50_[+2]_22 chr21:35916382-35916462 0.00035 20_[+2]_52 chr12:56544505-56544585 0.00035 31_[+2]_41 chr19:3194447-3194527 0.00038 36_[+2]_36 chr2:97197955-97198035 0.00038 32_[+2]_40 chr15:68087312-68087392 0.00038 21_[+2]_51 chr13:67798485-67798565 0.00038 38_[+2]_34 chr1:59249620-59249700 0.00045 6_[+2]_66 chr5:10601544-10601624 0.00045 22_[+2]_50 chr1:234659480-234659560 0.00045 36_[+2]_36 chr16:22291467-22291547 0.00045 42_[+2]_30 chr1:183998460-183998540 0.00045 9_[+2]_63 chr11:72125370-72125450 0.00045 45_[+2]_27 chr3:43746376-43746456 0.00055 22_[+2]_50 chr1:156093625-156093705 0.00055 28_[+2]_44 chr2:119560704-119560784 0.00055 70_[+2]_2 chr12:57030711-57030791 0.00055 13_[+2]_59 chr7:127443767-127443847 0.00055 44_[+2]_28 chr6:80842846-80842926 0.00055 37_[+2]_35 chr9:90431121-90431201 0.00055 26_[+2]_46 chr1:206629268-206629348 0.00055 45_[+2]_27 chr2:202289228-202289308 0.00058 43_[+2]_29 chr7:1577759-1577839 0.00058 16_[+2]_56 chr9:101267344-101267424 0.00058 4_[+2]_68 chr1:159851803-159851883 0.00058 19_[+2]_53 chr3:45706792-45706872 0.00065 51_[+2]_21 chr5:158522001-158522081 0.00065 28_[+2]_44 chr7:12768909-12768989 0.00065 14_[+2]_58 chr18:68132106-68132186 0.00065 19_[+2]_53 chr1:7844153-7844233 0.00065 55_[+2]_17 chr12:71988169-71988249 0.00065 20_[+2]_52 chr12:104781158-10478123 0.00065 37_[+2]_35 chr2:3629152-3629232 0.00068 43_[+2]_29 chr2:58821453-58821533 0.00068 43_[+2]_29 chr14:39614699-39614779 0.00068 35_[+2]_37 chr1:9621600-9621680 0.00068 50_[+2]_22 chr19:47816539-47816619 0.00071 40_[+2]_32 chr1:46341829-46341909 0.00071 17_[+2]_55 chr6:16006203-16006283 0.00078 61_[+2]_11 chr8:61664348-61664428 0.00078 25_[+2]_47 chr14:31496146-31496226 0.00094 15_[+2]_57 chr10:18896617-18896697 0.00094 38_[+2]_34 chr14:74239040-74239120 0.00094 31_[+2]_41 chr9:123659572-123659652 0.001 12_[+2]_60 chr15:93425478-93425558 0.0011 39_[+2]_33 chr10:126236374-12623645 0.0011 61_[+2]_11 chr1:203595841-203595921 0.0011 19_[+2]_53 chr17:43235952-43236032 0.0011 [+2]_72 chr10:22013821-22013901 0.0011 49_[+2]_23 chr12:122240760-12224084 0.0012 23_[+2]_49 chr17:58719289-58719369 0.0012 45_[+2]_27 chr8:130694423-130694503 0.0012 56_[+2]_16 chr6:41246840-41246920 0.0012 15_[+2]_57 chr7:127438243-127438323 0.0013 41_[+2]_31 chr4:74606347-74606427 0.0013 39_[+2]_33 chr5:108804595-108804675 0.0013 46_[+2]_26 chr3:195766391-195766471 0.0014 33_[+2]_39 chr6:46378237-46378317 0.0014 33_[+2]_39 chr10:49592797-49592877 0.0015 17_[+2]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YYTGGCAC width=8 seqs=147 chr2:223908910-223908990 ( 14) CTTGGCAC 1 chr6:27099774-27099854 ( 47) CTTGGCAC 1 chr11:57019378-57019458 ( 36) CTTGGCAC 1 chr9:37349067-37349147 ( 41) CTTGGCAC 1 chr15:59048321-59048401 ( 18) CTTGGCAC 1 chr2:69690092-69690172 ( 19) CTTGGCAC 1 chr19:49043019-49043099 ( 49) CTTGGCAC 1 chr14:24895068-24895148 ( 24) CTTGGCAC 1 chr3:139037429-139037509 ( 19) CCTGGCAC 1 chr2:62515198-62515278 ( 30) CCTGGCAC 1 chr1:181096382-181096462 ( 33) CCTGGCAC 1 chr19:40715176-40715256 ( 21) CCTGGCAC 1 chr12:121842705-12184278 ( 19) CCTGGCAC 1 chr1:27442893-27442973 ( 27) CCTGGCAC 1 chr22:22329783-22329863 ( 47) TTTGGCAC 1 chr8:94986363-94986443 ( 41) TTTGGCAC 1 chr18:28777857-28777937 ( 56) TTTGGCAC 1 chr3:99587315-99587395 ( 46) TTTGGCAC 1 chr1:11717870-11717950 ( 40) TTTGGCAC 1 chr12:66018481-66018561 ( 25) TTTGGCAC 1 chr6:26280762-26280842 ( 37) TCTGGCAC 1 chr14:35860332-35860412 ( 34) TCTGGCAC 1 chr20:35185041-35185121 ( 4) TCTGGCAC 1 chr17:29152862-29152942 ( 24) TCTGGCAC 1 chr17:37037952-37038032 ( 17) TCTGGCAC 1 chr5:176831285-176831365 ( 41) TCTGGCAC 1 chr11:59609972-59610052 ( 22) TCTGGCAC 1 chr22:30217520-30217600 ( 40) CTTGGCAG 1 chr1:179262709-179262789 ( 37) CTTGGCAG 1 chr14:77506734-77506814 ( 60) CTTGGCAG 1 chr7:106499578-106499658 ( 28) CTTGGCTC 1 chr5:41747514-41747594 ( 21) GTTGGCAC 1 chr20:32026413-32026493 ( 38) CTTGGCTC 1 chr16:1321986-1322066 ( 60) GTTGGCAC 1 chr1:113168503-113168583 ( 21) CTTGGCTC 1 chr16:15886611-15886691 ( 42) CTTGGCTC 1 chr6:147021344-147021424 ( 22) CTTGGCTC 1 chr2:219187489-219187569 ( 34) CCTGGCAG 1 chr11:86304092-86304172 ( 43) CTTGGCTC 1 chr18:43336116-43336196 ( 37) GTTGGCAC 1 chr6:2770624-2770704 ( 23) CCTGGCAG 1 chr3:40761566-40761646 ( 54) CTTGGCTC 1 chr19:10382346-10382426 ( 29) CTTGGCTC 1 chr17:44820332-44820412 ( 14) CTTGGCTC 1 chr11:123105928-12310600 ( 40) CCTGGCAG 1 chr8:61720451-61720531 ( 21) TTTGGCAG 1 chr7:116764834-116764914 ( 48) TTTGGCAG 1 chr2:167230610-167230690 ( 22) TTTGGCAG 1 chr4:175344413-175344493 ( 31) TTTGGCAG 1 chr11:110350665-11035074 ( 45) CTTGGCAT 1 chr1:182299493-182299573 ( 21) CTTGGCAT 1 chr10:89346132-89346212 ( 40) TTTGGCAG 1 chr7:104524719-104524799 ( 41) TTTGGCAG 1 chr2:169290794-169290874 ( 24) CTTGGCAT 1 chr14:75743903-75743983 ( 71) CCTGGCTC 1 chr10:94517042-94517122 ( 32) CCTGGCTC 1 chr4:83718286-83718366 ( 24) GCTGGCAC 1 chr10:72108405-72108485 ( 19) CCTGGCTC 1 chr1:201885867-201885947 ( 30) CCTGGCTC 1 chr10:24672654-24672734 ( 27) GCTGGCAC 1 chr5:145491182-145491262 ( 36) GCTGGCAC 1 chr9:96215549-96215629 ( 40) GCTGGCAC 1 chr19:7764401-7764481 ( 45) CCTGGCTC 1 chr1:224392636-224392716 ( 26) CCTGGCTC 1 chr11:114030875-11403095 ( 11) CCTGGCTC 1 chr17:61753471-61753551 ( 27) GCTGGCAC 1 chr11:66469463-66469543 ( 10) CCTGGCAT 1 chr7:76026874-76026954 ( 21) TCTGGCAG 1 chr4:142834154-142834234 ( 14) CCTGGCAT 1 chr1:166664501-166664581 ( 44) TCTGGCAG 1 chr5:153603039-153603119 ( 43) TTTGGCTC 1 chr11:77941650-77941730 ( 22) CCTGGCAT 1 chr1:114491900-114491980 ( 22) TTTGGCTC 1 chr5:81032043-81032123 ( 68) TCTGGCAG 1 chr5:109390100-109390180 ( 39) TTTGGCAT 1 chr1:113601756-113601836 ( 47) TTTGGCAT 1 chr2:179349546-179349626 ( 33) TTTGGCAT 1 chr15:64854353-64854433 ( 31) TTTGGCAT 1 chr11:16864996-16865076 ( 35) TCTGGCTC 1 chr10:74124163-74124243 ( 6) TCTGGCTC 1 chr20:42212707-42212787 ( 5) GTTGGCAG 1 chr2:58467843-58467923 ( 43) CTTGGCAA 1 chr6:37208115-37208195 ( 50) CTTGGCTG 1 chr6:44072995-44073075 ( 42) GTTGGCAG 1 chr1:224399468-224399548 ( 36) GTTGGCAG 1 chr2:68815866-68815946 ( 29) TCTGGCAT 1 chr2:241543918-241543998 ( 39) CTTGGCTG 1 chr6:86310604-86310684 ( 45) CTTGGCAA 1 chr6:118981537-118981617 ( 51) GTTGGCAG 1 chr21:35916382-35916462 ( 21) CTTGGCAA 1 chr12:56544505-56544585 ( 32) CTTGGCAA 1 chr19:3194447-3194527 ( 37) ATTGGCAC 1 chr2:97197955-97198035 ( 33) CTTGGCCC 1 chr15:68087312-68087392 ( 22) ATTGGCAC 1 chr13:67798485-67798565 ( 39) ATTGGCAC 1 chr1:59249620-59249700 ( 7) CCTGGCTG 1 chr5:10601544-10601624 ( 23) CCTGGCTG 1 chr1:234659480-234659560 ( 37) GCTGGCAG 1 chr16:22291467-22291547 ( 43) CCTGGCAA 1 chr1:183998460-183998540 ( 10) GCTGGCAG 1 chr11:72125370-72125450 ( 46) CCTGGCTG 1 chr3:43746376-43746456 ( 23) TTTGGCTG 1 chr1:156093625-156093705 ( 29) CCTGGCCC 1 chr2:119560704-119560784 ( 71) CCTGGCCC 1 chr12:57030711-57030791 ( 14) CCTGGCCC 1 chr7:127443767-127443847 ( 45) TTTGGCAA 1 chr6:80842846-80842926 ( 38) GTTGGCAT 1 chr9:90431121-90431201 ( 27) TTTGGCAA 1 chr1:206629268-206629348 ( 46) CCTGGCCC 1 chr2:202289228-202289308 ( 44) TTTGGCCC 1 chr7:1577759-1577839 ( 17) GCTGGCTC 1 chr9:101267344-101267424 ( 5) TTTGGCCC 1 chr1:159851803-159851883 ( 20) GCTGGCTC 1 chr3:45706792-45706872 ( 52) GCTGGCAT 1 chr5:158522001-158522081 ( 29) CCTGGCTT 1 chr7:12768909-12768989 ( 15) TCTGGCTG 1 chr18:68132106-68132186 ( 20) GCTGGCAT 1 chr1:7844153-7844233 ( 56) CCTGGCTT 1 chr12:71988169-71988249 ( 21) GCTGGCAT 1 chr12:104781158-10478123 ( 38) TCTGGCTG 1 chr2:3629152-3629232 ( 44) TTTGGCTT 1 chr2:58821453-58821533 ( 44) TCTGGCCC 1 chr14:39614699-39614779 ( 36) TCTGGCCC 1 chr1:9621600-9621680 ( 51) TTTGGCTT 1 chr19:47816539-47816619 ( 41) CTTGGCCG 1 chr1:46341829-46341909 ( 18) ATTGGCAG 1 chr6:16006203-16006283 ( 62) GTTGGCTG 1 chr8:61664348-61664428 ( 26) GTTGGCAA 1 chr14:31496146-31496226 ( 16) GCTGGCAA 1 chr10:18896617-18896697 ( 39) ATTGGCAT 1 chr14:74239040-74239120 ( 32) ATTGGCAT 1 chr9:123659572-123659652 ( 13) GCTGGCCC 1 chr15:93425478-93425558 ( 40) CCTGGCCT 1 chr10:126236374-12623645 ( 62) GCTGGCTT 1 chr1:203595841-203595921 ( 20) TTTGGCCT 1 chr17:43235952-43236032 ( 1) TTTGGCCT 1 chr10:22013821-22013901 ( 50) GCTGGCTT 1 chr12:122240760-12224084 ( 24) CTTGGCCA 1 chr17:58719289-58719369 ( 46) ATTGGCTG 1 chr8:130694423-130694503 ( 57) ATTGGCAA 1 chr6:41246840-41246920 ( 16) ATTGGCCC 1 chr7:127438243-127438323 ( 42) ACTGGCAA 1 chr4:74606347-74606427 ( 40) GCTGGCCG 1 chr5:108804595-108804675 ( 47) ACTGGCTG 1 chr3:195766391-195766471 ( 34) TTTGGCCA 1 chr6:46378237-46378317 ( 34) TCTGGCCA 1 chr10:49592797-49592877 ( 18) GTTGGCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.81652 E= 3.0e-073 -168 71 -44 36 -1384 82 -1384 115 -1384 -1384 -1384 203 -1384 -1384 196 -1384 -1384 -1384 196 -1384 -1384 195 -1384 -1384 132 -93 -1384 12 -123 90 -11 -47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 147 E= 3.0e-073 0.074830 0.421769 0.190476 0.312925 0.000000 0.455782 0.000000 0.544218 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.598639 0.136054 0.000000 0.265306 0.102041 0.482993 0.238095 0.176871 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YYTGGCAC MEME-2 regular expression -------------------------------------------------------------------------------- [CT][TC]TGGC[AT][CG] -------------------------------------------------------------------------------- Time 8.44 secs. ******************************************************************************** ******************************************************************************** MOTIF TTAYRTAA MEME-3 width = 8 sites = 12 llr = 119 E-value = 2.8e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a:3:aa pos.-specific C :::5:::: probability G ::::7::: matrix T aa:5:a:: bits 2.1 *** *** 1.9 *** *** 1.7 *** *** 1.4 *** *** Relative 1.2 *** *** Entropy 1.0 ******** (14.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTACGTAA consensus TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:65290041-65290121 58 1.27e-05 GTACATTGTG TTATGTAA TGAATGCTGT chr1:61719210-61719290 24 1.27e-05 ATGGGGACTG TTATGTAA TCAGAGGTCA chr1:7844153-7844233 21 1.27e-05 AGCCCGCGCG TTATGTAA cgcgccccgg chr17:30810624-30810704 21 1.27e-05 TGTGTGCTAG TTATGTAA TCTGTGCTGC chr1:9621600-9621680 39 1.27e-05 GAAGTTTGGA TTATGTAA CAGATTTGGC chr1:160070969-160071049 24 1.27e-05 CCTCAGCTGC TTATGTAA CTGGGAAAGC chr6:157738322-157738402 44 2.61e-05 agtcctcatc ttacgtaa cttatcacca chr12:122884545-12288462 37 2.61e-05 GAAGTCACGG TTACGTAA GTATGCTGTG chr19:2236424-2236504 52 5.03e-05 CGGACCGTTG TTACATAA CCATTAAACT chr19:46389407-46389487 18 5.03e-05 GCAGGGAAAG TTACATAA CACGCCTGCA chr3:169684495-169684575 26 5.03e-05 AGCCGGCGGA TTACATAA CGGGCCTCGG chr2:119560704-119560784 2 5.03e-05 G TTACATAA CGAGTTGTTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:65290041-65290121 1.3e-05 57_[+3]_15 chr1:61719210-61719290 1.3e-05 23_[+3]_49 chr1:7844153-7844233 1.3e-05 20_[+3]_52 chr17:30810624-30810704 1.3e-05 20_[+3]_52 chr1:9621600-9621680 1.3e-05 38_[+3]_34 chr1:160070969-160071049 1.3e-05 23_[+3]_49 chr6:157738322-157738402 2.6e-05 43_[+3]_29 chr12:122884545-12288462 2.6e-05 36_[+3]_36 chr19:2236424-2236504 5e-05 51_[+3]_21 chr19:46389407-46389487 5e-05 17_[+3]_55 chr3:169684495-169684575 5e-05 25_[+3]_47 chr2:119560704-119560784 5e-05 1_[+3]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTAYRTAA width=8 seqs=12 chr1:65290041-65290121 ( 58) TTATGTAA 1 chr1:61719210-61719290 ( 24) TTATGTAA 1 chr1:7844153-7844233 ( 21) TTATGTAA 1 chr17:30810624-30810704 ( 21) TTATGTAA 1 chr1:9621600-9621680 ( 39) TTATGTAA 1 chr1:160070969-160071049 ( 24) TTATGTAA 1 chr6:157738322-157738402 ( 44) TTACGTAA 1 chr12:122884545-12288462 ( 37) TTACGTAA 1 chr19:2236424-2236504 ( 52) TTACATAA 1 chr19:46389407-46389487 ( 18) TTACATAA 1 chr3:169684495-169684575 ( 26) TTACATAA 1 chr2:119560704-119560784 ( 2) TTACATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2284 E= 2.8e+003 -1023 -1023 -1023 203 -1023 -1023 -1023 203 206 -1023 -1023 -1023 -1023 95 -1023 103 48 -1023 137 -1023 -1023 -1023 -1023 203 206 -1023 -1023 -1023 206 -1023 -1023 -1023 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 2.8e+003 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.333333 0.000000 0.666667 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTAYRTAA MEME-3 regular expression -------------------------------------------------------------------------------- TTA[CT][GA]TAA -------------------------------------------------------------------------------- Time 11.69 secs. ******************************************************************************** ******************************************************************************** MOTIF WCAGTGAG MEME-4 width = 8 sites = 10 llr = 101 E-value = 3.2e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 4:a:::9: pos.-specific C :a:::::: probability G :::a:a:a matrix T 6:::a:1: bits 2.1 * * 1.9 ***** * 1.7 ******* 1.4 ******* Relative 1.2 ******* Entropy 1.0 ******** (14.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCAGTGAG consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:120107395-12010747 70 1.53e-05 ACTGAAATGA TCAGTGAG CAA chr18:28777857-28777937 6 1.53e-05 ATTTT TCAGTGAG ATGTCACTCC chr1:224399468-224399548 23 1.53e-05 ATTCATTTGC TCAGTGAG TCAAGGTTGG chr1:113601756-113601836 8 1.53e-05 AGGATAA TCAGTGAG AACTTCATTA chr6:2770624-2770704 52 1.53e-05 GGGCCGGGCG TCAGTGAG GAGAGGGTGG chr21:46493753-46493833 63 3.01e-05 CCCGGAGTCT ACAGTGAG GATGACGGGC chr10:126236374-12623645 73 3.01e-05 CTGGCTTGTA ACAGTGAG chr1:113168503-113168583 65 3.01e-05 GGAGGCAAAG ACAGTGAG CATTTCCA chr11:114030875-11403095 63 3.01e-05 TACAGTATGT ACAGTGAG TGCTGAGCCA chr5:109390100-109390180 60 4.58e-05 GCCAACAGCC TCAGTGTG CTGTGCTTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:120107395-12010747 1.5e-05 69_[+4]_3 chr18:28777857-28777937 1.5e-05 5_[+4]_67 chr1:224399468-224399548 1.5e-05 22_[+4]_50 chr1:113601756-113601836 1.5e-05 7_[+4]_65 chr6:2770624-2770704 1.5e-05 51_[+4]_21 chr21:46493753-46493833 3e-05 62_[+4]_10 chr10:126236374-12623645 3e-05 72_[+4] chr1:113168503-113168583 3e-05 64_[+4]_8 chr11:114030875-11403095 3e-05 62_[+4]_10 chr5:109390100-109390180 4.6e-05 59_[+4]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WCAGTGAG width=8 seqs=10 chr11:120107395-12010747 ( 70) TCAGTGAG 1 chr18:28777857-28777937 ( 6) TCAGTGAG 1 chr1:224399468-224399548 ( 23) TCAGTGAG 1 chr1:113601756-113601836 ( 8) TCAGTGAG 1 chr6:2770624-2770704 ( 52) TCAGTGAG 1 chr21:46493753-46493833 ( 63) ACAGTGAG 1 chr10:126236374-12623645 ( 73) ACAGTGAG 1 chr1:113168503-113168583 ( 65) ACAGTGAG 1 chr11:114030875-11403095 ( 63) ACAGTGAG 1 chr5:109390100-109390180 ( 60) TCAGTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2669 E= 3.2e+004 74 -997 -997 129 -997 195 -997 -997 206 -997 -997 -997 -997 -997 196 -997 -997 -997 -997 203 -997 -997 196 -997 191 -997 -997 -129 -997 -997 196 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 3.2e+004 0.400000 0.000000 0.000000 0.600000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.900000 0.000000 0.000000 0.100000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WCAGTGAG MEME-4 regular expression -------------------------------------------------------------------------------- [TA]CAGTGAG -------------------------------------------------------------------------------- Time 14.92 secs. ******************************************************************************** ******************************************************************************** MOTIF GGAAAAAA MEME-5 width = 8 sites = 2 llr = 23 E-value = 1.3e+005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::aaaaaa pos.-specific C :::::::: probability G aa:::::: matrix T :::::::: bits 2.1 ****** 1.9 ******** 1.7 ******** 1.4 ******** Relative 1.2 ******** Entropy 1.0 ******** (16.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGAAAAAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:46143393-46143473 58 1.24e-05 CATTGCCTAG GGAAAAAA CCCGGATGTA chr17:58719289-58719369 34 1.24e-05 cctctactga GGAAAAAA GGGAATTGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:46143393-46143473 1.2e-05 57_[+5]_15 chr17:58719289-58719369 1.2e-05 33_[+5]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGAAAAAA width=8 seqs=2 chr11:46143393-46143473 ( 58) GGAAAAAA 1 chr17:58719289-58719369 ( 34) GGAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.3e+005 -765 -765 195 -765 -765 -765 195 -765 206 -765 -765 -765 206 -765 -765 -765 206 -765 -765 -765 206 -765 -765 -765 206 -765 -765 -765 206 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.3e+005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAAAAA MEME-5 regular expression -------------------------------------------------------------------------------- GGAAAAAA -------------------------------------------------------------------------------- Time 18.13 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:56544505-56544585 5.09e-04 41_[+1(7.67e-05)]_13_[+5(8.39e-05)]_\ 10 chr11:123105928-12310600 6.04e-03 49_[+1(4.64e-05)]_23 chr11:59609972-59610052 2.85e-03 21_[+2(6.64e-05)]_2_[+1(1.49e-05)]_\ 41 chr14:24895068-24895148 5.37e-03 23_[+2(1.66e-05)]_49 chr1:27442893-27442973 3.52e-05 26_[+2(3.41e-05)]_36_[+5(1.24e-05)]_\ 2 chr12:66018481-66018561 4.84e-04 24_[+2(4.98e-05)]_2_[+1(4.64e-05)]_\ 38 chr5:81032043-81032123 9.79e-03 45_[+1(7.67e-05)]_27 chr17:44820332-44820412 9.43e-02 80 chr21:35916382-35916462 6.88e-02 80 chr6:118981537-118981617 9.66e-03 80 chr2:169290794-169290874 4.60e-02 80 chr12:104781158-10478123 1.13e-02 80 chr1:206629268-206629348 1.11e-01 80 chr11:72125370-72125450 4.36e-02 55_[+1(4.64e-05)]_17 chr5:108804595-108804675 2.59e-02 17_[+2(8.29e-05)]_55 chr17:61753471-61753551 6.78e-03 71_[+4(6.10e-05)]_1 chr19:49043019-49043099 2.92e-03 48_[+2(1.66e-05)]_24 chr1:11717870-11717950 2.19e-03 39_[+2(4.98e-05)]_2_[+1(7.67e-05)]_\ 23 chr15:63729148-63729228 1.63e-01 80 chr7:104524719-104524799 3.45e-02 80 chr8:61664348-61664428 6.41e-04 35_[+1(1.49e-05)]_37 chr2:69690092-69690172 1.64e-03 18_[+2(1.66e-05)]_54 chr8:130694423-130694503 1.80e-02 80 chr9:90431121-90431201 4.87e-03 36_[+1(1.49e-05)]_36 chr1:160070969-160071049 1.00e-02 23_[+3(1.27e-05)]_49 chr1:183998460-183998540 7.68e-02 80 chr1:9621600-9621680 1.05e-03 38_[+3(1.27e-05)]_34 chr9:130769938-130770018 2.82e-02 80 chr10:22013821-22013901 1.46e-03 59_[+1(7.67e-05)]_13 chr12:121842705-12184278 2.12e-03 18_[+2(3.41e-05)]_54 chr8:29999281-29999361 2.61e-02 46_[+1(4.64e-05)]_26 chr1:114491900-114491980 6.58e-02 80 chr15:59048321-59048401 3.28e-04 17_[+2(1.66e-05)]_2_[+1(7.67e-05)]_\ 45 chr19:10382346-10382426 6.10e-02 80 chr10:89346132-89346212 9.96e-03 80 chr6:86310604-86310684 2.51e-04 54_[+1(1.49e-05)]_18 chr17:43235952-43236032 1.60e-01 80 chr11:114030875-11403095 1.59e-03 62_[+4(3.01e-05)]_10 chr5:159546894-159546974 6.02e-01 80 chr10:49592797-49592877 3.97e-02 27_[+1(4.64e-05)]_45 chr7:75932796-75932876 1.88e-01 80 chr1:159851803-159851883 2.15e-02 80 chr6:80842846-80842926 6.04e-02 80 chr14:74239040-74239120 1.18e-01 80 chr7:2064084-2064164 2.39e-01 80 chr1:224392636-224392716 3.60e-01 80 chr4:74606347-74606427 4.81e-03 54_[+2(8.29e-05)]_18 chr18:9575664-9575744 3.79e-02 80 chr13:67798485-67798565 2.49e-01 80 chr1:182299493-182299573 2.18e-02 80 chr19:40715176-40715256 1.07e-02 20_[+2(3.41e-05)]_52 chr9:37349067-37349147 1.17e-03 40_[+2(1.66e-05)]_32 chr15:64854353-64854433 3.82e-04 40_[+1(1.49e-05)]_32 chr1:46341829-46341909 1.98e-03 27_[+1(1.49e-05)]_45 chr6:16006203-16006283 6.49e-02 80 chr2:179349546-179349626 2.88e-02 80 chr8:145129330-145129410 4.58e-02 80 chr9:101267344-101267424 6.85e-04 14_[+1(7.67e-05)]_58 chr11:65191876-65191956 9.08e-01 80 chr11:57019378-57019458 6.34e-02 35_[+2(1.66e-05)]_37 chr1:181096382-181096462 5.73e-03 32_[+2(3.41e-05)]_40 chr2:26214617-26214697 3.08e-01 80 chr17:30810624-30810704 1.63e-02 20_[+3(1.27e-05)]_52 chr16:22291467-22291547 2.29e-02 52_[+1(1.49e-05)]_20 chr3:40761566-40761646 2.65e-01 80 chr7:127443767-127443847 7.41e-03 71_[+5(8.39e-05)]_1 chr10:74124163-74124243 2.46e-02 80 chr6:2770624-2770704 1.20e-03 51_[+4(1.53e-05)]_21 chr14:39614699-39614779 3.36e-03 80 chr2:241543918-241543998 3.10e-02 80 chr11:110350665-11035074 2.59e-04 54_[+1(1.49e-05)]_18 chr2:68815866-68815946 1.27e-02 38_[+1(4.64e-05)]_34 chr1:113601756-113601836 1.08e-04 7_[+4(1.53e-05)]_65 chr12:57030711-57030791 2.22e-01 80 chr19:7764401-7764481 2.12e-03 54_[+1(4.64e-05)]_18 chr3:99587315-99587395 1.06e-02 45_[+2(4.98e-05)]_27 chr22:41763247-41763327 1.97e-01 80 chr17:58719289-58719369 3.24e-03 33_[+5(1.24e-05)]_39 chr1:234659480-234659560 4.95e-04 46_[+1(6.29e-05)]_26 chr20:362440-362520 7.01e-01 80 chr18:3603751-3603831 5.33e-01 80 chr1:203595841-203595921 5.73e-01 80 chr12:71988169-71988249 4.61e-04 80 chr11:16864996-16865076 6.06e-03 80 chr1:7844153-7844233 2.40e-02 20_[+3(1.27e-05)]_33_[+3(3.79e-05)]_\ 11 chr19:58111170-58111250 1.16e-01 80 chr11:65194224-65194304 4.18e-01 80 chr6:30843430-30843510 9.40e-01 80 chr9:96215549-96215629 1.60e-01 80 chr15:68087312-68087392 3.21e-02 80 chr17:56408895-56408975 9.43e-01 80 chr5:10601544-10601624 6.72e-02 80 chr15:93426047-93426127 7.39e-01 80 chr5:37413279-37413359 1.58e-01 80 chr5:158769001-158769081 6.86e-02 80 chr1:61719210-61719290 1.40e-03 23_[+3(1.27e-05)]_49 chr11:59314569-59314649 2.62e-01 80 chr18:43336116-43336196 1.94e-03 46_[+1(4.64e-05)]_26 chr18:68132106-68132186 1.38e-01 80 chr10:103305792-10330587 3.95e-03 80 chr5:137805110-137805190 5.25e-01 80 chr11:86304092-86304172 1.35e-03 52_[+1(4.64e-05)]_20 chr2:119560704-119560784 6.40e-03 1_[+3(5.03e-05)]_71 chr5:145491182-145491262 5.48e-02 80 chr5:76464869-76464949 1.53e-01 80 chr2:58821453-58821533 2.03e-01 80 chr1:224399468-224399548 1.20e-03 22_[+4(1.53e-05)]_50 chr14:102176487-10217656 3.57e-01 80 chrX:2171188-2171268 1.51e-02 26_[+4(9.32e-05)]_46 chr3:169684495-169684575 1.78e-01 25_[+3(5.03e-05)]_47 chr17:74410802-74410882 4.99e-02 80 chr12:122884545-12288462 1.15e-01 36_[+3(2.61e-05)]_36 chr5:131628968-131629048 1.09e-02 80 chr12:1715285-1715365 1.40e-01 80 chr6:44072995-44073075 6.59e-03 51_[+1(1.49e-05)]_21 chr10:18896617-18896697 7.05e-02 80 chr6:41246840-41246920 2.07e-01 80 chr19:46389407-46389487 6.48e-02 17_[+3(5.03e-05)]_55 chr12:9913353-9913433 4.59e-01 80 chr2:72998170-72998250 8.29e-01 80 chr11:77941650-77941730 1.07e-02 80 chr6:37208115-37208195 1.11e-01 80 chr17:56468993-56469073 5.16e-02 80 chr1:156093625-156093705 1.08e-01 80 chr5:153603039-153603119 2.62e-02 80 chr6:27099774-27099854 5.30e-02 46_[+2(1.66e-05)]_26 chr1:14769765-14769845 6.20e-02 80 chr5:176831285-176831365 1.01e-02 40_[+2(6.64e-05)]_2_[+1(6.29e-05)]_\ 22 chr2:219187489-219187569 4.09e-03 43_[+1(4.64e-05)]_29 chr2:62515198-62515278 1.55e-02 29_[+2(3.41e-05)]_43 chr22:50978204-50978284 2.13e-01 80 chr11:62648363-62648443 9.28e-01 80 chr16:23913956-23914036 8.89e-01 80 chr10:24672654-24672734 3.85e-02 80 chr1:201885867-201885947 2.28e-01 80 chr6:147021344-147021424 2.03e-01 80 chr18:28777857-28777937 1.79e-04 5_[+4(1.53e-05)]_42_[+2(4.98e-05)]_\ 17 chr1:151763157-151763237 1.53e-01 80 chr9:101836665-101836745 9.79e-01 80 chr1:166664501-166664581 7.39e-03 53_[+1(4.64e-05)]_19 chr16:15886611-15886691 9.43e-03 80 chr10:119171093-11917117 4.82e-02 80 chr1:113168503-113168583 1.88e-03 64_[+4(3.01e-05)]_8 chr6:157738322-157738402 1.06e-03 43_[+3(2.61e-05)]_29 chr17:41393285-41393365 5.21e-01 80 chr7:12768909-12768989 1.06e-01 80 chr8:101734258-101734338 9.85e-01 80 chr12:120667130-12066721 2.51e-02 47_[+1(1.49e-05)]_25 chr10:72108405-72108485 5.91e-02 80 chr11:65269509-65269589 4.34e-01 80 chr1:156586391-156586471 2.70e-02 80 chr2:3629152-3629232 3.28e-02 80 chr4:142834154-142834234 2.70e-02 80 chr4:10118747-10118827 8.91e-01 80 chr6:89791377-89791457 4.43e-01 80 chr17:37037952-37038032 1.38e-03 16_[+2(6.64e-05)]_22_[+4(9.32e-05)]_\ 26 chr7:32977401-32977481 1.32e-02 33_[+1(4.64e-05)]_39 chr12:109034964-10903504 2.89e-02 80 chr11:46143393-46143473 1.55e-02 57_[+5(1.24e-05)]_15 chr2:58467843-58467923 2.69e-02 80 chr19:47816539-47816619 6.85e-02 80 chr14:77506734-77506814 1.86e-02 59_[+2(8.29e-05)]_13 chr4:83718286-83718366 9.14e-04 33_[+1(7.67e-05)]_39 chr10:126236374-12623645 1.21e-02 72_[+4(3.01e-05)] chr17:56743903-56743983 9.33e-01 80 chr12:122240760-12224084 8.02e-02 80 chr16:1321986-1322066 5.76e-02 80 chr5:137801303-137801383 1.50e-01 80 chr4:175344413-175344493 1.96e-03 80 chr5:95064965-95065045 4.47e-02 80 chr17:29152862-29152942 1.21e-02 23_[+2(6.64e-05)]_49 chrX:2171431-2171511 1.28e-01 80 chr15:67316845-67316925 2.74e-03 80 chr1:65290041-65290121 8.61e-05 38_[+1(7.67e-05)]_11_[+3(1.27e-05)]_\ 15 chr16:50357491-50357571 3.26e-01 80 chr7:1577759-1577839 1.89e-01 80 chr2:202289228-202289308 1.33e-01 80 chr8:94986363-94986443 4.43e-03 40_[+2(4.98e-05)]_32 chr5:158522001-158522081 2.30e-02 80 chr7:76026874-76026954 6.68e-02 80 chr3:185255434-185255514 2.30e-01 80 chr20:42212707-42212787 1.19e-01 80 chr1:179262709-179262789 2.93e-02 36_[+2(8.29e-05)]_36 chr20:61408116-61408196 8.23e-01 80 chrX:65235334-65235414 8.81e-01 80 chr14:31496146-31496226 2.18e-02 80 chr11:66469463-66469543 2.01e-01 80 chr2:145116807-145116887 4.17e-01 80 chr2:223908910-223908990 6.62e-03 13_[+2(1.66e-05)]_59 chr22:22020341-22020421 5.24e-01 80 chr22:30217520-30217600 3.50e-04 39_[+2(8.29e-05)]_2_[+1(6.29e-05)]_\ 23 chr19:2236424-2236504 4.16e-02 51_[+3(5.03e-05)]_21 chr1:59249620-59249700 4.81e-01 80 chr10:94517042-94517122 1.94e-02 80 chr3:139037429-139037509 7.08e-04 18_[+2(3.41e-05)]_54 chr5:137803680-137803760 8.58e-01 80 chr22:22329783-22329863 1.05e-03 46_[+2(4.98e-05)]_2_[+1(4.64e-05)]_\ 16 chr5:137514223-137514303 8.46e-01 80 chr3:45706792-45706872 4.38e-01 80 chr19:48835985-48836065 9.64e-02 30_[+1(4.64e-05)]_42 chr20:35185041-35185121 1.13e-01 3_[+2(6.64e-05)]_69 chr8:102064013-102064093 1.64e-02 19_[+1(7.67e-05)]_53 chr16:15670622-15670702 3.77e-01 80 chrX:134124920-134125000 4.94e-02 80 chr22:21356491-21356571 7.63e-01 80 chr7:127438243-127438323 8.63e-02 80 chr14:35860332-35860412 3.50e-02 33_[+2(6.64e-05)]_39 chr1:147735862-147735942 7.44e-01 80 chr20:32026413-32026493 1.50e-02 80 chr2:167230610-167230690 1.05e-02 80 chr5:60704503-60704583 6.70e-03 80 chr9:128003522-128003602 6.56e-01 80 chr1:15106962-15107042 2.61e-02 80 chr6:46378237-46378317 6.67e-02 80 chr7:116764834-116764914 1.47e-02 80 chr21:46493753-46493833 2.83e-02 62_[+4(3.01e-05)]_10 chr6:26280762-26280842 3.30e-02 36_[+2(6.64e-05)]_36 chr3:43746376-43746456 1.83e-03 80 chr19:49956903-49956983 9.97e-01 80 chr17:62502319-62502399 9.56e-01 80 chr15:93425478-93425558 5.92e-01 80 chr6:28303484-28303564 1.47e-01 80 chr11:65270525-65270605 4.29e-01 80 chr5:41747514-41747594 2.08e-05 30_[+1(4.64e-05)]_42 chr17:57915297-57915377 6.74e-01 80 chr1:210547476-210547556 4.33e-02 80 chr2:97197955-97198035 5.58e-01 80 chr8:61720451-61720531 8.79e-03 80 chr3:195766391-195766471 5.11e-03 43_[+1(7.67e-05)]_29 chr14:75743903-75743983 2.34e-01 80 chrX:135962793-135962873 7.84e-01 80 chr7:152011365-152011445 9.46e-02 80 chr1:68150903-68150983 8.25e-01 80 chr6:31704214-31704294 9.92e-01 80 chr5:109390100-109390180 3.68e-04 59_[+4(4.58e-05)]_13 chr7:129063720-129063800 4.14e-02 80 chr11:120107395-12010747 1.82e-02 69_[+4(1.53e-05)]_3 chr9:123659572-123659652 8.20e-02 80 chr17:17739713-17739793 7.03e-01 80 chr19:5718875-5718955 8.65e-01 80 chr7:106499578-106499658 1.04e-01 80 chr19:3194447-3194527 9.80e-02 80 chrX:41193436-41193516 1.89e-01 80 chr13:111365623-11136570 9.82e-01 80 chr5:90679070-90679150 3.27e-01 80 chr8:125827824-125827904 1.39e-01 80 chr12:46766461-46766541 9.14e-01 80 chr11:59313062-59313142 1.61e-01 80 chr10:23344522-23344602 6.25e-02 80 chr11:64008287-64008367 9.86e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************