******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/SIX5.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:49310026-49310106 1.0000 80 chr19:49362011-49362091 1.0000 80 chr19:49416528-49416608 1.0000 80 chr19:55831280-55831360 1.0000 80 chr19:49486854-49486934 1.0000 80 chr19:54682365-54682445 1.0000 80 chr19:48922673-48922753 1.0000 80 chr1:154979441-154979521 1.0000 80 chr19:55709049-55709129 1.0000 80 chr19:54480863-54480943 1.0000 80 chr19:54411496-54411576 1.0000 80 chr19:55816992-55817072 1.0000 80 chr11:46134684-46134764 1.0000 80 chr17:7094940-7095020 1.0000 80 chr19:49013936-49014016 1.0000 80 chr19:55815809-55815889 1.0000 80 chr19:49385137-49385217 1.0000 80 chr17:40559668-40559748 1.0000 80 chr19:54396426-54396506 1.0000 80 chr2:220150936-220151016 1.0000 80 chr19:49248612-49248692 1.0000 80 chr19:49228256-49228336 1.0000 80 chr19:51142563-51142643 1.0000 80 chr19:49404473-49404553 1.0000 80 chr19:48907010-48907090 1.0000 80 chr19:50651539-50651619 1.0000 80 chr1:10706560-10706640 1.0000 80 chr19:55690510-55690590 1.0000 80 chr19:507893-507973 1.0000 80 chr7:20257099-20257179 1.0000 80 chr6:31866308-31866388 1.0000 80 chr7:1465366-1465446 1.0000 80 chr19:54382692-54382772 1.0000 80 chr19:49148180-49148260 1.0000 80 chr8:82755020-82755100 1.0000 80 chr6:10147338-10147418 1.0000 80 chr17:7358812-7358892 1.0000 80 chr15:63481580-63481660 1.0000 80 chr19:46027160-46027240 1.0000 80 chr11:919198-919278 1.0000 80 chr19:49017221-49017301 1.0000 80 chr1:243418776-243418856 1.0000 80 chr17:7118414-7118494 1.0000 80 chr19:49479589-49479669 1.0000 80 chr19:49422139-49422219 1.0000 80 chr19:7616357-7616437 1.0000 80 chr16:33569512-33569592 1.0000 80 chr16:68482588-68482668 1.0000 80 chr1:22755262-22755342 1.0000 80 chr19:51963844-51963924 1.0000 80 chr12:104323504-10432358 1.0000 80 chr14:24701754-24701834 1.0000 80 chr19:49224354-49224434 1.0000 80 chr19:50163163-50163243 1.0000 80 chr17:19912578-19912658 1.0000 80 chr19:55677437-55677517 1.0000 80 chr20:49084694-49084774 1.0000 80 chrX:47050071-47050151 1.0000 80 chr16:58664412-58664492 1.0000 80 chr4:79575005-79575085 1.0000 80 chr14:82000454-82000534 1.0000 80 chr9:72435530-72435610 1.0000 80 chr16:30908459-30908539 1.0000 80 chr20:750599-750679 1.0000 80 chr1:47799901-47799981 1.0000 80 chr2:27319257-27319337 1.0000 80 chr5:131526030-131526110 1.0000 80 chr19:49250485-49250565 1.0000 80 chr15:79165113-79165193 1.0000 80 chr19:50836831-50836911 1.0000 80 chr8:124054105-124054185 1.0000 80 chr19:47942188-47942268 1.0000 80 chr17:77702489-77702569 1.0000 80 chr9:131965178-131965258 1.0000 80 chr19:4304532-4304612 1.0000 80 chr6:157801086-157801166 1.0000 80 chr6:43215026-43215106 1.0000 80 chr19:45988712-45988792 1.0000 80 chr12:861520-861600 1.0000 80 chr5:178157717-178157797 1.0000 80 chr19:40697262-40697342 1.0000 80 chr16:46918130-46918210 1.0000 80 chr7:150689947-150690027 1.0000 80 chr19:42463532-42463612 1.0000 80 chr9:138853253-138853333 1.0000 80 chr20:40322142-40322222 1.0000 80 chr11:69614414-69614494 1.0000 80 chr1:31327130-31327210 1.0000 80 chr2:38892990-38893070 1.0000 80 chr16:58426723-58426803 1.0000 80 chr19:49262478-49262558 1.0000 80 chr10:111985587-11198566 1.0000 80 chr10:72288716-72288796 1.0000 80 chr1:205744604-205744684 1.0000 80 chr16:29687592-29687672 1.0000 80 chr19:57946550-57946630 1.0000 80 chr12:110151311-11015139 1.0000 80 chr6:14800251-14800331 1.0000 80 chr4:7075465-7075545 1.0000 80 chr19:41084515-41084595 1.0000 80 chr16:53468290-53468370 1.0000 80 chr2:232646292-232646372 1.0000 80 chr9:132346484-132346564 1.0000 80 chr1:20767411-20767491 1.0000 80 chr11:60681311-60681391 1.0000 80 chr3:61235753-61235833 1.0000 80 chr19:55708326-55708406 1.0000 80 chr1:224544442-224544522 1.0000 80 chr16:84300112-84300192 1.0000 80 chr9:97021486-97021566 1.0000 80 chr6:52929627-52929707 1.0000 80 chr13:26827953-26828033 1.0000 80 chr2:217277069-217277149 1.0000 80 chr22:22020217-22020297 1.0000 80 chr20:45779474-45779554 1.0000 80 chr1:17338459-17338539 1.0000 80 chr1:243419203-243419283 1.0000 80 chr10:73083337-73083417 1.0000 80 chr3:69788447-69788527 1.0000 80 chr1:151584374-151584454 1.0000 80 chr1:18779222-18779302 1.0000 80 chr18:9913578-9913658 1.0000 80 chr6:6890948-6891028 1.0000 80 chr21:35340754-35340834 1.0000 80 chr16:74729864-74729944 1.0000 80 chr2:39005282-39005362 1.0000 80 chr19:48866427-48866507 1.0000 80 chr8:67525733-67525813 1.0000 80 chr13:41837989-41838069 1.0000 80 chr10:38383176-38383256 1.0000 80 chr20:52535657-52535737 1.0000 80 chr19:36208416-36208496 1.0000 80 chr19:41571013-41571093 1.0000 80 chr19:17721334-17721414 1.0000 80 chr19:44809190-44809270 1.0000 80 chr19:10028075-10028155 1.0000 80 chr3:14361228-14361308 1.0000 80 chr19:19887278-19887358 1.0000 80 chr16:19535077-19535157 1.0000 80 chr6:44101535-44101615 1.0000 80 chr19:51152938-51153018 1.0000 80 chr1:155113005-155113085 1.0000 80 chr12:88535958-88536038 1.0000 80 chr19:47049933-47050013 1.0000 80 chr13:31736508-31736588 1.0000 80 chr13:41768695-41768775 1.0000 80 chr2:86332688-86332768 1.0000 80 chr19:6812068-6812148 1.0000 80 chr2:44001101-44001181 1.0000 80 chr15:76461555-76461635 1.0000 80 chr2:36845625-36845705 1.0000 80 chr12:124594394-12459447 1.0000 80 chr12:56710133-56710213 1.0000 80 chr9:134955269-134955349 1.0000 80 chr14:73493967-73494047 1.0000 80 chr19:44598415-44598495 1.0000 80 chr22:39886319-39886399 1.0000 80 chr10:43048322-43048402 1.0000 80 chr19:38397741-38397821 1.0000 80 chr16:31119649-31119729 1.0000 80 chr19:49947081-49947161 1.0000 80 chr1:147142675-147142755 1.0000 80 chr2:10552683-10552763 1.0000 80 chrX:48980199-48980279 1.0000 80 chr6:41703385-41703465 1.0000 80 chr17:46908255-46908335 1.0000 80 chr6:15245641-15245721 1.0000 80 chr19:1241636-1241716 1.0000 80 chr19:59086702-59086782 1.0000 80 chr10:103892664-10389274 1.0000 80 chr1:234812121-234812201 1.0000 80 chr10:104262615-10426269 1.0000 80 chr19:13512344-13512424 1.0000 80 chr6:33783805-33783885 1.0000 80 chr20:25677517-25677597 1.0000 80 chr11:73661963-73662043 1.0000 80 chr3:50397061-50397141 1.0000 80 chr16:31045650-31045730 1.0000 80 chr19:58838285-58838365 1.0000 80 chr17:4634602-4634682 1.0000 80 chr20:49116086-49116166 1.0000 80 chr4:2420551-2420631 1.0000 80 chr20:45810098-45810178 1.0000 80 chr3:50388511-50388591 1.0000 80 chr16:15150037-15150117 1.0000 80 chr8:140688118-140688198 1.0000 80 chr5:178286879-178286959 1.0000 80 chr12:32832073-32832153 1.0000 80 chr12:119667748-11966782 1.0000 80 chr21:15755514-15755594 1.0000 80 chr9:133003018-133003098 1.0000 80 chr9:132079961-132080041 1.0000 80 chr11:134123334-13412341 1.0000 80 chr12:121488680-12148876 1.0000 80 chr7:76751692-76751772 1.0000 80 chr2:54950535-54950615 1.0000 80 chr14:81408123-81408203 1.0000 80 chr6:6737557-6737637 1.0000 80 chr16:87009105-87009185 1.0000 80 chr19:14743255-14743335 1.0000 80 chr21:35402523-35402603 1.0000 80 chr11:64456045-64456125 1.0000 80 chr6:167000380-167000460 1.0000 80 chr12:54582820-54582900 1.0000 80 chr2:88844831-88844911 1.0000 80 chr20:48732481-48732561 1.0000 80 chr1:15288457-15288537 1.0000 80 chr1:156308547-156308627 1.0000 80 chr14:68286393-68286473 1.0000 80 chr16:4321887-4321967 1.0000 80 chr11:107436426-10743650 1.0000 80 chr17:38083866-38083946 1.0000 80 chr22:33300165-33300245 1.0000 80 chr2:133104956-133105036 1.0000 80 chr1:247095514-247095594 1.0000 80 chr3:13933300-13933380 1.0000 80 chr1:156052280-156052360 1.0000 80 chr8:145159789-145159869 1.0000 80 chr2:180872037-180872117 1.0000 80 chr11:46271172-46271252 1.0000 80 chr17:40075335-40075415 1.0000 80 chr2:136288409-136288489 1.0000 80 chr19:50501074-50501154 1.0000 80 chr10:71754201-71754281 1.0000 80 chr12:49449932-49450012 1.0000 80 chr17:21226434-21226514 1.0000 80 chr5:153211681-153211761 1.0000 80 chr17:17653421-17653501 1.0000 80 chr16:30103254-30103334 1.0000 80 chr3:126422975-126423055 1.0000 80 chr19:49223922-49224002 1.0000 80 chr4:6374774-6374854 1.0000 80 chr19:49835010-49835090 1.0000 80 chr9:130965520-130965600 1.0000 80 chr16:9147099-9147179 1.0000 80 chr10:38265598-38265678 1.0000 80 chr18:60382251-60382331 1.0000 80 chr2:99952928-99953008 1.0000 80 chr19:4180275-4180355 1.0000 80 chr19:52097740-52097820 1.0000 80 chr19:37569243-37569323 1.0000 80 chr9:101172675-101172755 1.0000 80 chr16:67700644-67700724 1.0000 80 chr7:152887689-152887769 1.0000 80 chr20:62694375-62694455 1.0000 80 chr7:5553431-5553511 1.0000 80 chr17:76250656-76250736 1.0000 80 chr2:2617313-2617393 1.0000 80 chr7:102389313-102389393 1.0000 80 chr11:66138872-66138952 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_SIX5/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/SIX5.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.212 C 0.289 G 0.294 T 0.205 Background letter frequencies (from file dataset with add-one prior applied): A 0.212 C 0.289 G 0.294 T 0.205 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ACTACAWY MEME-1 width = 8 sites = 126 llr = 1110 E-value = 8.5e-153 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 Description -------------------------------------------------------------------------------- Simplified A a::9:951 pos.-specific C :a::a:13 probability G :::1:111 matrix T ::a:::45 bits 2.3 * 2.1 * * 1.8 ****** 1.6 ****** Relative 1.4 ****** Entropy 1.1 ****** (12.7 bits) 0.9 ****** 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel ACTACAAT consensus TC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:2617313-2617393 8 1.39e-05 AGCGTaa actacaat ccccaggatg chr9:101172675-101172755 17 1.39e-05 aagccctgaa actacatt tcccagaatc chr19:37569243-37569323 36 1.39e-05 GGAGCGCTGG ACTACATT TCCCAGAGGC chr19:4180275-4180355 11 1.39e-05 AATATGaaag actacatt tcccagcaac chr4:6374774-6374854 24 1.39e-05 ctacatgtgg actacatt tcccagcagc chr5:153211681-153211761 16 1.39e-05 acacaactgg actacatt tcccagcagc chr22:33300165-33300245 12 1.39e-05 ccccatctgg actacatt tcccagcagg chr11:107436426-10743650 38 1.39e-05 AGAAAACTGC ACTACATT TCCCATGAGC chr14:68286393-68286473 6 1.39e-05 TATTA ACTACAAT TCCCAGCAAG chr2:88844831-88844911 9 1.39e-05 gaataaag actacatt tcccagcttc chr6:167000380-167000460 14 1.39e-05 cccagtgggg actacatt acccagccct chr9:133003018-133003098 8 1.39e-05 acaaagg actacatt tcccagcctc chr12:119667748-11966782 24 1.39e-05 TCAACAGGGg actacatt tcccagcctc chr8:140688118-140688198 10 1.39e-05 cacagataa actacatt tcccagactc chr19:58838285-58838365 12 1.39e-05 ACCAACGTCA ACTACAAT TCCCAGCAGG chr19:13512344-13512424 13 1.39e-05 ctaatcagag actacatt tcccagcctc chr19:59086702-59086782 16 1.39e-05 TCGTTGCCAA ACTACATT TTCCGGCAGT chr12:124594394-12459447 18 1.39e-05 agctagtgaa actacatt tcccaggctc chr2:36845625-36845705 20 1.39e-05 acacagctgg actacatt tcccaggcac chr2:44001101-44001181 10 1.39e-05 CTCCTGAAA ACTACATT TCCCATGATG chr19:51152938-51153018 56 1.39e-05 TGGACTCAGA ACTACATT TCCCATGAGC chr3:14361228-14361308 21 1.39e-05 actcagctgg actacatt tcccaggctc chr19:10028075-10028155 10 1.39e-05 ccccagaaa actacatt tcccagattc chr19:17721334-17721414 6 1.39e-05 taaag actacatt tcccagcatt chr19:41571013-41571093 3 1.39e-05 aa actacatt tcccaagctc chr16:84300112-84300192 7 1.39e-05 ataaag actacatt tcccagcctc chr11:60681311-60681391 2 1.39e-05 A ACTACATT GCCCACAATG chr9:132346484-132346564 11 1.39e-05 ctggcccaaa actacatt tcccagcatc chr2:232646292-232646372 8 1.39e-05 GACAGAG ACTACATT TCCCAGCATT chr6:14800251-14800331 26 1.39e-05 tcagatgaag actacatt tcccaggctc chr19:57946550-57946630 46 1.39e-05 CAACGTGAGA ACTACATT ACCCAGAAGA chr1:205744604-205744684 4 1.39e-05 GGC ACTACATT TCCCAGCTTT chr11:69614414-69614494 5 1.39e-05 aaaa actacatt tcccagactt chr19:4304532-4304612 26 1.39e-05 CCAGCGCGGA ACTACATT TCCCAGGCGG chr19:47942188-47942268 42 1.39e-05 aaagagctga actacatt tcccagcctc chr5:131526030-131526110 5 1.39e-05 gtaa actacatt tcccagattc chr20:750599-750679 4 1.39e-05 agg actacatt tcccagcctt chr16:30908459-30908539 15 1.39e-05 CCGGGTCAGG ACTACATT CCCCAGCACG chr14:82000454-82000534 16 1.39e-05 CTCATCCGAG ACTACAAT TCCCAGAATG chr20:49084694-49084774 11 1.39e-05 tgcagtaaag actacatt tcccagcctc chr19:51963844-51963924 15 1.39e-05 ccaggctgga actacaat tcccagaatc chr1:22755262-22755342 16 1.39e-05 gggtataaag actacatt tcccagcata chr8:82755020-82755100 7 1.39e-05 GAGAAG ACTACAAT TCCCAGAAGG chr7:1465366-1465446 7 1.39e-05 gaggga actacatt ccccagcatc chr19:50651539-50651619 4 1.39e-05 TGG ACTACATT TCCCAGAAAC chr19:49385137-49385217 4 1.39e-05 TAA ACTACAAT TCCCAATAGG chr19:48922673-48922753 1 1.39e-05 . ACTACATT TCCCAGCAGC chr11:66138872-66138952 11 3.36e-05 TCCGGAGCGG ACTACAAC CCCGATCACC chr7:152887689-152887769 13 3.36e-05 gggcagtcgg actacatc tcccagaatc chr19:49223922-49224002 39 3.36e-05 CGGGATAAGA ACTACAAC TCCCAGAAAG chr3:13933300-13933380 28 3.36e-05 GACTTtagaa actacatc tcccagcatc chr11:64456045-64456125 40 3.36e-05 GCGACTGGGA ACTACAAC TCCCAGCAGC chr16:87009105-87009185 18 3.36e-05 tccagaaaaa actacatc ccccagcatc chr11:134123334-13412341 43 3.36e-05 TCGTGGGAGG ACTACAAC CCCCAGGGTG chr12:32832073-32832153 18 3.36e-05 CCGCTCCAGA ACTACAAC TCCCAGCAGG chr11:73661963-73662043 39 3.36e-05 GGGAAGTGGG ACTACAAC TCCCAGAGTG chr1:147142675-147142755 43 3.36e-05 AGCTGCGGAA ACTACAAC TCCCACAAGG chr16:31119649-31119729 15 3.36e-05 CTCAGACCAA ACTACAAC TCCCAGGACC chr14:73493967-73494047 23 3.36e-05 ACTCTGAATG ACTACAAC TCCCAGTACT chr12:56710133-56710213 5 3.36e-05 GGAA ACTACATC TCCCAGGAAG chr19:19887278-19887358 39 3.36e-05 CAGTAAAGAG ACTACAAC TCCCAGCATA chr19:48866427-48866507 7 3.36e-05 CCGGGA ACTACAAC TCCCAGGAGG chr16:74729864-74729944 7 3.36e-05 gccgga actacatc tcccagcctt chr1:243419203-243419283 73 3.36e-05 GAACGTGAGG ACTACAAC chr1:224544442-224544522 51 3.36e-05 TAAAATATGG ACTACAAC TCCCGGCATG chr19:55708326-55708406 2 3.36e-05 A ACTACAAC TCCCATGAGG chr19:40697262-40697342 30 3.36e-05 ACGGCCGGAG ACTACAAC TCCCAGGAGG chr12:861520-861600 3 3.36e-05 AA ACTACAAC TCCCACGAGG chr19:50836831-50836911 2 3.36e-05 G ACTACAAC GACCGTGATG chr19:49250485-49250565 5 3.36e-05 TAAG ACTACAAC TCCCAAAATG chr17:19912578-19912658 5 3.36e-05 GGGT ACTACATC TCCCAGCGAG chr19:50163163-50163243 5 3.36e-05 GAGG ACTACAAC TCCCTGCAGC chr14:24701754-24701834 20 3.36e-05 GGCAGAACGA ACTACATC TCCCATCGTG chr19:49422139-49422219 6 3.36e-05 TGAAA ACTACAAC TCCCATCAGC chr19:49148180-49148260 4 3.36e-05 GGA ACTACAAC TCCCAGCAGG chr19:54480863-54480943 1 3.36e-05 . ACTACAAC TCCCATGATC chr1:154979441-154979521 10 3.36e-05 TCAAGGGGG ACTACAAC TCCCAAGGTA chr19:49310026-49310106 2 3.36e-05 A ACTACAAC TCCCATGAAG chr2:39005282-39005362 5 4.80e-05 TAGG ACTACAAA ACAGAGGTTT chr2:217277069-217277149 21 4.80e-05 CCCGGCCCGA ACTACAAA TCCCAGAAGA chr6:52929627-52929707 3 4.80e-05 CG ACTACAAA TCCCAGAGTG chr12:110151311-11015139 1 4.80e-05 . ACTACAAA AACCAGCACG chr7:150689947-150690027 3 4.80e-05 GA ACTACAAA CCCCAGCATG chr19:55677437-55677517 8 4.80e-05 AAAATGG ACTACAAA TCCCAGTAGG chr19:46027160-46027240 6 4.80e-05 CAGGA ACTACAAA TCCCAGAATA chr20:62694375-62694455 17 8.75e-05 GTGGGTCAGG ACTACACT TCCCAGGAGG chr16:30103254-30103334 6 8.75e-05 TCGGA ACTACACT TCCCGGCAGG chr2:54950535-54950615 63 8.75e-05 CGCAGAGAGG ACTACACT TCCCAGGATG chr5:178286879-178286959 19 8.75e-05 AACGCGTGGA ACTACACT TCCCAGAAAG chr3:50397061-50397141 19 8.75e-05 TCTGGCTAGA ACTACAAG TCCCAGGAGG chr17:46908255-46908335 29 8.75e-05 TCACCTGAAC ACTACAAG TCCCAGCAAG chr19:44809190-44809270 63 8.75e-05 TCACTCCTGG ACTACAGT TCCCAGAATG chr19:45988712-45988792 3 8.75e-05 CA ACTACAAG TCCCAGCAGG chr1:243418776-243418856 12 8.75e-05 ACCAACAAGG ACTACAGT TCCCAGCGGG chr15:63481580-63481660 21 8.75e-05 CCCCGGAGGA ACTACAAG TCCCATGAAG chr17:7358812-7358892 5 8.75e-05 GAGA ACTACAGT TCCCAGAAGA chr19:54396426-54396506 1 8.75e-05 . ACTACAGT TCCCAGAAGA chr19:55816992-55817072 3 8.75e-05 GA ACTACAAG TCCCAGCAGC chr19:55709049-55709129 2 8.75e-05 A ACTACAGT TCCCATGAGG chr9:132079961-132080041 4 1.07e-04 tgg actgcatt tcccagcctc chr19:36208416-36208496 5 1.07e-04 GCGA ACTGCATT TCCCAGGGCC chr9:72435530-72435610 60 1.07e-04 CGCTACCCTC ACTGCATT CTGGGAAATG chr11:46134684-46134764 49 1.07e-04 TTAAGCAAAA ACTGCAAT GCATACTGGG chr19:50501074-50501154 8 1.26e-04 cataaaa actacgtt tcccagcttc chr16:53468290-53468370 6 1.26e-04 CCTGG ACTACGTT TCCCAGCAGC chr10:111985587-11198566 44 1.26e-04 CGGCGTGTGC ACTACGAT TCCCGGCAGC chr7:20257099-20257179 32 1.26e-04 AGGCAAGAGA ACTACGAT ACCCACAATT chr16:4321887-4321967 29 1.54e-04 GACACGGAGA ACTACAGC TCCCGCGAGG chr6:10147338-10147418 41 1.54e-04 ctttgcaagg actacacc tcccaggatg chr17:40559668-40559748 17 1.54e-04 CTGTTACCCA ACTACACC TCCCAGCAGG chr19:1241636-1241716 5 1.81e-04 CAAA ACTGCAAC CCCCAGAATA chr19:6812068-6812148 25 1.81e-04 cagtcacatg actgcatc cacatgcaag chr22:22020217-22020297 28 2.01e-04 GCGCTAGCGA ACCACAAT TCCCAGCACG chr10:72288716-72288796 19 2.01e-04 aaatcatgtg accacaat gagttgcaag chr9:130965520-130965600 4 2.28e-04 AAA ACTACGAC ACCCATGATG chr12:104323504-10432358 32 2.28e-04 GAGACCAAAG ACTACGAC CCCCAGCATT chr10:73083337-73083417 27 2.76e-04 taggcatgtg accacatc agcttgcaga chrX:47050071-47050151 36 2.76e-04 TTTGGGCCGT ACCACAAC CTGTAGGGTC chr16:46918130-46918210 67 3.04e-04 AGCCAGGGGA ACTACAGG GCCCAG chr1:18779222-18779302 45 3.24e-04 cccccacatg actgcaaa ggggtctggg chr2:38892990-38893070 32 3.62e-04 CCTCCCAAAA ACTACCAT TCCCAACATG chr17:7094940-7095020 2 3.62e-04 G ACTCCAAT TCCCAACAGC chr19:49835010-49835090 41 4.17e-04 cctcaacttc actgcaag gagacctggg chr21:35340754-35340834 43 4.17e-04 gaccatggct actgcaag ggagactggg chr16:33569512-33569592 47 4.17e-04 gccatgcttt actgcaag gaatgctggg chr20:25677517-25677597 16 4.91e-04 CGCGGCCGGG ACTACGCT ACCCAGCATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:2617313-2617393 1.4e-05 7_[+1]_65 chr9:101172675-101172755 1.4e-05 16_[+1]_56 chr19:37569243-37569323 1.4e-05 35_[+1]_37 chr19:4180275-4180355 1.4e-05 10_[+1]_62 chr4:6374774-6374854 1.4e-05 23_[+1]_49 chr5:153211681-153211761 1.4e-05 15_[+1]_57 chr22:33300165-33300245 1.4e-05 11_[+1]_61 chr11:107436426-10743650 1.4e-05 37_[+1]_35 chr14:68286393-68286473 1.4e-05 5_[+1]_67 chr2:88844831-88844911 1.4e-05 8_[+1]_64 chr6:167000380-167000460 1.4e-05 13_[+1]_59 chr9:133003018-133003098 1.4e-05 7_[+1]_65 chr12:119667748-11966782 1.4e-05 23_[+1]_49 chr8:140688118-140688198 1.4e-05 9_[+1]_63 chr19:58838285-58838365 1.4e-05 11_[+1]_61 chr19:13512344-13512424 1.4e-05 12_[+1]_60 chr19:59086702-59086782 1.4e-05 15_[+1]_57 chr12:124594394-12459447 1.4e-05 17_[+1]_55 chr2:36845625-36845705 1.4e-05 19_[+1]_53 chr2:44001101-44001181 1.4e-05 9_[+1]_63 chr19:51152938-51153018 1.4e-05 55_[+1]_17 chr3:14361228-14361308 1.4e-05 20_[+1]_52 chr19:10028075-10028155 1.4e-05 9_[+1]_63 chr19:17721334-17721414 1.4e-05 5_[+1]_67 chr19:41571013-41571093 1.4e-05 2_[+1]_70 chr16:84300112-84300192 1.4e-05 6_[+1]_66 chr11:60681311-60681391 1.4e-05 1_[+1]_71 chr9:132346484-132346564 1.4e-05 10_[+1]_62 chr2:232646292-232646372 1.4e-05 7_[+1]_65 chr6:14800251-14800331 1.4e-05 25_[+1]_47 chr19:57946550-57946630 1.4e-05 45_[+1]_27 chr1:205744604-205744684 1.4e-05 3_[+1]_69 chr11:69614414-69614494 1.4e-05 4_[+1]_68 chr19:4304532-4304612 1.4e-05 25_[+1]_47 chr19:47942188-47942268 1.4e-05 41_[+1]_31 chr5:131526030-131526110 1.4e-05 4_[+1]_68 chr20:750599-750679 1.4e-05 3_[+1]_69 chr16:30908459-30908539 1.4e-05 14_[+1]_58 chr14:82000454-82000534 1.4e-05 15_[+1]_57 chr20:49084694-49084774 1.4e-05 10_[+1]_62 chr19:51963844-51963924 1.4e-05 14_[+1]_58 chr1:22755262-22755342 1.4e-05 15_[+1]_57 chr8:82755020-82755100 1.4e-05 6_[+1]_66 chr7:1465366-1465446 1.4e-05 6_[+1]_66 chr19:50651539-50651619 1.4e-05 3_[+1]_69 chr19:49385137-49385217 1.4e-05 3_[+1]_69 chr19:48922673-48922753 1.4e-05 [+1]_72 chr11:66138872-66138952 3.4e-05 10_[+1]_62 chr7:152887689-152887769 3.4e-05 12_[+1]_60 chr19:49223922-49224002 3.4e-05 38_[+1]_34 chr3:13933300-13933380 3.4e-05 27_[+1]_45 chr11:64456045-64456125 3.4e-05 39_[+1]_33 chr16:87009105-87009185 3.4e-05 17_[+1]_55 chr11:134123334-13412341 3.4e-05 42_[+1]_30 chr12:32832073-32832153 3.4e-05 17_[+1]_55 chr11:73661963-73662043 3.4e-05 38_[+1]_34 chr1:147142675-147142755 3.4e-05 42_[+1]_30 chr16:31119649-31119729 3.4e-05 14_[+1]_58 chr14:73493967-73494047 3.4e-05 22_[+1]_50 chr12:56710133-56710213 3.4e-05 4_[+1]_68 chr19:19887278-19887358 3.4e-05 38_[+1]_34 chr19:48866427-48866507 3.4e-05 6_[+1]_66 chr16:74729864-74729944 3.4e-05 6_[+1]_66 chr1:243419203-243419283 3.4e-05 72_[+1] chr1:224544442-224544522 3.4e-05 50_[+1]_22 chr19:55708326-55708406 3.4e-05 1_[+1]_71 chr19:40697262-40697342 3.4e-05 29_[+1]_43 chr12:861520-861600 3.4e-05 2_[+1]_70 chr19:50836831-50836911 3.4e-05 1_[+1]_71 chr19:49250485-49250565 3.4e-05 4_[+1]_68 chr17:19912578-19912658 3.4e-05 4_[+1]_68 chr19:50163163-50163243 3.4e-05 4_[+1]_68 chr14:24701754-24701834 3.4e-05 19_[+1]_53 chr19:49422139-49422219 3.4e-05 5_[+1]_67 chr19:49148180-49148260 3.4e-05 3_[+1]_69 chr19:54480863-54480943 3.4e-05 [+1]_72 chr1:154979441-154979521 3.4e-05 9_[+1]_63 chr19:49310026-49310106 3.4e-05 1_[+1]_71 chr2:39005282-39005362 4.8e-05 4_[+1]_68 chr2:217277069-217277149 4.8e-05 20_[+1]_52 chr6:52929627-52929707 4.8e-05 2_[+1]_70 chr12:110151311-11015139 4.8e-05 [+1]_72 chr7:150689947-150690027 4.8e-05 2_[+1]_70 chr19:55677437-55677517 4.8e-05 7_[+1]_65 chr19:46027160-46027240 4.8e-05 5_[+1]_67 chr20:62694375-62694455 8.8e-05 16_[+1]_56 chr16:30103254-30103334 8.8e-05 5_[+1]_67 chr2:54950535-54950615 8.8e-05 62_[+1]_10 chr5:178286879-178286959 8.8e-05 18_[+1]_54 chr3:50397061-50397141 8.8e-05 18_[+1]_54 chr17:46908255-46908335 8.8e-05 28_[+1]_44 chr19:44809190-44809270 8.8e-05 62_[+1]_10 chr19:45988712-45988792 8.8e-05 2_[+1]_70 chr1:243418776-243418856 8.8e-05 11_[+1]_61 chr15:63481580-63481660 8.8e-05 20_[+1]_52 chr17:7358812-7358892 8.8e-05 4_[+1]_68 chr19:54396426-54396506 8.8e-05 [+1]_72 chr19:55816992-55817072 8.8e-05 2_[+1]_70 chr19:55709049-55709129 8.8e-05 1_[+1]_71 chr9:132079961-132080041 0.00011 3_[+1]_69 chr19:36208416-36208496 0.00011 4_[+1]_68 chr9:72435530-72435610 0.00011 59_[+1]_13 chr11:46134684-46134764 0.00011 48_[+1]_24 chr19:50501074-50501154 0.00013 7_[+1]_65 chr16:53468290-53468370 0.00013 5_[+1]_67 chr10:111985587-11198566 0.00013 43_[+1]_29 chr7:20257099-20257179 0.00013 31_[+1]_41 chr16:4321887-4321967 0.00015 28_[+1]_44 chr6:10147338-10147418 0.00015 40_[+1]_32 chr17:40559668-40559748 0.00015 16_[+1]_56 chr19:1241636-1241716 0.00018 4_[+1]_68 chr19:6812068-6812148 0.00018 24_[+1]_48 chr22:22020217-22020297 0.0002 27_[+1]_45 chr10:72288716-72288796 0.0002 18_[+1]_54 chr9:130965520-130965600 0.00023 3_[+1]_69 chr12:104323504-10432358 0.00023 31_[+1]_41 chr10:73083337-73083417 0.00028 26_[+1]_46 chrX:47050071-47050151 0.00028 35_[+1]_37 chr16:46918130-46918210 0.0003 66_[+1]_6 chr1:18779222-18779302 0.00032 44_[+1]_28 chr2:38892990-38893070 0.00036 31_[+1]_41 chr17:7094940-7095020 0.00036 1_[+1]_71 chr19:49835010-49835090 0.00042 40_[+1]_32 chr21:35340754-35340834 0.00042 42_[+1]_30 chr16:33569512-33569592 0.00042 46_[+1]_26 chr20:25677517-25677597 0.00049 15_[+1]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTACAWY width=8 seqs=126 chr2:2617313-2617393 ( 8) ACTACAAT 1 chr9:101172675-101172755 ( 17) ACTACATT 1 chr19:37569243-37569323 ( 36) ACTACATT 1 chr19:4180275-4180355 ( 11) ACTACATT 1 chr4:6374774-6374854 ( 24) ACTACATT 1 chr5:153211681-153211761 ( 16) ACTACATT 1 chr22:33300165-33300245 ( 12) ACTACATT 1 chr11:107436426-10743650 ( 38) ACTACATT 1 chr14:68286393-68286473 ( 6) ACTACAAT 1 chr2:88844831-88844911 ( 9) ACTACATT 1 chr6:167000380-167000460 ( 14) ACTACATT 1 chr9:133003018-133003098 ( 8) ACTACATT 1 chr12:119667748-11966782 ( 24) ACTACATT 1 chr8:140688118-140688198 ( 10) ACTACATT 1 chr19:58838285-58838365 ( 12) ACTACAAT 1 chr19:13512344-13512424 ( 13) ACTACATT 1 chr19:59086702-59086782 ( 16) ACTACATT 1 chr12:124594394-12459447 ( 18) ACTACATT 1 chr2:36845625-36845705 ( 20) ACTACATT 1 chr2:44001101-44001181 ( 10) ACTACATT 1 chr19:51152938-51153018 ( 56) ACTACATT 1 chr3:14361228-14361308 ( 21) ACTACATT 1 chr19:10028075-10028155 ( 10) ACTACATT 1 chr19:17721334-17721414 ( 6) ACTACATT 1 chr19:41571013-41571093 ( 3) ACTACATT 1 chr16:84300112-84300192 ( 7) ACTACATT 1 chr11:60681311-60681391 ( 2) ACTACATT 1 chr9:132346484-132346564 ( 11) ACTACATT 1 chr2:232646292-232646372 ( 8) ACTACATT 1 chr6:14800251-14800331 ( 26) ACTACATT 1 chr19:57946550-57946630 ( 46) ACTACATT 1 chr1:205744604-205744684 ( 4) ACTACATT 1 chr11:69614414-69614494 ( 5) ACTACATT 1 chr19:4304532-4304612 ( 26) ACTACATT 1 chr19:47942188-47942268 ( 42) ACTACATT 1 chr5:131526030-131526110 ( 5) ACTACATT 1 chr20:750599-750679 ( 4) ACTACATT 1 chr16:30908459-30908539 ( 15) ACTACATT 1 chr14:82000454-82000534 ( 16) ACTACAAT 1 chr20:49084694-49084774 ( 11) ACTACATT 1 chr19:51963844-51963924 ( 15) ACTACAAT 1 chr1:22755262-22755342 ( 16) ACTACATT 1 chr8:82755020-82755100 ( 7) ACTACAAT 1 chr7:1465366-1465446 ( 7) ACTACATT 1 chr19:50651539-50651619 ( 4) ACTACATT 1 chr19:49385137-49385217 ( 4) ACTACAAT 1 chr19:48922673-48922753 ( 1) ACTACATT 1 chr11:66138872-66138952 ( 11) ACTACAAC 1 chr7:152887689-152887769 ( 13) ACTACATC 1 chr19:49223922-49224002 ( 39) ACTACAAC 1 chr3:13933300-13933380 ( 28) ACTACATC 1 chr11:64456045-64456125 ( 40) ACTACAAC 1 chr16:87009105-87009185 ( 18) ACTACATC 1 chr11:134123334-13412341 ( 43) ACTACAAC 1 chr12:32832073-32832153 ( 18) ACTACAAC 1 chr11:73661963-73662043 ( 39) ACTACAAC 1 chr1:147142675-147142755 ( 43) ACTACAAC 1 chr16:31119649-31119729 ( 15) ACTACAAC 1 chr14:73493967-73494047 ( 23) ACTACAAC 1 chr12:56710133-56710213 ( 5) ACTACATC 1 chr19:19887278-19887358 ( 39) ACTACAAC 1 chr19:48866427-48866507 ( 7) ACTACAAC 1 chr16:74729864-74729944 ( 7) ACTACATC 1 chr1:243419203-243419283 ( 73) ACTACAAC 1 chr1:224544442-224544522 ( 51) ACTACAAC 1 chr19:55708326-55708406 ( 2) ACTACAAC 1 chr19:40697262-40697342 ( 30) ACTACAAC 1 chr12:861520-861600 ( 3) ACTACAAC 1 chr19:50836831-50836911 ( 2) ACTACAAC 1 chr19:49250485-49250565 ( 5) ACTACAAC 1 chr17:19912578-19912658 ( 5) ACTACATC 1 chr19:50163163-50163243 ( 5) ACTACAAC 1 chr14:24701754-24701834 ( 20) ACTACATC 1 chr19:49422139-49422219 ( 6) ACTACAAC 1 chr19:49148180-49148260 ( 4) ACTACAAC 1 chr19:54480863-54480943 ( 1) ACTACAAC 1 chr1:154979441-154979521 ( 10) ACTACAAC 1 chr19:49310026-49310106 ( 2) ACTACAAC 1 chr2:39005282-39005362 ( 5) ACTACAAA 1 chr2:217277069-217277149 ( 21) ACTACAAA 1 chr6:52929627-52929707 ( 3) ACTACAAA 1 chr12:110151311-11015139 ( 1) ACTACAAA 1 chr7:150689947-150690027 ( 3) ACTACAAA 1 chr19:55677437-55677517 ( 8) ACTACAAA 1 chr19:46027160-46027240 ( 6) ACTACAAA 1 chr20:62694375-62694455 ( 17) ACTACACT 1 chr16:30103254-30103334 ( 6) ACTACACT 1 chr2:54950535-54950615 ( 63) ACTACACT 1 chr5:178286879-178286959 ( 19) ACTACACT 1 chr3:50397061-50397141 ( 19) ACTACAAG 1 chr17:46908255-46908335 ( 29) ACTACAAG 1 chr19:44809190-44809270 ( 63) ACTACAGT 1 chr19:45988712-45988792 ( 3) ACTACAAG 1 chr1:243418776-243418856 ( 12) ACTACAGT 1 chr15:63481580-63481660 ( 21) ACTACAAG 1 chr17:7358812-7358892 ( 5) ACTACAGT 1 chr19:54396426-54396506 ( 1) ACTACAGT 1 chr19:55816992-55817072 ( 3) ACTACAAG 1 chr19:55709049-55709129 ( 2) ACTACAGT 1 chr9:132079961-132080041 ( 4) ACTGCATT 1 chr19:36208416-36208496 ( 5) ACTGCATT 1 chr9:72435530-72435610 ( 60) ACTGCATT 1 chr11:46134684-46134764 ( 49) ACTGCAAT 1 chr19:50501074-50501154 ( 8) ACTACGTT 1 chr16:53468290-53468370 ( 6) ACTACGTT 1 chr10:111985587-11198566 ( 44) ACTACGAT 1 chr7:20257099-20257179 ( 32) ACTACGAT 1 chr16:4321887-4321967 ( 29) ACTACAGC 1 chr6:10147338-10147418 ( 41) ACTACACC 1 chr17:40559668-40559748 ( 17) ACTACACC 1 chr19:1241636-1241716 ( 5) ACTGCAAC 1 chr19:6812068-6812148 ( 25) ACTGCATC 1 chr22:22020217-22020297 ( 28) ACCACAAT 1 chr10:72288716-72288796 ( 19) ACCACAAT 1 chr9:130965520-130965600 ( 4) ACTACGAC 1 chr12:104323504-10432358 ( 32) ACTACGAC 1 chr10:73083337-73083417 ( 27) ACCACATC 1 chrX:47050071-47050151 ( 36) ACCACAAC 1 chr16:46918130-46918210 ( 67) ACTACAGG 1 chr1:18779222-18779302 ( 45) ACTGCAAA 1 chr2:38892990-38893070 ( 32) ACTACCAT 1 chr17:7094940-7095020 ( 2) ACTCCAAT 1 chr19:49835010-49835090 ( 41) ACTGCAAG 1 chr21:35340754-35340834 ( 43) ACTGCAAG 1 chr16:33569512-33569592 ( 47) ACTGCAAG 1 chr20:25677517-25677597 ( 16) ACTACGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.89406 E= 8.5e-153 224 -1362 -1362 -1362 -1362 179 -1362 -1362 -1362 -318 -1362 224 211 -518 -189 -1362 -1362 179 -1362 -1362 214 -518 -240 -1362 112 -238 -240 106 -174 14 -204 141 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 126 E= 8.5e-153 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.031746 0.000000 0.968254 0.912698 0.007937 0.079365 0.000000 0.000000 1.000000 0.000000 0.000000 0.936508 0.007937 0.055556 0.000000 0.460317 0.055556 0.055556 0.428571 0.063492 0.317460 0.071429 0.547619 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTACAWY MEME-1 regular expression -------------------------------------------------------------------------------- ACTACA[AT][TC] -------------------------------------------------------------------------------- Time 4.67 secs. ******************************************************************************** ******************************************************************************** MOTIF TGGGARWT MEME-2 width = 8 sites = 149 llr = 1204 E-value = 1.6e-150 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::944: pos.-specific C 1::::1:1 probability G :aaa:41: matrix T 9::::159 bits 2.3 2.1 1.8 * * * 1.6 ***** * Relative 1.4 ***** * Entropy 1.1 ***** * (11.7 bits) 0.9 ***** ** 0.7 ***** ** 0.5 ***** ** 0.2 ******** 0.0 -------- Multilevel TGGGAATT consensus GA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:66138872-66138952 59 9.84e-06 AGTCGGCTGA TGGGAATT GTAGTTCGAT chr6:15245641-15245721 36 9.84e-06 CGGGGCAGGC TGGGAATT GTAGTTCCCA chr1:243419203-243419283 9 9.84e-06 GTGGTTTC TGGGAATT GTAGTGTAAC chr6:31866308-31866388 72 9.84e-06 CAGAGCTTTC TGGGAATT G chr19:54396426-54396506 71 9.84e-06 CAGGGTCTGA TGGGAATT AT chr7:102389313-102389393 26 3.37e-05 CATTGCCTCC TGGGAAAT GTGGTTTCTA chr17:76250656-76250736 73 3.37e-05 CGTGGCACGC TGGGAGTT chr20:62694375-62694455 56 3.37e-05 GCGTGGCGCC TGGGAGTT GTGGTCCAGA chr2:99952928-99953008 66 3.37e-05 CAAAGCATTG TGGGAGTT GCAGTTT chr16:9147099-9147179 57 3.37e-05 caagggatgc tgggaaat gtagtccagc chr19:49835010-49835090 55 3.37e-05 caaggagacc tgggaaat gaagtcctcc chr17:17653421-17653501 56 3.37e-05 caaggaaggc tgggaaat gtagtccagc chr17:21226434-21226514 62 3.37e-05 caaaggacgt tgggaaat gtagtcttca chr12:49449932-49450012 25 3.37e-05 CTAAGCATGC TGGGAGTT GTAGTCTCAG chr10:71754201-71754281 61 3.37e-05 caaaggcagc tgggaaat gtagtcttta chr17:38083866-38083946 47 3.37e-05 CGACGCCTTC TGGGAGTT GTAGTTTCTT chr1:156308547-156308627 73 3.37e-05 CCGGGCACAC TGGGAGTT chr1:15288457-15288537 58 3.37e-05 cagagggttc tgggaaat gtagtttcta chr20:48732481-48732561 65 3.37e-05 CAGTGCCTGA TGGGAGTT GTAGTACG chr21:35402523-35402603 45 3.37e-05 caagggaagc tgggaaat gtagttttcc chr14:81408123-81408203 13 3.37e-05 CTTGGCCGTC TGGGAGTT GTAGTCCATC chr12:121488680-12148876 61 3.37e-05 caagggaggc tgggaaat gtagtcttta chr21:15755514-15755594 10 3.37e-05 GCAGCCCCC TGGGAAAT GTAGTCCGCT chr20:45810098-45810178 60 3.37e-05 ccagggaagc tgggaaat gtagtccata chr4:2420551-2420631 73 3.37e-05 CTGTGTATTG TGGGAGTT chr20:49116086-49116166 52 3.37e-05 caagggaagt tgggaaat gtagtcttta chr17:4634602-4634682 11 3.37e-05 CAGCGGGCCC TGGGAGTT GTAGTTCATC chr6:33783805-33783885 60 3.37e-05 gcagggagcc tgggaaat gtagtttgtg chr2:10552683-10552763 56 3.37e-05 caagggaggc tgggaaat gtagtccggc chr9:134955269-134955349 47 3.37e-05 CGAAGACCTC TGGGAAAT GCAGTTCGCG chr15:76461555-76461635 47 3.37e-05 caaggagggc tgggaaat gtagtcttta chr19:6812068-6812148 49 3.37e-05 caaggagaga tgggaaat gcagtcctta chr19:47049933-47050013 52 3.37e-05 caagggaggc tgggaaat gtagtcccca chr1:155113005-155113085 52 3.37e-05 CGCGGCCTTC TGGGAGTT GTAGTTCACA chr6:44101535-44101615 38 3.37e-05 CATGGCACTC TGGGAGTT GTAGTGCTCA chr20:52535657-52535737 69 3.37e-05 caaaggaggc tgggaaat gtag chr10:38383176-38383256 40 3.37e-05 CGAGGGCTTG TGGGAAAT GAAGCGTGCA chr13:41837989-41838069 23 3.37e-05 CAAAGAATCC TGGGAGTT GTAGTTTACC chr21:35340754-35340834 57 3.37e-05 caagggagac tgggaaat gtagtctttg chr6:6890948-6891028 63 3.37e-05 caaggggacc tgggaaat gtagttctca chr1:18779222-18779302 59 3.37e-05 caaaggggtc tgggaaat gtagtcatct chr10:73083337-73083417 51 3.37e-05 cagagcaggc tgggaaat gtagtctttc chr20:45779474-45779554 65 3.37e-05 caagggagcc tgggaaat gtagtctt chr1:20767411-20767491 65 3.37e-05 caagggaggc tgggaaat gtagtctt chr4:7075465-7075545 58 3.37e-05 caaaggatgc tgggaaat gtagttttta chr16:29687592-29687672 40 3.37e-05 cagaggaagc tgggaaat gtagtttagt chr1:205744604-205744684 73 3.37e-05 CGAAGcctcc tgggaaat chr10:72288716-72288796 43 3.37e-05 caagggaggc tgggaaat gtagtcttca chr19:42463532-42463612 60 3.37e-05 CCGAGTATTG TGGGAGTT GTAGTCCTGA chr5:178157717-178157797 21 3.37e-05 CTGAGGCCGC TGGGAAAT GGAGTCCACG chr19:45988712-45988792 72 3.37e-05 CAGAGCCTCT TGGGAAAT G chr6:43215026-43215106 58 3.37e-05 CTCGGCCTGC TGGGAGTT GTAGTCTCAG chr9:131965178-131965258 66 3.37e-05 CACAGCATCA TGGGAGTT GTAGTTC chr17:77702489-77702569 61 3.37e-05 caaggaatgc tgggaaat gtagtctttc chr9:72435530-72435610 69 3.37e-05 CACTGCATTC TGGGAAAT GTAG chr19:50163163-50163243 63 3.37e-05 CTAGGGCTGC TGGGAGTT GTAGTTTTac chr14:24701754-24701834 66 3.37e-05 CGTTTCCCCC TGGGAGTT GTAGTCT chr16:33569512-33569592 61 3.37e-05 caaggaatgc tgggaaat gtagtctttc chr19:7616357-7616437 56 3.37e-05 TGAGGGATGC TGGGAAAT GGAGTTCCGC chr19:49479589-49479669 71 3.37e-05 CAGGGGCTGC TGGGAGTT GT chr17:7118414-7118494 69 3.37e-05 CGGGGCCTTA TGGGAGTT GGAG chr11:919198-919278 61 3.37e-05 cataggaggc tgggaaat gtagtcttga chr19:49148180-49148260 73 3.37e-05 CAGAGCCCCG TGGGAGTT chr19:507893-507973 60 3.37e-05 CGGGGCTTGC TGGGAGTT GTAGTGCGCG chr19:55690510-55690590 66 3.37e-05 CGAGTCATGC TGGGAGTT GTAGTAT chr19:51142563-51142643 65 3.37e-05 CAGGATCTGC TGGGAGTT GAAGTCCT chr19:49228256-49228336 64 3.37e-05 CAAAGTCTTC TGGGAGTT GTAGTCCAT chr19:49248612-49248692 67 3.37e-05 CGTTGCCTTC TGGGAGTT GTAGTT chr19:55815809-55815889 63 3.37e-05 TAGAGCCTCC TGGGAGTT GTAGTCCACT chr19:49013936-49014016 67 3.37e-05 CAAGGCATTG TGGGAGTT GTAGTT chr17:7094940-7095020 65 3.37e-05 CAGGGGCTGC TGGGAAAT GTAGTCCT chr19:54411496-54411576 60 3.37e-05 CCAGGGCTGA TGGGAAAT GTAGTCTCCG chr19:54480863-54480943 69 3.37e-05 CGGGGTCTCA TGGGAAAT GTAG chr1:154979441-154979521 53 3.37e-05 TGGTGCACAC TGGGAGTT GTAGTCCTTG chr19:49486854-49486934 67 3.37e-05 AAAGGCCTTC TGGGAGTT GTAGTT chr19:55831280-55831360 68 3.37e-05 CGGGGCATGC TGGGAGTT GTAGT chr19:49416528-49416608 70 3.37e-05 CAGGGTCTGC TGGGAGTT GTA chr9:101172675-101172755 70 4.78e-05 gaagcggtca tgggagAT TAG chr19:49947081-49947161 50 4.78e-05 CGAGGGCCGC TGGGAGAT GTAGTTCTCT chr19:49262478-49262558 70 4.78e-05 CACATCCTCA TGGGAGAT GTA chr2:27319257-27319337 53 4.78e-05 CAGTGCATTC TGGGAGAT GCAGTCTCCA chr19:48907010-48907090 20 4.78e-05 CATTGCATGC TGGGAGAT GTAGTCTCCT chr19:49385137-49385217 73 4.78e-05 CAAGTGATGA TGGGAGAT chr19:54682365-54682445 67 4.78e-05 TGGGGCCTGC TGGGAGAT GTAGTT chr8:145159789-145159869 55 5.73e-05 CGCTGCCTCC TGGGATTT GTAGTTCCAC chr3:50388511-50388591 66 5.73e-05 TGGTACACGC TGGGATTT GTAGTCT chr10:104262615-10426269 22 5.73e-05 CGCAGTACCC TGGGATTT GTGGTCTCCC chr16:58426723-58426803 62 5.73e-05 CGCTGCCCTT TGGGATTT GTAGTTTTCG chr19:55816992-55817072 70 5.73e-05 CTGGGGCTCA TGGGATTT GTA chr19:55709049-55709129 73 5.73e-05 CATGGTGTGA TGGGATTT chr18:60382251-60382331 26 8.05e-05 AAAGGACCGC TGGGACTT GTAGTCCACC chr17:40075335-40075415 54 8.05e-05 CGGGGCCTGC TGGGACTT GTAGTCCCGC chr19:14743255-14743335 56 8.05e-05 gatcagccaa tgggatat gagcaaatgt chr6:6737557-6737637 43 8.05e-05 CAGTGCATGC TGGGACTT GTAGTCTCCG chr2:54950535-54950615 11 8.05e-05 CGCGGAATCC TGGGACTT GTGGTCCCTT chr16:46918130-46918210 14 8.05e-05 CGGGGCGCTG TGGGACTT GTAGTTCGCG chr16:68482588-68482668 26 8.05e-05 CACAGCCTTC TGGGACTT ATAGTTCTTT chr8:82755020-82755100 65 8.05e-05 CTTTGCATCA TGGGACTT GTAGTCAT chr17:40559668-40559748 61 8.05e-05 CAGGGCATGC TGGGACTT GTAGTCTCTA chr11:46134684-46134764 63 8.05e-05 CAATGCATAC TGGGACTT GTAGTAAGTA chr19:49310026-49310106 71 9.44e-05 TGGAGGATTC TGGGACAT GC chr16:15150037-15150117 72 1.09e-04 CAAGGGGCGC TGGGAAGT G chrX:48980199-48980279 15 1.09e-04 TAAGGGGCCG TGGGAAGT AATTGTCGCT chr22:39886319-39886399 59 1.09e-04 ctagggaacc tgggaagt gtagtcttca chr19:44598415-44598495 1 1.09e-04 . TGGGAAGT GTAGTCCAGA chr19:41084515-41084595 39 1.28e-04 TGAGATACAG TGGGAGGT GTAGTTCCCT chr19:49017221-49017301 28 1.28e-04 CAGAGGCTTA TGGGAGGT GTAGTCCTGG chr19:58838285-58838365 67 1.42e-04 CGGAGGACGC CGGGAATT GTAGTC chr2:136288409-136288489 65 1.56e-04 AAAAGCATGT TGGGAATC GTAGTCCG chr2:86332688-86332768 67 1.56e-04 AAAGCGCTTC TGGGAATC GTAGTT chr1:156052280-156052360 49 2.17e-04 cggggcATGC CGGGAGTT GTAGTTTCCC chr18:9913578-9913658 68 2.17e-04 GGGGGCATGC CGGGAGTT GTAGT chr3:69788447-69788527 62 2.17e-04 CCAGGCGAGC TGGGAATG CCCCGCCCGG chr12:110151311-11015139 70 2.17e-04 CGCAGCATGC CGGGAGTT GCA chr16:30908459-30908539 56 2.17e-04 CTGTGCGTTT CGGGAAAT GGAGTCCCTC chr19:52097740-52097820 55 2.58e-04 CAGGGGCACC TGGGAGTC GTAGGCGGAT chr1:31327130-31327210 61 2.58e-04 caaagcacgc tgggaaac gtagtctttc chr14:82000454-82000534 65 2.58e-04 GGGGTGCTCT TGGGAAAC GTAGTCCA chr19:49362011-49362091 67 2.58e-04 TGAGGCCTGA TGGGAAAC GTAGTC chr16:31045650-31045730 44 2.91e-04 CCAGGGATTG TGGGGGTT GTAGTTCCAC chr1:234812121-234812201 26 2.91e-04 cagtgcatgc tgggggtt gtagttctcg chr16:58664412-58664492 62 2.91e-04 CAGTGCATGC TGGGGGTT GTAGTCACCC chr1:247095514-247095594 67 3.45e-04 cgTGCGCAGT TGGGAGTG GTAGTC chr9:132079961-132080041 31 3.45e-04 cccttgcagc tgggagtg gtcacatgac chr19:36208416-36208496 56 3.45e-04 CGCGGCACCC TGGGAGTG GTAGTCCACG chr9:138853253-138853333 13 3.45e-04 TGGCGCATGC CGGGAGAT GTGGTTCTCG chr4:79575005-79575085 52 3.89e-04 caggggtgac taggaaat gtagtttttg chr1:243418776-243418856 72 3.89e-04 CTGGGCATGC TAGGAGTT G chr13:31736508-31736588 31 4.36e-04 CCTTGCATGC TGGGATGT GTAGTCCTGG chr12:88535958-88536038 71 4.36e-04 TTCTGCATGC TGGGAACT GA chr16:84300112-84300192 66 4.36e-04 ttgtggccaa tgggatgt tagtgga chr20:40322142-40322222 45 4.36e-04 GCTGCGCATA TGGGGGAT CCATTTTACC chr7:150689947-150690027 71 4.36e-04 ACCTGCATTC TGGGAACT GT chr8:67525733-67525813 49 4.56e-04 CGGGGCCTGC TGGGAGAG CGAGTTCCTG chr19:49224354-49224434 68 4.84e-04 CTGGGCATGA TGGAAGTT GTAGT chr6:41703385-41703465 73 5.36e-04 CTAGGCACGC CGGGATTT chr10:103892664-10389274 52 5.59e-04 CACGGCTCTC TGGGATTC GTAGTCTTGC chr16:74729864-74729944 65 5.80e-04 ttctcaccaa tggggttt aagtgcat chr1:17338459-17338539 40 6.26e-04 CCGGGGCTGC CGGGACTT GTAGTCCCCG chr1:47799901-47799981 59 6.26e-04 cgcggcgTGC CGGGACTT GTAGTCCGCG chr13:26827953-26828033 70 6.75e-04 CTGTGCATTC TGGGTATT GTA chr19:50836831-50836911 72 6.75e-04 AGGGCCTTCA TGGGACTC G chr16:67700644-67700724 65 7.35e-04 CAAAGCGTCC TGGGGCTT GTAGTTTC chr19:49404473-49404553 55 7.35e-04 GTTGGCTAGC TGGGGTAT TCTGACTTCA chr19:55708326-55708406 71 8.54e-04 TGTGGCCTGA TGGAATTT GT chr1:22755262-22755342 71 8.54e-04 ttctggccaa taggatat aa chr5:153211681-153211761 68 9.21e-04 gtttagccaa tgagagat gagca chr11:134123334-13412341 64 9.41e-04 CAGGGTGCAG TGGGACAG GCGTTGCCG chr5:131526030-131526110 70 1.02e-03 aagccactag agggagat tag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:66138872-66138952 9.8e-06 58_[+2]_14 chr6:15245641-15245721 9.8e-06 35_[+2]_37 chr1:243419203-243419283 9.8e-06 8_[+2]_64 chr6:31866308-31866388 9.8e-06 71_[+2]_1 chr19:54396426-54396506 9.8e-06 70_[+2]_2 chr7:102389313-102389393 3.4e-05 25_[+2]_47 chr17:76250656-76250736 3.4e-05 72_[+2] chr20:62694375-62694455 3.4e-05 55_[+2]_17 chr2:99952928-99953008 3.4e-05 65_[+2]_7 chr16:9147099-9147179 3.4e-05 56_[+2]_16 chr19:49835010-49835090 3.4e-05 54_[+2]_18 chr17:17653421-17653501 3.4e-05 55_[+2]_17 chr17:21226434-21226514 3.4e-05 61_[+2]_11 chr12:49449932-49450012 3.4e-05 24_[+2]_48 chr10:71754201-71754281 3.4e-05 60_[+2]_12 chr17:38083866-38083946 3.4e-05 46_[+2]_26 chr1:156308547-156308627 3.4e-05 72_[+2] chr1:15288457-15288537 3.4e-05 57_[+2]_15 chr20:48732481-48732561 3.4e-05 64_[+2]_8 chr21:35402523-35402603 3.4e-05 44_[+2]_28 chr14:81408123-81408203 3.4e-05 12_[+2]_60 chr12:121488680-12148876 3.4e-05 60_[+2]_12 chr21:15755514-15755594 3.4e-05 9_[+2]_63 chr20:45810098-45810178 3.4e-05 59_[+2]_13 chr4:2420551-2420631 3.4e-05 72_[+2] chr20:49116086-49116166 3.4e-05 51_[+2]_21 chr17:4634602-4634682 3.4e-05 10_[+2]_62 chr6:33783805-33783885 3.4e-05 59_[+2]_13 chr2:10552683-10552763 3.4e-05 55_[+2]_17 chr9:134955269-134955349 3.4e-05 46_[+2]_26 chr15:76461555-76461635 3.4e-05 46_[+2]_26 chr19:6812068-6812148 3.4e-05 48_[+2]_24 chr19:47049933-47050013 3.4e-05 51_[+2]_21 chr1:155113005-155113085 3.4e-05 51_[+2]_21 chr6:44101535-44101615 3.4e-05 37_[+2]_35 chr20:52535657-52535737 3.4e-05 68_[+2]_4 chr10:38383176-38383256 3.4e-05 39_[+2]_33 chr13:41837989-41838069 3.4e-05 22_[+2]_50 chr21:35340754-35340834 3.4e-05 56_[+2]_16 chr6:6890948-6891028 3.4e-05 62_[+2]_10 chr1:18779222-18779302 3.4e-05 58_[+2]_14 chr10:73083337-73083417 3.4e-05 50_[+2]_22 chr20:45779474-45779554 3.4e-05 64_[+2]_8 chr1:20767411-20767491 3.4e-05 64_[+2]_8 chr4:7075465-7075545 3.4e-05 57_[+2]_15 chr16:29687592-29687672 3.4e-05 39_[+2]_33 chr1:205744604-205744684 3.4e-05 72_[+2] chr10:72288716-72288796 3.4e-05 42_[+2]_30 chr19:42463532-42463612 3.4e-05 59_[+2]_13 chr5:178157717-178157797 3.4e-05 20_[+2]_52 chr19:45988712-45988792 3.4e-05 71_[+2]_1 chr6:43215026-43215106 3.4e-05 57_[+2]_15 chr9:131965178-131965258 3.4e-05 65_[+2]_7 chr17:77702489-77702569 3.4e-05 60_[+2]_12 chr9:72435530-72435610 3.4e-05 68_[+2]_4 chr19:50163163-50163243 3.4e-05 62_[+2]_10 chr14:24701754-24701834 3.4e-05 65_[+2]_7 chr16:33569512-33569592 3.4e-05 60_[+2]_12 chr19:7616357-7616437 3.4e-05 55_[+2]_17 chr19:49479589-49479669 3.4e-05 70_[+2]_2 chr17:7118414-7118494 3.4e-05 68_[+2]_4 chr11:919198-919278 3.4e-05 60_[+2]_12 chr19:49148180-49148260 3.4e-05 72_[+2] chr19:507893-507973 3.4e-05 59_[+2]_13 chr19:55690510-55690590 3.4e-05 65_[+2]_7 chr19:51142563-51142643 3.4e-05 64_[+2]_8 chr19:49228256-49228336 3.4e-05 63_[+2]_9 chr19:49248612-49248692 3.4e-05 66_[+2]_6 chr19:55815809-55815889 3.4e-05 62_[+2]_10 chr19:49013936-49014016 3.4e-05 66_[+2]_6 chr17:7094940-7095020 3.4e-05 64_[+2]_8 chr19:54411496-54411576 3.4e-05 59_[+2]_13 chr19:54480863-54480943 3.4e-05 68_[+2]_4 chr1:154979441-154979521 3.4e-05 52_[+2]_20 chr19:49486854-49486934 3.4e-05 66_[+2]_6 chr19:55831280-55831360 3.4e-05 67_[+2]_5 chr19:49416528-49416608 3.4e-05 69_[+2]_3 chr9:101172675-101172755 4.8e-05 69_[+2]_3 chr19:49947081-49947161 4.8e-05 49_[+2]_23 chr19:49262478-49262558 4.8e-05 69_[+2]_3 chr2:27319257-27319337 4.8e-05 52_[+2]_20 chr19:48907010-48907090 4.8e-05 19_[+2]_53 chr19:49385137-49385217 4.8e-05 72_[+2] chr19:54682365-54682445 4.8e-05 66_[+2]_6 chr8:145159789-145159869 5.7e-05 54_[+2]_18 chr3:50388511-50388591 5.7e-05 65_[+2]_7 chr10:104262615-10426269 5.7e-05 21_[+2]_51 chr16:58426723-58426803 5.7e-05 61_[+2]_11 chr19:55816992-55817072 5.7e-05 69_[+2]_3 chr19:55709049-55709129 5.7e-05 72_[+2] chr18:60382251-60382331 8.1e-05 25_[+2]_47 chr17:40075335-40075415 8.1e-05 53_[+2]_19 chr19:14743255-14743335 8.1e-05 55_[+2]_17 chr6:6737557-6737637 8.1e-05 42_[+2]_30 chr2:54950535-54950615 8.1e-05 10_[+2]_62 chr16:46918130-46918210 8.1e-05 13_[+2]_59 chr16:68482588-68482668 8.1e-05 25_[+2]_47 chr8:82755020-82755100 8.1e-05 64_[+2]_8 chr17:40559668-40559748 8.1e-05 60_[+2]_12 chr11:46134684-46134764 8.1e-05 62_[+2]_10 chr19:49310026-49310106 9.4e-05 70_[+2]_2 chr16:15150037-15150117 0.00011 71_[+2]_1 chrX:48980199-48980279 0.00011 14_[+2]_58 chr22:39886319-39886399 0.00011 58_[+2]_14 chr19:44598415-44598495 0.00011 [+2]_72 chr19:41084515-41084595 0.00013 38_[+2]_34 chr19:49017221-49017301 0.00013 27_[+2]_45 chr19:58838285-58838365 0.00014 66_[+2]_6 chr2:136288409-136288489 0.00016 64_[+2]_8 chr2:86332688-86332768 0.00016 66_[+2]_6 chr1:156052280-156052360 0.00022 48_[+2]_24 chr18:9913578-9913658 0.00022 67_[+2]_5 chr3:69788447-69788527 0.00022 61_[+2]_11 chr12:110151311-11015139 0.00022 69_[+2]_3 chr16:30908459-30908539 0.00022 55_[+2]_17 chr19:52097740-52097820 0.00026 54_[+2]_18 chr1:31327130-31327210 0.00026 60_[+2]_12 chr14:82000454-82000534 0.00026 64_[+2]_8 chr19:49362011-49362091 0.00026 66_[+2]_6 chr16:31045650-31045730 0.00029 43_[+2]_29 chr1:234812121-234812201 0.00029 25_[+2]_47 chr16:58664412-58664492 0.00029 61_[+2]_11 chr1:247095514-247095594 0.00034 66_[+2]_6 chr9:132079961-132080041 0.00034 30_[+2]_42 chr19:36208416-36208496 0.00034 55_[+2]_17 chr9:138853253-138853333 0.00034 12_[+2]_60 chr4:79575005-79575085 0.00039 51_[+2]_21 chr1:243418776-243418856 0.00039 71_[+2]_1 chr13:31736508-31736588 0.00044 30_[+2]_42 chr12:88535958-88536038 0.00044 70_[+2]_2 chr16:84300112-84300192 0.00044 65_[+2]_7 chr20:40322142-40322222 0.00044 44_[+2]_28 chr7:150689947-150690027 0.00044 70_[+2]_2 chr8:67525733-67525813 0.00046 48_[+2]_24 chr19:49224354-49224434 0.00048 67_[+2]_5 chr6:41703385-41703465 0.00054 72_[+2] chr10:103892664-10389274 0.00056 51_[+2]_21 chr16:74729864-74729944 0.00058 64_[+2]_8 chr1:17338459-17338539 0.00063 39_[+2]_33 chr1:47799901-47799981 0.00063 58_[+2]_14 chr13:26827953-26828033 0.00068 69_[+2]_3 chr19:50836831-50836911 0.00068 71_[+2]_1 chr16:67700644-67700724 0.00073 64_[+2]_8 chr19:49404473-49404553 0.00073 54_[+2]_18 chr19:55708326-55708406 0.00085 70_[+2]_2 chr1:22755262-22755342 0.00085 70_[+2]_2 chr5:153211681-153211761 0.00092 67_[+2]_5 chr11:134123334-13412341 0.00094 63_[+2]_9 chr5:131526030-131526110 0.001 69_[+2]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGGGARWT width=8 seqs=149 chr11:66138872-66138952 ( 59) TGGGAATT 1 chr6:15245641-15245721 ( 36) TGGGAATT 1 chr1:243419203-243419283 ( 9) TGGGAATT 1 chr6:31866308-31866388 ( 72) TGGGAATT 1 chr19:54396426-54396506 ( 71) TGGGAATT 1 chr7:102389313-102389393 ( 26) TGGGAAAT 1 chr17:76250656-76250736 ( 73) TGGGAGTT 1 chr20:62694375-62694455 ( 56) TGGGAGTT 1 chr2:99952928-99953008 ( 66) TGGGAGTT 1 chr16:9147099-9147179 ( 57) TGGGAAAT 1 chr19:49835010-49835090 ( 55) TGGGAAAT 1 chr17:17653421-17653501 ( 56) TGGGAAAT 1 chr17:21226434-21226514 ( 62) TGGGAAAT 1 chr12:49449932-49450012 ( 25) TGGGAGTT 1 chr10:71754201-71754281 ( 61) TGGGAAAT 1 chr17:38083866-38083946 ( 47) TGGGAGTT 1 chr1:156308547-156308627 ( 73) TGGGAGTT 1 chr1:15288457-15288537 ( 58) TGGGAAAT 1 chr20:48732481-48732561 ( 65) TGGGAGTT 1 chr21:35402523-35402603 ( 45) TGGGAAAT 1 chr14:81408123-81408203 ( 13) TGGGAGTT 1 chr12:121488680-12148876 ( 61) TGGGAAAT 1 chr21:15755514-15755594 ( 10) TGGGAAAT 1 chr20:45810098-45810178 ( 60) TGGGAAAT 1 chr4:2420551-2420631 ( 73) TGGGAGTT 1 chr20:49116086-49116166 ( 52) TGGGAAAT 1 chr17:4634602-4634682 ( 11) TGGGAGTT 1 chr6:33783805-33783885 ( 60) TGGGAAAT 1 chr2:10552683-10552763 ( 56) TGGGAAAT 1 chr9:134955269-134955349 ( 47) TGGGAAAT 1 chr15:76461555-76461635 ( 47) TGGGAAAT 1 chr19:6812068-6812148 ( 49) TGGGAAAT 1 chr19:47049933-47050013 ( 52) TGGGAAAT 1 chr1:155113005-155113085 ( 52) TGGGAGTT 1 chr6:44101535-44101615 ( 38) TGGGAGTT 1 chr20:52535657-52535737 ( 69) TGGGAAAT 1 chr10:38383176-38383256 ( 40) TGGGAAAT 1 chr13:41837989-41838069 ( 23) TGGGAGTT 1 chr21:35340754-35340834 ( 57) TGGGAAAT 1 chr6:6890948-6891028 ( 63) TGGGAAAT 1 chr1:18779222-18779302 ( 59) TGGGAAAT 1 chr10:73083337-73083417 ( 51) TGGGAAAT 1 chr20:45779474-45779554 ( 65) TGGGAAAT 1 chr1:20767411-20767491 ( 65) TGGGAAAT 1 chr4:7075465-7075545 ( 58) TGGGAAAT 1 chr16:29687592-29687672 ( 40) TGGGAAAT 1 chr1:205744604-205744684 ( 73) TGGGAAAT 1 chr10:72288716-72288796 ( 43) TGGGAAAT 1 chr19:42463532-42463612 ( 60) TGGGAGTT 1 chr5:178157717-178157797 ( 21) TGGGAAAT 1 chr19:45988712-45988792 ( 72) TGGGAAAT 1 chr6:43215026-43215106 ( 58) TGGGAGTT 1 chr9:131965178-131965258 ( 66) TGGGAGTT 1 chr17:77702489-77702569 ( 61) TGGGAAAT 1 chr9:72435530-72435610 ( 69) TGGGAAAT 1 chr19:50163163-50163243 ( 63) TGGGAGTT 1 chr14:24701754-24701834 ( 66) TGGGAGTT 1 chr16:33569512-33569592 ( 61) TGGGAAAT 1 chr19:7616357-7616437 ( 56) TGGGAAAT 1 chr19:49479589-49479669 ( 71) TGGGAGTT 1 chr17:7118414-7118494 ( 69) TGGGAGTT 1 chr11:919198-919278 ( 61) TGGGAAAT 1 chr19:49148180-49148260 ( 73) TGGGAGTT 1 chr19:507893-507973 ( 60) TGGGAGTT 1 chr19:55690510-55690590 ( 66) TGGGAGTT 1 chr19:51142563-51142643 ( 65) TGGGAGTT 1 chr19:49228256-49228336 ( 64) TGGGAGTT 1 chr19:49248612-49248692 ( 67) TGGGAGTT 1 chr19:55815809-55815889 ( 63) TGGGAGTT 1 chr19:49013936-49014016 ( 67) TGGGAGTT 1 chr17:7094940-7095020 ( 65) TGGGAAAT 1 chr19:54411496-54411576 ( 60) TGGGAAAT 1 chr19:54480863-54480943 ( 69) TGGGAAAT 1 chr1:154979441-154979521 ( 53) TGGGAGTT 1 chr19:49486854-49486934 ( 67) TGGGAGTT 1 chr19:55831280-55831360 ( 68) TGGGAGTT 1 chr19:49416528-49416608 ( 70) TGGGAGTT 1 chr9:101172675-101172755 ( 70) TGGGAGAT 1 chr19:49947081-49947161 ( 50) TGGGAGAT 1 chr19:49262478-49262558 ( 70) TGGGAGAT 1 chr2:27319257-27319337 ( 53) TGGGAGAT 1 chr19:48907010-48907090 ( 20) TGGGAGAT 1 chr19:49385137-49385217 ( 73) TGGGAGAT 1 chr19:54682365-54682445 ( 67) TGGGAGAT 1 chr8:145159789-145159869 ( 55) TGGGATTT 1 chr3:50388511-50388591 ( 66) TGGGATTT 1 chr10:104262615-10426269 ( 22) TGGGATTT 1 chr16:58426723-58426803 ( 62) TGGGATTT 1 chr19:55816992-55817072 ( 70) TGGGATTT 1 chr19:55709049-55709129 ( 73) TGGGATTT 1 chr18:60382251-60382331 ( 26) TGGGACTT 1 chr17:40075335-40075415 ( 54) TGGGACTT 1 chr19:14743255-14743335 ( 56) TGGGATAT 1 chr6:6737557-6737637 ( 43) TGGGACTT 1 chr2:54950535-54950615 ( 11) TGGGACTT 1 chr16:46918130-46918210 ( 14) TGGGACTT 1 chr16:68482588-68482668 ( 26) TGGGACTT 1 chr8:82755020-82755100 ( 65) TGGGACTT 1 chr17:40559668-40559748 ( 61) TGGGACTT 1 chr11:46134684-46134764 ( 63) TGGGACTT 1 chr19:49310026-49310106 ( 71) TGGGACAT 1 chr16:15150037-15150117 ( 72) TGGGAAGT 1 chrX:48980199-48980279 ( 15) TGGGAAGT 1 chr22:39886319-39886399 ( 59) TGGGAAGT 1 chr19:44598415-44598495 ( 1) TGGGAAGT 1 chr19:41084515-41084595 ( 39) TGGGAGGT 1 chr19:49017221-49017301 ( 28) TGGGAGGT 1 chr19:58838285-58838365 ( 67) CGGGAATT 1 chr2:136288409-136288489 ( 65) TGGGAATC 1 chr2:86332688-86332768 ( 67) TGGGAATC 1 chr1:156052280-156052360 ( 49) CGGGAGTT 1 chr18:9913578-9913658 ( 68) CGGGAGTT 1 chr3:69788447-69788527 ( 62) TGGGAATG 1 chr12:110151311-11015139 ( 70) CGGGAGTT 1 chr16:30908459-30908539 ( 56) CGGGAAAT 1 chr19:52097740-52097820 ( 55) TGGGAGTC 1 chr1:31327130-31327210 ( 61) TGGGAAAC 1 chr14:82000454-82000534 ( 65) TGGGAAAC 1 chr19:49362011-49362091 ( 67) TGGGAAAC 1 chr16:31045650-31045730 ( 44) TGGGGGTT 1 chr1:234812121-234812201 ( 26) TGGGGGTT 1 chr16:58664412-58664492 ( 62) TGGGGGTT 1 chr1:247095514-247095594 ( 67) TGGGAGTG 1 chr9:132079961-132080041 ( 31) TGGGAGTG 1 chr19:36208416-36208496 ( 56) TGGGAGTG 1 chr9:138853253-138853333 ( 13) CGGGAGAT 1 chr4:79575005-79575085 ( 52) TAGGAAAT 1 chr1:243418776-243418856 ( 72) TAGGAGTT 1 chr13:31736508-31736588 ( 31) TGGGATGT 1 chr12:88535958-88536038 ( 71) TGGGAACT 1 chr16:84300112-84300192 ( 66) TGGGATGT 1 chr20:40322142-40322222 ( 45) TGGGGGAT 1 chr7:150689947-150690027 ( 71) TGGGAACT 1 chr8:67525733-67525813 ( 49) TGGGAGAG 1 chr19:49224354-49224434 ( 68) TGGAAGTT 1 chr6:41703385-41703465 ( 73) CGGGATTT 1 chr10:103892664-10389274 ( 52) TGGGATTC 1 chr16:74729864-74729944 ( 65) TGGGGTTT 1 chr1:17338459-17338539 ( 40) CGGGACTT 1 chr1:47799901-47799981 ( 59) CGGGACTT 1 chr13:26827953-26828033 ( 70) TGGGTATT 1 chr19:50836831-50836911 ( 72) TGGGACTC 1 chr16:67700644-67700724 ( 65) TGGGGCTT 1 chr19:49404473-49404553 ( 55) TGGGGTAT 1 chr19:55708326-55708406 ( 71) TGGAATTT 1 chr1:22755262-22755342 ( 71) TAGGATAT 1 chr5:153211681-153211761 ( 68) TGAGAGAT 1 chr11:134123334-13412341 ( 64) TGGGACAG 1 chr5:131526030-131526110 ( 70) AGGGAGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.09854 E= 1.6e-150 -498 -226 -1386 218 -340 -1386 174 -1386 -498 -1386 176 -1386 -398 -1386 175 -1386 216 -1386 -264 -493 95 -152 41 -103 97 -443 -245 133 -1386 -243 -287 214 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 149 E= 1.6e-150 0.006711 0.060403 0.000000 0.932886 0.020134 0.000000 0.979866 0.000000 0.006711 0.000000 0.993289 0.000000 0.013423 0.000000 0.986577 0.000000 0.946309 0.000000 0.046980 0.006711 0.409396 0.100671 0.389262 0.100671 0.416107 0.013423 0.053691 0.516779 0.000000 0.053691 0.040268 0.906040 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGGGARWT MEME-2 regular expression -------------------------------------------------------------------------------- TGGGA[AG][TA]T -------------------------------------------------------------------------------- Time 8.05 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCCAGSA MEME-3 width = 8 sites = 156 llr = 1127 E-value = 4.7e-105 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1:::9127 pos.-specific C 1aaa::51 probability G ::::1831 matrix T 8::::1:1 bits 2.3 2.1 1.8 **** 1.6 **** Relative 1.4 ***** Entropy 1.1 ***** (10.4 bits) 0.9 ****** 0.7 ****** * 0.5 ****** * 0.2 ******** 0.0 -------- Multilevel TCCCAGCA consensus G sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:4180275-4180355 19 1.89e-05 agactacatt tcccagca acccttgcag chr4:6374774-6374854 32 1.89e-05 ggactacatt tcccagca gcctttgtgc chr5:153211681-153211761 24 1.89e-05 ggactacatt tcccagca gcccttagat chr3:13933300-13933380 36 1.89e-05 aaactacatc tcccagca tcctttgcag chr22:33300165-33300245 20 1.89e-05 ggactacatt tcccagca ggccttgtgg chr14:68286393-68286473 14 1.89e-05 TAACTACAAT TCCCAGCA AGCCGCGGAG chr11:64456045-64456125 48 1.89e-05 GAACTACAAC TCCCAGCA GCGCTTGCAC chr12:32832073-32832153 26 1.89e-05 GAACTACAAC TCCCAGCA GGCCTTGCTC chr19:58838285-58838365 20 1.89e-05 CAACTACAAT TCCCAGCA GGCACCGCGC chr17:46908255-46908335 37 1.89e-05 ACACTACAAG TCCCAGCA AGCGCCGCGC chr2:86332688-86332768 4 1.89e-05 GGC TCCCAGCA GGACAAGCGC chr19:19887278-19887358 47 1.89e-05 AGACTACAAC TCCCAGCA TACCAGGCGC chr19:17721334-17721414 14 1.89e-05 agactacatt tcccagca ttgccatgaa chr22:22020217-22020297 36 1.89e-05 GAACCACAAT TCCCAGCA CGCCAGGCGC chr1:224544442-224544522 4 1.89e-05 AAT TCCCAGCA TGCGTCAGAA chr9:132346484-132346564 19 1.89e-05 aaactacatt tcccagca tcccttgctg chr2:232646292-232646372 16 1.89e-05 AGACTACATT TCCCAGCA TTCCAGCGGC chr16:53468290-53468370 14 1.89e-05 GGACTACGTT TCCCAGCA GCCCGTGCTC chr19:45988712-45988792 11 1.89e-05 CAACTACAAG TCCCAGCA GGCCCCGCGG chr8:124054105-124054185 3 1.89e-05 AA TCCCAGCA GGCACCGCGC chr1:22755262-22755342 24 1.89e-05 agactacatt tcccagca taccttgcag chr19:49148180-49148260 12 1.89e-05 GAACTACAAC TCCCAGCA GGCCCCAGTG chr17:40559668-40559748 25 1.89e-05 CAACTACACC TCCCAGCA GGCAAGGTGA chr11:46134684-46134764 11 1.89e-05 CAACTACAGG TCCCAGCA TGCAGTGCTC chr19:55816992-55817072 11 1.89e-05 GAACTACAAG TCCCAGCA GCCCCTGGGG chr19:48922673-48922753 9 1.89e-05 ACTACATT TCCCAGCA GCCCCTGGAG chr7:152887689-152887769 21 3.28e-05 ggactacatc tcccagaa tcccttgcag chr9:101172675-101172755 25 3.28e-05 aaactacatt tcccagaa tcgcctgcca chr10:38265598-38265678 26 3.28e-05 GAACTACGCT TCCCAGAA GGCCCGGCTG chr19:49223922-49224002 47 3.28e-05 GAACTACAAC TCCCAGAA AGCTTTGCGC chr5:178286879-178286959 27 3.28e-05 GAACTACACT TCCCAGAA AGCCAGCGTC chr19:44809190-44809270 71 3.28e-05 GGACTACAGT TCCCAGAA TG chr2:217277069-217277149 29 3.28e-05 GAACTACAAA TCCCAGAA GACACTGCAG chr14:82000454-82000534 24 3.28e-05 AGACTACAAT TCCCAGAA TGCGCTTCAT chr19:51963844-51963924 23 3.28e-05 gaactacaat tcccagaa tccccttccc chr19:49479589-49479669 13 3.28e-05 GAACTCTAAC TCCCAGAA GCCTCTGGAC chr19:46027160-46027240 14 3.28e-05 GAACTACAAA TCCCAGAA TACTCTGTTC chr17:7358812-7358892 13 3.28e-05 GAACTACAGT TCCCAGAA GAGTGTGCGG chr8:82755020-82755100 15 3.28e-05 AGACTACAAT TCCCAGAA GGAACTGCGA chr19:54382692-54382772 72 3.28e-05 GGACTACCAG TCCCAGAA T chr19:50651539-50651619 12 3.28e-05 GGACTACATT TCCCAGAA ACCATTGAGG chr19:54396426-54396506 9 3.28e-05 ACTACAGT TCCCAGAA GACCCTAGGA chr20:62694375-62694455 25 5.20e-05 GGACTACACT TCCCAGGA GGCTGTGCGC chr2:54950535-54950615 71 5.20e-05 GGACTACACT TCCCAGGA TG chr7:76751692-76751772 64 5.20e-05 AAACCACATA TCCCAGGA GGCAATGCG chr3:50397061-50397141 27 5.20e-05 GAACTACAAG TCCCAGGA GGCCATGAGC chr16:31119649-31119729 23 5.20e-05 AAACTACAAC TCCCAGGA CCCAGCGGGC chr12:56710133-56710213 13 5.20e-05 AAACTACATC TCCCAGGA AGCACCGCAG chr19:48866427-48866507 15 5.20e-05 GAACTACAAC TCCCAGGA GGCGCCAGGG chr3:61235753-61235833 61 5.20e-05 AGACTTCGTC TCCCAGGA GACATCTCGC chr19:40697262-40697342 38 5.20e-05 AGACTACAAC TCCCAGGA GGCACCGCGG chr9:72435530-72435610 7 5.20e-05 TGCGGA TCCCAGGA TGCAGTTCCC chr19:49422139-49422219 42 5.20e-05 CAAAAACGGC TCCCAGGA GTGGTAGCGT chr6:10147338-10147418 49 5.20e-05 ggactacacc tcccagga tgcaatgcat chr19:49228256-49228336 4 5.20e-05 AAC TCCCAGGA AGCTTCAGGG chr19:55831280-55831360 6 5.20e-05 ACAAG TCCCAGGA GGGCCGGGCG chr2:88844831-88844911 57 9.09e-05 tgtgactaga tcccagcc aatgggccat chr19:14743255-14743335 6 9.09e-05 acatt tcccagcc tcccttgcag chr9:132079961-132080041 12 9.09e-05 ggactgcatt tcccagcc tcccttgcag chr9:133003018-133003098 16 9.09e-05 ggactacatt tcccagcc tcccttgtgg chr12:119667748-11966782 32 9.09e-05 Ggactacatt tcccagcc tcccctgggg chr19:13512344-13512424 21 9.09e-05 agactacatt tcccagcc tcccatgcag chr6:41703385-41703465 7 9.09e-05 CCCGCC TCCCAGCC GCTCTGCCTC chr16:74729864-74729944 15 9.09e-05 gaactacatc tcccagcc ttccttgcaa chr16:84300112-84300192 15 9.09e-05 agactacatt tcccagcc tcccttgcaa chr19:47942188-47942268 50 9.09e-05 gaactacatt tcccagcc tcccttgcag chr20:750599-750679 12 9.09e-05 ggactacatt tcccagcc ttctttgtag chr20:49084694-49084774 19 9.09e-05 agactacatt tcccagcc tcccttgcag chr17:19912578-19912658 13 1.17e-04 GTACTACATC TCCCAGCG AGCCCCGCGC chr1:243418776-243418856 20 1.17e-04 GGACTACAGT TCCCAGCG GGCAGAGCGC chr19:50501074-50501154 16 2.04e-04 aaactacgtt tcccagct tcctttgcag chr8:145159789-145159869 23 2.04e-04 GAACCACAGC CCCCAGCA GGCCTCGCGC chr11:107436426-10743650 46 2.04e-04 GCACTACATT TCCCATGA GCCCGCGGGA chr16:87009105-87009185 26 2.04e-04 aaactacatc ccccagca tcctttgcag chr8:140688118-140688198 18 2.04e-04 aaactacatt tcccagac tcctttgcac chr3:50388511-50388591 26 2.04e-04 CTCCGCGCCC TCCCAGCT GGCTCTACTG chr6:15245641-15245721 49 2.04e-04 GAATTGTAGT TCCCAGCT TCCGTGGCCA chr2:44001101-44001181 18 2.04e-04 AAACTACATT TCCCATGA TGCCCGTCTC chr19:51152938-51153018 64 2.04e-04 GAACTACATT TCCCATGA GCCTCTGGG chr19:55708326-55708406 10 2.04e-04 AACTACAAC TCCCATGA GGCCTTGGGC chr1:205744604-205744684 12 2.04e-04 GCACTACATT TCCCAGCT TTCCTCGCGG chr11:69614414-69614494 13 2.04e-04 aaactacatt tcccagac ttccctgcag chr7:150689947-150690027 11 2.04e-04 GAACTACAAA CCCCAGCA TGCACTCTGG chr16:30908459-30908539 23 2.04e-04 GGACTACATT CCCCAGCA CGCATCGGGC chrX:47050071-47050151 7 2.04e-04 TACCAC CCCCAGCA TGCCGCGCGC chr19:49224354-49224434 8 2.04e-04 CTACAAA CCCCAGCA ACTCCTGGGG chr12:104323504-10432358 40 2.04e-04 AGACTACGAC CCCCAGCA TTCAATGCAG chr15:63481580-63481660 29 2.04e-04 GAACTACAAG TCCCATGA AGTCCCGGGG chr7:1465366-1465446 15 2.04e-04 gaactacatt ccccagca tcccttgcag chr19:55690510-55690590 6 2.04e-04 CCAAC TCCCATGA GGCCTTTGCG chr19:54480863-54480943 9 2.04e-04 ACTACAAC TCCCATGA TCCACTGCGG chr19:55709049-55709129 10 2.04e-04 AACTACAGT TCCCATGA GGCTATGGAT chr19:54682365-54682445 5 2.04e-04 caat tcccatgA GCCTCCGGGG chr19:49310026-49310106 10 2.04e-04 AACTACAAC TCCCATGA AGCCCTGGGC chr14:73493967-73494047 31 2.57e-04 TGACTACAAC TCCCAGTA CTGAAGAGGC chr12:124594394-12459447 26 2.57e-04 aaactacatt tcccaggc tcccttgtgc chr2:36845625-36845705 28 2.57e-04 ggactacatt tcccaggc acccttgcag chr3:14361228-14361308 29 2.57e-04 ggactacatt tcccaggc tcctctgcag chr6:14800251-14800331 34 2.57e-04 agactacatt tcccaggc tcccttgcag chr2:38892990-38893070 40 2.57e-04 AAACTACCAT TCCCAACA TGCAATGCAA chr19:4304532-4304612 34 2.57e-04 GAACTACATT TCCCAGGC GGCCGCGGCG chr19:55677437-55677517 16 2.57e-04 GGACTACAAA TCCCAGTA GGCGTTCCGC chr17:7118414-7118494 7 2.57e-04 CACAAC TCCCAACA GCGCCATGGG chr19:49404473-49404553 4 2.57e-04 ATT TCCCAGTA GCACCATGTT chr17:7094940-7095020 10 2.57e-04 GACTCCAAT TCCCAACA GCCCTAGAGG chr19:37569243-37569323 7 2.76e-04 TACATT TCCCAGAG GCACGGCGTC chr11:73661963-73662043 47 2.76e-04 GGACTACAAC TCCCAGAG TGCACCTGTG chr12:88535958-88536038 35 2.76e-04 GGACTTCAAA TCCCAGAG TGCAGTTCTG chr6:52929627-52929707 11 2.76e-04 CGACTACAAA TCCCAGAG TGCCTCGCGG chr19:36208416-36208496 13 3.03e-04 GAACTGCATT TCCCAGGG CCTCGGGGGT chr19:49416528-49416608 8 3.03e-04 CTACAAT TCCCAGGG GCCCTTGAGG chr19:1241636-1241716 13 3.36e-04 AAACTGCAAC CCCCAGAA TACCTCACGA chr15:76461555-76461635 28 3.36e-04 acaaggccac tcccagat gcaaggaggg chr19:10028075-10028155 18 3.36e-04 aaactacatt tcccagat tccattgcat chr5:131526030-131526110 13 3.36e-04 aaactacatt tcccagat tcccttatca chr2:2617313-2617393 16 4.11e-04 aaactacaat ccccagga tgcactgcac chr20:25677517-25677597 24 4.11e-04 GGACTACGCT ACCCAGCA TCCTCGGCGC chr13:41768695-41768775 13 4.11e-04 GAACTACTGC TCCCAGGT TGCCTTTCGC chr19:49250485-49250565 13 4.11e-04 AGACTACAAC TCCCAAAA TGCCCTGGGG chr16:30103254-30103334 14 4.51e-04 GAACTACACT TCCCGGCA GGCTCAGCGC chr19:38397741-38397821 48 4.51e-04 CGCCTACGGC TCCCGGCA GCCCCCGCGC chr10:111985587-11198566 52 4.51e-04 GCACTACGAT TCCCGGCA GCCGCGGGCG chr19:51142563-51142643 4 4.51e-04 AAT TCCCGGCA GGTCTCGCGC chr9:134955269-134955349 72 4.66e-04 GCGCGGGGCT ACCCAGAA A chr19:57946550-57946630 54 4.66e-04 GAACTACATT ACCCAGAA GACACTGCGG chr16:29687592-29687672 63 4.66e-04 ttagtagggt acccagaa ggaaaaggga chr12:54582820-54582900 61 5.23e-04 AATGCTCCAA TCCCGGAA GGCGCACTAA chr16:58664412-58664492 1 5.68e-04 . TCCCATCG CAGAAGTAAT chr14:24701754-24701834 28 5.68e-04 GAACTACATC TCCCATCG TGCCAGGAGG chr19:49486854-49486934 7 6.31e-04 TACAAC CCCCATCA GCGCCTAGGG chr19:47049933-47050013 65 6.95e-04 gaaatgtagt ccccagcc aggcagcc chr11:46271172-46271252 8 7.45e-04 ctacatt tcccaacc tcccttgctg chr1:147142675-147142755 51 8.32e-04 AAACTACAAC TCCCACAA GGCTGCGCGT chr10:43048322-43048402 48 8.32e-04 ACGCTACATT TCCCACAA GCCCTCGCGC chr19:50163163-50163243 13 8.32e-04 GGACTACAAC TCCCTGCA GCCCCTGCTG chr11:919198-919278 12 8.32e-04 agATACAATC TCCCTGCA CGTTCTGCTA chr6:167000380-167000460 3 9.12e-04 cc tcccagtg gggactacat chr13:26827953-26828033 4 9.12e-04 CGC TCCCATAT TCCCACCGTG chr12:861520-861600 11 9.12e-04 AAACTACAAC TCCCACGA GGCATTAGGC chr20:45810098-45810178 18 1.01e-03 ttcctgttag ccccagct tagtcacgtg chr3:69788447-69788527 50 1.15e-03 GGGAGCGGCT CCCCAGGC GAGCTGGGAA chr19:41571013-41571093 11 1.22e-03 aaactacatt tcccaagc tcccttgcag chr19:49385137-49385217 12 1.22e-03 AAACTACAAT TCCCAATA GGCTTTGCAA chr11:134123334-13412341 51 1.34e-03 GGACTACAAC CCCCAGGG TGCAGTGGGA chr16:31045650-31045730 32 1.34e-03 GCATGCTCCG CCCCAGGG ATTGTGGGGG chr11:60681311-60681391 20 1.34e-03 GCCCACAATG CCCCAGGG AACATTTGTA chr1:154979441-154979521 18 1.42e-03 GGACTACAAC TCCCAAGG TACATACAAA chr9:130965520-130965600 12 1.52e-03 AAACTACGAC ACCCATGA TGCCCCGGAC chr12:121488680-12148876 42 1.52e-03 acatggtcac acccagct gcaagggagg chr7:20257099-20257179 15 1.52e-03 CAACTAGAAA CCCCAAAA GGCAAGAGAA chr19:49248612-49248692 7 1.52e-03 TACAAT ACCCATGA GGCCACTGGG chr19:49362011-49362091 7 1.52e-03 TACAAT ACCCATGA CACCCAGGGA chr16:19535077-19535157 2 1.65e-03 T TCCCGGCG TGCAGCGTGC chr16:58426723-58426803 11 1.65e-03 AGACTGCAGC TCCCGGCG GGCCCCTCGG chr6:43215026-43215106 7 1.65e-03 TCCATC TCCCGGCG TGCCCTGCTC chr15:79165113-79165193 7 1.65e-03 TACCAG TCCCGGCG TGCCCTgggg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:4180275-4180355 1.9e-05 18_[+3]_54 chr4:6374774-6374854 1.9e-05 31_[+3]_41 chr5:153211681-153211761 1.9e-05 23_[+3]_49 chr3:13933300-13933380 1.9e-05 35_[+3]_37 chr22:33300165-33300245 1.9e-05 19_[+3]_53 chr14:68286393-68286473 1.9e-05 13_[+3]_59 chr11:64456045-64456125 1.9e-05 47_[+3]_25 chr12:32832073-32832153 1.9e-05 25_[+3]_47 chr19:58838285-58838365 1.9e-05 19_[+3]_53 chr17:46908255-46908335 1.9e-05 36_[+3]_36 chr2:86332688-86332768 1.9e-05 3_[+3]_69 chr19:19887278-19887358 1.9e-05 46_[+3]_26 chr19:17721334-17721414 1.9e-05 13_[+3]_59 chr22:22020217-22020297 1.9e-05 35_[+3]_37 chr1:224544442-224544522 1.9e-05 3_[+3]_69 chr9:132346484-132346564 1.9e-05 18_[+3]_54 chr2:232646292-232646372 1.9e-05 15_[+3]_57 chr16:53468290-53468370 1.9e-05 13_[+3]_59 chr19:45988712-45988792 1.9e-05 10_[+3]_62 chr8:124054105-124054185 1.9e-05 2_[+3]_70 chr1:22755262-22755342 1.9e-05 23_[+3]_49 chr19:49148180-49148260 1.9e-05 11_[+3]_61 chr17:40559668-40559748 1.9e-05 24_[+3]_48 chr11:46134684-46134764 1.9e-05 10_[+3]_62 chr19:55816992-55817072 1.9e-05 10_[+3]_62 chr19:48922673-48922753 1.9e-05 8_[+3]_64 chr7:152887689-152887769 3.3e-05 20_[+3]_52 chr9:101172675-101172755 3.3e-05 24_[+3]_48 chr10:38265598-38265678 3.3e-05 25_[+3]_47 chr19:49223922-49224002 3.3e-05 46_[+3]_26 chr5:178286879-178286959 3.3e-05 26_[+3]_46 chr19:44809190-44809270 3.3e-05 70_[+3]_2 chr2:217277069-217277149 3.3e-05 28_[+3]_44 chr14:82000454-82000534 3.3e-05 23_[+3]_49 chr19:51963844-51963924 3.3e-05 22_[+3]_50 chr19:49479589-49479669 3.3e-05 12_[+3]_60 chr19:46027160-46027240 3.3e-05 13_[+3]_59 chr17:7358812-7358892 3.3e-05 12_[+3]_60 chr8:82755020-82755100 3.3e-05 14_[+3]_58 chr19:54382692-54382772 3.3e-05 71_[+3]_1 chr19:50651539-50651619 3.3e-05 11_[+3]_61 chr19:54396426-54396506 3.3e-05 8_[+3]_64 chr20:62694375-62694455 5.2e-05 24_[+3]_48 chr2:54950535-54950615 5.2e-05 70_[+3]_2 chr7:76751692-76751772 5.2e-05 63_[+3]_9 chr3:50397061-50397141 5.2e-05 26_[+3]_46 chr16:31119649-31119729 5.2e-05 22_[+3]_50 chr12:56710133-56710213 5.2e-05 12_[+3]_60 chr19:48866427-48866507 5.2e-05 14_[+3]_58 chr3:61235753-61235833 5.2e-05 60_[+3]_12 chr19:40697262-40697342 5.2e-05 37_[+3]_35 chr9:72435530-72435610 5.2e-05 6_[+3]_66 chr19:49422139-49422219 5.2e-05 41_[+3]_31 chr6:10147338-10147418 5.2e-05 48_[+3]_24 chr19:49228256-49228336 5.2e-05 3_[+3]_69 chr19:55831280-55831360 5.2e-05 5_[+3]_67 chr2:88844831-88844911 9.1e-05 56_[+3]_16 chr19:14743255-14743335 9.1e-05 5_[+3]_67 chr9:132079961-132080041 9.1e-05 11_[+3]_61 chr9:133003018-133003098 9.1e-05 15_[+3]_57 chr12:119667748-11966782 9.1e-05 31_[+3]_41 chr19:13512344-13512424 9.1e-05 20_[+3]_52 chr6:41703385-41703465 9.1e-05 6_[+3]_66 chr16:74729864-74729944 9.1e-05 14_[+3]_58 chr16:84300112-84300192 9.1e-05 14_[+3]_58 chr19:47942188-47942268 9.1e-05 49_[+3]_23 chr20:750599-750679 9.1e-05 11_[+3]_61 chr20:49084694-49084774 9.1e-05 18_[+3]_54 chr17:19912578-19912658 0.00012 12_[+3]_60 chr1:243418776-243418856 0.00012 19_[+3]_53 chr19:50501074-50501154 0.0002 15_[+3]_57 chr8:145159789-145159869 0.0002 22_[+3]_50 chr11:107436426-10743650 0.0002 45_[+3]_27 chr16:87009105-87009185 0.0002 25_[+3]_47 chr8:140688118-140688198 0.0002 17_[+3]_55 chr3:50388511-50388591 0.0002 25_[+3]_47 chr6:15245641-15245721 0.0002 48_[+3]_24 chr2:44001101-44001181 0.0002 17_[+3]_55 chr19:51152938-51153018 0.0002 63_[+3]_9 chr19:55708326-55708406 0.0002 9_[+3]_63 chr1:205744604-205744684 0.0002 11_[+3]_61 chr11:69614414-69614494 0.0002 12_[+3]_60 chr7:150689947-150690027 0.0002 10_[+3]_62 chr16:30908459-30908539 0.0002 22_[+3]_50 chrX:47050071-47050151 0.0002 6_[+3]_66 chr19:49224354-49224434 0.0002 7_[+3]_65 chr12:104323504-10432358 0.0002 39_[+3]_33 chr15:63481580-63481660 0.0002 28_[+3]_44 chr7:1465366-1465446 0.0002 14_[+3]_58 chr19:55690510-55690590 0.0002 5_[+3]_67 chr19:54480863-54480943 0.0002 8_[+3]_64 chr19:55709049-55709129 0.0002 9_[+3]_63 chr19:54682365-54682445 0.0002 4_[+3]_68 chr19:49310026-49310106 0.0002 9_[+3]_63 chr14:73493967-73494047 0.00026 30_[+3]_42 chr12:124594394-12459447 0.00026 25_[+3]_47 chr2:36845625-36845705 0.00026 27_[+3]_45 chr3:14361228-14361308 0.00026 28_[+3]_44 chr6:14800251-14800331 0.00026 33_[+3]_39 chr2:38892990-38893070 0.00026 39_[+3]_33 chr19:4304532-4304612 0.00026 33_[+3]_39 chr19:55677437-55677517 0.00026 15_[+3]_57 chr17:7118414-7118494 0.00026 6_[+3]_66 chr19:49404473-49404553 0.00026 3_[+3]_69 chr17:7094940-7095020 0.00026 9_[+3]_63 chr19:37569243-37569323 0.00028 6_[+3]_66 chr11:73661963-73662043 0.00028 46_[+3]_26 chr12:88535958-88536038 0.00028 34_[+3]_38 chr6:52929627-52929707 0.00028 10_[+3]_62 chr19:36208416-36208496 0.0003 12_[+3]_60 chr19:49416528-49416608 0.0003 7_[+3]_65 chr19:1241636-1241716 0.00034 12_[+3]_60 chr15:76461555-76461635 0.00034 27_[+3]_45 chr19:10028075-10028155 0.00034 17_[+3]_55 chr5:131526030-131526110 0.00034 12_[+3]_60 chr2:2617313-2617393 0.00041 15_[+3]_57 chr20:25677517-25677597 0.00041 23_[+3]_49 chr13:41768695-41768775 0.00041 12_[+3]_60 chr19:49250485-49250565 0.00041 12_[+3]_60 chr16:30103254-30103334 0.00045 13_[+3]_59 chr19:38397741-38397821 0.00045 47_[+3]_25 chr10:111985587-11198566 0.00045 51_[+3]_21 chr19:51142563-51142643 0.00045 3_[+3]_69 chr9:134955269-134955349 0.00047 71_[+3]_1 chr19:57946550-57946630 0.00047 53_[+3]_19 chr16:29687592-29687672 0.00047 62_[+3]_10 chr12:54582820-54582900 0.00052 60_[+3]_12 chr16:58664412-58664492 0.00057 [+3]_72 chr14:24701754-24701834 0.00057 27_[+3]_45 chr19:49486854-49486934 0.00063 6_[+3]_66 chr19:47049933-47050013 0.00069 64_[+3]_8 chr11:46271172-46271252 0.00074 7_[+3]_65 chr1:147142675-147142755 0.00083 50_[+3]_22 chr10:43048322-43048402 0.00083 47_[+3]_25 chr19:50163163-50163243 0.00083 12_[+3]_60 chr11:919198-919278 0.00083 11_[+3]_61 chr6:167000380-167000460 0.00091 2_[+3]_70 chr13:26827953-26828033 0.00091 3_[+3]_69 chr12:861520-861600 0.00091 10_[+3]_62 chr20:45810098-45810178 0.001 17_[+3]_55 chr3:69788447-69788527 0.0012 49_[+3]_23 chr19:41571013-41571093 0.0012 10_[+3]_62 chr19:49385137-49385217 0.0012 11_[+3]_61 chr11:134123334-13412341 0.0013 50_[+3]_22 chr16:31045650-31045730 0.0013 31_[+3]_41 chr11:60681311-60681391 0.0013 19_[+3]_53 chr1:154979441-154979521 0.0014 17_[+3]_55 chr9:130965520-130965600 0.0015 11_[+3]_61 chr12:121488680-12148876 0.0015 41_[+3]_31 chr7:20257099-20257179 0.0015 14_[+3]_58 chr19:49248612-49248692 0.0015 6_[+3]_66 chr19:49362011-49362091 0.0015 6_[+3]_66 chr16:19535077-19535157 0.0016 1_[+3]_71 chr16:58426723-58426803 0.0016 10_[+3]_62 chr6:43215026-43215106 0.0016 6_[+3]_66 chr15:79165113-79165193 0.0016 6_[+3]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCCAGSA width=8 seqs=156 chr19:4180275-4180355 ( 19) TCCCAGCA 1 chr4:6374774-6374854 ( 32) TCCCAGCA 1 chr5:153211681-153211761 ( 24) TCCCAGCA 1 chr3:13933300-13933380 ( 36) TCCCAGCA 1 chr22:33300165-33300245 ( 20) TCCCAGCA 1 chr14:68286393-68286473 ( 14) TCCCAGCA 1 chr11:64456045-64456125 ( 48) TCCCAGCA 1 chr12:32832073-32832153 ( 26) TCCCAGCA 1 chr19:58838285-58838365 ( 20) TCCCAGCA 1 chr17:46908255-46908335 ( 37) TCCCAGCA 1 chr2:86332688-86332768 ( 4) TCCCAGCA 1 chr19:19887278-19887358 ( 47) TCCCAGCA 1 chr19:17721334-17721414 ( 14) TCCCAGCA 1 chr22:22020217-22020297 ( 36) TCCCAGCA 1 chr1:224544442-224544522 ( 4) TCCCAGCA 1 chr9:132346484-132346564 ( 19) TCCCAGCA 1 chr2:232646292-232646372 ( 16) TCCCAGCA 1 chr16:53468290-53468370 ( 14) TCCCAGCA 1 chr19:45988712-45988792 ( 11) TCCCAGCA 1 chr8:124054105-124054185 ( 3) TCCCAGCA 1 chr1:22755262-22755342 ( 24) TCCCAGCA 1 chr19:49148180-49148260 ( 12) TCCCAGCA 1 chr17:40559668-40559748 ( 25) TCCCAGCA 1 chr11:46134684-46134764 ( 11) TCCCAGCA 1 chr19:55816992-55817072 ( 11) TCCCAGCA 1 chr19:48922673-48922753 ( 9) TCCCAGCA 1 chr7:152887689-152887769 ( 21) TCCCAGAA 1 chr9:101172675-101172755 ( 25) TCCCAGAA 1 chr10:38265598-38265678 ( 26) TCCCAGAA 1 chr19:49223922-49224002 ( 47) TCCCAGAA 1 chr5:178286879-178286959 ( 27) TCCCAGAA 1 chr19:44809190-44809270 ( 71) TCCCAGAA 1 chr2:217277069-217277149 ( 29) TCCCAGAA 1 chr14:82000454-82000534 ( 24) TCCCAGAA 1 chr19:51963844-51963924 ( 23) TCCCAGAA 1 chr19:49479589-49479669 ( 13) TCCCAGAA 1 chr19:46027160-46027240 ( 14) TCCCAGAA 1 chr17:7358812-7358892 ( 13) TCCCAGAA 1 chr8:82755020-82755100 ( 15) TCCCAGAA 1 chr19:54382692-54382772 ( 72) TCCCAGAA 1 chr19:50651539-50651619 ( 12) TCCCAGAA 1 chr19:54396426-54396506 ( 9) TCCCAGAA 1 chr20:62694375-62694455 ( 25) TCCCAGGA 1 chr2:54950535-54950615 ( 71) TCCCAGGA 1 chr7:76751692-76751772 ( 64) TCCCAGGA 1 chr3:50397061-50397141 ( 27) TCCCAGGA 1 chr16:31119649-31119729 ( 23) TCCCAGGA 1 chr12:56710133-56710213 ( 13) TCCCAGGA 1 chr19:48866427-48866507 ( 15) TCCCAGGA 1 chr3:61235753-61235833 ( 61) TCCCAGGA 1 chr19:40697262-40697342 ( 38) TCCCAGGA 1 chr9:72435530-72435610 ( 7) TCCCAGGA 1 chr19:49422139-49422219 ( 42) TCCCAGGA 1 chr6:10147338-10147418 ( 49) TCCCAGGA 1 chr19:49228256-49228336 ( 4) TCCCAGGA 1 chr19:55831280-55831360 ( 6) TCCCAGGA 1 chr2:88844831-88844911 ( 57) TCCCAGCC 1 chr19:14743255-14743335 ( 6) TCCCAGCC 1 chr9:132079961-132080041 ( 12) TCCCAGCC 1 chr9:133003018-133003098 ( 16) TCCCAGCC 1 chr12:119667748-11966782 ( 32) TCCCAGCC 1 chr19:13512344-13512424 ( 21) TCCCAGCC 1 chr6:41703385-41703465 ( 7) TCCCAGCC 1 chr16:74729864-74729944 ( 15) TCCCAGCC 1 chr16:84300112-84300192 ( 15) TCCCAGCC 1 chr19:47942188-47942268 ( 50) TCCCAGCC 1 chr20:750599-750679 ( 12) TCCCAGCC 1 chr20:49084694-49084774 ( 19) TCCCAGCC 1 chr17:19912578-19912658 ( 13) TCCCAGCG 1 chr1:243418776-243418856 ( 20) TCCCAGCG 1 chr19:50501074-50501154 ( 16) TCCCAGCT 1 chr8:145159789-145159869 ( 23) CCCCAGCA 1 chr11:107436426-10743650 ( 46) TCCCATGA 1 chr16:87009105-87009185 ( 26) CCCCAGCA 1 chr8:140688118-140688198 ( 18) TCCCAGAC 1 chr3:50388511-50388591 ( 26) TCCCAGCT 1 chr6:15245641-15245721 ( 49) TCCCAGCT 1 chr2:44001101-44001181 ( 18) TCCCATGA 1 chr19:51152938-51153018 ( 64) TCCCATGA 1 chr19:55708326-55708406 ( 10) TCCCATGA 1 chr1:205744604-205744684 ( 12) TCCCAGCT 1 chr11:69614414-69614494 ( 13) TCCCAGAC 1 chr7:150689947-150690027 ( 11) CCCCAGCA 1 chr16:30908459-30908539 ( 23) CCCCAGCA 1 chrX:47050071-47050151 ( 7) CCCCAGCA 1 chr19:49224354-49224434 ( 8) CCCCAGCA 1 chr12:104323504-10432358 ( 40) CCCCAGCA 1 chr15:63481580-63481660 ( 29) TCCCATGA 1 chr7:1465366-1465446 ( 15) CCCCAGCA 1 chr19:55690510-55690590 ( 6) TCCCATGA 1 chr19:54480863-54480943 ( 9) TCCCATGA 1 chr19:55709049-55709129 ( 10) TCCCATGA 1 chr19:54682365-54682445 ( 5) TCCCATGA 1 chr19:49310026-49310106 ( 10) TCCCATGA 1 chr14:73493967-73494047 ( 31) TCCCAGTA 1 chr12:124594394-12459447 ( 26) TCCCAGGC 1 chr2:36845625-36845705 ( 28) TCCCAGGC 1 chr3:14361228-14361308 ( 29) TCCCAGGC 1 chr6:14800251-14800331 ( 34) TCCCAGGC 1 chr2:38892990-38893070 ( 40) TCCCAACA 1 chr19:4304532-4304612 ( 34) TCCCAGGC 1 chr19:55677437-55677517 ( 16) TCCCAGTA 1 chr17:7118414-7118494 ( 7) TCCCAACA 1 chr19:49404473-49404553 ( 4) TCCCAGTA 1 chr17:7094940-7095020 ( 10) TCCCAACA 1 chr19:37569243-37569323 ( 7) TCCCAGAG 1 chr11:73661963-73662043 ( 47) TCCCAGAG 1 chr12:88535958-88536038 ( 35) TCCCAGAG 1 chr6:52929627-52929707 ( 11) TCCCAGAG 1 chr19:36208416-36208496 ( 13) TCCCAGGG 1 chr19:49416528-49416608 ( 8) TCCCAGGG 1 chr19:1241636-1241716 ( 13) CCCCAGAA 1 chr15:76461555-76461635 ( 28) TCCCAGAT 1 chr19:10028075-10028155 ( 18) TCCCAGAT 1 chr5:131526030-131526110 ( 13) TCCCAGAT 1 chr2:2617313-2617393 ( 16) CCCCAGGA 1 chr20:25677517-25677597 ( 24) ACCCAGCA 1 chr13:41768695-41768775 ( 13) TCCCAGGT 1 chr19:49250485-49250565 ( 13) TCCCAAAA 1 chr16:30103254-30103334 ( 14) TCCCGGCA 1 chr19:38397741-38397821 ( 48) TCCCGGCA 1 chr10:111985587-11198566 ( 52) TCCCGGCA 1 chr19:51142563-51142643 ( 4) TCCCGGCA 1 chr9:134955269-134955349 ( 72) ACCCAGAA 1 chr19:57946550-57946630 ( 54) ACCCAGAA 1 chr16:29687592-29687672 ( 63) ACCCAGAA 1 chr12:54582820-54582900 ( 61) TCCCGGAA 1 chr16:58664412-58664492 ( 1) TCCCATCG 1 chr14:24701754-24701834 ( 28) TCCCATCG 1 chr19:49486854-49486934 ( 7) CCCCATCA 1 chr19:47049933-47050013 ( 65) CCCCAGCC 1 chr11:46271172-46271252 ( 8) TCCCAACC 1 chr1:147142675-147142755 ( 51) TCCCACAA 1 chr10:43048322-43048402 ( 48) TCCCACAA 1 chr19:50163163-50163243 ( 13) TCCCTGCA 1 chr11:919198-919278 ( 12) TCCCTGCA 1 chr6:167000380-167000460 ( 3) TCCCAGTG 1 chr13:26827953-26828033 ( 4) TCCCATAT 1 chr12:861520-861600 ( 11) TCCCACGA 1 chr20:45810098-45810178 ( 18) CCCCAGCT 1 chr3:69788447-69788527 ( 50) CCCCAGGC 1 chr19:41571013-41571093 ( 11) TCCCAAGC 1 chr19:49385137-49385217 ( 12) TCCCAATA 1 chr11:134123334-13412341 ( 51) CCCCAGGG 1 chr16:31045650-31045730 ( 32) CCCCAGGG 1 chr11:60681311-60681391 ( 20) CCCCAGGG 1 chr1:154979441-154979521 ( 18) TCCCAAGG 1 chr9:130965520-130965600 ( 12) ACCCATGA 1 chr12:121488680-12148876 ( 42) ACCCAGCT 1 chr7:20257099-20257179 ( 15) CCCCAAAA 1 chr19:49248612-49248692 ( 7) ACCCATGA 1 chr19:49362011-49362091 ( 7) ACCCATGA 1 chr16:19535077-19535157 ( 2) TCCCGGCG 1 chr16:58426723-58426803 ( 11) TCCCGGCG 1 chr6:43215026-43215106 ( 7) TCCCGGCG 1 chr15:79165113-79165193 ( 7) TCCCGGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.78451 E= 4.7e-105 -205 -132 -1393 202 -1393 179 -1393 -1393 -1393 179 -1393 -1393 -1393 179 -1393 -1393 213 -1393 -235 -400 -188 -391 147 -91 8 70 -9 -268 164 -97 -127 -154 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 156 E= 4.7e-105 0.051282 0.115385 0.000000 0.833333 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.929487 0.000000 0.057692 0.012821 0.057692 0.019231 0.814103 0.108974 0.224359 0.467949 0.275641 0.032051 0.660256 0.147436 0.121795 0.070513 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCCAGSA MEME-3 regular expression -------------------------------------------------------------------------------- TCCCAG[CGA]A -------------------------------------------------------------------------------- Time 11.16 secs. ******************************************************************************** ******************************************************************************** MOTIF GTAGTYYY MEME-4 width = 8 sites = 88 llr = 749 E-value = 2.1e-072 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::a::::2 pos.-specific C :::::652 probability G a::a:::1 matrix T :a::a454 bits 2.3 ** * 2.1 ** * 1.8 ***** 1.6 ***** Relative 1.4 ***** Entropy 1.1 ***** (12.3 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel GTAGTCTT consensus TCC sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:21226434-21226514 70 9.35e-06 gttgggaaat gtagtctt cat chr10:71754201-71754281 69 9.35e-06 gctgggaaat gtagtctt taac chr1:156308547-156308627 29 9.35e-06 AGTGGGAGTT GTAGTCTT ACCGGGCCGG chr12:121488680-12148876 69 9.35e-06 gctgggaaat gtagtctt tagc chr20:49116086-49116166 60 9.35e-06 gttgggaaat gtagtctt tagccaggca chr10:103892664-10389274 60 9.35e-06 TCTGGGATTC GTAGTCTT GCAGTGTCAT chr22:39886319-39886399 67 9.35e-06 cctgggaagt gtagtctt cagcgg chr15:76461555-76461635 55 9.35e-06 gctgggaaat gtagtctt tagttgggtg chr21:35340754-35340834 65 9.35e-06 actgggaaat gtagtctt tggccagg chr10:73083337-73083417 59 9.35e-06 gctgggaaat gtagtctt tcaatgtagc chr20:45779474-45779554 73 9.35e-06 cctgggaaat gtagtctt chr1:20767411-20767491 73 9.35e-06 gctgggaaat gtagtctt chr10:72288716-72288796 51 9.35e-06 gctgggaaat gtagtctt cagctgggtg chr1:31327130-31327210 69 9.35e-06 gctgggaaac gtagtctt tctt chr17:77702489-77702569 69 9.35e-06 gctgggaaat gtagtctt tctt chr16:33569512-33569592 69 9.35e-06 gctgggaaat gtagtctt tctt chr11:919198-919278 69 9.35e-06 gctgggaaat gtagtctt gatt chr21:35402523-35402603 53 1.60e-05 gctgggaaat gtagtttt cctgcatgct chr3:69788447-69788527 29 1.60e-05 TCTGGGAGCT GTAGTTTT CGTGGGAGCG chr4:7075465-7075545 66 1.60e-05 gctgggaaat gtagtttt tattccc chr16:58426723-58426803 70 1.60e-05 TTTGGGATTT GTAGTTTT CGA chr4:79575005-79575085 60 1.60e-05 actaggaaat gtagtttt tgtcttgaga chr19:50163163-50163243 71 1.60e-05 GCTGGGAGTT GTAGTTTT ac chr13:31736508-31736588 39 2.92e-05 GCTGGGATGT GTAGTCCT GGCCGCAGTG chr19:42463532-42463612 68 2.92e-05 TGTGGGAGTT GTAGTCCT GACGG chr19:49017221-49017301 66 2.92e-05 TGTAGGAAAT GTAGTCCT GCTCGAC chr17:7094940-7095020 73 2.92e-05 GCTGGGAAAT GTAGTCCT chr1:154979441-154979521 61 2.92e-05 ACTGGGAGTT GTAGTCCT TGAGCTCTCA chr7:76751692-76751772 11 3.85e-05 GACGGGATAC GTAGTTCT AAAGCGGTGG chr1:234812121-234812201 34 3.85e-05 gctgggggtt gtagttct cgtgtactcc chr6:41703385-41703465 42 3.85e-05 ACTGGGAAGC GTAGTTCT CGCTGCAGTC chr19:49947081-49947161 58 3.85e-05 GCTGGGAGAT GTAGTTCT CTGAGACGAT chr6:6890948-6891028 71 3.85e-05 cctgggaaat gtagttct ca chr6:31866308-31866388 38 3.85e-05 TCTGGGAACT GTAGTTCT CTTTGGTTAA chr20:48732481-48732561 38 4.82e-05 GCTGGTTGTT GTAGTCTA GCGTTGGCGC chr2:180872037-180872117 50 5.51e-05 AAGCATAATT GTAGTTTA GCGTGAAATG chr13:41837989-41838069 31 5.51e-05 CCTGGGAGTT GTAGTTTA CCTTGCGGCA chr16:29687592-29687672 48 5.51e-05 gctgggaaat gtagttta gtagggtacc chr12:49449932-49450012 33 6.82e-05 GCTGGGAGTT GTAGTCTC AGGAAGCATA chr6:6737557-6737637 51 6.82e-05 GCTGGGACTT GTAGTCTC CGCGGGCAAG chr6:43215026-43215106 66 6.82e-05 GCTGGGAGTT GTAGTCTC AGCCTCC chr8:124054105-124054185 72 6.82e-05 CCTGGGGCCT GTAGTCTC C chr19:48907010-48907090 28 6.82e-05 GCTGGGAGAT GTAGTCTC CTCACTGCCT chr17:40559668-40559748 69 6.82e-05 GCTGGGACTT GTAGTCTC TACC chr19:54411496-54411576 68 6.82e-05 GATGGGAAAT GTAGTCTC CGGTC chr16:67700644-67700724 73 9.12e-05 CCTGGGGCTT GTAGTTTC chr18:60382251-60382331 34 9.12e-05 GCTGGGACTT GTAGTCCA CCATGTTTCC chr16:9147099-9147179 65 9.12e-05 gctgggaaat gtagtcca gccacaag chr17:17653421-17653501 64 9.12e-05 gctgggaaat gtagtcca gctgtggct chr1:156052280-156052360 57 9.12e-05 GCCGGGAGTT GTAGTTTC CCGCCCTTGG chr17:38083866-38083946 55 9.12e-05 TCTGGGAGTT GTAGTTTC TTCCGCTGGC chr1:15288457-15288537 66 9.12e-05 tctgggaaat gtagtttc tagctag chr14:81408123-81408203 21 9.12e-05 TCTGGGAGTT GTAGTCCA TCTCGGCCTC chr16:15150037-15150117 8 9.12e-05 GGGAAAT GTAGTCCA AAGCCAGGAA chr20:45810098-45810178 68 9.12e-05 gctgggaaat gtagtcca tagct chr19:44598415-44598495 9 9.12e-05 TGGGAAGT GTAGTCCA GACGCTCAGT chr19:36208416-36208496 64 9.12e-05 CCTGGGAGTG GTAGTCCA CGCGGGCCG chr6:157801086-157801166 27 9.12e-05 GCAGGGACTT GTAGTTTC TAAGGCCCCG chr14:82000454-82000534 73 9.12e-05 CTTGGGAAAC GTAGTCCA chr19:49228256-49228336 72 9.12e-05 TCTGGGAGTT GTAGTCCA T chr19:55815809-55815889 71 9.12e-05 CCTGGGAGTT GTAGTCCA CT chr17:4634602-4634682 19 1.01e-04 CCTGGGAGTT GTAGTTCA TCAAGCGGAC chr1:155113005-155113085 60 1.01e-04 TCTGGGAGTT GTAGTTCA CATGGCGGCG chr17:40075335-40075415 62 1.19e-04 GCTGGGACTT GTAGTCCC GCTGGCCCAT chr1:17338459-17338539 48 1.19e-04 GCCGGGACTT GTAGTCCC CGCCTGCTCC chr9:97021486-97021566 10 1.19e-04 CTGGATGTT GTAGTCCC TCGCTCCAGG chr8:145159789-145159869 63 1.33e-04 CCTGGGATTT GTAGTTCC ACCGCGGCTT chr16:31045650-31045730 52 1.33e-04 TGTGGGGGTT GTAGTTCC ACGCAGGTGG chr3:61235753-61235833 7 1.33e-04 GGAGTT GTAGTTCC GAGTCAAGCG chr19:41084515-41084595 47 1.33e-04 AGTGGGAGGT GTAGTTCC CTATCAGATG chr5:178157717-178157797 64 1.33e-04 TCGGGGAAGT GTAGTTCC ATGCGTTTG chr10:38383176-38383256 2 1.46e-04 T GTAGTCTG CACTTTCTAA chr2:133104956-133105036 3 1.56e-04 GT GTAGTTTG GGAGCCCCGT chr6:33783805-33783885 68 1.56e-04 cctgggaaat gtagtttg tgggg chr2:136288409-136288489 73 1.75e-04 GTTGGGAATC GTAGTCCG chr21:15755514-15755594 18 1.75e-04 CCTGGGAAAT GTAGTCCG CTTGCTCTGA chr2:10552683-10552763 64 1.75e-04 gctgggaaat gtagtccg gctgtgtgc chr1:47799901-47799981 67 1.75e-04 GCCGGGACTT GTAGTCCG CGCCCG chr19:7616357-7616437 2 1.75e-04 T GTAGTCCG GCGTCCAGAG chr11:66138872-66138952 67 1.88e-04 GATGGGAATT GTAGTTCG ATCCGG chr17:76250656-76250736 11 1.88e-04 GCTGGGAGTT GTAGTTCG CGCTCCCTCG chr16:46918130-46918210 22 1.88e-04 TGTGGGACTT GTAGTTCG CGTCACTCTC chr1:18779222-18779302 67 1.98e-04 tctgggaaat gtagtcat ctgtat chr8:82755020-82755100 73 1.98e-04 CATGGGACTT GTAGTCAT chr16:19535077-19535157 73 2.14e-04 CTCGGGGATG GTAGTGTT chr6:44101535-44101615 46 2.27e-04 TCTGGGAGTT GTAGTGCT CATAACACTC chr1:243419203-243419283 17 2.68e-04 TCTGGGAATT GTAGTGTA ACTGGAAGGC chr16:58664412-58664492 70 2.68e-04 GCTGGGGGTT GTAGTCAC CCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:21226434-21226514 9.4e-06 69_[+4]_3 chr10:71754201-71754281 9.4e-06 68_[+4]_4 chr1:156308547-156308627 9.4e-06 28_[+4]_44 chr12:121488680-12148876 9.4e-06 68_[+4]_4 chr20:49116086-49116166 9.4e-06 59_[+4]_13 chr10:103892664-10389274 9.4e-06 59_[+4]_13 chr22:39886319-39886399 9.4e-06 66_[+4]_6 chr15:76461555-76461635 9.4e-06 54_[+4]_18 chr21:35340754-35340834 9.4e-06 64_[+4]_8 chr10:73083337-73083417 9.4e-06 58_[+4]_14 chr20:45779474-45779554 9.4e-06 72_[+4] chr1:20767411-20767491 9.4e-06 72_[+4] chr10:72288716-72288796 9.4e-06 50_[+4]_22 chr1:31327130-31327210 9.4e-06 68_[+4]_4 chr17:77702489-77702569 9.4e-06 68_[+4]_4 chr16:33569512-33569592 9.4e-06 68_[+4]_4 chr11:919198-919278 9.4e-06 68_[+4]_4 chr21:35402523-35402603 1.6e-05 52_[+4]_20 chr3:69788447-69788527 1.6e-05 28_[+4]_44 chr4:7075465-7075545 1.6e-05 65_[+4]_7 chr16:58426723-58426803 1.6e-05 69_[+4]_3 chr4:79575005-79575085 1.6e-05 59_[+4]_13 chr19:50163163-50163243 1.6e-05 70_[+4]_2 chr13:31736508-31736588 2.9e-05 38_[+4]_34 chr19:42463532-42463612 2.9e-05 67_[+4]_5 chr19:49017221-49017301 2.9e-05 65_[+4]_7 chr17:7094940-7095020 2.9e-05 72_[+4] chr1:154979441-154979521 2.9e-05 60_[+4]_12 chr7:76751692-76751772 3.9e-05 10_[+4]_62 chr1:234812121-234812201 3.9e-05 33_[+4]_39 chr6:41703385-41703465 3.9e-05 41_[+4]_31 chr19:49947081-49947161 3.9e-05 57_[+4]_15 chr6:6890948-6891028 3.9e-05 70_[+4]_2 chr6:31866308-31866388 3.9e-05 37_[+4]_35 chr20:48732481-48732561 4.8e-05 37_[+4]_35 chr2:180872037-180872117 5.5e-05 49_[+4]_23 chr13:41837989-41838069 5.5e-05 30_[+4]_42 chr16:29687592-29687672 5.5e-05 47_[+4]_25 chr12:49449932-49450012 6.8e-05 32_[+4]_40 chr6:6737557-6737637 6.8e-05 50_[+4]_22 chr6:43215026-43215106 6.8e-05 65_[+4]_7 chr8:124054105-124054185 6.8e-05 71_[+4]_1 chr19:48907010-48907090 6.8e-05 27_[+4]_45 chr17:40559668-40559748 6.8e-05 68_[+4]_4 chr19:54411496-54411576 6.8e-05 67_[+4]_5 chr16:67700644-67700724 9.1e-05 72_[+4] chr18:60382251-60382331 9.1e-05 33_[+4]_39 chr16:9147099-9147179 9.1e-05 64_[+4]_8 chr17:17653421-17653501 9.1e-05 63_[+4]_9 chr1:156052280-156052360 9.1e-05 56_[+4]_16 chr17:38083866-38083946 9.1e-05 54_[+4]_18 chr1:15288457-15288537 9.1e-05 65_[+4]_7 chr14:81408123-81408203 9.1e-05 20_[+4]_52 chr16:15150037-15150117 9.1e-05 7_[+4]_65 chr20:45810098-45810178 9.1e-05 67_[+4]_5 chr19:44598415-44598495 9.1e-05 8_[+4]_64 chr19:36208416-36208496 9.1e-05 63_[+4]_9 chr6:157801086-157801166 9.1e-05 26_[+4]_46 chr14:82000454-82000534 9.1e-05 72_[+4] chr19:49228256-49228336 9.1e-05 71_[+4]_1 chr19:55815809-55815889 9.1e-05 70_[+4]_2 chr17:4634602-4634682 0.0001 18_[+4]_54 chr1:155113005-155113085 0.0001 59_[+4]_13 chr17:40075335-40075415 0.00012 61_[+4]_11 chr1:17338459-17338539 0.00012 47_[+4]_25 chr9:97021486-97021566 0.00012 9_[+4]_63 chr8:145159789-145159869 0.00013 62_[+4]_10 chr16:31045650-31045730 0.00013 51_[+4]_21 chr3:61235753-61235833 0.00013 6_[+4]_66 chr19:41084515-41084595 0.00013 46_[+4]_26 chr5:178157717-178157797 0.00013 63_[+4]_9 chr10:38383176-38383256 0.00015 1_[+4]_71 chr2:133104956-133105036 0.00016 2_[+4]_70 chr6:33783805-33783885 0.00016 67_[+4]_5 chr2:136288409-136288489 0.00017 72_[+4] chr21:15755514-15755594 0.00017 17_[+4]_55 chr2:10552683-10552763 0.00017 63_[+4]_9 chr1:47799901-47799981 0.00017 66_[+4]_6 chr19:7616357-7616437 0.00017 1_[+4]_71 chr11:66138872-66138952 0.00019 66_[+4]_6 chr17:76250656-76250736 0.00019 10_[+4]_62 chr16:46918130-46918210 0.00019 21_[+4]_51 chr1:18779222-18779302 0.0002 66_[+4]_6 chr8:82755020-82755100 0.0002 72_[+4] chr16:19535077-19535157 0.00021 72_[+4] chr6:44101535-44101615 0.00023 45_[+4]_27 chr1:243419203-243419283 0.00027 16_[+4]_56 chr16:58664412-58664492 0.00027 69_[+4]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTAGTYYY width=8 seqs=88 chr17:21226434-21226514 ( 70) GTAGTCTT 1 chr10:71754201-71754281 ( 69) GTAGTCTT 1 chr1:156308547-156308627 ( 29) GTAGTCTT 1 chr12:121488680-12148876 ( 69) GTAGTCTT 1 chr20:49116086-49116166 ( 60) GTAGTCTT 1 chr10:103892664-10389274 ( 60) GTAGTCTT 1 chr22:39886319-39886399 ( 67) GTAGTCTT 1 chr15:76461555-76461635 ( 55) GTAGTCTT 1 chr21:35340754-35340834 ( 65) GTAGTCTT 1 chr10:73083337-73083417 ( 59) GTAGTCTT 1 chr20:45779474-45779554 ( 73) GTAGTCTT 1 chr1:20767411-20767491 ( 73) GTAGTCTT 1 chr10:72288716-72288796 ( 51) GTAGTCTT 1 chr1:31327130-31327210 ( 69) GTAGTCTT 1 chr17:77702489-77702569 ( 69) GTAGTCTT 1 chr16:33569512-33569592 ( 69) GTAGTCTT 1 chr11:919198-919278 ( 69) GTAGTCTT 1 chr21:35402523-35402603 ( 53) GTAGTTTT 1 chr3:69788447-69788527 ( 29) GTAGTTTT 1 chr4:7075465-7075545 ( 66) GTAGTTTT 1 chr16:58426723-58426803 ( 70) GTAGTTTT 1 chr4:79575005-79575085 ( 60) GTAGTTTT 1 chr19:50163163-50163243 ( 71) GTAGTTTT 1 chr13:31736508-31736588 ( 39) GTAGTCCT 1 chr19:42463532-42463612 ( 68) GTAGTCCT 1 chr19:49017221-49017301 ( 66) GTAGTCCT 1 chr17:7094940-7095020 ( 73) GTAGTCCT 1 chr1:154979441-154979521 ( 61) GTAGTCCT 1 chr7:76751692-76751772 ( 11) GTAGTTCT 1 chr1:234812121-234812201 ( 34) GTAGTTCT 1 chr6:41703385-41703465 ( 42) GTAGTTCT 1 chr19:49947081-49947161 ( 58) GTAGTTCT 1 chr6:6890948-6891028 ( 71) GTAGTTCT 1 chr6:31866308-31866388 ( 38) GTAGTTCT 1 chr20:48732481-48732561 ( 38) GTAGTCTA 1 chr2:180872037-180872117 ( 50) GTAGTTTA 1 chr13:41837989-41838069 ( 31) GTAGTTTA 1 chr16:29687592-29687672 ( 48) GTAGTTTA 1 chr12:49449932-49450012 ( 33) GTAGTCTC 1 chr6:6737557-6737637 ( 51) GTAGTCTC 1 chr6:43215026-43215106 ( 66) GTAGTCTC 1 chr8:124054105-124054185 ( 72) GTAGTCTC 1 chr19:48907010-48907090 ( 28) GTAGTCTC 1 chr17:40559668-40559748 ( 69) GTAGTCTC 1 chr19:54411496-54411576 ( 68) GTAGTCTC 1 chr16:67700644-67700724 ( 73) GTAGTTTC 1 chr18:60382251-60382331 ( 34) GTAGTCCA 1 chr16:9147099-9147179 ( 65) GTAGTCCA 1 chr17:17653421-17653501 ( 64) GTAGTCCA 1 chr1:156052280-156052360 ( 57) GTAGTTTC 1 chr17:38083866-38083946 ( 55) GTAGTTTC 1 chr1:15288457-15288537 ( 66) GTAGTTTC 1 chr14:81408123-81408203 ( 21) GTAGTCCA 1 chr16:15150037-15150117 ( 8) GTAGTCCA 1 chr20:45810098-45810178 ( 68) GTAGTCCA 1 chr19:44598415-44598495 ( 9) GTAGTCCA 1 chr19:36208416-36208496 ( 64) GTAGTCCA 1 chr6:157801086-157801166 ( 27) GTAGTTTC 1 chr14:82000454-82000534 ( 73) GTAGTCCA 1 chr19:49228256-49228336 ( 72) GTAGTCCA 1 chr19:55815809-55815889 ( 71) GTAGTCCA 1 chr17:4634602-4634682 ( 19) GTAGTTCA 1 chr1:155113005-155113085 ( 60) GTAGTTCA 1 chr17:40075335-40075415 ( 62) GTAGTCCC 1 chr1:17338459-17338539 ( 48) GTAGTCCC 1 chr9:97021486-97021566 ( 10) GTAGTCCC 1 chr8:145159789-145159869 ( 63) GTAGTTCC 1 chr16:31045650-31045730 ( 52) GTAGTTCC 1 chr3:61235753-61235833 ( 7) GTAGTTCC 1 chr19:41084515-41084595 ( 47) GTAGTTCC 1 chr5:178157717-178157797 ( 64) GTAGTTCC 1 chr10:38383176-38383256 ( 2) GTAGTCTG 1 chr2:133104956-133105036 ( 3) GTAGTTTG 1 chr6:33783805-33783885 ( 68) GTAGTTTG 1 chr2:136288409-136288489 ( 73) GTAGTCCG 1 chr21:15755514-15755594 ( 18) GTAGTCCG 1 chr2:10552683-10552763 ( 64) GTAGTCCG 1 chr1:47799901-47799981 ( 67) GTAGTCCG 1 chr19:7616357-7616437 ( 2) GTAGTCCG 1 chr11:66138872-66138952 ( 67) GTAGTTCG 1 chr17:76250656-76250736 ( 11) GTAGTTCG 1 chr16:46918130-46918210 ( 22) GTAGTTCG 1 chr1:18779222-18779302 ( 67) GTAGTCAT 1 chr8:82755020-82755100 ( 73) GTAGTCAT 1 chr16:19535077-19535157 ( 73) GTAGTGTT 1 chr6:44101535-44101615 ( 46) GTAGTGCT 1 chr1:243419203-243419283 ( 17) GTAGTGTA 1 chr16:58664412-58664492 ( 70) GTAGTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.2272 E= 2.1e-072 -1310 -1310 177 -1310 -1310 -1310 -1310 228 224 -1310 -1310 -1310 -1310 -1310 177 -1310 -1310 -1310 -1310 228 -1310 106 -311 82 -264 69 -1310 128 -5 -28 -123 107 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 88 E= 2.1e-072 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.602273 0.034091 0.363636 0.034091 0.465909 0.000000 0.500000 0.204545 0.238636 0.125000 0.431818 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTAGTYYY MEME-4 regular expression -------------------------------------------------------------------------------- GTAGT[CT][TC][TCA] -------------------------------------------------------------------------------- Time 14.14 secs. ******************************************************************************** ******************************************************************************** MOTIF GTCAYRTG MEME-5 width = 8 sites = 47 llr = 405 E-value = 3.3e-019 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 2::a:4:: pos.-specific C :3a:5::: probability G 8::::6:a matrix T :7::5:a: bits 2.3 * * 2.1 * * 1.8 ** ** 1.6 ** ** Relative 1.4 ** ** Entropy 1.1 ***** ** (12.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GTCACGTG consensus AC TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr21:35402523-35402603 13 9.67e-06 gccaggccca gtcatatg ccctcaacta chr20:49116086-49116166 21 9.67e-06 tcagcatgca gtcatatg gcacatctag chr19:17721334-17721414 42 9.67e-06 gctaagtgtg gtcatatg actatgtttt chr17:17653421-17653501 24 2.31e-05 ctggagcaca gtcatgtg accatgccca chr1:15288457-15288537 26 2.31e-05 caagagcttg gtcatgtg accattccta chr6:167000380-167000460 49 2.31e-05 ggcaggtgtg gtcatgtg actagccctg chr16:87009105-87009185 52 2.31e-05 agctgggtgt gtcatgtg attggattct chr19:47049933-47050013 20 2.31e-05 ggaggaccca gtcatgtg gctgcagcca chr19:49835010-49835090 22 3.67e-05 cccaagacca gtcacatg gcctcaactt chr17:21226434-21226514 30 3.67e-05 gcagtattgg gtcacatg gccagccgtg chr10:71754201-71754281 29 3.67e-05 cctgaactaa gtcacatg accacagcca chr9:132079961-132080041 39 3.67e-05 gctgggagtg gtcacatg acccggctct chr2:10552683-10552763 24 3.67e-05 ccagagtgta gtcacatg gtaccaccta chr22:39886319-39886399 27 3.67e-05 ctgggactca gtcacatg gccacaagca chr19:6812068-6812148 17 3.67e-05 gccagaagca gtcacatg actgcatcca chr21:35340754-35340834 26 3.67e-05 gctttacctc gtcacatg accatggcta chr1:18779222-18779302 26 3.67e-05 gctagaacta gtcacatg acccccacat chr1:20767411-20767491 34 3.67e-05 ctggacccca gtcacatg gtcagactgg chr4:7075465-7075545 27 3.67e-05 gcaaaatgtg gtcacatg ccacacctgg chr1:31327130-31327210 29 3.67e-05 ggccacgtta gtcacatg gccccacctg chr16:9147099-9147179 25 5.56e-05 cccaaatcca gtcacgtg cccaccctca chr20:45810098-45810178 28 5.56e-05 ccccagctta gtcacgtg gccacaagta chr2:36845625-36845705 55 5.56e-05 gctccatgtg gtcacgtg aatgagttct chr17:77702489-77702569 29 5.56e-05 tcaaaatgtg gtcacgtg gccctgcttt chr4:79575005-79575085 20 5.56e-05 acagagatta gtcacgtg gccacagtta chr16:33569512-33569592 29 5.56e-05 ccaaaatgtg gtcacgtg gccatgcttt chr19:14743255-14743335 33 8.59e-05 gctgggtgtt atcatgtg acaaagatca chr12:119667748-11966782 59 8.59e-05 gcaaggtcga atcatgtg actaagttct chr8:140688118-140688198 45 8.59e-05 cttaggtagg atcatgtg accaagtgct chr10:72288716-72288796 11 8.59e-05 cagaacttaa atcatgtg accacaatga chr2:88844831-88844911 43 1.05e-04 ataaaacacg gccatgtg actagatccc chr9:133003018-133003098 43 1.05e-04 gctgagtgcg gccatgtg acccagttct chr16:74729864-74729944 42 1.05e-04 acttgatgtg gccatgtg actagttctc chr6:14800251-14800331 61 1.05e-04 gcttggtgtg gccatgtg atcaagttat chr11:69614414-69614494 40 1.05e-04 gcttggagtg gccatgtg actgaaggct chr20:49084694-49084774 46 1.05e-04 gcaagaagcg gccatgtg actgaggtat chr1:22755262-22755342 47 1.05e-04 tgcaggtgtt gccatgtg actgagttct chr7:1465366-1465446 42 1.05e-04 gcctgccctg gccatgtg actatattct chr12:121488680-12148876 29 1.15e-04 tcagaactta atcacatg gtcacaccca chr12:124594394-12459447 53 1.15e-04 cctaggggtg atcacatg gcacagctct chr4:6374774-6374854 59 1.48e-04 cccagacatg gccacatg actagttctg chr5:153211681-153211761 45 1.48e-04 cttagatgtg gccacatg actgagttta chr19:13512344-13512424 48 1.48e-04 gctagcctgg gccacatg actaaattcc chr3:14361228-14361308 56 1.98e-04 gtgaggtagg accatgtg atttagttcc chr16:84300112-84300192 42 1.98e-04 actaggtgtg accatgtg accacattgt chr9:132346484-132346564 46 1.98e-04 gctagatgtg accatgtg atcaagttct chr19:50501074-50501154 43 2.11e-04 gtgaggactg accacatg accaagttct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:35402523-35402603 9.7e-06 12_[+5]_60 chr20:49116086-49116166 9.7e-06 20_[+5]_52 chr19:17721334-17721414 9.7e-06 41_[+5]_31 chr17:17653421-17653501 2.3e-05 23_[+5]_49 chr1:15288457-15288537 2.3e-05 25_[+5]_47 chr6:167000380-167000460 2.3e-05 48_[+5]_24 chr16:87009105-87009185 2.3e-05 51_[+5]_21 chr19:47049933-47050013 2.3e-05 19_[+5]_53 chr19:49835010-49835090 3.7e-05 21_[+5]_51 chr17:21226434-21226514 3.7e-05 29_[+5]_43 chr10:71754201-71754281 3.7e-05 28_[+5]_44 chr9:132079961-132080041 3.7e-05 38_[+5]_34 chr2:10552683-10552763 3.7e-05 23_[+5]_49 chr22:39886319-39886399 3.7e-05 26_[+5]_46 chr19:6812068-6812148 3.7e-05 16_[+5]_56 chr21:35340754-35340834 3.7e-05 25_[+5]_47 chr1:18779222-18779302 3.7e-05 25_[+5]_47 chr1:20767411-20767491 3.7e-05 33_[+5]_39 chr4:7075465-7075545 3.7e-05 26_[+5]_46 chr1:31327130-31327210 3.7e-05 28_[+5]_44 chr16:9147099-9147179 5.6e-05 24_[+5]_48 chr20:45810098-45810178 5.6e-05 27_[+5]_45 chr2:36845625-36845705 5.6e-05 54_[+5]_18 chr17:77702489-77702569 5.6e-05 28_[+5]_44 chr4:79575005-79575085 5.6e-05 19_[+5]_53 chr16:33569512-33569592 5.6e-05 28_[+5]_44 chr19:14743255-14743335 8.6e-05 32_[+5]_40 chr12:119667748-11966782 8.6e-05 58_[+5]_14 chr8:140688118-140688198 8.6e-05 44_[+5]_28 chr10:72288716-72288796 8.6e-05 10_[+5]_62 chr2:88844831-88844911 0.0001 42_[+5]_30 chr9:133003018-133003098 0.0001 42_[+5]_30 chr16:74729864-74729944 0.0001 41_[+5]_31 chr6:14800251-14800331 0.0001 60_[+5]_12 chr11:69614414-69614494 0.0001 39_[+5]_33 chr20:49084694-49084774 0.0001 45_[+5]_27 chr1:22755262-22755342 0.0001 46_[+5]_26 chr7:1465366-1465446 0.0001 41_[+5]_31 chr12:121488680-12148876 0.00011 28_[+5]_44 chr12:124594394-12459447 0.00011 52_[+5]_20 chr4:6374774-6374854 0.00015 58_[+5]_14 chr5:153211681-153211761 0.00015 44_[+5]_28 chr19:13512344-13512424 0.00015 47_[+5]_25 chr3:14361228-14361308 0.0002 55_[+5]_17 chr16:84300112-84300192 0.0002 41_[+5]_31 chr9:132346484-132346564 0.0002 45_[+5]_27 chr19:50501074-50501154 0.00021 42_[+5]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTCAYRTG width=8 seqs=47 chr21:35402523-35402603 ( 13) GTCATATG 1 chr20:49116086-49116166 ( 21) GTCATATG 1 chr19:17721334-17721414 ( 42) GTCATATG 1 chr17:17653421-17653501 ( 24) GTCATGTG 1 chr1:15288457-15288537 ( 26) GTCATGTG 1 chr6:167000380-167000460 ( 49) GTCATGTG 1 chr16:87009105-87009185 ( 52) GTCATGTG 1 chr19:47049933-47050013 ( 20) GTCATGTG 1 chr19:49835010-49835090 ( 22) GTCACATG 1 chr17:21226434-21226514 ( 30) GTCACATG 1 chr10:71754201-71754281 ( 29) GTCACATG 1 chr9:132079961-132080041 ( 39) GTCACATG 1 chr2:10552683-10552763 ( 24) GTCACATG 1 chr22:39886319-39886399 ( 27) GTCACATG 1 chr19:6812068-6812148 ( 17) GTCACATG 1 chr21:35340754-35340834 ( 26) GTCACATG 1 chr1:18779222-18779302 ( 26) GTCACATG 1 chr1:20767411-20767491 ( 34) GTCACATG 1 chr4:7075465-7075545 ( 27) GTCACATG 1 chr1:31327130-31327210 ( 29) GTCACATG 1 chr16:9147099-9147179 ( 25) GTCACGTG 1 chr20:45810098-45810178 ( 28) GTCACGTG 1 chr2:36845625-36845705 ( 55) GTCACGTG 1 chr17:77702489-77702569 ( 29) GTCACGTG 1 chr4:79575005-79575085 ( 20) GTCACGTG 1 chr16:33569512-33569592 ( 29) GTCACGTG 1 chr19:14743255-14743335 ( 33) ATCATGTG 1 chr12:119667748-11966782 ( 59) ATCATGTG 1 chr8:140688118-140688198 ( 45) ATCATGTG 1 chr10:72288716-72288796 ( 11) ATCATGTG 1 chr2:88844831-88844911 ( 43) GCCATGTG 1 chr9:133003018-133003098 ( 43) GCCATGTG 1 chr16:74729864-74729944 ( 42) GCCATGTG 1 chr6:14800251-14800331 ( 61) GCCATGTG 1 chr11:69614414-69614494 ( 40) GCCATGTG 1 chr20:49084694-49084774 ( 46) GCCATGTG 1 chr1:22755262-22755342 ( 47) GCCATGTG 1 chr7:1465366-1465446 ( 42) GCCATGTG 1 chr12:121488680-12148876 ( 29) ATCACATG 1 chr12:124594394-12459447 ( 53) ATCACATG 1 chr4:6374774-6374854 ( 59) GCCACATG 1 chr5:153211681-153211761 ( 45) GCCACATG 1 chr19:13512344-13512424 ( 48) GCCACATG 1 chr3:14361228-14361308 ( 56) ACCATGTG 1 chr16:84300112-84300192 ( 42) ACCATGTG 1 chr9:132346484-132346564 ( 46) ACCATGTG 1 chr19:50501074-50501154 ( 43) ACCACATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.02356 E= 3.3e-019 0 -1220 142 -1220 -1220 14 -1220 173 -1220 179 -1220 -1220 224 -1220 -1220 -1220 -1220 82 -1220 125 107 -1220 91 -1220 -1220 -1220 -1220 228 -1220 -1220 177 -1220 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 47 E= 3.3e-019 0.212766 0.000000 0.787234 0.000000 0.000000 0.319149 0.000000 0.680851 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.510638 0.000000 0.489362 0.446809 0.000000 0.553191 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCAYRTG MEME-5 regular expression -------------------------------------------------------------------------------- [GA][TC]CA[CT][GA]TG -------------------------------------------------------------------------------- Time 17.09 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:49310026-49310106 2.80e-04 1_[+1(3.36e-05)]_61_[+2(9.44e-05)]_\ 2 chr19:49362011-49362091 1.79e-01 80 chr19:49416528-49416608 6.99e-03 69_[+2(3.37e-05)]_3 chr19:55831280-55831360 1.87e-03 5_[+3(5.20e-05)]_54_[+2(3.37e-05)]_\ 5 chr19:49486854-49486934 7.66e-03 66_[+2(3.37e-05)]_6 chr19:54682365-54682445 1.34e-02 66_[+2(4.78e-05)]_6 chr19:48922673-48922753 5.60e-05 [+1(1.39e-05)]_[+3(1.89e-05)]_64 chr1:154979441-154979521 1.10e-05 9_[+1(3.36e-05)]_35_[+2(3.37e-05)]_\ [+4(2.92e-05)]_12 chr19:55709049-55709129 1.03e-04 1_[+1(8.75e-05)]_63_[+2(5.73e-05)] chr19:54480863-54480943 3.72e-05 [+1(3.36e-05)]_60_[+2(3.37e-05)]_4 chr19:54411496-54411576 2.73e-03 59_[+2(3.37e-05)]_[+4(6.82e-05)]_5 chr19:55816992-55817072 5.38e-05 2_[+1(8.75e-05)]_[+3(1.89e-05)]_51_\ [+2(5.73e-05)]_3 chr11:46134684-46134764 8.54e-05 10_[+3(1.89e-05)]_44_[+2(8.05e-05)]_\ 10 chr17:7094940-7095020 1.76e-05 64_[+2(3.37e-05)]_[+4(2.92e-05)] chr19:49013936-49014016 1.42e-02 66_[+2(3.37e-05)]_6 chr19:55815809-55815889 7.03e-03 62_[+2(3.37e-05)]_[+4(9.12e-05)]_2 chr19:49385137-49385217 1.80e-04 3_[+1(1.39e-05)]_61_[+2(4.78e-05)] chr17:40559668-40559748 1.98e-06 24_[+3(1.89e-05)]_28_[+2(8.05e-05)]_\ [+4(6.82e-05)]_4 chr19:54396426-54396506 2.36e-05 [+1(8.75e-05)]_[+3(3.28e-05)]_54_\ [+2(9.84e-06)]_2 chr2:220150936-220151016 6.14e-01 80 chr19:49248612-49248692 3.78e-02 66_[+2(3.37e-05)]_6 chr19:49228256-49228336 3.69e-05 3_[+3(5.20e-05)]_52_[+2(3.37e-05)]_\ [+4(9.12e-05)]_1 chr19:51142563-51142643 4.68e-03 64_[+2(3.37e-05)]_8 chr19:49404473-49404553 1.06e-02 80 chr19:48907010-48907090 1.54e-03 19_[+2(4.78e-05)]_[+4(6.82e-05)]_45 chr19:50651539-50651619 1.16e-03 3_[+1(1.39e-05)]_[+3(3.28e-05)]_61 chr1:10706560-10706640 3.03e-01 80 chr19:55690510-55690590 2.46e-03 65_[+2(3.37e-05)]_7 chr19:507893-507973 1.57e-02 59_[+2(3.37e-05)]_13 chr7:20257099-20257179 1.38e-01 80 chr6:31866308-31866388 6.38e-04 37_[+4(3.85e-05)]_26_[+2(9.84e-06)]_\ 1 chr7:1465366-1465446 1.28e-04 6_[+1(1.39e-05)]_66 chr19:54382692-54382772 3.87e-03 71_[+3(3.28e-05)]_1 chr19:49148180-49148260 1.31e-05 3_[+1(3.36e-05)]_[+3(1.89e-05)]_53_\ [+2(3.37e-05)] chr8:82755020-82755100 5.65e-07 6_[+1(1.39e-05)]_[+3(3.28e-05)]_42_\ [+2(8.05e-05)]_8 chr6:10147338-10147418 6.48e-03 13_[+3(5.20e-05)]_27_[+3(5.20e-05)]_\ 24 chr17:7358812-7358892 1.56e-03 4_[+1(8.75e-05)]_[+3(3.28e-05)]_60 chr15:63481580-63481660 2.16e-03 20_[+1(8.75e-05)]_52 chr19:46027160-46027240 1.95e-04 5_[+1(4.80e-05)]_[+3(3.28e-05)]_59 chr11:919198-919278 1.62e-04 60_[+2(3.37e-05)]_[+4(9.35e-06)]_4 chr19:49017221-49017301 8.74e-03 35_[+4(2.92e-05)]_22_[+4(2.92e-05)]_\ 7 chr1:243418776-243418856 1.55e-03 11_[+1(8.75e-05)]_61 chr17:7118414-7118494 2.78e-03 68_[+2(3.37e-05)]_4 chr19:49479589-49479669 1.53e-03 12_[+3(3.28e-05)]_50_[+2(3.37e-05)]_\ 2 chr19:49422139-49422219 1.90e-03 5_[+1(3.36e-05)]_[+3(6.52e-05)]_20_\ [+3(5.20e-05)]_31 chr19:7616357-7616437 2.02e-02 55_[+2(3.37e-05)]_17 chr16:33569512-33569592 6.72e-07 28_[+5(5.56e-05)]_24_[+2(3.37e-05)]_\ [+4(9.35e-06)]_4 chr16:68482588-68482668 6.72e-02 25_[+2(8.05e-05)]_47 chr1:22755262-22755342 4.31e-06 15_[+1(1.39e-05)]_[+3(1.89e-05)]_49 chr19:51963844-51963924 6.69e-04 14_[+1(1.39e-05)]_[+3(3.28e-05)]_50 chr12:104323504-10432358 1.16e-02 80 chr14:24701754-24701834 3.04e-04 19_[+1(3.36e-05)]_38_[+2(3.37e-05)]_\ 7 chr19:49224354-49224434 2.18e-02 80 chr19:50163163-50163243 1.36e-06 4_[+1(3.36e-05)]_50_[+2(3.37e-05)]_\ [+4(1.60e-05)]_2 chr17:19912578-19912658 8.04e-03 4_[+1(3.36e-05)]_68 chr19:55677437-55677517 5.09e-03 7_[+1(4.80e-05)]_65 chr20:49084694-49084774 6.96e-05 10_[+1(1.39e-05)]_[+3(9.09e-05)]_54 chrX:47050071-47050151 1.52e-03 80 chr16:58664412-58664492 5.83e-03 80 chr4:79575005-79575085 2.33e-04 19_[+5(5.56e-05)]_32_[+4(1.60e-05)]_\ 13 chr14:82000454-82000534 1.72e-07 15_[+1(1.39e-05)]_[+3(3.28e-05)]_41_\ [+4(9.12e-05)] chr9:72435530-72435610 1.25e-05 6_[+3(5.20e-05)]_54_[+2(3.37e-05)]_\ 4 chr16:30908459-30908539 1.56e-04 14_[+1(1.39e-05)]_58 chr20:750599-750679 9.19e-04 3_[+1(1.39e-05)]_[+3(9.09e-05)]_61 chr1:47799901-47799981 4.50e-02 80 chr2:27319257-27319337 2.46e-02 52_[+2(4.78e-05)]_20 chr5:131526030-131526110 1.22e-03 4_[+1(1.39e-05)]_68 chr19:49250485-49250565 9.82e-03 4_[+1(3.36e-05)]_68 chr15:79165113-79165193 6.93e-01 80 chr19:50836831-50836911 1.69e-02 1_[+1(3.36e-05)]_71 chr8:124054105-124054185 4.42e-04 2_[+3(1.89e-05)]_61_[+4(6.82e-05)]_\ 1 chr19:47942188-47942268 6.44e-03 41_[+1(1.39e-05)]_[+3(9.09e-05)]_23 chr17:77702489-77702569 1.11e-05 28_[+5(5.56e-05)]_24_[+2(3.37e-05)]_\ [+4(9.35e-06)]_4 chr9:131965178-131965258 2.65e-02 65_[+2(3.37e-05)]_7 chr19:4304532-4304612 1.25e-02 25_[+1(1.39e-05)]_47 chr6:157801086-157801166 7.60e-02 26_[+4(9.12e-05)]_46 chr6:43215026-43215106 2.22e-03 57_[+2(3.37e-05)]_[+4(6.82e-05)]_7 chr19:45988712-45988792 4.90e-05 2_[+1(8.75e-05)]_[+3(1.89e-05)]_53_\ [+2(3.37e-05)]_1 chr12:861520-861600 1.23e-02 2_[+1(3.36e-05)]_70 chr5:178157717-178157797 3.32e-03 20_[+2(3.37e-05)]_52 chr19:40697262-40697342 3.36e-03 29_[+1(3.36e-05)]_[+3(5.20e-05)]_35 chr16:46918130-46918210 1.95e-03 13_[+2(8.05e-05)]_59 chr7:150689947-150690027 9.45e-04 2_[+1(4.80e-05)]_70 chr19:42463532-42463612 1.04e-03 37_[+4(3.85e-05)]_14_[+2(3.37e-05)]_\ [+4(2.92e-05)]_5 chr9:138853253-138853333 2.50e-02 80 chr20:40322142-40322222 1.79e-01 80 chr11:69614414-69614494 6.81e-05 4_[+1(1.39e-05)]_68 chr1:31327130-31327210 3.86e-05 28_[+5(3.67e-05)]_32_[+4(9.35e-06)]_\ 4 chr2:38892990-38893070 8.00e-02 80 chr16:58426723-58426803 8.90e-05 61_[+2(5.73e-05)]_[+4(1.60e-05)]_3 chr19:49262478-49262558 9.52e-02 69_[+2(4.78e-05)]_3 chr10:111985587-11198566 5.10e-02 80 chr10:72288716-72288796 1.98e-06 10_[+5(8.59e-05)]_24_[+2(3.37e-05)]_\ [+4(9.35e-06)]_22 chr1:205744604-205744684 1.07e-04 3_[+1(1.39e-05)]_61_[+2(3.37e-05)] chr16:29687592-29687672 1.54e-04 39_[+2(3.37e-05)]_[+4(5.51e-05)]_25 chr19:57946550-57946630 2.76e-03 45_[+1(1.39e-05)]_27 chr12:110151311-11015139 6.77e-03 [+1(4.80e-05)]_72 chr6:14800251-14800331 3.55e-04 25_[+1(1.39e-05)]_47 chr4:7075465-7075545 2.22e-05 26_[+5(3.67e-05)]_23_[+2(3.37e-05)]_\ [+4(1.60e-05)]_7 chr19:41084515-41084595 5.26e-03 80 chr16:53468290-53468370 1.76e-03 13_[+3(1.89e-05)]_59 chr2:232646292-232646372 9.52e-04 7_[+1(1.39e-05)]_[+3(1.89e-05)]_57 chr9:132346484-132346564 4.44e-05 10_[+1(1.39e-05)]_[+3(1.89e-05)]_54 chr1:20767411-20767491 1.95e-06 33_[+5(3.67e-05)]_23_[+2(3.37e-05)]_\ [+4(9.35e-06)] chr11:60681311-60681391 2.61e-03 1_[+1(1.39e-05)]_36_[+1(8.75e-05)]_\ 27 chr3:61235753-61235833 3.33e-03 60_[+3(5.20e-05)]_12 chr19:55708326-55708406 7.82e-04 1_[+1(3.36e-05)]_71 chr1:224544442-224544522 9.48e-04 3_[+3(1.89e-05)]_39_[+1(3.36e-05)]_\ 22 chr16:84300112-84300192 2.14e-05 6_[+1(1.39e-05)]_[+3(9.09e-05)]_58 chr9:97021486-97021566 5.28e-02 80 chr6:52929627-52929707 7.10e-03 2_[+1(4.80e-05)]_70 chr13:26827953-26828033 7.22e-02 80 chr2:217277069-217277149 4.07e-03 20_[+1(4.80e-05)]_[+3(3.28e-05)]_44 chr22:22020217-22020297 1.01e-02 35_[+3(1.89e-05)]_37 chr20:45779474-45779554 1.47e-05 64_[+2(3.37e-05)]_[+4(9.35e-06)] chr1:17338459-17338539 5.37e-02 80 chr1:243419203-243419283 1.34e-04 8_[+2(9.84e-06)]_56_[+1(3.36e-05)] chr10:73083337-73083417 9.02e-06 50_[+2(3.37e-05)]_[+4(9.35e-06)]_14 chr3:69788447-69788527 1.93e-03 28_[+4(1.60e-05)]_44 chr1:151584374-151584454 4.24e-01 80 chr1:18779222-18779302 7.90e-06 25_[+5(3.67e-05)]_25_[+2(3.37e-05)]_\ 14 chr18:9913578-9913658 2.10e-01 80 chr6:6890948-6891028 7.68e-04 62_[+2(3.37e-05)]_[+4(3.85e-05)]_2 chr21:35340754-35340834 1.22e-06 25_[+5(3.67e-05)]_23_[+2(3.37e-05)]_\ [+4(9.35e-06)]_8 chr16:74729864-74729944 3.66e-06 6_[+1(3.36e-05)]_[+3(9.09e-05)]_58 chr2:39005282-39005362 9.51e-02 4_[+1(4.80e-05)]_68 chr19:48866427-48866507 1.76e-03 6_[+1(3.36e-05)]_[+3(5.20e-05)]_58 chr8:67525733-67525813 5.33e-02 80 chr13:41837989-41838069 2.94e-03 22_[+2(3.37e-05)]_[+4(5.51e-05)]_42 chr10:38383176-38383256 8.26e-03 39_[+2(3.37e-05)]_33 chr20:52535657-52535737 7.71e-02 68_[+2(3.37e-05)]_4 chr19:36208416-36208496 1.01e-04 63_[+4(9.12e-05)]_9 chr19:41571013-41571093 3.82e-03 2_[+1(1.39e-05)]_70 chr19:17721334-17721414 2.81e-06 5_[+1(1.39e-05)]_[+3(1.89e-05)]_20_\ [+5(9.67e-06)]_31 chr19:44809190-44809270 8.32e-03 15_[+3(3.28e-05)]_39_[+1(8.75e-05)]_\ [+3(3.28e-05)]_2 chr19:10028075-10028155 2.92e-03 9_[+1(1.39e-05)]_63 chr3:14361228-14361308 1.24e-04 20_[+1(1.39e-05)]_52 chr19:19887278-19887358 3.59e-03 38_[+1(3.36e-05)]_[+3(1.89e-05)]_26 chr16:19535077-19535157 7.12e-02 80 chr6:44101535-44101615 6.91e-03 37_[+2(3.37e-05)]_35 chr19:51152938-51153018 2.64e-03 2_[+1(1.39e-05)]_45_[+1(1.39e-05)]_\ 17 chr1:155113005-155113085 5.24e-04 51_[+2(3.37e-05)]_21 chr12:88535958-88536038 1.22e-02 80 chr19:47049933-47050013 1.03e-05 19_[+5(2.31e-05)]_24_[+2(3.37e-05)]_\ 21 chr13:31736508-31736588 8.50e-03 38_[+4(2.92e-05)]_34 chr13:41768695-41768775 1.93e-01 80 chr2:86332688-86332768 1.12e-02 3_[+3(1.89e-05)]_69 chr19:6812068-6812148 2.95e-05 16_[+5(3.67e-05)]_24_[+2(3.37e-05)]_\ 24 chr2:44001101-44001181 5.72e-03 9_[+1(1.39e-05)]_63 chr15:76461555-76461635 8.46e-06 46_[+2(3.37e-05)]_[+4(9.35e-06)]_18 chr2:36845625-36845705 1.06e-04 19_[+1(1.39e-05)]_27_[+5(5.56e-05)]_\ 18 chr12:124594394-12459447 1.33e-04 17_[+1(1.39e-05)]_55 chr12:56710133-56710213 4.31e-03 4_[+1(3.36e-05)]_[+3(5.20e-05)]_33_\ [+1(8.75e-05)]_19 chr9:134955269-134955349 8.47e-03 46_[+2(3.37e-05)]_26 chr14:73493967-73494047 1.22e-02 22_[+1(3.36e-05)]_50 chr19:44598415-44598495 5.98e-03 8_[+4(9.12e-05)]_64 chr22:39886319-39886399 4.60e-05 26_[+5(3.67e-05)]_32_[+4(9.35e-06)]_\ 6 chr10:43048322-43048402 1.92e-01 80 chr19:38397741-38397821 1.49e-01 80 chr16:31119649-31119729 6.24e-03 14_[+1(3.36e-05)]_[+3(5.20e-05)]_50 chr19:49947081-49947161 2.03e-03 49_[+2(4.78e-05)]_[+4(3.85e-05)]_15 chr1:147142675-147142755 3.47e-03 42_[+1(3.36e-05)]_30 chr2:10552683-10552763 2.02e-05 23_[+5(3.67e-05)]_24_[+2(3.37e-05)]_\ 17 chrX:48980199-48980279 2.23e-01 80 chr6:41703385-41703465 1.01e-03 6_[+3(9.09e-05)]_27_[+4(3.85e-05)]_\ 31 chr17:46908255-46908335 1.75e-04 28_[+1(8.75e-05)]_[+3(1.89e-05)]_36 chr6:15245641-15245721 2.32e-04 35_[+2(9.84e-06)]_37 chr19:1241636-1241716 1.96e-03 80 chr19:59086702-59086782 2.53e-02 15_[+1(1.39e-05)]_57 chr10:103892664-10389274 7.30e-03 59_[+4(9.35e-06)]_13 chr1:234812121-234812201 5.01e-03 33_[+4(3.85e-05)]_39 chr10:104262615-10426269 5.37e-03 21_[+2(5.73e-05)]_51 chr19:13512344-13512424 2.14e-04 12_[+1(1.39e-05)]_[+3(9.09e-05)]_52 chr6:33783805-33783885 7.26e-03 59_[+2(3.37e-05)]_13 chr20:25677517-25677597 1.01e-01 80 chr11:73661963-73662043 2.43e-03 38_[+1(3.36e-05)]_34 chr3:50397061-50397141 1.66e-03 18_[+1(8.75e-05)]_[+3(5.20e-05)]_46 chr16:31045650-31045730 6.05e-03 80 chr19:58838285-58838365 4.19e-05 11_[+1(1.39e-05)]_[+3(1.89e-05)]_53 chr17:4634602-4634682 8.34e-03 10_[+2(3.37e-05)]_62 chr20:49116086-49116166 9.57e-06 20_[+5(9.67e-06)]_23_[+2(3.37e-05)]_\ [+4(9.35e-06)]_13 chr4:2420551-2420631 3.44e-02 72_[+2(3.37e-05)] chr20:45810098-45810178 2.30e-05 27_[+5(5.56e-05)]_24_[+2(3.37e-05)]_\ [+4(9.12e-05)]_5 chr3:50388511-50388591 5.45e-03 65_[+2(5.73e-05)]_7 chr16:15150037-15150117 1.88e-02 7_[+4(9.12e-05)]_65 chr8:140688118-140688198 6.32e-05 9_[+1(1.39e-05)]_27_[+5(8.59e-05)]_\ 28 chr5:178286879-178286959 6.94e-03 18_[+1(8.75e-05)]_[+3(3.28e-05)]_46 chr12:32832073-32832153 3.01e-03 17_[+1(3.36e-05)]_[+3(1.89e-05)]_47 chr12:119667748-11966782 8.56e-05 23_[+1(1.39e-05)]_[+3(9.09e-05)]_19_\ [+5(8.59e-05)]_14 chr21:15755514-15755594 3.49e-03 9_[+2(3.37e-05)]_63 chr9:133003018-133003098 1.41e-04 7_[+1(1.39e-05)]_[+3(9.09e-05)]_57 chr9:132079961-132080041 1.01e-05 11_[+3(9.09e-05)]_19_[+5(3.67e-05)]_\ 34 chr11:134123334-13412341 3.19e-03 42_[+1(3.36e-05)]_30 chr12:121488680-12148876 7.48e-06 60_[+2(3.37e-05)]_[+4(9.35e-06)]_4 chr7:76751692-76751772 5.91e-05 10_[+4(3.85e-05)]_45_[+3(5.20e-05)]_\ 9 chr2:54950535-54950615 7.19e-05 10_[+2(8.05e-05)]_44_[+1(8.75e-05)]_\ [+3(5.20e-05)]_2 chr14:81408123-81408203 8.24e-04 12_[+2(3.37e-05)]_[+4(9.12e-05)]_52 chr6:6737557-6737637 9.14e-03 42_[+2(8.05e-05)]_[+4(6.82e-05)]_22 chr16:87009105-87009185 7.51e-05 17_[+1(3.36e-05)]_26_[+5(2.31e-05)]_\ 21 chr19:14743255-14743335 6.19e-04 5_[+3(9.09e-05)]_19_[+5(8.59e-05)]_\ 15_[+2(8.05e-05)]_17 chr21:35402523-35402603 8.13e-06 12_[+5(9.67e-06)]_24_[+2(3.37e-05)]_\ [+4(1.60e-05)]_20 chr11:64456045-64456125 3.59e-04 39_[+1(3.36e-05)]_[+3(1.89e-05)]_25 chr6:167000380-167000460 2.93e-05 13_[+1(1.39e-05)]_27_[+5(2.31e-05)]_\ 24 chr12:54582820-54582900 2.87e-01 80 chr2:88844831-88844911 1.40e-04 8_[+1(1.39e-05)]_40_[+3(9.09e-05)]_\ 16 chr20:48732481-48732561 5.92e-03 37_[+4(4.82e-05)]_19_[+2(3.37e-05)]_\ 8 chr1:15288457-15288537 9.64e-05 25_[+5(2.31e-05)]_24_[+2(3.37e-05)]_\ [+4(9.12e-05)]_7 chr1:156308547-156308627 2.54e-04 20_[+2(3.37e-05)]_[+4(9.35e-06)]_36_\ [+2(3.37e-05)] chr14:68286393-68286473 1.11e-03 5_[+1(1.39e-05)]_[+3(1.89e-05)]_59 chr16:4321887-4321967 1.79e-01 80 chr11:107436426-10743650 3.06e-03 37_[+1(1.39e-05)]_35 chr17:38083866-38083946 3.26e-03 46_[+2(3.37e-05)]_[+4(9.12e-05)]_18 chr22:33300165-33300245 1.16e-04 11_[+1(1.39e-05)]_[+3(1.89e-05)]_53 chr2:133104956-133105036 3.84e-02 80 chr1:247095514-247095594 1.20e-01 80 chr3:13933300-13933380 2.94e-04 27_[+1(3.36e-05)]_[+3(1.89e-05)]_37 chr1:156052280-156052360 2.53e-02 56_[+4(9.12e-05)]_16 chr8:145159789-145159869 1.30e-04 54_[+2(5.73e-05)]_18 chr2:180872037-180872117 9.68e-02 49_[+4(5.51e-05)]_23 chr11:46271172-46271252 1.63e-01 80 chr17:40075335-40075415 8.41e-03 53_[+2(8.05e-05)]_19 chr2:136288409-136288489 5.87e-03 80 chr19:50501074-50501154 1.17e-03 80 chr10:71754201-71754281 7.03e-07 28_[+5(3.67e-05)]_24_[+2(3.37e-05)]_\ [+4(9.35e-06)]_4 chr12:49449932-49450012 5.66e-03 24_[+2(3.37e-05)]_[+4(6.82e-05)]_40 chr17:21226434-21226514 2.17e-06 29_[+5(3.67e-05)]_24_[+2(3.37e-05)]_\ [+4(9.35e-06)]_3 chr5:153211681-153211761 6.34e-06 15_[+1(1.39e-05)]_[+3(1.89e-05)]_49 chr17:17653421-17653501 5.25e-05 23_[+5(2.31e-05)]_24_[+2(3.37e-05)]_\ [+4(9.12e-05)]_9 chr16:30103254-30103334 2.31e-02 5_[+1(8.75e-05)]_67 chr3:126422975-126423055 2.94e-01 80 chr19:49223922-49224002 4.34e-03 38_[+1(3.36e-05)]_[+3(3.28e-05)]_26 chr4:6374774-6374854 8.69e-06 23_[+1(1.39e-05)]_[+3(1.89e-05)]_41 chr19:49835010-49835090 6.16e-05 21_[+5(3.67e-05)]_25_[+2(3.37e-05)]_\ 18 chr9:130965520-130965600 2.20e-01 80 chr16:9147099-9147179 9.94e-05 24_[+5(5.56e-05)]_24_[+2(3.37e-05)]_\ [+4(9.12e-05)]_8 chr10:38265598-38265678 1.39e-02 25_[+3(3.28e-05)]_47 chr18:60382251-60382331 4.27e-03 25_[+2(8.05e-05)]_[+4(9.12e-05)]_39 chr2:99952928-99953008 9.58e-02 65_[+2(3.37e-05)]_7 chr19:4180275-4180355 2.85e-04 10_[+1(1.39e-05)]_[+3(1.89e-05)]_54 chr19:52097740-52097820 2.11e-01 80 chr19:37569243-37569323 3.72e-03 35_[+1(1.39e-05)]_37 chr9:101172675-101172755 4.28e-06 16_[+1(1.39e-05)]_[+3(3.28e-05)]_37_\ [+2(4.78e-05)]_3 chr16:67700644-67700724 1.94e-02 72_[+4(9.12e-05)] chr7:152887689-152887769 2.27e-03 12_[+1(3.36e-05)]_[+3(3.28e-05)]_52 chr20:62694375-62694455 1.63e-05 16_[+1(8.75e-05)]_[+3(5.20e-05)]_23_\ [+2(3.37e-05)]_17 chr7:5553431-5553511 7.72e-01 80 chr17:76250656-76250736 3.98e-03 2_[+2(3.37e-05)]_62_[+2(3.37e-05)] chr2:2617313-2617393 2.71e-03 7_[+1(1.39e-05)]_65 chr7:102389313-102389393 4.92e-03 25_[+2(3.37e-05)]_47 chr11:66138872-66138952 6.01e-05 10_[+1(3.36e-05)]_40_[+2(9.84e-06)]_\ 14 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************