******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/SIRT6.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr22:23145037-23145117 1.0000 80 chr15:22984729-22984809 1.0000 80 chr2:44046093-44046173 1.0000 80 chr19:52552573-52552653 1.0000 80 chr3:40378357-40378437 1.0000 80 chr15:30107728-30107808 1.0000 80 chr9:124041193-124041273 1.0000 80 chr6:36793379-36793459 1.0000 80 chr19:6276547-6276627 1.0000 80 chrX:154047321-154047401 1.0000 80 chr3:169663254-169663334 1.0000 80 chr1:150900326-150900406 1.0000 80 chr1:233809914-233809994 1.0000 80 chr16:9391486-9391566 1.0000 80 chr5:54082270-54082350 1.0000 80 chr15:85458375-85458455 1.0000 80 chr16:87498422-87498502 1.0000 80 chr6:150400034-150400114 1.0000 80 chr2:203815465-203815545 1.0000 80 chr3:57134209-57134289 1.0000 80 chr7:44999327-44999407 1.0000 80 chr7:74074274-74074354 1.0000 80 chr15:40373175-40373255 1.0000 80 chr2:39444141-39444221 1.0000 80 chr7:44331132-44331212 1.0000 80 chr1:16521728-16521808 1.0000 80 chr1:11990008-11990088 1.0000 80 chr8:96113881-96113961 1.0000 80 chr21:38818909-38818989 1.0000 80 chr1:22448203-22448283 1.0000 80 chr1:100905818-100905898 1.0000 80 chr11:5266072-5266152 1.0000 80 chr8:107072808-107072888 1.0000 80 chr19:37701560-37701640 1.0000 80 chr1:201278740-201278820 1.0000 80 chr3:196377932-196378012 1.0000 80 chr2:223699991-223700071 1.0000 80 chr3:45615758-45615838 1.0000 80 chr6:138132685-138132765 1.0000 80 chr8:53625752-53625832 1.0000 80 chr5:139570283-139570363 1.0000 80 chr2:75089565-75089645 1.0000 80 chr8:28745629-28745709 1.0000 80 chr20:47654644-47654724 1.0000 80 chr11:12136234-12136314 1.0000 80 chr6:160403068-160403148 1.0000 80 chr7:142661732-142661812 1.0000 80 chr9:115819002-115819082 1.0000 80 chr2:131862102-131862182 1.0000 80 chr1:150936859-150936939 1.0000 80 chr1:150902487-150902567 1.0000 80 chr17:25659665-25659745 1.0000 80 chr17:4625073-4625153 1.0000 80 chr15:89019956-89020036 1.0000 80 chr12:104613960-10461404 1.0000 80 chr5:179989878-179989958 1.0000 80 chr9:134280055-134280135 1.0000 80 chr7:132915520-132915600 1.0000 80 chr19:52430343-52430423 1.0000 80 chr6:126375642-126375722 1.0000 80 chr6:14890540-14890620 1.0000 80 chrX:129728526-129728606 1.0000 80 chr1:183885329-183885409 1.0000 80 chr7:150904259-150904339 1.0000 80 chr3:151593707-151593787 1.0000 80 chr8:29088140-29088220 1.0000 80 chr13:114451305-11445138 1.0000 80 chr5:95161425-95161505 1.0000 80 chr19:52511483-52511563 1.0000 80 chr12:116561545-11656162 1.0000 80 chr1:150923849-150923929 1.0000 80 chr17:42236991-42237071 1.0000 80 chr1:154293455-154293535 1.0000 80 chr5:127374501-127374581 1.0000 80 chr5:148846109-148846189 1.0000 80 chr19:39894602-39894682 1.0000 80 chr7:129649791-129649871 1.0000 80 chrX:153236495-153236575 1.0000 80 chr1:35896828-35896908 1.0000 80 chr18:9829254-9829334 1.0000 80 chr4:170679196-170679276 1.0000 80 chr8:124526601-124526681 1.0000 80 chr6:105335387-105335467 1.0000 80 chr15:40674999-40675079 1.0000 80 chr16:87756955-87757035 1.0000 80 chr19:52408314-52408394 1.0000 80 chr11:117878481-11787856 1.0000 80 chr20:60721316-60721396 1.0000 80 chr19:37663699-37663779 1.0000 80 chr19:33161022-33161102 1.0000 80 chr1:114996217-114996297 1.0000 80 chr20:40322134-40322214 1.0000 80 chr8:82754704-82754784 1.0000 80 chr1:27339436-27339516 1.0000 80 chr8:27795395-27795475 1.0000 80 chr8:102064084-102064164 1.0000 80 chr19:52490148-52490228 1.0000 80 chr2:46553563-46553643 1.0000 80 chr16:27760337-27760417 1.0000 80 chr1:235254118-235254198 1.0000 80 chr9:117247303-117247383 1.0000 80 chr22:43500128-43500208 1.0000 80 chr6:157130279-157130359 1.0000 80 chr12:93623333-93623413 1.0000 80 chr10:112617438-11261751 1.0000 80 chr2:54801752-54801832 1.0000 80 chr19:52430547-52430627 1.0000 80 chr19:49379707-49379787 1.0000 80 chr21:44457108-44457188 1.0000 80 chr10:48412264-48412344 1.0000 80 chr17:42767745-42767825 1.0000 80 chr12:95571-95651 1.0000 80 chr17:80297098-80297178 1.0000 80 chr17:27503764-27503844 1.0000 80 chr1:180086556-180086636 1.0000 80 chr1:109159765-109159845 1.0000 80 chr15:56332815-56332895 1.0000 80 chr10:5724034-5724114 1.0000 80 chr16:85075889-85075969 1.0000 80 chr15:29260993-29261073 1.0000 80 chr6:43811142-43811222 1.0000 80 chr8:144973687-144973767 1.0000 80 chr7:157180026-157180106 1.0000 80 chr17:72956980-72957060 1.0000 80 chr1:230296861-230296941 1.0000 80 chr20:47470641-47470721 1.0000 80 chr13:26821857-26821937 1.0000 80 chr10:70314951-70315031 1.0000 80 chr3:130791159-130791239 1.0000 80 chr8:102049427-102049507 1.0000 80 chr20:5037775-5037855 1.0000 80 chr6:154841591-154841671 1.0000 80 chr9:96431018-96431098 1.0000 80 chr22:41050645-41050725 1.0000 80 chr16:11227288-11227368 1.0000 80 chr14:23298978-23299058 1.0000 80 chr2:170972511-170972591 1.0000 80 chr9:95640404-95640484 1.0000 80 chr16:31547141-31547221 1.0000 80 chr6:158034139-158034219 1.0000 80 chr1:249120253-249120333 1.0000 80 chr1:40596746-40596826 1.0000 80 chr2:234608944-234609024 1.0000 80 chr19:48763075-48763155 1.0000 80 chr6:155406933-155407013 1.0000 80 chr14:69658092-69658172 1.0000 80 chr2:20289672-20289752 1.0000 80 chr6:43905231-43905311 1.0000 80 chr6:25974297-25974377 1.0000 80 chr1:43871011-43871091 1.0000 80 chr6:11393376-11393456 1.0000 80 chr7:86741350-86741430 1.0000 80 chr1:150935764-150935844 1.0000 80 chr7:86740295-86740375 1.0000 80 chr12:13080339-13080419 1.0000 80 chr11:108094340-10809442 1.0000 80 chr5:180671048-180671128 1.0000 80 chr15:43513494-43513574 1.0000 80 chr10:4983933-4984013 1.0000 80 chr11:78003344-78003424 1.0000 80 chr20:524573-524653 1.0000 80 chr17:33213979-33214059 1.0000 80 chr11:59328612-59328692 1.0000 80 chr8:125663476-125663556 1.0000 80 chr7:106407634-106407714 1.0000 80 chr10:126109573-12610965 1.0000 80 chr7:106593321-106593401 1.0000 80 chr6:140087137-140087217 1.0000 80 chr3:194030801-194030881 1.0000 80 chr8:68022159-68022239 1.0000 80 chr6:43766781-43766861 1.0000 80 chrX:107800936-107801016 1.0000 80 chr12:102799860-10279994 1.0000 80 chr1:59753885-59753965 1.0000 80 chr19:52074286-52074366 1.0000 80 chr17:33212316-33212396 1.0000 80 chr6:15897337-15897417 1.0000 80 chr6:167364572-167364652 1.0000 80 chr18:3713365-3713445 1.0000 80 chr3:128444841-128444921 1.0000 80 chr19:14385742-14385822 1.0000 80 chr22:22139071-22139151 1.0000 80 chr19:16771143-16771223 1.0000 80 chr3:71257528-71257608 1.0000 80 chr9:140406327-140406407 1.0000 80 chr6:157814412-157814492 1.0000 80 chr12:40493397-40493477 1.0000 80 chr15:82234677-82234757 1.0000 80 chr8:2965634-2965714 1.0000 80 chr6:33290826-33290906 1.0000 80 chr5:159435987-159436067 1.0000 80 chr16:84627679-84627759 1.0000 80 chr8:48572477-48572557 1.0000 80 chr11:58537751-58537831 1.0000 80 chr2:145277815-145277895 1.0000 80 chr1:8064930-8065010 1.0000 80 chr1:247267783-247267863 1.0000 80 chr7:73265947-73266027 1.0000 80 chr9:138876762-138876842 1.0000 80 chr6:31794833-31794913 1.0000 80 chr10:81962997-81963077 1.0000 80 chr1:54665605-54665685 1.0000 80 chr7:30193997-30194077 1.0000 80 chr1:211786927-211787007 1.0000 80 chr11:75525851-75525931 1.0000 80 chr5:171381009-171381089 1.0000 80 chr16:89282853-89282933 1.0000 80 chr11:64653195-64653275 1.0000 80 chr5:67994143-67994223 1.0000 80 chr18:3603154-3603234 1.0000 80 chr16:85368634-85368714 1.0000 80 chr21:34588039-34588119 1.0000 80 chr22:22146169-22146249 1.0000 80 chr12:45667701-45667781 1.0000 80 chr19:39749083-39749163 1.0000 80 chr7:127478184-127478264 1.0000 80 chr12:76328409-76328489 1.0000 80 chr19:36545315-36545395 1.0000 80 chr13:22562125-22562205 1.0000 80 chr15:73767276-73767356 1.0000 80 chr3:193853849-193853929 1.0000 80 chr2:210852885-210852965 1.0000 80 chr9:134180518-134180598 1.0000 80 chr11:33060954-33061034 1.0000 80 chr1:165812202-165812282 1.0000 80 chr3:170483356-170483436 1.0000 80 chr10:30479923-30480003 1.0000 80 chr10:85960906-85960986 1.0000 80 chr18:2571240-2571320 1.0000 80 chr1:226189852-226189932 1.0000 80 chr8:135844720-135844800 1.0000 80 chrX:106985198-106985278 1.0000 80 chr7:99291299-99291379 1.0000 80 chr2:152683429-152683509 1.0000 80 chr8:103666318-103666398 1.0000 80 chr4:122712282-122712362 1.0000 80 chr5:64777798-64777878 1.0000 80 chr6:35311374-35311454 1.0000 80 chr7:102624254-102624334 1.0000 80 chr1:25583239-25583319 1.0000 80 chr10:135056541-13505662 1.0000 80 chr7:73265337-73265417 1.0000 80 chr1:202974927-202975007 1.0000 80 chr1:31944558-31944638 1.0000 80 chr4:109541578-109541658 1.0000 80 chr6:147217434-147217514 1.0000 80 chr5:67599709-67599789 1.0000 80 chr19:47633937-47634017 1.0000 80 chr2:38770185-38770265 1.0000 80 chr1:169162822-169162902 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_SIRT6/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/SIRT6.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.245 C 0.247 G 0.253 T 0.255 Background letter frequencies (from file dataset with add-one prior applied): A 0.245 C 0.247 G 0.253 T 0.255 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF KCACGTGM MEME-1 width = 8 sites = 141 llr = 1050 E-value = 9.5e-099 ******************************************************************************** -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:a:1::5 pos.-specific C 1a:9:::4 probability G 3:::81a1 matrix T 5::1:9:1 bits 2.0 * * 1.8 ** * 1.6 ** ** 1.4 *** ** Relative 1.2 ****** Entropy 1.0 ****** (10.7 bits) 0.8 ****** 0.6 ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCACGTGA consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:47633937-47634017 41 1.52e-05 GGACCCTCCG TCACGTGA CATGCAGTCG chr19:36545315-36545395 1 1.52e-05 . TCACGTGA CGAATGGGCC chr19:39749083-39749163 39 1.52e-05 attgataagg tcacgtga gtcacgtgtc chr5:171381009-171381089 12 1.52e-05 CAAACTCAAT TCACGTGA TCCTCACTGT chr1:54665605-54665685 64 1.52e-05 GCGCTTCACC TCACGTGA GGATTTTCC chr10:81962997-81963077 50 1.52e-05 ACCTCCCCAA TCACGTGA ACTAGGCATC chr1:247267783-247267863 19 1.52e-05 GATTGCGATC TCACGTGA GGCTGGATGA chr6:167364572-167364652 31 1.52e-05 actgataagg tcacgtga gtcacgtgtc chr6:15897337-15897417 31 1.52e-05 ACTTCTGGGG TCACGTGA GGCTTATGGT chr16:11227288-11227368 13 1.52e-05 GCAGGGTCAG TCACGTGA CCCAGAGCAC chr1:180086556-180086636 68 1.52e-05 aggcccattc tcacgtga ttgtg chr17:27503764-27503844 66 1.52e-05 TGCACGCTTC TCACGTGA CATTAGC chr16:27760337-27760417 20 1.52e-05 ACCGTTAGAG TCACGTGA CTGTGACAGT chr18:9829254-9829334 70 1.52e-05 actgtatgtg tcacgtga tga chr6:14890540-14890620 5 1.52e-05 atct tcacgtga catcctccct chr9:134280055-134280135 25 1.52e-05 TGCTGCCCTT TCACGTGA TAAAATGTCT chr15:89019956-89020036 59 1.52e-05 CAGATCACAG TCACGTGA ATTCTGCAAC chr17:25659665-25659745 66 1.52e-05 CAGATATTTG TCACGTGA ATGAGCC chr8:107072808-107072888 33 1.52e-05 tagtaaccag tcacgtga gcgcgtgctt chr21:38818909-38818989 37 1.52e-05 acgtgttacc tcacgtga acctcacaga chr1:16521728-16521808 55 1.52e-05 cctcctggca tcacgtga tgagaagcgc chr1:25583239-25583319 44 3.06e-05 CAGGAGGCCC TCACGTGC TTGACTTCTT chr21:34588039-34588119 45 3.06e-05 AGAAACCAGG TCACGTGC ATGTGGTTAA chrX:107800936-107801016 57 3.06e-05 TTTCTCTTTC TCACGTGC TGTCCAGGCT chr20:5037775-5037855 6 3.06e-05 agaca tcacgtgc agctgaatcc chr16:85075889-85075969 5 3.06e-05 CTAA TCACGTGC GGTCTGTGTG chr15:56332815-56332895 42 3.06e-05 CATAATAGCA TCACGTGC TGGCAAAGTG chr1:183885329-183885409 24 3.06e-05 CTGCTTTGCC TCACGTGC TTATAGAGTG chr6:160403068-160403148 22 3.06e-05 TGTGTCAAAC TCACGTGC TTCCCCAGCC chr16:9391486-9391566 10 3.06e-05 GATTCGAAA TCACGTGC CGCGACAAGC chr2:44046093-44046173 17 3.06e-05 ctccacgaag tcacgtgc GTCACAGCct chr22:23145037-23145117 47 3.06e-05 CCAGTAGAGC TCACGTGC AAAGGGTGTG chr11:75525851-75525931 38 4.57e-05 CCCGCCTCCT GCACGTGA CACCGGAGCC chr6:43766781-43766861 20 4.57e-05 GCCACGCATG GCACGTGA CAGCCAAGGA chr11:78003344-78003424 42 4.57e-05 TAGCCACAAG GCACGTGA GATTTGGTAT chr10:48412264-48412344 28 4.57e-05 GTGCTGGGAT GCACGTGA CTCAAGAGAG chr21:44457108-44457188 45 4.57e-05 TGACCAAGCA GCACGTGA AGACTGCACG chr1:27339436-27339516 27 4.57e-05 GTAGAGCTTT GCACGTGA GTCACTGTTC chr8:29088140-29088220 28 4.57e-05 CAGATTATGA GCACGTGA AGCTGGCGTG chr6:36793379-36793459 50 4.57e-05 AGCAGGGGCT GCACGTGA GACACCACTT chr15:30107728-30107808 28 4.57e-05 ACAATGCTGA GCACGTGA ATGCTTTCAG chr9:96431018-96431098 54 6.10e-05 GGAGCAGTGT GCACGTGC ACATGTGCCT chr7:157180026-157180106 22 6.10e-05 TGCAGCCATG GCACGTGC GGGAAAGCGG chr9:117247303-117247383 41 6.10e-05 GTGCTGAGGA GCACGTGC AACAGAGGTA chr6:105335387-105335467 47 6.10e-05 GGACAGTAAT GCACGTGC CCTCACCTCT chr7:129649791-129649871 9 6.10e-05 gactatag gcacgtgc caccacttct chr20:47654644-47654724 10 6.10e-05 ggattacag gcacgtgc caccatgccc chr1:11990008-11990088 36 6.10e-05 ACTGTCCACA GCACGTGC AGCACGTACC chr7:44999327-44999407 47 6.10e-05 GCGTGTGCCT GCACGTGC GGCCACAAGT chr3:57134209-57134289 34 6.10e-05 TTATTTTTCA GCACGTGC TGATCCACCA chr9:124041193-124041273 29 6.10e-05 ATGTGTGTGT GCACGTGC ACGTATGTGT chr10:135056541-13505662 27 7.68e-05 agtgggtgtg tcacgtgt gatgtgtgtg chr7:30193997-30194077 11 7.68e-05 ggccataggc tcacgtgt ttcttataga chr8:125663476-125663556 73 7.68e-05 CACCAGGCAG TCACGTGT chr6:158034139-158034219 67 7.68e-05 TCGGAGGGCC TCACGTGT GCCTCC chr1:230296861-230296941 58 7.68e-05 tccccagggc tcacgtgt gccttgtggt chr17:72956980-72957060 71 7.68e-05 CACCCCGTGC TCACGTGT CC chr22:43500128-43500208 47 7.68e-05 gtcaagcaag tcacgtgt ccacgtgaca chr17:42236991-42237071 44 7.68e-05 gtcaagcaag tcacgtgt ccacgtgatg chr5:179989878-179989958 73 9.15e-05 AGAACCACAC ACACGTGA chr5:54082270-54082350 27 9.15e-05 CTGAGATAGA ACACGTGA GTGCTGCCTG chr3:40378357-40378437 60 9.15e-05 gcatctgcca acacgtga gcaaacaagt chr1:202974927-202975007 23 1.21e-04 atctgggcgt acacgtgc aagtcaccag chr9:134180518-134180598 51 1.21e-04 acacttgcac acacgtgc atagcagcat chr12:102799860-10279994 11 1.21e-04 TCCCATGCAC ACACGTGC ACGGTGGAGG chr7:106593321-106593401 43 1.21e-04 TCAGCTCTGG TCACATGA GCAACACACC chr15:43513494-43513574 66 1.21e-04 AATAGAGAGA ACACGTGC ATCTGCA chr19:48763075-48763155 39 1.21e-04 attgataagg tcacatga gtcacgtttc chr15:29260993-29261073 29 1.21e-04 gcggaagcag acacgtgc agagggagga chr1:154293455-154293535 24 1.21e-04 CCTAGCCTAC ACACGTGC ACAGACACGT chr5:64777798-64777878 6 1.67e-04 GGTCG TCACGTGG AGGGGGAGGG chr1:226189852-226189932 47 1.67e-04 GCACAGGAAG GCACGTGT GTGGTTGTGA chr10:30479923-30480003 68 1.67e-04 aggccccctg tcacgtgg acatg chr9:140406327-140406407 36 1.67e-04 aggccccctg tcacgtgg acaggtgact chr7:86740295-86740375 66 1.67e-04 TGTAACTTGC TCACATGC CTATCTT chr22:41050645-41050725 54 1.67e-04 ctgagataag gcacgtgt gtaaaaggct chr3:130791159-130791239 2 1.67e-04 a tcacatgc agaggtggat chr1:235254118-235254198 59 1.67e-04 GAGAGCTGGG GCACGTGT TACTGATTTT chr8:27795395-27795475 57 1.67e-04 ccaaatacag tcacatgc tgaggcacgg chr19:33161022-33161102 31 1.67e-04 AACATGCAGG TCACATGC AAGAACTGTG chr11:5266072-5266152 45 1.67e-04 ACAGGCTGCT GCACGTGT CTCATGTGCT chr1:100905818-100905898 14 1.67e-04 CATTGCTTTG TCACATGC TTAGCTTCAT chr2:203815465-203815545 57 1.67e-04 TATGAACTGA GCACGTGT AAGCAGTTGT chr2:145277815-145277895 45 1.98e-04 AGCGTGAGCA TCATGTGA AAACGTGATC chr17:33213979-33214059 4 1.98e-04 GAG CCACGTGA ACACATTTGG chr2:46553563-46553643 19 1.98e-04 GATGAGCCTC CCACGTGA CTGTAAGGTT chr2:223699991-223700071 60 1.98e-04 attattgtct ccacgtga caactaagaa chr16:87498422-87498502 11 1.98e-04 TTAGTTTGCT CCACGTGA CCTATGTTCC chr1:233809914-233809994 61 1.98e-04 CAGATACACT CCACGTGA GGAGAGAACA chr20:47470641-47470721 41 2.13e-04 CGAGGGACAG GCACATGA CTTGTGTGTG chr17:4625073-4625153 51 2.13e-04 TGCGGCCGAC GCACATGA CCACCTGTGA chr8:53625752-53625832 36 2.13e-04 TCAACAGTGA GCACATGA GTCTTCCTTG chr11:64653195-64653275 69 2.43e-04 tgacatgagt tcatgtgc acag chr7:86741350-86741430 57 2.43e-04 AGCATGAGTG CCACGTGC TTCTGTAACA chr7:150904259-150904339 12 2.43e-04 GATTTATGGG TCATGTGC CCACAAGATA chr15:22984729-22984809 51 2.43e-04 CTCACATATG CCACGTGC ACTTGCTTCT chr8:48572477-48572557 57 2.74e-04 TGCCCTCTCA GCACATGC GTGCGCAGGC chr2:54801752-54801832 52 2.74e-04 CTCATGTCAG GCACGTGG GGAATCAGTG chr16:87756955-87757035 25 2.74e-04 GAGGGCGGGT GCACGTGG CTGCAGACAG chr4:122712282-122712362 28 3.04e-04 AGAGGCAGCa gcatgtga cttaagcaca chr8:103666318-103666398 22 3.04e-04 AGGGGGCGAG GCATGTGA ACAAAGCGTG chr8:102064084-102064164 49 3.04e-04 CAGCAGCCTG GCATGTGA CTCATTTGCA chr20:60721316-60721396 12 3.04e-04 CCTGAGTTTG GCATGTGA CTGATTATTC chr7:142661732-142661812 20 3.04e-04 CCATACCCAG TCACGGGA GTGCAGCAGC chr3:196377932-196378012 24 3.04e-04 AGGGGATGAG TCACGGGA TTTTGCAGAG chr2:210852885-210852965 18 3.66e-04 ACCTTATCGC TCCCGTGA AGTGCTGGCT chr16:84627679-84627759 16 3.66e-04 ccctgctgcc gcatgtgc gggtcaccac chr19:14385742-14385822 71 3.66e-04 ggggaaatgc tcccgtga tc chr19:39894602-39894682 28 3.66e-04 TGCGAGTGAG TCACGGGC GAGCAGGAGG chr11:12136234-12136314 27 3.66e-04 GACTACCAGT GCATGTGC TTAGATAAGA chr5:139570283-139570363 23 3.66e-04 TGACTGCTAA TCCCGTGA CTCTGAGTAT chr19:37701560-37701640 13 3.66e-04 TAATCGGCGC TCACGGGC AGAGAATATA chr7:44331132-44331212 24 3.66e-04 CGGCATCCAA GCATGTGC CTTATCAGCA chr16:85368634-85368714 61 3.97e-04 gcggtgggac tcccgtgc ctgcgcatgt chr4:170679196-170679276 20 3.97e-04 CCCCGCCCAC TCCCGTGC TGGGCGCGTG chr2:131862102-131862182 68 3.97e-04 ttttttttaa tcacatgt caagg chr7:99291299-99291379 43 4.26e-04 gccgatcgag gcacggga gggtatctcc chr5:95161425-95161505 24 4.26e-04 TCGTAGCTCC ACACATGA CTCCAGCTGT chr6:43905231-43905311 45 4.41e-04 CTGTGGTCAC TCACCTGA CAGACTCCAG chr10:5724034-5724114 11 4.41e-04 CACATATGAA TCACCTGA GCACAGGAGC chr22:22146169-22146249 15 5.16e-04 gagtgcccac acacatgc acacaaagaa chr6:155406933-155407013 30 5.16e-04 GACTCTGTCC ACACGTGG CACCTATGTG chr8:124526601-124526681 52 5.16e-04 GAGTCCCATG ACACGTGG ATACAGACTG chr9:115819002-115819082 34 5.16e-04 CGGTAATAGC GCACGGGC GCGGCCATCT chr6:138132685-138132765 12 5.16e-04 CCATCTGTCG TCAGGTGA CTTCCTGCTC chr14:69658092-69658172 16 5.63e-04 TGGGTAGGCA TCACCTGC CCCAGTAGCT chr1:169162822-169162902 54 6.40e-04 ATAAGGCCTG GCACATGT TGCTGCAGCC chr10:85960906-85960986 29 6.40e-04 tcctcatgta tcacatgg gagtgataaa chr3:170483356-170483436 25 6.40e-04 tgtctgcaag tcacatgg atatcaagtg chr17:80297098-80297178 58 6.40e-04 ctcggagcac gcccgtgc ctctcctgtg chr12:93623333-93623413 50 6.40e-04 taagtgacta acatgtga gtagtatata chr13:114451305-11445138 40 6.40e-04 CCGTAGCACG TCAGGTGC CCAGGGACAG chrX:129728526-129728606 51 6.40e-04 CACCAGCACC ACATGTGA CCTGCTTGTG chr15:40373175-40373255 30 6.99e-04 AGACTAGCAG GCACCTGA CCAATTCTGT chr1:31944558-31944638 38 7.15e-04 tcaggacaaa gcaggtga ccaggggaac chr7:127478184-127478264 48 7.15e-04 aaaggacgga gcaggtga ccaggggaac chr10:126109573-12610965 32 8.23e-04 TTAAGGAGTT TCATATGC AAGAAGTTGC chr8:2965634-2965714 31 8.99e-04 GTCTGCCCTG TCCCGTGT CCTGAGGAAT chr8:102049427-102049507 67 8.99e-04 GGCATTTGTG CCATGTGA CATAGA chr7:102624254-102624334 3 9.59e-04 gg tcacagga tgagattctg chr5:67994143-67994223 41 1.10e-03 ctttcaactt gcacgggt cacctatgta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:47633937-47634017 1.5e-05 40_[+1]_32 chr19:36545315-36545395 1.5e-05 [+1]_72 chr19:39749083-39749163 1.5e-05 38_[+1]_34 chr5:171381009-171381089 1.5e-05 11_[+1]_61 chr1:54665605-54665685 1.5e-05 63_[+1]_9 chr10:81962997-81963077 1.5e-05 49_[+1]_23 chr1:247267783-247267863 1.5e-05 18_[+1]_54 chr6:167364572-167364652 1.5e-05 30_[+1]_42 chr6:15897337-15897417 1.5e-05 30_[+1]_42 chr16:11227288-11227368 1.5e-05 12_[+1]_60 chr1:180086556-180086636 1.5e-05 67_[+1]_5 chr17:27503764-27503844 1.5e-05 65_[+1]_7 chr16:27760337-27760417 1.5e-05 19_[+1]_53 chr18:9829254-9829334 1.5e-05 69_[+1]_3 chr6:14890540-14890620 1.5e-05 4_[+1]_68 chr9:134280055-134280135 1.5e-05 24_[+1]_48 chr15:89019956-89020036 1.5e-05 58_[+1]_14 chr17:25659665-25659745 1.5e-05 65_[+1]_7 chr8:107072808-107072888 1.5e-05 32_[+1]_40 chr21:38818909-38818989 1.5e-05 36_[+1]_36 chr1:16521728-16521808 1.5e-05 54_[+1]_18 chr1:25583239-25583319 3.1e-05 43_[+1]_29 chr21:34588039-34588119 3.1e-05 44_[+1]_28 chrX:107800936-107801016 3.1e-05 56_[+1]_16 chr20:5037775-5037855 3.1e-05 5_[+1]_67 chr16:85075889-85075969 3.1e-05 4_[+1]_68 chr15:56332815-56332895 3.1e-05 41_[+1]_31 chr1:183885329-183885409 3.1e-05 23_[+1]_49 chr6:160403068-160403148 3.1e-05 21_[+1]_51 chr16:9391486-9391566 3.1e-05 9_[+1]_63 chr2:44046093-44046173 3.1e-05 16_[+1]_56 chr22:23145037-23145117 3.1e-05 46_[+1]_26 chr11:75525851-75525931 4.6e-05 37_[+1]_35 chr6:43766781-43766861 4.6e-05 19_[+1]_53 chr11:78003344-78003424 4.6e-05 41_[+1]_31 chr10:48412264-48412344 4.6e-05 27_[+1]_45 chr21:44457108-44457188 4.6e-05 44_[+1]_28 chr1:27339436-27339516 4.6e-05 26_[+1]_46 chr8:29088140-29088220 4.6e-05 27_[+1]_45 chr6:36793379-36793459 4.6e-05 49_[+1]_23 chr15:30107728-30107808 4.6e-05 27_[+1]_45 chr9:96431018-96431098 6.1e-05 53_[+1]_19 chr7:157180026-157180106 6.1e-05 21_[+1]_51 chr9:117247303-117247383 6.1e-05 40_[+1]_32 chr6:105335387-105335467 6.1e-05 46_[+1]_26 chr7:129649791-129649871 6.1e-05 8_[+1]_64 chr20:47654644-47654724 6.1e-05 9_[+1]_63 chr1:11990008-11990088 6.1e-05 35_[+1]_37 chr7:44999327-44999407 6.1e-05 46_[+1]_26 chr3:57134209-57134289 6.1e-05 33_[+1]_39 chr9:124041193-124041273 6.1e-05 28_[+1]_44 chr10:135056541-13505662 7.7e-05 26_[+1]_46 chr7:30193997-30194077 7.7e-05 10_[+1]_62 chr8:125663476-125663556 7.7e-05 72_[+1] chr6:158034139-158034219 7.7e-05 66_[+1]_6 chr1:230296861-230296941 7.7e-05 57_[+1]_15 chr17:72956980-72957060 7.7e-05 70_[+1]_2 chr22:43500128-43500208 7.7e-05 46_[+1]_26 chr17:42236991-42237071 7.7e-05 43_[+1]_29 chr5:179989878-179989958 9.1e-05 72_[+1] chr5:54082270-54082350 9.1e-05 26_[+1]_46 chr3:40378357-40378437 9.1e-05 59_[+1]_13 chr1:202974927-202975007 0.00012 22_[+1]_50 chr9:134180518-134180598 0.00012 50_[+1]_22 chr12:102799860-10279994 0.00012 10_[+1]_62 chr7:106593321-106593401 0.00012 42_[+1]_30 chr15:43513494-43513574 0.00012 65_[+1]_7 chr19:48763075-48763155 0.00012 38_[+1]_34 chr15:29260993-29261073 0.00012 28_[+1]_44 chr1:154293455-154293535 0.00012 23_[+1]_49 chr5:64777798-64777878 0.00017 5_[+1]_67 chr1:226189852-226189932 0.00017 46_[+1]_26 chr10:30479923-30480003 0.00017 67_[+1]_5 chr9:140406327-140406407 0.00017 35_[+1]_37 chr7:86740295-86740375 0.00017 65_[+1]_7 chr22:41050645-41050725 0.00017 53_[+1]_19 chr3:130791159-130791239 0.00017 1_[+1]_71 chr1:235254118-235254198 0.00017 58_[+1]_14 chr8:27795395-27795475 0.00017 56_[+1]_16 chr19:33161022-33161102 0.00017 30_[+1]_42 chr11:5266072-5266152 0.00017 44_[+1]_28 chr1:100905818-100905898 0.00017 13_[+1]_59 chr2:203815465-203815545 0.00017 56_[+1]_16 chr2:145277815-145277895 0.0002 44_[+1]_28 chr17:33213979-33214059 0.0002 3_[+1]_69 chr2:46553563-46553643 0.0002 18_[+1]_54 chr2:223699991-223700071 0.0002 59_[+1]_13 chr16:87498422-87498502 0.0002 10_[+1]_62 chr1:233809914-233809994 0.0002 60_[+1]_12 chr20:47470641-47470721 0.00021 40_[+1]_32 chr17:4625073-4625153 0.00021 50_[+1]_22 chr8:53625752-53625832 0.00021 35_[+1]_37 chr11:64653195-64653275 0.00024 68_[+1]_4 chr7:86741350-86741430 0.00024 56_[+1]_16 chr7:150904259-150904339 0.00024 11_[+1]_61 chr15:22984729-22984809 0.00024 50_[+1]_22 chr8:48572477-48572557 0.00027 56_[+1]_16 chr2:54801752-54801832 0.00027 51_[+1]_21 chr16:87756955-87757035 0.00027 24_[+1]_48 chr4:122712282-122712362 0.0003 27_[+1]_45 chr8:103666318-103666398 0.0003 21_[+1]_51 chr8:102064084-102064164 0.0003 48_[+1]_24 chr20:60721316-60721396 0.0003 11_[+1]_61 chr7:142661732-142661812 0.0003 19_[+1]_53 chr3:196377932-196378012 0.0003 23_[+1]_49 chr2:210852885-210852965 0.00037 17_[+1]_55 chr16:84627679-84627759 0.00037 15_[+1]_57 chr19:14385742-14385822 0.00037 70_[+1]_2 chr19:39894602-39894682 0.00037 27_[+1]_45 chr11:12136234-12136314 0.00037 26_[+1]_46 chr5:139570283-139570363 0.00037 22_[+1]_50 chr19:37701560-37701640 0.00037 12_[+1]_60 chr7:44331132-44331212 0.00037 23_[+1]_49 chr16:85368634-85368714 0.0004 60_[+1]_12 chr4:170679196-170679276 0.0004 19_[+1]_53 chr2:131862102-131862182 0.0004 67_[+1]_5 chr7:99291299-99291379 0.00043 42_[+1]_30 chr5:95161425-95161505 0.00043 23_[+1]_49 chr6:43905231-43905311 0.00044 44_[+1]_28 chr10:5724034-5724114 0.00044 10_[+1]_62 chr22:22146169-22146249 0.00052 14_[+1]_58 chr6:155406933-155407013 0.00052 29_[+1]_43 chr8:124526601-124526681 0.00052 51_[+1]_21 chr9:115819002-115819082 0.00052 33_[+1]_39 chr6:138132685-138132765 0.00052 11_[+1]_61 chr14:69658092-69658172 0.00056 15_[+1]_57 chr1:169162822-169162902 0.00064 53_[+1]_19 chr10:85960906-85960986 0.00064 28_[+1]_44 chr3:170483356-170483436 0.00064 24_[+1]_48 chr17:80297098-80297178 0.00064 57_[+1]_15 chr12:93623333-93623413 0.00064 49_[+1]_23 chr13:114451305-11445138 0.00064 39_[+1]_33 chrX:129728526-129728606 0.00064 50_[+1]_22 chr15:40373175-40373255 0.0007 29_[+1]_43 chr1:31944558-31944638 0.00071 37_[+1]_35 chr7:127478184-127478264 0.00071 47_[+1]_25 chr10:126109573-12610965 0.00082 31_[+1]_41 chr8:2965634-2965714 0.0009 30_[+1]_42 chr8:102049427-102049507 0.0009 66_[+1]_6 chr7:102624254-102624334 0.00096 2_[+1]_70 chr5:67994143-67994223 0.0011 40_[+1]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KCACGTGM width=8 seqs=141 chr19:47633937-47634017 ( 41) TCACGTGA 1 chr19:36545315-36545395 ( 1) TCACGTGA 1 chr19:39749083-39749163 ( 39) TCACGTGA 1 chr5:171381009-171381089 ( 12) TCACGTGA 1 chr1:54665605-54665685 ( 64) TCACGTGA 1 chr10:81962997-81963077 ( 50) TCACGTGA 1 chr1:247267783-247267863 ( 19) TCACGTGA 1 chr6:167364572-167364652 ( 31) TCACGTGA 1 chr6:15897337-15897417 ( 31) TCACGTGA 1 chr16:11227288-11227368 ( 13) TCACGTGA 1 chr1:180086556-180086636 ( 68) TCACGTGA 1 chr17:27503764-27503844 ( 66) TCACGTGA 1 chr16:27760337-27760417 ( 20) TCACGTGA 1 chr18:9829254-9829334 ( 70) TCACGTGA 1 chr6:14890540-14890620 ( 5) TCACGTGA 1 chr9:134280055-134280135 ( 25) TCACGTGA 1 chr15:89019956-89020036 ( 59) TCACGTGA 1 chr17:25659665-25659745 ( 66) TCACGTGA 1 chr8:107072808-107072888 ( 33) TCACGTGA 1 chr21:38818909-38818989 ( 37) TCACGTGA 1 chr1:16521728-16521808 ( 55) TCACGTGA 1 chr1:25583239-25583319 ( 44) TCACGTGC 1 chr21:34588039-34588119 ( 45) TCACGTGC 1 chrX:107800936-107801016 ( 57) TCACGTGC 1 chr20:5037775-5037855 ( 6) TCACGTGC 1 chr16:85075889-85075969 ( 5) TCACGTGC 1 chr15:56332815-56332895 ( 42) TCACGTGC 1 chr1:183885329-183885409 ( 24) TCACGTGC 1 chr6:160403068-160403148 ( 22) TCACGTGC 1 chr16:9391486-9391566 ( 10) TCACGTGC 1 chr2:44046093-44046173 ( 17) TCACGTGC 1 chr22:23145037-23145117 ( 47) TCACGTGC 1 chr11:75525851-75525931 ( 38) GCACGTGA 1 chr6:43766781-43766861 ( 20) GCACGTGA 1 chr11:78003344-78003424 ( 42) GCACGTGA 1 chr10:48412264-48412344 ( 28) GCACGTGA 1 chr21:44457108-44457188 ( 45) GCACGTGA 1 chr1:27339436-27339516 ( 27) GCACGTGA 1 chr8:29088140-29088220 ( 28) GCACGTGA 1 chr6:36793379-36793459 ( 50) GCACGTGA 1 chr15:30107728-30107808 ( 28) GCACGTGA 1 chr9:96431018-96431098 ( 54) GCACGTGC 1 chr7:157180026-157180106 ( 22) GCACGTGC 1 chr9:117247303-117247383 ( 41) GCACGTGC 1 chr6:105335387-105335467 ( 47) GCACGTGC 1 chr7:129649791-129649871 ( 9) GCACGTGC 1 chr20:47654644-47654724 ( 10) GCACGTGC 1 chr1:11990008-11990088 ( 36) GCACGTGC 1 chr7:44999327-44999407 ( 47) GCACGTGC 1 chr3:57134209-57134289 ( 34) GCACGTGC 1 chr9:124041193-124041273 ( 29) GCACGTGC 1 chr10:135056541-13505662 ( 27) TCACGTGT 1 chr7:30193997-30194077 ( 11) TCACGTGT 1 chr8:125663476-125663556 ( 73) TCACGTGT 1 chr6:158034139-158034219 ( 67) TCACGTGT 1 chr1:230296861-230296941 ( 58) TCACGTGT 1 chr17:72956980-72957060 ( 71) TCACGTGT 1 chr22:43500128-43500208 ( 47) TCACGTGT 1 chr17:42236991-42237071 ( 44) TCACGTGT 1 chr5:179989878-179989958 ( 73) ACACGTGA 1 chr5:54082270-54082350 ( 27) ACACGTGA 1 chr3:40378357-40378437 ( 60) ACACGTGA 1 chr1:202974927-202975007 ( 23) ACACGTGC 1 chr9:134180518-134180598 ( 51) ACACGTGC 1 chr12:102799860-10279994 ( 11) ACACGTGC 1 chr7:106593321-106593401 ( 43) TCACATGA 1 chr15:43513494-43513574 ( 66) ACACGTGC 1 chr19:48763075-48763155 ( 39) TCACATGA 1 chr15:29260993-29261073 ( 29) ACACGTGC 1 chr1:154293455-154293535 ( 24) ACACGTGC 1 chr5:64777798-64777878 ( 6) TCACGTGG 1 chr1:226189852-226189932 ( 47) GCACGTGT 1 chr10:30479923-30480003 ( 68) TCACGTGG 1 chr9:140406327-140406407 ( 36) TCACGTGG 1 chr7:86740295-86740375 ( 66) TCACATGC 1 chr22:41050645-41050725 ( 54) GCACGTGT 1 chr3:130791159-130791239 ( 2) TCACATGC 1 chr1:235254118-235254198 ( 59) GCACGTGT 1 chr8:27795395-27795475 ( 57) TCACATGC 1 chr19:33161022-33161102 ( 31) TCACATGC 1 chr11:5266072-5266152 ( 45) GCACGTGT 1 chr1:100905818-100905898 ( 14) TCACATGC 1 chr2:203815465-203815545 ( 57) GCACGTGT 1 chr2:145277815-145277895 ( 45) TCATGTGA 1 chr17:33213979-33214059 ( 4) CCACGTGA 1 chr2:46553563-46553643 ( 19) CCACGTGA 1 chr2:223699991-223700071 ( 60) CCACGTGA 1 chr16:87498422-87498502 ( 11) CCACGTGA 1 chr1:233809914-233809994 ( 61) CCACGTGA 1 chr20:47470641-47470721 ( 41) GCACATGA 1 chr17:4625073-4625153 ( 51) GCACATGA 1 chr8:53625752-53625832 ( 36) GCACATGA 1 chr11:64653195-64653275 ( 69) TCATGTGC 1 chr7:86741350-86741430 ( 57) CCACGTGC 1 chr7:150904259-150904339 ( 12) TCATGTGC 1 chr15:22984729-22984809 ( 51) CCACGTGC 1 chr8:48572477-48572557 ( 57) GCACATGC 1 chr2:54801752-54801832 ( 52) GCACGTGG 1 chr16:87756955-87757035 ( 25) GCACGTGG 1 chr4:122712282-122712362 ( 28) GCATGTGA 1 chr8:103666318-103666398 ( 22) GCATGTGA 1 chr8:102064084-102064164 ( 49) GCATGTGA 1 chr20:60721316-60721396 ( 12) GCATGTGA 1 chr7:142661732-142661812 ( 20) TCACGGGA 1 chr3:196377932-196378012 ( 24) TCACGGGA 1 chr2:210852885-210852965 ( 18) TCCCGTGA 1 chr16:84627679-84627759 ( 16) GCATGTGC 1 chr19:14385742-14385822 ( 71) TCCCGTGA 1 chr19:39894602-39894682 ( 28) TCACGGGC 1 chr11:12136234-12136314 ( 27) GCATGTGC 1 chr5:139570283-139570363 ( 23) TCCCGTGA 1 chr19:37701560-37701640 ( 13) TCACGGGC 1 chr7:44331132-44331212 ( 24) GCATGTGC 1 chr16:85368634-85368714 ( 61) TCCCGTGC 1 chr4:170679196-170679276 ( 20) TCCCGTGC 1 chr2:131862102-131862182 ( 68) TCACATGT 1 chr7:99291299-99291379 ( 43) GCACGGGA 1 chr5:95161425-95161505 ( 24) ACACATGA 1 chr6:43905231-43905311 ( 45) TCACCTGA 1 chr10:5724034-5724114 ( 11) TCACCTGA 1 chr22:22146169-22146249 ( 15) ACACATGC 1 chr6:155406933-155407013 ( 30) ACACGTGG 1 chr8:124526601-124526681 ( 52) ACACGTGG 1 chr9:115819002-115819082 ( 34) GCACGGGC 1 chr6:138132685-138132765 ( 12) TCAGGTGA 1 chr14:69658092-69658172 ( 16) TCACCTGC 1 chr1:169162822-169162902 ( 54) GCACATGT 1 chr10:85960906-85960986 ( 29) TCACATGG 1 chr3:170483356-170483436 ( 25) TCACATGG 1 chr17:80297098-80297178 ( 58) GCCCGTGC 1 chr12:93623333-93623413 ( 50) ACATGTGA 1 chr13:114451305-11445138 ( 40) TCAGGTGC 1 chrX:129728526-129728606 ( 51) ACATGTGA 1 chr15:40373175-40373255 ( 30) GCACCTGA 1 chr1:31944558-31944638 ( 38) GCAGGTGA 1 chr7:127478184-127478264 ( 48) GCAGGTGA 1 chr10:126109573-12610965 ( 32) TCATATGC 1 chr8:2965634-2965714 ( 31) TCCCGTGT 1 chr8:102049427-102049507 ( 67) CCATGTGA 1 chr7:102624254-102624334 ( 3) TCACAGGA 1 chr5:67994143-67994223 ( 41) GCACGGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.79481 E= 9.5e-099 -120 -212 33 102 -1378 202 -1378 -1378 195 -231 -1378 -1378 -1378 182 -316 -136 -86 -312 172 -1378 -1378 -1378 -216 189 -1378 -1378 198 -1378 91 52 -199 -108 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 141 E= 9.5e-099 0.106383 0.056738 0.319149 0.517730 0.000000 1.000000 0.000000 0.000000 0.950355 0.049645 0.000000 0.000000 0.000000 0.872340 0.028369 0.099291 0.134752 0.028369 0.836879 0.000000 0.000000 0.000000 0.056738 0.943262 0.000000 0.000000 1.000000 0.000000 0.460993 0.354610 0.063830 0.120567 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCACGTGM MEME-1 regular expression -------------------------------------------------------------------------------- [TG]CACGTG[AC] -------------------------------------------------------------------------------- Time 4.92 secs. ******************************************************************************** ******************************************************************************** MOTIF WGATAAGR MEME-2 width = 8 sites = 34 llr = 305 E-value = 5.5e-011 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6:a:aa24 pos.-specific C :::::::2 probability G :a::::85 matrix T 4::a:::: bits 2.0 ***** 1.8 ***** 1.6 ***** 1.4 ***** Relative 1.2 ****** Entropy 1.0 ******* (12.9 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGATAAGG consensus T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:169162822-169162902 42 1.49e-05 TGTATTACAG AGATAAGG CCTGGCACAT chr7:30193997-30194077 26 1.49e-05 tgtttcttat agataagg agtgactctc chr10:126109573-12610965 8 1.49e-05 GGCTCAC AGATAAGG TGCTCTTTAA chr5:127374501-127374581 32 1.49e-05 TGTGGTCCCA AGATAAGG ATTGAAAGCA chr2:75089565-75089645 27 1.49e-05 TGTGCTGGGG AGATAAGG CCCATGTAGA chr6:147217434-147217514 73 2.93e-05 TTCTGAGAAA AGATAAGA chr7:102624254-102624334 59 2.93e-05 tggctaaagg agataaga ctctccctca chr3:71257528-71257608 68 2.93e-05 TCCAAGCAAA AGATAAGA AAAGC chr22:22139071-22139151 58 2.93e-05 tttttttaag agataaga gtgtcaccgt chr13:26821857-26821937 69 2.93e-05 tgtcagtacc agataaga aagt chr1:35896828-35896908 34 2.93e-05 GGGATTTCTG AGATAAGA TAGGAATAAA chrX:129728526-129728606 24 2.93e-05 TGCTAGGGGT AGATAAGA GCTGCAGGTC chr11:12136234-12136314 37 2.93e-05 GCATGTGCTT AGATAAGA GGTTTTAAAA chr19:39749083-39749163 31 4.48e-05 gtcaagtgat tgataagg tcacgtgagt chr6:167364572-167364652 23 4.48e-05 ctccaatgac tgataagg tcacgtgagt chr12:13080339-13080419 62 4.48e-05 gacattcgac tgataagg gaagaacgcc chr6:25974297-25974377 66 4.48e-05 gcttagggtc tgataagg ctgcagt chr19:48763075-48763155 31 4.48e-05 ctctaatgat tgataagg tcacatgagt chr1:109159765-109159845 35 4.48e-05 tgaggtcaga tgataagg agtcttgtgg chr19:49379707-49379787 3 4.48e-05 at tgataagg tcacacgagt chr22:43500128-43500208 30 4.48e-05 cccaagtgat tgataagg tcaagcaagt chr7:106593321-106593401 10 5.98e-05 TGTGAGGTT TGATAAGA GCTTGTCTGG chr8:2965634-2965714 73 7.43e-05 TGTTCGTGAG AGATAAGC chr17:33212316-33212396 33 7.43e-05 TGCTTCTTGG AGATAAGC TCCCAATAGT chr1:180086556-180086636 4 7.43e-05 tgg agataagc cccgcacagg chr7:150904259-150904339 25 7.43e-05 TGTGCCCACA AGATAAGC AGAGGCTGCA chr3:45615758-45615838 10 7.43e-05 ctggccttg agataagc aatactgaaa chr12:93623333-93623413 23 8.94e-05 acagtcgatc tgataagc aaaggctact chr18:3603154-3603234 33 1.04e-04 TCAGGTCACC AGATAAAG GCAAGTCTTG chr22:22146169-22146249 54 1.18e-04 atggggcaaa agataaaa aatcggtgag chr11:117878481-11787856 40 1.18e-04 ATAGCTCTGC AGATAAAA ACTCACTTCC chr8:102064084-102064164 16 1.33e-04 GGGTACTGCA TGATAAAG CTGTCAGTCT chr17:42236991-42237071 27 1.33e-04 ctcaaaagat tgataaag tcaagcaagt chr10:85960906-85960986 40 1.47e-04 cacatgggag tgataaaa acacatcctt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:169162822-169162902 1.5e-05 41_[+2]_31 chr7:30193997-30194077 1.5e-05 25_[+2]_47 chr10:126109573-12610965 1.5e-05 7_[+2]_65 chr5:127374501-127374581 1.5e-05 31_[+2]_41 chr2:75089565-75089645 1.5e-05 26_[+2]_46 chr6:147217434-147217514 2.9e-05 72_[+2] chr7:102624254-102624334 2.9e-05 58_[+2]_14 chr3:71257528-71257608 2.9e-05 67_[+2]_5 chr22:22139071-22139151 2.9e-05 57_[+2]_15 chr13:26821857-26821937 2.9e-05 68_[+2]_4 chr1:35896828-35896908 2.9e-05 33_[+2]_39 chrX:129728526-129728606 2.9e-05 23_[+2]_49 chr11:12136234-12136314 2.9e-05 36_[+2]_36 chr19:39749083-39749163 4.5e-05 30_[+2]_42 chr6:167364572-167364652 4.5e-05 22_[+2]_50 chr12:13080339-13080419 4.5e-05 61_[+2]_11 chr6:25974297-25974377 4.5e-05 65_[+2]_7 chr19:48763075-48763155 4.5e-05 30_[+2]_42 chr1:109159765-109159845 4.5e-05 34_[+2]_38 chr19:49379707-49379787 4.5e-05 2_[+2]_70 chr22:43500128-43500208 4.5e-05 29_[+2]_43 chr7:106593321-106593401 6e-05 9_[+2]_63 chr8:2965634-2965714 7.4e-05 72_[+2] chr17:33212316-33212396 7.4e-05 32_[+2]_40 chr1:180086556-180086636 7.4e-05 3_[+2]_69 chr7:150904259-150904339 7.4e-05 24_[+2]_48 chr3:45615758-45615838 7.4e-05 9_[+2]_63 chr12:93623333-93623413 8.9e-05 22_[+2]_50 chr18:3603154-3603234 0.0001 32_[+2]_40 chr22:22146169-22146249 0.00012 53_[+2]_19 chr11:117878481-11787856 0.00012 39_[+2]_33 chr8:102064084-102064164 0.00013 15_[+2]_57 chr17:42236991-42237071 0.00013 26_[+2]_46 chr10:85960906-85960986 0.00015 39_[+2]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGATAAGR width=8 seqs=34 chr1:169162822-169162902 ( 42) AGATAAGG 1 chr7:30193997-30194077 ( 26) AGATAAGG 1 chr10:126109573-12610965 ( 8) AGATAAGG 1 chr5:127374501-127374581 ( 32) AGATAAGG 1 chr2:75089565-75089645 ( 27) AGATAAGG 1 chr6:147217434-147217514 ( 73) AGATAAGA 1 chr7:102624254-102624334 ( 59) AGATAAGA 1 chr3:71257528-71257608 ( 68) AGATAAGA 1 chr22:22139071-22139151 ( 58) AGATAAGA 1 chr13:26821857-26821937 ( 69) AGATAAGA 1 chr1:35896828-35896908 ( 34) AGATAAGA 1 chrX:129728526-129728606 ( 24) AGATAAGA 1 chr11:12136234-12136314 ( 37) AGATAAGA 1 chr19:39749083-39749163 ( 31) TGATAAGG 1 chr6:167364572-167364652 ( 23) TGATAAGG 1 chr12:13080339-13080419 ( 62) TGATAAGG 1 chr6:25974297-25974377 ( 66) TGATAAGG 1 chr19:48763075-48763155 ( 31) TGATAAGG 1 chr1:109159765-109159845 ( 35) TGATAAGG 1 chr19:49379707-49379787 ( 3) TGATAAGG 1 chr22:43500128-43500208 ( 30) TGATAAGG 1 chr7:106593321-106593401 ( 10) TGATAAGA 1 chr8:2965634-2965714 ( 73) AGATAAGC 1 chr17:33212316-33212396 ( 33) AGATAAGC 1 chr1:180086556-180086636 ( 4) AGATAAGC 1 chr7:150904259-150904339 ( 25) AGATAAGC 1 chr3:45615758-45615838 ( 10) AGATAAGC 1 chr12:93623333-93623413 ( 23) TGATAAGC 1 chr18:3603154-3603234 ( 33) AGATAAAG 1 chr22:22146169-22146249 ( 54) AGATAAAA 1 chr11:117878481-11787856 ( 40) AGATAAAA 1 chr8:102064084-102064164 ( 16) TGATAAAG 1 chr17:42236991-42237071 ( 27) TGATAAAG 1 chr10:85960906-85960986 ( 40) TGATAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.4321 E= 5.5e-011 133 -1173 -1173 59 -1173 -1173 198 -1173 203 -1173 -1173 -1173 -1173 -1173 -1173 197 203 -1173 -1173 -1173 203 -1173 -1173 -1173 -47 -1173 170 -1173 53 -48 89 -1173 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 34 E= 5.5e-011 0.617647 0.000000 0.000000 0.382353 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.176471 0.000000 0.823529 0.000000 0.352941 0.176471 0.470588 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGATAAGR MEME-2 regular expression -------------------------------------------------------------------------------- [AT]GATAAG[GA] -------------------------------------------------------------------------------- Time 8.50 secs. ******************************************************************************** ******************************************************************************** MOTIF TCTTATCT MEME-3 width = 8 sites = 57 llr = 444 E-value = 6.3e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::19::2 pos.-specific C 26::1:a: probability G 22:::::: matrix T 6299:a:8 bits 2.0 ** 1.8 ** 1.6 ***** 1.4 ***** Relative 1.2 ****** Entropy 1.0 ****** (11.2 bits) 0.8 ****** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCTTATCT consensus GT A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:35311374-35311454 63 1.61e-05 AGGCCATTCT TCTTATCT CAGCTTTAAT chr9:138876762-138876842 18 1.61e-05 CTCACACGGG TCTTATCT GTTCTTATCC chr6:154841591-154841671 37 1.61e-05 AAGGAGAACC TCTTATCT GTTCCGGTTA chr6:43811142-43811222 45 1.61e-05 gctgtaacat tcttatct ttgccttgtg chr1:180086556-180086636 31 1.61e-05 gctgtagtgc tcttatct ctcagtaagg chr20:47654644-47654724 53 1.61e-05 GAGGTTAACC TCTTATCT CTTGTCCCTC chr6:150400034-150400114 10 1.61e-05 tttttgcta tcttatct ccctatgtgg chr12:45667701-45667781 38 3.21e-05 TGGAGCTCAT GCTTATCt cagcagcacg chr1:59753885-59753965 7 3.21e-05 GATAAG GCTTATCT CATTCCAACC chr6:43905231-43905311 26 3.21e-05 ATCATAGACA GCTTATCT CCTGTGGTCA chr2:234608944-234609024 47 3.21e-05 AAAACCCTGT GCTTATCT TTATGGCTGA chr1:40596746-40596826 51 3.21e-05 TCATAAAGAT GCTTATCT AACTTCCCCA chr17:27503764-27503844 20 3.21e-05 GTCACACGGA GCTTATCT GGCTCCAGGT chr10:112617438-11261751 30 3.21e-05 GATTGTTCAA GCTTATCT TCTCTAGATA chr5:179989878-179989958 6 3.21e-05 TAACT GCTTATCT CACGGGATTG chr5:67599709-67599789 15 6.44e-05 agtctgctct ttttatct gtctttaacc chr15:82234677-82234757 28 6.44e-05 TTTGCTTAAG TTTTATCT CCACTCTCCA chr10:126109573-12610965 64 6.44e-05 AATGTCTGGG TTTTATCT CTTTCCTCT chr7:86741350-86741430 27 6.44e-05 GTGTTCAGGC CCTTATCT TATATGGCTC chr13:26821857-26821937 35 6.44e-05 accttatggc ttttatct ttaccatttt chr5:95161425-95161505 72 6.44e-05 TCACGTTTTT CCTTATCT G chr12:76328409-76328489 11 7.98e-05 TAATTTCAGT TCTTATCA CCATATGATG chr1:8064930-8065010 35 7.98e-05 TGCAGACAAG TCTTATCA CGCGTCTGAG chr6:105335387-105335467 64 7.98e-05 CCCTCACCTC TCTTATCA CTCCACTGT chr1:22448203-22448283 24 7.98e-05 CGGCGCTTGT TCTTATCA CACCAATAGC chr6:25974297-25974377 1 9.63e-05 . tgttatct caatttttgt chr20:5037775-5037855 65 9.63e-05 cttacaacat tgttatct tttttttt chr8:96113881-96113961 57 9.63e-05 AAACATTTCT TGTTATCT TAATTGTTCA chr15:40373175-40373255 45 9.63e-05 TGACCAATTC TGTTATCT GTACTGTTCA chr2:131862102-131862182 26 1.13e-04 tttgtctgat gtttatct ttcagttaga chr3:196377932-196378012 60 1.13e-04 CAAGAGGATT GTTTATCT TGGACTCTTT chr5:171381009-171381089 63 1.28e-04 CCAGCAAAAG GCTTATCA CTAACACTCT chr19:14385742-14385822 9 1.28e-04 tgccagac gcttatca aacaaccaga chr21:38818909-38818989 67 1.28e-04 tgtcagagtg gcttatca tcccaa chr15:73767276-73767356 36 1.44e-04 TACTATTTTG CTTTATCT GCTACTGTCA chr2:170972511-170972591 17 1.44e-04 gcagtattgc ctttatct atggacgtgc chr16:89282853-89282933 58 1.92e-04 ctgatctcct tcttctct gggagttctc chr9:140406327-140406407 61 1.92e-04 acttgcttgt ccttatca atcacttgag chr2:20289672-20289752 58 1.92e-04 TAGCGCCTGT TTTTATCA GAACAGAGCA chr3:130791159-130791239 49 1.92e-04 atgcttctct ttttatca gtgaggaaca chr1:235254118-235254198 73 1.92e-04 GTGTTACTGA TTTTATCA chr8:28745629-28745709 31 1.92e-04 gcttacttat ccttatca gttcaagagt chr12:40493397-40493477 32 2.24e-04 AACAGACTTA CGTTATCT TACTGACAAC chr8:68022159-68022239 8 2.24e-04 ctactcc cgttatct tatacagctg chr4:122712282-122712362 7 2.40e-04 AGAAAT TGTTATCA TCAAGAGGCA chr13:22562125-22562205 55 2.55e-04 TTAAATTCAG TCTAATCT CGTCATGCTG chr8:124526601-124526681 26 2.55e-04 ATTTTTCTCC TCTAATCT TCACTTTTGA chr2:38770185-38770265 69 3.35e-04 tacttgctcc ttttctct tgca chr8:144973687-144973767 6 3.35e-04 CCACC CCTTCTCT TGGACACAAA chr8:53625752-53625832 21 3.35e-04 TAACGTGACT CTTTATCA ACAGTGAGCA chr5:54082270-54082350 51 3.35e-04 CCTGACCCAG CCTTCTCT GTGTCCGTGG chr7:73265947-73266027 45 3.66e-04 gagggtgaga tcatatct cactgtggtt chr22:41050645-41050725 21 3.66e-04 tcactaggga tcatatct gcctcacagg chr1:27339436-27339516 40 4.14e-04 CGTGAGTCAC TGTTCTCT AGGGAGATTC chr15:85458375-85458455 67 4.14e-04 ACAGTTCTGG TGTTCTCT GTCGGG chr3:71257528-71257608 36 4.29e-04 CAAACAACTT GCTAATCT CACCAGCCCC chr8:27795395-27795475 39 5.08e-04 tctttaaagt tcctatct ccaaatacag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:35311374-35311454 1.6e-05 62_[+3]_10 chr9:138876762-138876842 1.6e-05 17_[+3]_55 chr6:154841591-154841671 1.6e-05 36_[+3]_36 chr6:43811142-43811222 1.6e-05 44_[+3]_28 chr1:180086556-180086636 1.6e-05 30_[+3]_42 chr20:47654644-47654724 1.6e-05 52_[+3]_20 chr6:150400034-150400114 1.6e-05 9_[+3]_63 chr12:45667701-45667781 3.2e-05 37_[+3]_35 chr1:59753885-59753965 3.2e-05 6_[+3]_66 chr6:43905231-43905311 3.2e-05 25_[+3]_47 chr2:234608944-234609024 3.2e-05 46_[+3]_26 chr1:40596746-40596826 3.2e-05 50_[+3]_22 chr17:27503764-27503844 3.2e-05 19_[+3]_53 chr10:112617438-11261751 3.2e-05 29_[+3]_43 chr5:179989878-179989958 3.2e-05 5_[+3]_67 chr5:67599709-67599789 6.4e-05 14_[+3]_58 chr15:82234677-82234757 6.4e-05 27_[+3]_45 chr10:126109573-12610965 6.4e-05 63_[+3]_9 chr7:86741350-86741430 6.4e-05 26_[+3]_46 chr13:26821857-26821937 6.4e-05 34_[+3]_38 chr5:95161425-95161505 6.4e-05 71_[+3]_1 chr12:76328409-76328489 8e-05 10_[+3]_62 chr1:8064930-8065010 8e-05 34_[+3]_38 chr6:105335387-105335467 8e-05 63_[+3]_9 chr1:22448203-22448283 8e-05 23_[+3]_49 chr6:25974297-25974377 9.6e-05 [+3]_72 chr20:5037775-5037855 9.6e-05 64_[+3]_8 chr8:96113881-96113961 9.6e-05 56_[+3]_16 chr15:40373175-40373255 9.6e-05 44_[+3]_28 chr2:131862102-131862182 0.00011 25_[+3]_47 chr3:196377932-196378012 0.00011 59_[+3]_13 chr5:171381009-171381089 0.00013 62_[+3]_10 chr19:14385742-14385822 0.00013 8_[+3]_64 chr21:38818909-38818989 0.00013 66_[+3]_6 chr15:73767276-73767356 0.00014 35_[+3]_37 chr2:170972511-170972591 0.00014 16_[+3]_56 chr16:89282853-89282933 0.00019 57_[+3]_15 chr9:140406327-140406407 0.00019 60_[+3]_12 chr2:20289672-20289752 0.00019 57_[+3]_15 chr3:130791159-130791239 0.00019 48_[+3]_24 chr1:235254118-235254198 0.00019 72_[+3] chr8:28745629-28745709 0.00019 30_[+3]_42 chr12:40493397-40493477 0.00022 31_[+3]_41 chr8:68022159-68022239 0.00022 7_[+3]_65 chr4:122712282-122712362 0.00024 6_[+3]_66 chr13:22562125-22562205 0.00026 54_[+3]_18 chr8:124526601-124526681 0.00026 25_[+3]_47 chr2:38770185-38770265 0.00034 68_[+3]_4 chr8:144973687-144973767 0.00034 5_[+3]_67 chr8:53625752-53625832 0.00034 20_[+3]_52 chr5:54082270-54082350 0.00034 50_[+3]_22 chr7:73265947-73266027 0.00037 44_[+3]_28 chr22:41050645-41050725 0.00037 20_[+3]_52 chr1:27339436-27339516 0.00041 39_[+3]_33 chr15:85458375-85458455 0.00041 66_[+3]_6 chr3:71257528-71257608 0.00043 35_[+3]_37 chr8:27795395-27795475 0.00051 38_[+3]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCTTATCT width=8 seqs=57 chr6:35311374-35311454 ( 63) TCTTATCT 1 chr9:138876762-138876842 ( 18) TCTTATCT 1 chr6:154841591-154841671 ( 37) TCTTATCT 1 chr6:43811142-43811222 ( 45) TCTTATCT 1 chr1:180086556-180086636 ( 31) TCTTATCT 1 chr20:47654644-47654724 ( 53) TCTTATCT 1 chr6:150400034-150400114 ( 10) TCTTATCT 1 chr12:45667701-45667781 ( 38) GCTTATCT 1 chr1:59753885-59753965 ( 7) GCTTATCT 1 chr6:43905231-43905311 ( 26) GCTTATCT 1 chr2:234608944-234609024 ( 47) GCTTATCT 1 chr1:40596746-40596826 ( 51) GCTTATCT 1 chr17:27503764-27503844 ( 20) GCTTATCT 1 chr10:112617438-11261751 ( 30) GCTTATCT 1 chr5:179989878-179989958 ( 6) GCTTATCT 1 chr5:67599709-67599789 ( 15) TTTTATCT 1 chr15:82234677-82234757 ( 28) TTTTATCT 1 chr10:126109573-12610965 ( 64) TTTTATCT 1 chr7:86741350-86741430 ( 27) CCTTATCT 1 chr13:26821857-26821937 ( 35) TTTTATCT 1 chr5:95161425-95161505 ( 72) CCTTATCT 1 chr12:76328409-76328489 ( 11) TCTTATCA 1 chr1:8064930-8065010 ( 35) TCTTATCA 1 chr6:105335387-105335467 ( 64) TCTTATCA 1 chr1:22448203-22448283 ( 24) TCTTATCA 1 chr6:25974297-25974377 ( 1) TGTTATCT 1 chr20:5037775-5037855 ( 65) TGTTATCT 1 chr8:96113881-96113961 ( 57) TGTTATCT 1 chr15:40373175-40373255 ( 45) TGTTATCT 1 chr2:131862102-131862182 ( 26) GTTTATCT 1 chr3:196377932-196378012 ( 60) GTTTATCT 1 chr5:171381009-171381089 ( 63) GCTTATCA 1 chr19:14385742-14385822 ( 9) GCTTATCA 1 chr21:38818909-38818989 ( 67) GCTTATCA 1 chr15:73767276-73767356 ( 36) CTTTATCT 1 chr2:170972511-170972591 ( 17) CTTTATCT 1 chr16:89282853-89282933 ( 58) TCTTCTCT 1 chr9:140406327-140406407 ( 61) CCTTATCA 1 chr2:20289672-20289752 ( 58) TTTTATCA 1 chr3:130791159-130791239 ( 49) TTTTATCA 1 chr1:235254118-235254198 ( 73) TTTTATCA 1 chr8:28745629-28745709 ( 31) CCTTATCA 1 chr12:40493397-40493477 ( 32) CGTTATCT 1 chr8:68022159-68022239 ( 8) CGTTATCT 1 chr4:122712282-122712362 ( 7) TGTTATCA 1 chr13:22562125-22562205 ( 55) TCTAATCT 1 chr8:124526601-124526681 ( 26) TCTAATCT 1 chr2:38770185-38770265 ( 69) TTTTCTCT 1 chr8:144973687-144973767 ( 6) CCTTCTCT 1 chr8:53625752-53625832 ( 21) CTTTATCA 1 chr5:54082270-54082350 ( 51) CCTTCTCT 1 chr7:73265947-73266027 ( 45) TCATATCT 1 chr22:41050645-41050725 ( 21) TCATATCT 1 chr1:27339436-27339516 ( 40) TGTTCTCT 1 chr15:85458375-85458455 ( 67) TGTTCTCT 1 chr3:71257528-71257608 ( 36) GCTAATCT 1 chr8:27795395-27795475 ( 39) TCCTATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.94323 E= 6.3e-012 -1248 -35 -4 114 -1248 132 -68 -16 -280 -381 -1248 189 -222 -1248 -1248 189 187 -123 -1248 -1248 -1248 -1248 -1248 197 -1248 202 -1248 -1248 0 -1248 -1248 157 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 57 E= 6.3e-012 0.000000 0.192982 0.245614 0.561404 0.000000 0.614035 0.157895 0.228070 0.035088 0.017544 0.000000 0.947368 0.052632 0.000000 0.000000 0.947368 0.894737 0.105263 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.245614 0.000000 0.000000 0.754386 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTTATCT MEME-3 regular expression -------------------------------------------------------------------------------- [TG][CT]TTATC[TA] -------------------------------------------------------------------------------- Time 12.06 secs. ******************************************************************************** ******************************************************************************** MOTIF TGASTCAB MEME-4 width = 8 sites = 21 llr = 188 E-value = 9.3e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::a:::a: pos.-specific C :1:4:a:5 probability G :9:6:::2 matrix T a:::a::3 bits 2.0 * * *** 1.8 * * *** 1.6 * * *** 1.4 *** *** Relative 1.2 *** *** Entropy 1.0 ******* (12.9 bits) 0.8 ******* 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGAGTCAC consensus C T sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:134180518-134180598 68 1.52e-05 catagcagca tgagtcac ggcag chr20:47470641-47470721 15 1.52e-05 GCTGCTGGGC TGAGTCAC ACGCAGGCCG chr2:54801752-54801832 2 1.52e-05 T TGAGTCAC AGGGTGCAGG chr1:183885329-183885409 54 1.52e-05 TAGGTCACAC TGAGTCAC CGATAGGCAT chr6:138132685-138132765 43 1.52e-05 TAGCTGACCG TGAGTCAC GTCGTTGCTG chr15:56332815-56332895 6 3.01e-05 ATGTG TGACTCAC GTTGGAACAG chr17:80297098-80297178 39 3.01e-05 tcgttgtgtg tgactcac tctcggagca chr19:39749083-39749163 13 4.59e-05 gtaaggagta tgagtcat gtcaagtgat chr6:167364572-167364652 5 4.59e-05 agtg tgagtcat ctccaatgac chr19:48763075-48763155 13 4.59e-05 gtaaggagtg tgagtcat ctctaatgat chr22:43500128-43500208 12 4.59e-05 ggaaggagag tgagtcat cccaagtgat chr5:127374501-127374581 62 4.59e-05 AGGAAACAAG TGAGTCAT TACAACTATT chr17:42236991-42237071 9 4.59e-05 aaggagtg tgagtcat ctcaaaagat chr1:31944558-31944638 24 9.21e-05 tgaccagggg tgactcag gacaaagcag chr6:140087137-140087217 9 9.21e-05 CACTAAGA TGACTCAG AGAGCTGCTA chr16:27760337-27760417 62 9.21e-05 CTCTTGtggc tgactcag acgcctcagg chr5:179989878-179989958 24 9.21e-05 CACGGGATTG TGACTCAG TGAAAACATG chr16:87498422-87498502 43 9.21e-05 AAGTGCTCTC TGACTCAG GCTCACCCGC chr3:170483356-170483436 65 1.07e-04 cagactttgg tcagtcac agacggga chr17:25659665-25659745 39 1.07e-04 CAACTGGCTG TCAGTCAC GGGGCTCTTC chr8:135844720-135844800 5 1.21e-04 GTGC TCACTCAC ACGCACGCAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:134180518-134180598 1.5e-05 67_[+4]_5 chr20:47470641-47470721 1.5e-05 14_[+4]_58 chr2:54801752-54801832 1.5e-05 1_[+4]_71 chr1:183885329-183885409 1.5e-05 53_[+4]_19 chr6:138132685-138132765 1.5e-05 42_[+4]_30 chr15:56332815-56332895 3e-05 5_[+4]_67 chr17:80297098-80297178 3e-05 38_[+4]_34 chr19:39749083-39749163 4.6e-05 12_[+4]_60 chr6:167364572-167364652 4.6e-05 4_[+4]_68 chr19:48763075-48763155 4.6e-05 12_[+4]_60 chr22:43500128-43500208 4.6e-05 11_[+4]_61 chr5:127374501-127374581 4.6e-05 61_[+4]_11 chr17:42236991-42237071 4.6e-05 8_[+4]_64 chr1:31944558-31944638 9.2e-05 23_[+4]_49 chr6:140087137-140087217 9.2e-05 8_[+4]_64 chr16:27760337-27760417 9.2e-05 61_[+4]_11 chr5:179989878-179989958 9.2e-05 23_[+4]_49 chr16:87498422-87498502 9.2e-05 42_[+4]_30 chr3:170483356-170483436 0.00011 64_[+4]_8 chr17:25659665-25659745 0.00011 38_[+4]_34 chr8:135844720-135844800 0.00012 4_[+4]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGASTCAB width=8 seqs=21 chr9:134180518-134180598 ( 68) TGAGTCAC 1 chr20:47470641-47470721 ( 15) TGAGTCAC 1 chr2:54801752-54801832 ( 2) TGAGTCAC 1 chr1:183885329-183885409 ( 54) TGAGTCAC 1 chr6:138132685-138132765 ( 43) TGAGTCAC 1 chr15:56332815-56332895 ( 6) TGACTCAC 1 chr17:80297098-80297178 ( 39) TGACTCAC 1 chr19:39749083-39749163 ( 13) TGAGTCAT 1 chr6:167364572-167364652 ( 5) TGAGTCAT 1 chr19:48763075-48763155 ( 13) TGAGTCAT 1 chr22:43500128-43500208 ( 12) TGAGTCAT 1 chr5:127374501-127374581 ( 62) TGAGTCAT 1 chr17:42236991-42237071 ( 9) TGAGTCAT 1 chr1:31944558-31944638 ( 24) TGACTCAG 1 chr6:140087137-140087217 ( 9) TGACTCAG 1 chr16:27760337-27760417 ( 62) TGACTCAG 1 chr5:179989878-179989958 ( 24) TGACTCAG 1 chr16:87498422-87498502 ( 43) TGACTCAG 1 chr3:170483356-170483436 ( 65) TCAGTCAC 1 chr17:25659665-25659745 ( 39) TCAGTCAC 1 chr8:135844720-135844800 ( 5) TCACTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.25601 E= 9.3e+002 -1104 -1104 -1104 197 -1104 -79 176 -1104 203 -1104 -1104 -1104 -1104 63 129 -1104 -1104 -1104 -1104 197 -1104 202 -1104 -1104 203 -1104 -1104 -1104 -1104 95 -9 17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 21 E= 9.3e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.857143 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.380952 0.619048 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.476190 0.238095 0.285714 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAB MEME-4 regular expression -------------------------------------------------------------------------------- TGA[GC]TCA[CTG] -------------------------------------------------------------------------------- Time 15.48 secs. ******************************************************************************** ******************************************************************************** MOTIF CCVCGCCC MEME-5 width = 8 sites = 16 llr = 152 E-value = 1.2e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::3::::: pos.-specific C aa4a:aaa probability G ::4:8::: matrix T ::::3::: bits 2.0 ** * *** 1.8 ** * *** 1.6 ** * *** 1.4 ** * *** Relative 1.2 ** ***** Entropy 1.0 ** ***** (13.7 bits) 0.8 ** ***** 0.6 ** ***** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCCCGCCC consensus G T sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:96431018-96431098 15 2.87e-05 CCCAGAGCTT CCCCGCCC CGCACAACTA chr19:52490148-52490228 50 2.87e-05 TGTAAAATGG CCGCGCCC ATAGCCGTGG chr19:37663699-37663779 60 2.87e-05 GAGAACATGG CCGCGCCC TTATGGTGTT chr19:52408314-52408394 7 2.87e-05 ACATGT CCGCGCCC TGAGCCACGG chr15:40674999-40675079 54 2.87e-05 GCTCCCGAAG CCCCGCCC CTGGACAGAG chr4:170679196-170679276 10 2.87e-05 GCGTTGAGG CCCCGCCC ACTCCCGTGC chr19:39894602-39894682 8 2.87e-05 CCCACTC CCCCGCCC CTTGCGAGTG chr19:52511483-52511563 18 2.87e-05 TGCAAGATGG CCGCGCCC TCGTCGCCTT chr19:52430343-52430423 14 2.87e-05 GTTAAGATGG CCGCGCCC ATTGTGTCAT chr19:37701560-37701640 32 2.87e-05 GAGAATATAA CCGCGCCC TTATGGTGTT chr21:44457108-44457188 69 4.28e-05 CACGGCCTCG CCACGCCC AGGG chr19:33161022-33161102 57 4.28e-05 TGTAAACACA CCACGCCC TTAACAAGCA chr19:48763075-48763155 71 7.18e-05 ggacaggggg cccctccc tg chr19:49379707-49379787 43 7.18e-05 ggacaggggg cccctccc tgtttggcag chr12:45667701-45667781 68 8.59e-05 gcacaactga ccactccc tgctt chr7:30193997-30194077 48 8.59e-05 actctcttgg ccactccc agtttcccta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:96431018-96431098 2.9e-05 14_[+5]_58 chr19:52490148-52490228 2.9e-05 49_[+5]_23 chr19:37663699-37663779 2.9e-05 59_[+5]_13 chr19:52408314-52408394 2.9e-05 6_[+5]_66 chr15:40674999-40675079 2.9e-05 53_[+5]_19 chr4:170679196-170679276 2.9e-05 9_[+5]_63 chr19:39894602-39894682 2.9e-05 7_[+5]_65 chr19:52511483-52511563 2.9e-05 17_[+5]_55 chr19:52430343-52430423 2.9e-05 13_[+5]_59 chr19:37701560-37701640 2.9e-05 31_[+5]_41 chr21:44457108-44457188 4.3e-05 68_[+5]_4 chr19:33161022-33161102 4.3e-05 56_[+5]_16 chr19:48763075-48763155 7.2e-05 70_[+5]_2 chr19:49379707-49379787 7.2e-05 42_[+5]_30 chr12:45667701-45667781 8.6e-05 67_[+5]_5 chr7:30193997-30194077 8.6e-05 47_[+5]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCVCGCCC width=8 seqs=16 chr9:96431018-96431098 ( 15) CCCCGCCC 1 chr19:52490148-52490228 ( 50) CCGCGCCC 1 chr19:37663699-37663779 ( 60) CCGCGCCC 1 chr19:52408314-52408394 ( 7) CCGCGCCC 1 chr15:40674999-40675079 ( 54) CCCCGCCC 1 chr4:170679196-170679276 ( 10) CCCCGCCC 1 chr19:39894602-39894682 ( 8) CCCCGCCC 1 chr19:52511483-52511563 ( 18) CCGCGCCC 1 chr19:52430343-52430423 ( 14) CCGCGCCC 1 chr19:37701560-37701640 ( 32) CCGCGCCC 1 chr21:44457108-44457188 ( 69) CCACGCCC 1 chr19:33161022-33161102 ( 57) CCACGCCC 1 chr19:48763075-48763155 ( 71) CCCCTCCC 1 chr19:49379707-49379787 ( 43) CCCCTCCC 1 chr12:45667701-45667781 ( 68) CCACTCCC 1 chr7:30193997-30194077 ( 48) CCACTCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1543 E= 1.2e+003 -1064 202 -1064 -1064 -1064 202 -1064 -1064 3 60 57 -1064 -1064 202 -1064 -1064 -1064 -1064 157 -3 -1064 202 -1064 -1064 -1064 202 -1064 -1064 -1064 202 -1064 -1064 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 16 E= 1.2e+003 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.375000 0.375000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.750000 0.250000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCGCCC MEME-5 regular expression -------------------------------------------------------------------------------- CC[CGA]C[GT]CCC -------------------------------------------------------------------------------- Time 18.87 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:23145037-23145117 3.80e-02 46_[+1(3.06e-05)]_26 chr15:22984729-22984809 5.70e-02 80 chr2:44046093-44046173 5.09e-03 16_[+1(3.06e-05)]_56 chr19:52552573-52552653 5.34e-01 80 chr3:40378357-40378437 1.22e-02 59_[+1(9.15e-05)]_13 chr15:30107728-30107808 1.43e-02 27_[+1(4.57e-05)]_45 chr9:124041193-124041273 8.31e-02 28_[+1(6.10e-05)]_44 chr6:36793379-36793459 2.73e-03 49_[+1(4.57e-05)]_23 chr19:6276547-6276627 1.80e-01 80 chrX:154047321-154047401 5.58e-01 80 chr3:169663254-169663334 7.20e-01 80 chr1:150900326-150900406 7.79e-01 80 chr1:233809914-233809994 1.32e-01 80 chr16:9391486-9391566 2.54e-02 9_[+1(3.06e-05)]_63 chr5:54082270-54082350 2.54e-03 26_[+1(9.15e-05)]_46 chr15:85458375-85458455 3.46e-02 80 chr16:87498422-87498502 9.79e-03 42_[+4(9.21e-05)]_30 chr6:150400034-150400114 5.88e-02 9_[+3(1.61e-05)]_63 chr2:203815465-203815545 2.54e-02 80 chr3:57134209-57134289 1.35e-01 33_[+1(6.10e-05)]_39 chr7:44999327-44999407 1.49e-01 46_[+1(6.10e-05)]_26 chr7:74074274-74074354 4.85e-01 80 chr15:40373175-40373255 5.07e-02 44_[+3(9.63e-05)]_28 chr2:39444141-39444221 7.85e-01 80 chr7:44331132-44331212 4.14e-02 80 chr1:16521728-16521808 4.81e-03 54_[+1(1.52e-05)]_18 chr1:11990008-11990088 2.93e-02 35_[+1(6.10e-05)]_37 chr8:96113881-96113961 2.76e-02 56_[+3(9.63e-05)]_16 chr21:38818909-38818989 5.53e-03 36_[+1(1.52e-05)]_36 chr1:22448203-22448283 1.84e-01 23_[+3(7.98e-05)]_49 chr1:100905818-100905898 6.10e-02 80 chr11:5266072-5266152 8.71e-02 80 chr8:107072808-107072888 3.77e-03 32_[+1(1.52e-05)]_40 chr19:37701560-37701640 4.25e-03 31_[+5(2.87e-05)]_41 chr1:201278740-201278820 2.80e-01 80 chr3:196377932-196378012 4.78e-05 19_[+4(1.52e-05)]_53 chr2:223699991-223700071 2.13e-02 80 chr3:45615758-45615838 1.68e-01 9_[+2(7.43e-05)]_63 chr6:138132685-138132765 1.15e-02 42_[+4(1.52e-05)]_30 chr8:53625752-53625832 1.95e-02 80 chr5:139570283-139570363 1.53e-01 80 chr2:75089565-75089645 5.14e-02 26_[+2(1.49e-05)]_46 chr8:28745629-28745709 1.96e-02 80 chr20:47654644-47654724 4.99e-04 9_[+1(6.10e-05)]_35_[+3(1.61e-05)]_\ 20 chr11:12136234-12136314 1.76e-02 36_[+2(2.93e-05)]_36 chr6:160403068-160403148 8.75e-03 21_[+1(3.06e-05)]_51 chr7:142661732-142661812 1.07e-02 80 chr9:115819002-115819082 8.42e-02 80 chr2:131862102-131862182 1.92e-02 80 chr1:150936859-150936939 9.15e-01 80 chr1:150902487-150902567 8.11e-01 80 chr17:25659665-25659745 4.04e-03 65_[+1(1.52e-05)]_7 chr17:4625073-4625153 1.00e-01 80 chr15:89019956-89020036 2.46e-02 58_[+1(1.52e-05)]_14 chr12:104613960-10461404 3.36e-01 80 chr5:179989878-179989958 2.55e-05 5_[+3(3.21e-05)]_10_[+4(9.21e-05)]_\ 41_[+1(9.15e-05)] chr9:134280055-134280135 1.63e-03 24_[+1(1.52e-05)]_48 chr7:132915520-132915600 1.72e-01 80 chr19:52430343-52430423 5.38e-03 13_[+5(2.87e-05)]_59 chr6:126375642-126375722 7.76e-01 80 chr6:14890540-14890620 1.04e-02 4_[+1(1.52e-05)]_68 chrX:129728526-129728606 1.39e-02 23_[+2(2.93e-05)]_49 chr1:183885329-183885409 5.47e-04 23_[+1(3.06e-05)]_22_[+4(1.52e-05)]_\ 19 chr7:150904259-150904339 8.32e-03 24_[+2(7.43e-05)]_48 chr3:151593707-151593787 3.69e-01 80 chr8:29088140-29088220 1.38e-01 27_[+1(4.57e-05)]_45 chr13:114451305-11445138 3.60e-01 80 chr5:95161425-95161505 6.02e-03 71_[+3(6.44e-05)]_1 chr19:52511483-52511563 2.39e-02 17_[+5(2.87e-05)]_55 chr12:116561545-11656162 5.65e-01 80 chr1:150923849-150923929 6.92e-01 80 chr17:42236991-42237071 5.18e-05 8_[+4(4.59e-05)]_27_[+1(7.68e-05)]_\ 29 chr1:154293455-154293535 2.03e-01 80 chr5:127374501-127374581 7.74e-04 31_[+2(1.49e-05)]_22_[+4(4.59e-05)]_\ 11 chr5:148846109-148846189 6.40e-01 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53_[+4(7.68e-05)]_19 chr19:52490148-52490228 3.01e-02 49_[+5(2.87e-05)]_23 chr2:46553563-46553643 2.39e-01 80 chr16:27760337-27760417 2.90e-03 19_[+1(1.52e-05)]_34_[+4(9.21e-05)]_\ 11 chr1:235254118-235254198 1.88e-02 80 chr9:117247303-117247383 1.96e-01 40_[+1(6.10e-05)]_32 chr22:43500128-43500208 8.10e-05 11_[+4(4.59e-05)]_10_[+2(4.48e-05)]_\ 9_[+1(7.68e-05)]_26 chr6:157130279-157130359 2.03e-01 80 chr12:93623333-93623413 1.25e-02 22_[+2(8.94e-05)]_50 chr10:112617438-11261751 1.28e-01 29_[+3(3.21e-05)]_43 chr2:54801752-54801832 8.82e-03 1_[+4(1.52e-05)]_71 chr19:52430547-52430627 3.41e-01 80 chr19:49379707-49379787 4.35e-04 2_[+2(4.48e-05)]_32_[+5(7.18e-05)]_\ 30 chr21:44457108-44457188 4.36e-03 44_[+1(4.57e-05)]_16_[+5(4.28e-05)]_\ 4 chr10:48412264-48412344 3.00e-03 27_[+1(4.57e-05)]_45 chr17:42767745-42767825 5.43e-01 80 chr12:95571-95651 9.87e-01 80 chr17:80297098-80297178 2.29e-03 38_[+4(3.01e-05)]_34 chr17:27503764-27503844 4.02e-04 19_[+3(3.21e-05)]_38_[+1(1.52e-05)]_\ 7 chr1:180086556-180086636 9.86e-07 3_[+2(7.43e-05)]_19_[+3(1.61e-05)]_\ 29_[+1(1.52e-05)]_5 chr1:109159765-109159845 2.75e-03 34_[+2(4.48e-05)]_38 chr15:56332815-56332895 1.29e-03 5_[+4(3.01e-05)]_28_[+1(3.06e-05)]_\ 31 chr10:5724034-5724114 3.15e-02 80 chr16:85075889-85075969 2.56e-02 4_[+1(3.06e-05)]_68 chr15:29260993-29261073 9.82e-02 80 chr6:43811142-43811222 5.78e-02 44_[+3(1.61e-05)]_28 chr8:144973687-144973767 1.70e-01 80 chr7:157180026-157180106 7.25e-03 21_[+1(6.10e-05)]_51 chr17:72956980-72957060 4.77e-03 70_[+1(7.68e-05)]_2 chr1:230296861-230296941 1.97e-01 57_[+1(7.68e-05)]_15 chr20:47470641-47470721 1.48e-02 14_[+4(1.52e-05)]_58 chr13:26821857-26821937 5.87e-03 34_[+3(6.44e-05)]_26_[+2(2.93e-05)]_\ 4 chr10:70314951-70315031 3.09e-01 80 chr3:130791159-130791239 1.39e-02 80 chr8:102049427-102049507 3.10e-01 80 chr20:5037775-5037855 1.91e-04 5_[+1(3.06e-05)]_51_[+3(9.63e-05)]_\ 8 chr6:154841591-154841671 2.64e-02 36_[+3(1.61e-05)]_36 chr9:96431018-96431098 5.17e-03 14_[+5(2.87e-05)]_31_[+1(6.10e-05)]_\ 19 chr22:41050645-41050725 1.06e-04 46_[+2(1.49e-05)]_26 chr16:11227288-11227368 1.43e-03 12_[+1(1.52e-05)]_60 chr14:23298978-23299058 9.03e-01 80 chr2:170972511-170972591 9.26e-02 80 chr9:95640404-95640484 3.10e-01 80 chr16:31547141-31547221 7.40e-01 80 chr6:158034139-158034219 9.53e-03 66_[+1(7.68e-05)]_6 chr1:249120253-249120333 8.02e-01 80 chr1:40596746-40596826 3.88e-02 50_[+3(3.21e-05)]_22 chr2:234608944-234609024 6.77e-02 46_[+3(3.21e-05)]_26 chr19:48763075-48763155 2.41e-07 12_[+4(4.59e-05)]_10_[+2(4.48e-05)]_\ 5_[+4(1.52e-05)]_19_[+5(7.18e-05)]_2 chr6:155406933-155407013 1.24e-01 80 chr14:69658092-69658172 2.59e-01 80 chr2:20289672-20289752 7.85e-02 80 chr6:43905231-43905311 1.02e-03 25_[+3(3.21e-05)]_47 chr6:25974297-25974377 9.40e-03 [+3(9.63e-05)]_57_[+2(4.48e-05)]_7 chr1:43871011-43871091 4.39e-01 80 chr6:11393376-11393456 6.95e-01 80 chr7:86741350-86741430 1.00e-02 26_[+3(6.44e-05)]_46 chr1:150935764-150935844 2.69e-01 80 chr7:86740295-86740375 1.72e-02 80 chr12:13080339-13080419 1.26e-01 61_[+2(4.48e-05)]_11 chr11:108094340-10809442 1.66e-01 80 chr5:180671048-180671128 4.80e-01 80 chr15:43513494-43513574 1.41e-01 80 chr10:4983933-4984013 7.37e-01 80 chr11:78003344-78003424 1.31e-02 41_[+1(4.57e-05)]_31 chr20:524573-524653 5.21e-01 80 chr17:33213979-33214059 9.95e-02 80 chr11:59328612-59328692 3.49e-01 80 chr8:125663476-125663556 2.91e-02 72_[+1(7.68e-05)] chr7:106407634-106407714 9.32e-01 80 chr10:126109573-12610965 7.35e-04 7_[+2(1.49e-05)]_48_[+3(6.44e-05)]_\ 9 chr7:106593321-106593401 3.89e-03 9_[+2(5.98e-05)]_63 chr6:140087137-140087217 1.36e-01 8_[+4(9.21e-05)]_64 chr3:194030801-194030881 1.88e-01 80 chr8:68022159-68022239 1.10e-01 80 chr6:43766781-43766861 3.03e-02 19_[+1(4.57e-05)]_53 chrX:107800936-107801016 6.71e-04 56_[+1(3.06e-05)]_16 chr12:102799860-10279994 9.68e-02 80 chr1:59753885-59753965 1.07e-01 6_[+3(3.21e-05)]_66 chr19:52074286-52074366 9.69e-01 80 chr17:33212316-33212396 1.66e-01 32_[+2(7.43e-05)]_40 chr6:15897337-15897417 1.88e-02 30_[+1(1.52e-05)]_42 chr6:167364572-167364652 2.33e-06 4_[+4(4.59e-05)]_10_[+2(4.48e-05)]_\ [+1(1.52e-05)]_1_[+1(7.68e-05)]_33 chr18:3713365-3713445 4.69e-01 80 chr3:128444841-128444921 5.51e-01 80 chr19:14385742-14385822 2.59e-02 80 chr22:22139071-22139151 1.18e-01 57_[+2(2.93e-05)]_15 chr19:16771143-16771223 2.44e-01 80 chr3:71257528-71257608 1.41e-02 67_[+2(2.93e-05)]_5 chr9:140406327-140406407 1.11e-02 80 chr6:157814412-157814492 4.18e-01 80 chr12:40493397-40493477 4.86e-02 80 chr15:82234677-82234757 3.97e-02 27_[+3(6.44e-05)]_45 chr8:2965634-2965714 3.85e-02 72_[+2(7.43e-05)] chr6:33290826-33290906 3.09e-01 80 chr5:159435987-159436067 4.41e-01 80 chr16:84627679-84627759 3.26e-01 80 chr8:48572477-48572557 5.65e-03 80 chr11:58537751-58537831 6.92e-01 80 chr2:145277815-145277895 4.44e-02 80 chr1:8064930-8065010 5.61e-02 34_[+3(7.98e-05)]_38 chr1:247267783-247267863 2.23e-02 18_[+1(1.52e-05)]_54 chr7:73265947-73266027 2.25e-01 80 chr9:138876762-138876842 1.90e-02 17_[+3(1.61e-05)]_55 chr6:31794833-31794913 6.57e-01 80 chr10:81962997-81963077 5.67e-03 49_[+1(1.52e-05)]_23 chr1:54665605-54665685 9.60e-03 63_[+1(1.52e-05)]_9 chr7:30193997-30194077 1.08e-05 10_[+1(7.68e-05)]_7_[+2(1.49e-05)]_\ 14_[+5(8.59e-05)]_25 chr1:211786927-211787007 3.95e-02 80 chr11:75525851-75525931 2.55e-03 37_[+1(4.57e-05)]_35 chr5:171381009-171381089 1.89e-03 11_[+1(1.52e-05)]_61 chr16:89282853-89282933 2.39e-02 80 chr11:64653195-64653275 2.51e-02 80 chr5:67994143-67994223 2.94e-01 80 chr18:3603154-3603234 2.63e-02 80 chr16:85368634-85368714 5.54e-02 80 chr21:34588039-34588119 1.91e-02 44_[+1(3.06e-05)]_28 chr22:22146169-22146249 3.19e-02 80 chr12:45667701-45667781 1.96e-03 37_[+3(3.21e-05)]_22_[+5(8.59e-05)]_\ 5 chr19:39749083-39749163 9.09e-06 12_[+4(4.59e-05)]_10_[+2(4.48e-05)]_\ [+1(1.52e-05)]_1_[+1(7.68e-05)]_25 chr7:127478184-127478264 9.23e-02 80 chr12:76328409-76328489 2.46e-02 10_[+3(7.98e-05)]_62 chr19:36545315-36545395 2.90e-02 [+1(1.52e-05)]_64_[+1(7.68e-05)] chr13:22562125-22562205 3.29e-01 80 chr15:73767276-73767356 2.69e-01 80 chr3:193853849-193853929 8.62e-01 80 chr2:210852885-210852965 2.48e-03 80 chr9:134180518-134180598 5.16e-03 67_[+4(1.52e-05)]_5 chr11:33060954-33061034 1.07e-01 80 chr1:165812202-165812282 2.85e-01 80 chr3:170483356-170483436 5.54e-03 80 chr10:30479923-30480003 3.80e-02 80 chr10:85960906-85960986 2.14e-02 80 chr18:2571240-2571320 2.98e-01 80 chr1:226189852-226189932 2.02e-01 80 chr8:135844720-135844800 3.17e-02 80 chrX:106985198-106985278 6.31e-01 80 chr7:99291299-99291379 8.56e-02 80 chr2:152683429-152683509 7.98e-01 80 chr8:103666318-103666398 1.22e-01 80 chr4:122712282-122712362 3.69e-02 80 chr5:64777798-64777878 2.95e-01 80 chr6:35311374-35311454 4.50e-02 62_[+3(1.61e-05)]_10 chr7:102624254-102624334 1.08e-02 58_[+2(2.93e-05)]_14 chr1:25583239-25583319 1.12e-01 43_[+1(3.06e-05)]_29 chr10:135056541-13505662 7.06e-02 26_[+1(7.68e-05)]_46 chr7:73265337-73265417 8.60e-01 80 chr1:202974927-202975007 6.12e-02 80 chr1:31944558-31944638 2.12e-02 23_[+4(9.21e-05)]_49 chr4:109541578-109541658 6.20e-01 80 chr6:147217434-147217514 1.76e-02 72_[+2(2.93e-05)] chr5:67599709-67599789 1.49e-01 14_[+3(6.44e-05)]_58 chr19:47633937-47634017 2.76e-03 40_[+1(1.52e-05)]_32 chr2:38770185-38770265 1.97e-01 80 chr1:169162822-169162902 1.95e-02 41_[+2(1.49e-05)]_31 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************