******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/REST.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr9:140773201-140773281 1.0000 80 chr8:99439141-99439221 1.0000 80 chr13:28366588-28366668 1.0000 80 chr2:44243571-44243651 1.0000 80 chr19:55028834-55028914 1.0000 80 chr16:70896066-70896146 1.0000 80 chr7:140797368-140797448 1.0000 80 chr16:17232850-17232930 1.0000 80 chr8:142970840-142970920 1.0000 80 chr2:101087523-101087603 1.0000 80 chr3:139516734-139516814 1.0000 80 chr20:44669685-44669765 1.0000 80 chr17:29721748-29721828 1.0000 80 chr11:116250303-11625038 1.0000 80 chr16:9025866-9025946 1.0000 80 chr4:147558181-147558261 1.0000 80 chr15:91730640-91730720 1.0000 80 chr5:14628625-14628705 1.0000 80 chr1:165918737-165918817 1.0000 80 chr5:167955685-167955765 1.0000 80 chr10:102440641-10244072 1.0000 80 chr20:41816551-41816631 1.0000 80 chr5:132901835-132901915 1.0000 80 chr6:154360632-154360712 1.0000 80 chr9:140779157-140779237 1.0000 80 chr3:131753947-131754027 1.0000 80 chr16:12755732-12755812 1.0000 80 chr11:72387976-72388056 1.0000 80 chr17:74906137-74906217 1.0000 80 chr12:108608423-10860850 1.0000 80 chr22:37040441-37040521 1.0000 80 chr3:10795819-10795899 1.0000 80 chr5:141114558-141114638 1.0000 80 chr16:8076611-8076691 1.0000 80 chr22:43845278-43845358 1.0000 80 chr16:13130612-13130692 1.0000 80 chr12:100933142-10093322 1.0000 80 chr11:122852632-12285271 1.0000 80 chr9:134674724-134674804 1.0000 80 chr11:134897528-13489760 1.0000 80 chr20:61810310-61810390 1.0000 80 chr2:207507534-207507614 1.0000 80 chr11:113862026-11386210 1.0000 80 chr13:79163516-79163596 1.0000 80 chr15:73639213-73639293 1.0000 80 chr10:102085080-10208516 1.0000 80 chr8:62408858-62408938 1.0000 80 chr14:100952983-10095306 1.0000 80 chr19:34175264-34175344 1.0000 80 chr2:29516856-29516936 1.0000 80 chr12:3601510-3601590 1.0000 80 chr20:859545-859625 1.0000 80 chr12:131011526-13101160 1.0000 80 chr4:147565141-147565221 1.0000 80 chr14:97406506-97406586 1.0000 80 chr16:26328551-26328631 1.0000 80 chr6:12752097-12752177 1.0000 80 chr1:94236356-94236436 1.0000 80 chr19:34258928-34259008 1.0000 80 chr2:27531441-27531521 1.0000 80 chr10:79088310-79088390 1.0000 80 chr1:58926307-58926387 1.0000 80 chr19:39714492-39714572 1.0000 80 chr20:34973071-34973151 1.0000 80 chr2:242006562-242006642 1.0000 80 chr7:154106944-154107024 1.0000 80 chr8:24770306-24770386 1.0000 80 chr16:750750-750830 1.0000 80 chr10:16654405-16654485 1.0000 80 chr8:69084597-69084677 1.0000 80 chr16:25758639-25758719 1.0000 80 chr15:74557541-74557621 1.0000 80 chr1:210306106-210306186 1.0000 80 chrX:106568016-106568096 1.0000 80 chr1:183386046-183386126 1.0000 80 chr11:133817321-13381740 1.0000 80 chr16:83735300-83735380 1.0000 80 chr3:42341626-42341706 1.0000 80 chr1:1951123-1951203 1.0000 80 chr7:105054636-105054716 1.0000 80 chr19:13574280-13574360 1.0000 80 chr20:61747924-61748004 1.0000 80 chr12:118870080-11887016 1.0000 80 chr5:174749086-174749166 1.0000 80 chr16:9133229-9133309 1.0000 80 chr14:78996554-78996634 1.0000 80 chrX:18165263-18165343 1.0000 80 chr9:34413386-34413466 1.0000 80 chr2:131513839-131513919 1.0000 80 chr1:18246084-18246164 1.0000 80 chr1:210111107-210111187 1.0000 80 chr13:93970948-93971028 1.0000 80 chr5:139188309-139188389 1.0000 80 chr10:132722546-13272262 1.0000 80 chr8:10950087-10950167 1.0000 80 chr12:65220257-65220337 1.0000 80 chr1:11533847-11533927 1.0000 80 chr21:43396172-43396252 1.0000 80 chr20:40283683-40283763 1.0000 80 chr1:202626514-202626594 1.0000 80 chr20:37314656-37314736 1.0000 80 chr18:55021279-55021359 1.0000 80 chr11:10400716-10400796 1.0000 80 chr9:104299380-104299460 1.0000 80 chr8:28595105-28595185 1.0000 80 chr5:133877561-133877641 1.0000 80 chr15:77994990-77995070 1.0000 80 chr1:37486424-37486504 1.0000 80 chr14:74892726-74892806 1.0000 80 chr1:7135550-7135630 1.0000 80 chr5:170108324-170108404 1.0000 80 chr2:119924803-119924883 1.0000 80 chr12:119071040-11907112 1.0000 80 chr17:45863220-45863300 1.0000 80 chr5:63259080-63259160 1.0000 80 chr5:16179027-16179107 1.0000 80 chr18:5197154-5197234 1.0000 80 chr17:33124872-33124952 1.0000 80 chr8:67089840-67089920 1.0000 80 chr2:73507188-73507268 1.0000 80 chr8:35289931-35290011 1.0000 80 chr5:176231092-176231172 1.0000 80 chr19:5404212-5404292 1.0000 80 chr6:30279007-30279087 1.0000 80 chr9:34494105-34494185 1.0000 80 chr15:89962758-89962838 1.0000 80 chr8:40686491-40686571 1.0000 80 chr5:6328413-6328493 1.0000 80 chr20:43405795-43405875 1.0000 80 chr19:54406483-54406563 1.0000 80 chr20:43408953-43409033 1.0000 80 chr12:113229322-11322940 1.0000 80 chr20:62092876-62092956 1.0000 80 chrX:48853508-48853588 1.0000 80 chr17:64825802-64825882 1.0000 80 chr7:135020679-135020759 1.0000 80 chr5:132946811-132946891 1.0000 80 chr12:95273502-95273582 1.0000 80 chr14:75127731-75127811 1.0000 80 chr3:38439019-38439099 1.0000 80 chr14:58332221-58332301 1.0000 80 chr6:105391834-105391914 1.0000 80 chr11:119389638-11938971 1.0000 80 chr14:77675187-77675267 1.0000 80 chr11:116476408-11647648 1.0000 80 chr9:140033689-140033769 1.0000 80 chr2:98963102-98963182 1.0000 80 chr7:104192710-104192790 1.0000 80 chr16:25513017-25513097 1.0000 80 chr12:108797877-10879795 1.0000 80 chr12:113503168-11350324 1.0000 80 chr10:85984583-85984663 1.0000 80 chr7:8482568-8482648 1.0000 80 chr12:119083184-11908326 1.0000 80 chr12:58154322-58154402 1.0000 80 chr14:93380561-93380641 1.0000 80 chr22:45371586-45371666 1.0000 80 chr1:50774668-50774748 1.0000 80 chr20:61713793-61713873 1.0000 80 chr10:72075756-72075836 1.0000 80 chr5:141263099-141263179 1.0000 80 chr5:52912930-52913010 1.0000 80 chr20:17207370-17207450 1.0000 80 chr19:38945849-38945929 1.0000 80 chr12:103218386-10321846 1.0000 80 chr11:1422974-1423054 1.0000 80 chr22:42690535-42690615 1.0000 80 chr16:68478116-68478196 1.0000 80 chr8:55914031-55914111 1.0000 80 chr1:110761519-110761599 1.0000 80 chr12:113918047-11391812 1.0000 80 chr22:50309379-50309459 1.0000 80 chr12:119950850-11995093 1.0000 80 chr2:215275811-215275891 1.0000 80 chr8:28514893-28514973 1.0000 80 chr8:26372685-26372765 1.0000 80 chr4:8677243-8677323 1.0000 80 chr1:30448091-30448171 1.0000 80 chr10:73341937-73342017 1.0000 80 chr4:158141513-158141593 1.0000 80 chr20:61701345-61701425 1.0000 80 chr7:37092428-37092508 1.0000 80 chr16:25276093-25276173 1.0000 80 chr6:116918137-116918217 1.0000 80 chr22:50129123-50129203 1.0000 80 chr15:79087541-79087621 1.0000 80 chr12:53135314-53135394 1.0000 80 chr19:15649750-15649830 1.0000 80 chr2:219826674-219826754 1.0000 80 chr22:37859099-37859179 1.0000 80 chr22:48563212-48563292 1.0000 80 chr6:159688358-159688438 1.0000 80 chr1:18582955-18583035 1.0000 80 chr11:117467960-11746804 1.0000 80 chr16:23186111-23186191 1.0000 80 chr20:57717398-57717478 1.0000 80 chr7:152759145-152759225 1.0000 80 chr20:56623321-56623401 1.0000 80 chr19:7676572-7676652 1.0000 80 chr9:124818943-124819023 1.0000 80 chr17:10778787-10778867 1.0000 80 chr22:39220673-39220753 1.0000 80 chr15:68113420-68113500 1.0000 80 chr7:63635501-63635581 1.0000 80 chr5:13867077-13867157 1.0000 80 chr8:142577198-142577278 1.0000 80 chr2:59061690-59061770 1.0000 80 chr1:37432023-37432103 1.0000 80 chr6:90269379-90269459 1.0000 80 chr18:75269147-75269227 1.0000 80 chr5:92948380-92948460 1.0000 80 chr12:132905875-13290595 1.0000 80 chr19:36466679-36466759 1.0000 80 chr12:67587649-67587729 1.0000 80 chr19:10120207-10120287 1.0000 80 chr15:70268880-70268960 1.0000 80 chr5:175170825-175170905 1.0000 80 chr9:139093728-139093808 1.0000 80 chr3:51963611-51963691 1.0000 80 chr7:77455790-77455870 1.0000 80 chr4:170745027-170745107 1.0000 80 chr1:93521938-93522018 1.0000 80 chr8:50824223-50824303 1.0000 80 chr5:123882502-123882582 1.0000 80 chr2:171670833-171670913 1.0000 80 chr2:36655028-36655108 1.0000 80 chr7:131955444-131955524 1.0000 80 chr2:226264846-226264926 1.0000 80 chr11:129835293-12983537 1.0000 80 chr9:136474571-136474651 1.0000 80 chr7:32467444-32467524 1.0000 80 chr3:11006422-11006502 1.0000 80 chr2:11810052-11810132 1.0000 80 chr20:31797699-31797779 1.0000 80 chr9:137990390-137990470 1.0000 80 chr11:17756618-17756698 1.0000 80 chr22:46242999-46243079 1.0000 80 chr8:56015523-56015603 1.0000 80 chr19:51198549-51198629 1.0000 80 chr3:123936527-123936607 1.0000 80 chr17:72187084-72187164 1.0000 80 chr2:73110635-73110715 1.0000 80 chr11:33522567-33522647 1.0000 80 chr9:19720534-19720614 1.0000 80 chr10:71327751-71327831 1.0000 80 chr8:142902167-142902247 1.0000 80 chr1:34966192-34966272 1.0000 80 chr2:166094963-166095043 1.0000 80 chr19:3307486-3307566 1.0000 80 chr2:133246843-133246923 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_REST/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/REST.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.199 C 0.303 G 0.297 T 0.2 Background letter frequencies (from file dataset with add-one prior applied): A 0.199 C 0.303 G 0.297 T 0.2 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GGTGCTGA MEME-1 width = 8 sites = 155 llr = 1267 E-value = 3.7e-167 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:11:::7 pos.-specific C :::1a::: probability G 9a:7::a1 matrix T ::9::a:1 bits 2.3 * 2.1 * 1.9 ** * 1.6 ** *** Relative 1.4 ** *** Entropy 1.2 *** *** (11.8 bits) 0.9 *** **** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGTGCTGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:34966192-34966272 48 1.88e-05 AGCTGTCCAC GGTGCTGA CACCCGCCGT chr8:142902167-142902247 41 1.88e-05 CTCTGTCCAT GGTGCTGA CCCCTCACCG chr11:33522567-33522647 26 1.88e-05 TGCTGTCCGT GGTGCTGA AACATCACTG chr17:72187084-72187164 43 1.88e-05 CCCTGTCCGT GGTGCTGA CCCACAGGCC chr9:137990390-137990470 32 1.88e-05 CTTAGGGAGT GGTGCTGA AGTGGACAGC chr9:136474571-136474651 42 1.88e-05 AGCTGTCCCT GGTGCTGA CGGCTCGTCC chr11:129835293-12983537 53 1.88e-05 CCAGCTGGCA GGTGCTGA CAGCTCTGGT chr7:131955444-131955524 48 1.88e-05 CTCAAGTTCT GGTGCTGA AATACAGAAC chr19:10120207-10120287 49 1.88e-05 CCCTGTCCAT GGTGCTGA TCGCGGCTCT chr6:90269379-90269459 48 1.88e-05 CCAATGCTCT GGTGCTGA CAGGCCTGTC chr7:63635501-63635581 22 1.88e-05 CTCTGTCCAT GGTGCTGA CCAAGCCAGC chr15:68113420-68113500 49 1.88e-05 TCCGTAGCTT GGTGCTGA ACGGGGACGC chr22:39220673-39220753 28 1.88e-05 CCCTGTCCAG GGTGCTGA ATTCCTTCTA chr1:18582955-18583035 45 1.88e-05 AGCTGTCCGT GGTGCTGA TAGTTCCCGT chr22:48563212-48563292 46 1.88e-05 AGCTCTCCAA GGTGCTGA AGCATCTGGT chr22:37859099-37859179 37 1.88e-05 CTCTGTCCGC GGTGCTGA ACTATCCTCT chr2:219826674-219826754 37 1.88e-05 AACTGTCCGA GGTGCTGA GCTGGGGCGG chr16:25276093-25276173 34 1.88e-05 CTCTGTCCAT GGTGCTGA GCCACCAGCC chr20:61701345-61701425 48 1.88e-05 CCCTCTCCAA GGTGCTGA CGACACCATG chr4:158141513-158141593 39 1.88e-05 CGCTGTCCTC GGTGCTGA AAGGCCGAGG chr4:8677243-8677323 46 1.88e-05 AGCTGTCCCC GGTGCTGA CCTCAGTCTG chr2:215275811-215275891 37 1.88e-05 CGCTGTCCGT GGTGCTGA GGAATTCCCG chr12:113918047-11391812 34 1.88e-05 AGCTGTCCGC GGTGCTGA ATCGGCGGCG chr1:110761519-110761599 42 1.88e-05 TGCTGTCCAG GGTGCTGA GACCCTCCTG chr8:55914031-55914111 37 1.88e-05 CACTGTCCAT GGTGCTGA GCATAGCACG chr20:17207370-17207450 45 1.88e-05 GGAGCTCTCC GGTGCTGA AAGGGGCGGG chr5:52912930-52913010 43 1.88e-05 CCACCAGTTT GGTGCTGA TAGCTTCAAA chr22:45371586-45371666 32 1.88e-05 TGCTGTCCGT GGTGCTGA ACCAGCAGGG chr2:98963102-98963182 54 1.88e-05 CGCAGCCCCC GGTGCTGA AACGGGCCGC chr11:116476408-11647648 31 1.88e-05 CCCTGTCCAA GGTGCTGA TGCTTTTCTT chr14:77675187-77675267 43 1.88e-05 TGCTGTCCAT GGTGCTGA GAGCCCAGCT chr7:135020679-135020759 35 1.88e-05 TCTTGTCCAT GGTGCTGA CATCCTAGGA chr12:113229322-11322940 43 1.88e-05 CGCTGTCCGT GGTGCTGA CCGCCAATCC chr20:43408953-43409033 43 1.88e-05 AACTGTCCGT GGTGCTGA CTGAGCACAG chr15:89962758-89962838 40 1.88e-05 TCCTCCCAGT GGTGCTGA AACTCGGGCT chr8:35289931-35290011 46 1.88e-05 TGCTGTCCAG GGTGCTGA AAAGCCCCAC chr8:67089840-67089920 50 1.88e-05 CGCTGTCCGC GGTGCTGA AGCGCCTGGG chr5:16179027-16179107 52 1.88e-05 CGCTGTCCGT GGTGCTGA AAGCTTGACC chr12:119071040-11907112 43 1.88e-05 agctgtccct ggtgctga agaatcagcc chr1:37486424-37486504 49 1.88e-05 TGCTCTCCGT GGTGCTGA ACACAGAGGT chr8:28595105-28595185 45 1.88e-05 AGCTGTCCAT GGTGCTGA CAGGTGCTGC chr18:55021279-55021359 35 1.88e-05 CGCTGTCCGC GGTGCTGA TTCCCTGGTC chr20:37314656-37314736 33 1.88e-05 AGCTGTCCGA GGTGCTGA CGGCTGGGCG chr2:131513839-131513919 36 1.88e-05 AGCTGACCGT GGTGCTGA GCGCGGCTCG chr9:34413386-34413466 43 1.88e-05 CGCTCTCCGT GGTGCTGA ACAATCTTGC chr1:1951123-1951203 58 1.88e-05 CCGCCGTCCT GGTGCTGA ACCTGGGCTG chr15:74557541-74557621 37 1.88e-05 TGCTGTCCCT GGTGCTGA AACCCCTTGT chr2:242006562-242006642 46 1.88e-05 CACAGACCGG GGTGCTGA GTTGCCGGGA chr2:27531441-27531521 38 1.88e-05 GGCTGTCCAT GGTGCTGA CCCCGTCCTC chr6:12752097-12752177 42 1.88e-05 CTCCCTTGGT GGTGCTGA AGCGAGACAG chr14:97406506-97406586 44 1.88e-05 CTCTGTCCCT GGTGCTGA CCAACCACCC chr2:29516856-29516936 41 1.88e-05 CCACAAAGTA GGTGCTGA ATAGCTGAAG chr14:100952983-10095306 39 1.88e-05 CGCTGTCCCA GGTGCTGA ACCTTCTGGC chr13:79163516-79163596 36 1.88e-05 AGCTGGCCGC GGTGCTGA AAACCTTGCG chr9:134674724-134674804 47 1.88e-05 AGCTGTCCGT GGTGCTGA AGCACAACCA chr11:122852632-12285271 47 1.88e-05 AGCTGTCCGC GGTGCTGA ACACCACCGG chr22:37040441-37040521 40 1.88e-05 TGCTCTCCAA GGTGCTGA AGCAAGTGGG chr12:108608423-10860850 43 1.88e-05 GGCTGTCCAT GGTGCTGA CCACTGCACT chr11:72387976-72388056 38 1.88e-05 CTCTCTCCAG GGTGCTGA ACCCTGCGAG chr16:12755732-12755812 37 1.88e-05 CGCTGTCCAA GGTGCTGA ATACCGTACT chr9:140779157-140779237 43 1.88e-05 CGCTGTCCAT GGTGCTGA GTGTGTCGGC chr5:167955685-167955765 46 1.88e-05 CGCTGTCCCT GGTGCTGA CTAAACCCTA chr5:14628625-14628705 44 1.88e-05 AGCTGTCTGT GGTGCTGA ACAGGATGCA chr11:116250303-11625038 42 1.88e-05 TGCTGTCCAT GGTGCTGA CCTGGGAAGC chr20:44669685-44669765 40 1.88e-05 CGCTGTCCAC GGTGCTGA AACACAGCAT chr3:139516734-139516814 47 1.88e-05 CGCTGTCCTT GGTGCTGA AGCATCTTTT chr2:101087523-101087603 43 1.88e-05 AGCTGTCCGA GGTGCTGA CCGGGTGCGG chr9:140773201-140773281 50 1.88e-05 CGCTGTCCGC GGTGCTGA CGGCCGCCCG chr20:57717398-57717478 45 3.79e-05 AGCTGTCCTA GGTCCTGA ACAGCCTTCT chr22:50129123-50129203 40 3.79e-05 CGCTGTCCGA GGTCCTGA ACGTCTCTGG chr19:38945849-38945929 40 3.79e-05 TGCTCTCCAT GGTCCTGA ATTGCATAGA chr5:141263099-141263179 52 3.79e-05 CAGCGCCTCG GGTCCTGA CGGACCGCTG chr12:119083184-11908326 44 3.79e-05 CGCTCTCCAA GGTCCTGA AGCAGTGTCT chr8:40686491-40686571 26 3.79e-05 CCTTGTCCAT GGTCCTGA GGAGCCCACG chr1:210111107-210111187 30 3.79e-05 ACCTGTCCAT GGTCCTGA CCACATCATT chr10:16654405-16654485 45 3.79e-05 CTCTGTCCAT GGTCCTGA ACAGGCAGCT chr7:154106944-154107024 51 3.79e-05 CGCTCTCCAA GGTCCTGA TTTTGAAAGG chr10:79088310-79088390 39 3.79e-05 CCCTGTCCGT GGTCCTGA AAGAGACAAG chr19:34258928-34259008 38 3.79e-05 AGCTGTCCAG GGTCCTGA CGTGCAGCCC chr12:131011526-13101160 36 3.79e-05 TGCTGTCCAG GGTCCTGA TGGTCACTGA chr7:140797368-140797448 56 3.79e-05 gtctgtccat ggtcctga aatctttagc chr22:46242999-46243079 26 5.68e-05 ACACCCTCTC GGTGCTGT CCAAGGTTCT chr5:176231092-176231172 25 5.68e-05 agaaatgctg ggtgctgt CCTTGGTCCT chr16:70896066-70896146 28 5.68e-05 AGTGGTCCAT GGTGCTGT CCAGGGTGCT chr5:175170825-175170905 40 6.93e-05 TGCTATCCAA GGTACTGA GATCCCCCCA chr6:116918137-116918217 50 6.93e-05 TGCTGTCCAC GGTACTGA ACCATCAATG chr1:30448091-30448171 43 6.93e-05 CTCTGTCCAT GGTACTGA AACAGGATTC chr10:85984583-85984663 42 6.93e-05 CGCTGTCCAT GGTACTGA GCAGAGCTTG chr19:5404212-5404292 34 6.93e-05 CGCTGTCCGT GGTACTGA ACGGTGCTGG chr1:210306106-210306186 32 6.93e-05 AACTGTCCAT GGTACTGA CAAGTCCCTA chr16:17232850-17232930 47 6.93e-05 TGCTGTCCAT GGTACTGA ACCAGGTGCC chr2:133246843-133246923 39 1.16e-04 CGCTGTCCGT GGTGCTGG GCTTGGTGCC chr5:92948380-92948460 17 1.16e-04 CGCTGTCCAT GGTGCTGG GGAGAGCGCG chr17:10778787-10778867 34 1.16e-04 AGCTCTCCAA GGTGCTGG AGAGAGGCCC chr22:42690535-42690615 47 1.16e-04 TGCTGTCCAG GGTGCTGG GCCCAGCGGT chr12:58154322-58154402 48 1.16e-04 TGCTGTCCAT GGTGCTGG CATCCAGACC chr12:108797877-10879795 51 1.16e-04 TGCTATCCGT GGTGCTGG ATCTGGCATC chr17:45863220-45863300 50 1.16e-04 CGCTGTCCAT GGTGCTGG AGGCTGCAAG chr16:26328551-26328631 37 1.16e-04 CGCTATCCAA GGTGCTGG CCACCTTACC chr8:62408858-62408938 42 1.16e-04 AGCTGTCCAA GGTGCTGG AGGGAGGTTG chr20:61810310-61810390 41 1.16e-04 CGCTGTCCGC GGTGCTgg cggcggggcg chr12:100933142-10093322 41 1.16e-04 cactgtccaa ggtgctgg agtccctgag chr9:124818943-124819023 38 1.29e-04 AGCTCTCCAG AGTGCTGA ACAGACTGCC chr16:23186111-23186191 50 1.29e-04 TGCTGTCCGC AGTGCTGA TATCTAAAGC chr6:105391834-105391914 42 1.29e-04 CGCTGGCCAC AGTGCTGA ATCAAGACAG chr16:9133229-9133309 43 1.29e-04 CCCTGTCCAC AGTGCTGA ATCTTCATGG chr17:74906137-74906217 46 1.29e-04 CCCGAGTGCT AGTGCTGA ACCCACAGAT chr15:70268880-70268960 37 1.41e-04 CTCTGTCCAT GGTTCTGA ACCGTTCTTT chr19:54406483-54406563 43 1.41e-04 CGCTGTCCAT GGTTCTGA AGTGTTGTCT chr1:11533847-11533927 41 1.41e-04 CACTGTCCAT GGTTCTGA AACACCCCAG chr1:50774668-50774748 58 1.70e-04 ATAGCTCCAT GGTGCTGC CCCCAAGGCC chr8:24770306-24770386 46 1.70e-04 CGCTGTCCTT GGTGCTGC CGGCGCCATA chr19:39714492-39714572 52 1.70e-04 GCAGCCCAGT GGTGCTGC CTTCCCGGCA chr12:67587649-67587729 9 1.88e-04 CAAGAGAT GGTGGTGA ATGGGGTCAG chr2:119924803-119924883 42 2.20e-04 CGCTGTCCGT GGTGCTAA TGGCTGTGGC chr21:43396172-43396252 34 2.20e-04 CGCTCTCCAG GGTCCTGT CCTCTGCTTC chr1:165918737-165918817 44 2.20e-04 AGCTGTCCAG GGTCCTGT GGCTGGGGAG chr3:11006422-11006502 63 2.80e-04 CCAAAGGCGT GGTCCTGG CCCTGGTTGC chr7:152759145-152759225 14 2.80e-04 catggtccct ggacctga tttcagcact chr2:73110635-73110715 24 3.31e-04 GTAAAAGACG GGAGCTGT CCAGCATGGA chr11:17756618-17756698 36 3.31e-04 GCGACCGCCG GGAGCTGT CCCTTCAGCA chr2:171670833-171670913 45 3.31e-04 CGCTGTCCTT CGTGCTGA AAGATCTATG chr7:77455790-77455870 62 3.31e-04 ggtggctgct ggagctgt cgtcattaaa chr12:132905875-13290595 40 3.31e-04 GGGCTCGGCC GGAGCTGT CCCTTCAGCA chr11:1422974-1423054 51 3.31e-04 CAGCACCAGC CGTGCTGA AGTCTGCAGC chr12:103218386-10321846 34 3.31e-04 CCACAGGGCG GGAGCTGT CCGTGGTTCT chr9:140033689-140033769 3 3.31e-04 TC GGAGCTGT GCCCGGCCCC chr11:119389638-11938971 29 3.31e-04 ggagtgggtg ggagCTGT CCATGGTTCT chr17:64825802-64825882 30 3.31e-04 AGCCCTGCAG GGAGCTGT CCAGATGCTG chr5:170108324-170108404 44 3.31e-04 CGCTGTCCGT CGTGCTGA AATGTGGTGC chr9:104299380-104299460 51 3.31e-04 CCACCACAGC TGTGCTGA AATCTGGCAG chr20:40283683-40283763 29 3.31e-04 GGGCCACTGG GGAGCTGT CCATGGTTTG chr15:91730640-91730720 46 3.31e-04 CACTGTCCAA TGTGCTGA AAGCTGCTCC chr8:99439141-99439221 27 3.31e-04 CGAGGCACGC GGAGCTGT CCGTTCAGCA chr4:170745027-170745107 40 3.62e-04 AGCTATCCAA GGTACTGG CCTCTTCCAT chr20:56623321-56623401 45 3.62e-04 TGCTGTCCAT GGTACTGG CAAGAAGCAT chr1:58926307-58926387 45 3.75e-04 AGCTGTCCGT AGTCCTGA ATCTCATTGC chr8:10950087-10950167 25 4.15e-04 ACGTTCGTAG GGAGCTGG CCATGGTCCT chr19:55028834-55028914 4 4.24e-04 TAC AGTACTGA CTGGGATGCT chr9:19720534-19720614 57 4.80e-04 AGCTGTCCAT GGTGCTTA AGAATTTTCC chr10:102085080-10208516 5 4.80e-04 ATGG AGAGCTGA GACATCAGCG chr16:25513017-25513097 51 5.41e-04 TGCTCTCCAT GGTCCTGC CCAGCATAGC chr3:131753947-131754027 57 5.41e-04 CGCTCTCCGT GGTCCTGC CGCGCCCGCA chr3:51963611-51963691 19 6.19e-04 CATTGGGGAA GGTGGTGT TCAGCACTGG chr2:44243571-44243651 30 6.19e-04 CTTAGCCGAT GGTGGTGT GTCAGCACCA chr5:123882502-123882582 28 6.72e-04 AACTCCCTCG GGTGCTAT CTCAGCACCA chr10:73341937-73342017 38 6.72e-04 cGCTGTCCat ggtagtga cctctagctg chr15:77994990-77995070 11 7.26e-04 CCGGCCCCAT GGTGGTGG TTTGGTTCAG chr2:226264846-226264926 43 8.28e-04 AACTATCCAA GGTGCTAG AACGCTGGCA chrX:48853508-48853588 24 8.28e-04 CAGCAATCCA GGACCTGT TTCAGCACCA chr1:37432023-37432103 60 9.26e-04 GCTCCAGCAA GGTTCTGC TTGGCTAAGG chr9:34494105-34494185 73 9.26e-04 TCGGGGAAGT GGTTCTGC chr10:132722546-13272262 60 9.75e-04 CCAGGCCGCA GGACCTGG GGAGGGGCCA chr20:34973071-34973151 58 9.75e-04 AGCTCCCAGT GGACCTGG GCCTCGGCTG chr11:117467960-11746804 15 1.10e-03 CACTAAGACA GGAACTGG TGGCATTTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:34966192-34966272 1.9e-05 47_[+1]_25 chr8:142902167-142902247 1.9e-05 40_[+1]_32 chr11:33522567-33522647 1.9e-05 25_[+1]_47 chr17:72187084-72187164 1.9e-05 42_[+1]_30 chr9:137990390-137990470 1.9e-05 31_[+1]_41 chr9:136474571-136474651 1.9e-05 41_[+1]_31 chr11:129835293-12983537 1.9e-05 52_[+1]_20 chr7:131955444-131955524 1.9e-05 47_[+1]_25 chr19:10120207-10120287 1.9e-05 48_[+1]_24 chr6:90269379-90269459 1.9e-05 47_[+1]_25 chr7:63635501-63635581 1.9e-05 21_[+1]_51 chr15:68113420-68113500 1.9e-05 48_[+1]_24 chr22:39220673-39220753 1.9e-05 27_[+1]_45 chr1:18582955-18583035 1.9e-05 44_[+1]_28 chr22:48563212-48563292 1.9e-05 45_[+1]_27 chr22:37859099-37859179 1.9e-05 36_[+1]_36 chr2:219826674-219826754 1.9e-05 36_[+1]_36 chr16:25276093-25276173 1.9e-05 33_[+1]_39 chr20:61701345-61701425 1.9e-05 47_[+1]_25 chr4:158141513-158141593 1.9e-05 38_[+1]_34 chr4:8677243-8677323 1.9e-05 45_[+1]_27 chr2:215275811-215275891 1.9e-05 36_[+1]_36 chr12:113918047-11391812 1.9e-05 33_[+1]_39 chr1:110761519-110761599 1.9e-05 41_[+1]_31 chr8:55914031-55914111 1.9e-05 36_[+1]_36 chr20:17207370-17207450 1.9e-05 44_[+1]_28 chr5:52912930-52913010 1.9e-05 42_[+1]_30 chr22:45371586-45371666 1.9e-05 31_[+1]_41 chr2:98963102-98963182 1.9e-05 53_[+1]_19 chr11:116476408-11647648 1.9e-05 30_[+1]_42 chr14:77675187-77675267 1.9e-05 42_[+1]_30 chr7:135020679-135020759 1.9e-05 34_[+1]_38 chr12:113229322-11322940 1.9e-05 42_[+1]_30 chr20:43408953-43409033 1.9e-05 42_[+1]_30 chr15:89962758-89962838 1.9e-05 39_[+1]_33 chr8:35289931-35290011 1.9e-05 45_[+1]_27 chr8:67089840-67089920 1.9e-05 49_[+1]_23 chr5:16179027-16179107 1.9e-05 51_[+1]_21 chr12:119071040-11907112 1.9e-05 42_[+1]_30 chr1:37486424-37486504 1.9e-05 48_[+1]_24 chr8:28595105-28595185 1.9e-05 44_[+1]_28 chr18:55021279-55021359 1.9e-05 34_[+1]_38 chr20:37314656-37314736 1.9e-05 32_[+1]_40 chr2:131513839-131513919 1.9e-05 35_[+1]_37 chr9:34413386-34413466 1.9e-05 42_[+1]_30 chr1:1951123-1951203 1.9e-05 57_[+1]_15 chr15:74557541-74557621 1.9e-05 36_[+1]_36 chr2:242006562-242006642 1.9e-05 45_[+1]_27 chr2:27531441-27531521 1.9e-05 37_[+1]_35 chr6:12752097-12752177 1.9e-05 41_[+1]_31 chr14:97406506-97406586 1.9e-05 43_[+1]_29 chr2:29516856-29516936 1.9e-05 40_[+1]_32 chr14:100952983-10095306 1.9e-05 38_[+1]_34 chr13:79163516-79163596 1.9e-05 35_[+1]_37 chr9:134674724-134674804 1.9e-05 46_[+1]_26 chr11:122852632-12285271 1.9e-05 46_[+1]_26 chr22:37040441-37040521 1.9e-05 39_[+1]_33 chr12:108608423-10860850 1.9e-05 42_[+1]_30 chr11:72387976-72388056 1.9e-05 37_[+1]_35 chr16:12755732-12755812 1.9e-05 36_[+1]_36 chr9:140779157-140779237 1.9e-05 42_[+1]_30 chr5:167955685-167955765 1.9e-05 45_[+1]_27 chr5:14628625-14628705 1.9e-05 43_[+1]_29 chr11:116250303-11625038 1.9e-05 41_[+1]_31 chr20:44669685-44669765 1.9e-05 39_[+1]_33 chr3:139516734-139516814 1.9e-05 46_[+1]_26 chr2:101087523-101087603 1.9e-05 42_[+1]_30 chr9:140773201-140773281 1.9e-05 49_[+1]_23 chr20:57717398-57717478 3.8e-05 44_[+1]_28 chr22:50129123-50129203 3.8e-05 39_[+1]_33 chr19:38945849-38945929 3.8e-05 39_[+1]_33 chr5:141263099-141263179 3.8e-05 51_[+1]_21 chr12:119083184-11908326 3.8e-05 43_[+1]_29 chr8:40686491-40686571 3.8e-05 25_[+1]_47 chr1:210111107-210111187 3.8e-05 29_[+1]_43 chr10:16654405-16654485 3.8e-05 44_[+1]_28 chr7:154106944-154107024 3.8e-05 50_[+1]_22 chr10:79088310-79088390 3.8e-05 38_[+1]_34 chr19:34258928-34259008 3.8e-05 37_[+1]_35 chr12:131011526-13101160 3.8e-05 35_[+1]_37 chr7:140797368-140797448 3.8e-05 55_[+1]_17 chr22:46242999-46243079 5.7e-05 25_[+1]_47 chr5:176231092-176231172 5.7e-05 24_[+1]_48 chr16:70896066-70896146 5.7e-05 27_[+1]_45 chr5:175170825-175170905 6.9e-05 39_[+1]_33 chr6:116918137-116918217 6.9e-05 49_[+1]_23 chr1:30448091-30448171 6.9e-05 42_[+1]_30 chr10:85984583-85984663 6.9e-05 41_[+1]_31 chr19:5404212-5404292 6.9e-05 33_[+1]_39 chr1:210306106-210306186 6.9e-05 31_[+1]_41 chr16:17232850-17232930 6.9e-05 46_[+1]_26 chr2:133246843-133246923 0.00012 38_[+1]_34 chr5:92948380-92948460 0.00012 16_[+1]_56 chr17:10778787-10778867 0.00012 33_[+1]_39 chr22:42690535-42690615 0.00012 46_[+1]_26 chr12:58154322-58154402 0.00012 47_[+1]_25 chr12:108797877-10879795 0.00012 50_[+1]_22 chr17:45863220-45863300 0.00012 49_[+1]_23 chr16:26328551-26328631 0.00012 36_[+1]_36 chr8:62408858-62408938 0.00012 41_[+1]_31 chr20:61810310-61810390 0.00012 40_[+1]_32 chr12:100933142-10093322 0.00012 40_[+1]_32 chr9:124818943-124819023 0.00013 37_[+1]_35 chr16:23186111-23186191 0.00013 49_[+1]_23 chr6:105391834-105391914 0.00013 41_[+1]_31 chr16:9133229-9133309 0.00013 42_[+1]_30 chr17:74906137-74906217 0.00013 45_[+1]_27 chr15:70268880-70268960 0.00014 36_[+1]_36 chr19:54406483-54406563 0.00014 42_[+1]_30 chr1:11533847-11533927 0.00014 40_[+1]_32 chr1:50774668-50774748 0.00017 57_[+1]_15 chr8:24770306-24770386 0.00017 45_[+1]_27 chr19:39714492-39714572 0.00017 51_[+1]_21 chr12:67587649-67587729 0.00019 8_[+1]_64 chr2:119924803-119924883 0.00022 41_[+1]_31 chr21:43396172-43396252 0.00022 33_[+1]_39 chr1:165918737-165918817 0.00022 43_[+1]_29 chr3:11006422-11006502 0.00028 62_[+1]_10 chr7:152759145-152759225 0.00028 13_[+1]_59 chr2:73110635-73110715 0.00033 23_[+1]_49 chr11:17756618-17756698 0.00033 35_[+1]_37 chr2:171670833-171670913 0.00033 44_[+1]_28 chr7:77455790-77455870 0.00033 61_[+1]_11 chr12:132905875-13290595 0.00033 39_[+1]_33 chr11:1422974-1423054 0.00033 50_[+1]_22 chr12:103218386-10321846 0.00033 33_[+1]_39 chr9:140033689-140033769 0.00033 2_[+1]_70 chr11:119389638-11938971 0.00033 28_[+1]_44 chr17:64825802-64825882 0.00033 29_[+1]_43 chr5:170108324-170108404 0.00033 43_[+1]_29 chr9:104299380-104299460 0.00033 50_[+1]_22 chr20:40283683-40283763 0.00033 28_[+1]_44 chr15:91730640-91730720 0.00033 45_[+1]_27 chr8:99439141-99439221 0.00033 26_[+1]_46 chr4:170745027-170745107 0.00036 39_[+1]_33 chr20:56623321-56623401 0.00036 44_[+1]_28 chr1:58926307-58926387 0.00037 44_[+1]_28 chr8:10950087-10950167 0.00042 24_[+1]_48 chr19:55028834-55028914 0.00042 3_[+1]_69 chr9:19720534-19720614 0.00048 56_[+1]_16 chr10:102085080-10208516 0.00048 4_[+1]_68 chr16:25513017-25513097 0.00054 50_[+1]_22 chr3:131753947-131754027 0.00054 56_[+1]_16 chr3:51963611-51963691 0.00062 18_[+1]_54 chr2:44243571-44243651 0.00062 29_[+1]_43 chr5:123882502-123882582 0.00067 27_[+1]_45 chr10:73341937-73342017 0.00067 37_[+1]_35 chr15:77994990-77995070 0.00073 10_[+1]_62 chr2:226264846-226264926 0.00083 42_[+1]_30 chrX:48853508-48853588 0.00083 23_[+1]_49 chr1:37432023-37432103 0.00093 59_[+1]_13 chr9:34494105-34494185 0.00093 72_[+1] chr10:132722546-13272262 0.00098 59_[+1]_13 chr20:34973071-34973151 0.00098 57_[+1]_15 chr11:117467960-11746804 0.0011 14_[+1]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGTGCTGA width=8 seqs=155 chr1:34966192-34966272 ( 48) GGTGCTGA 1 chr8:142902167-142902247 ( 41) GGTGCTGA 1 chr11:33522567-33522647 ( 26) GGTGCTGA 1 chr17:72187084-72187164 ( 43) GGTGCTGA 1 chr9:137990390-137990470 ( 32) GGTGCTGA 1 chr9:136474571-136474651 ( 42) GGTGCTGA 1 chr11:129835293-12983537 ( 53) GGTGCTGA 1 chr7:131955444-131955524 ( 48) GGTGCTGA 1 chr19:10120207-10120287 ( 49) GGTGCTGA 1 chr6:90269379-90269459 ( 48) GGTGCTGA 1 chr7:63635501-63635581 ( 22) GGTGCTGA 1 chr15:68113420-68113500 ( 49) GGTGCTGA 1 chr22:39220673-39220753 ( 28) GGTGCTGA 1 chr1:18582955-18583035 ( 45) GGTGCTGA 1 chr22:48563212-48563292 ( 46) GGTGCTGA 1 chr22:37859099-37859179 ( 37) GGTGCTGA 1 chr2:219826674-219826754 ( 37) GGTGCTGA 1 chr16:25276093-25276173 ( 34) GGTGCTGA 1 chr20:61701345-61701425 ( 48) GGTGCTGA 1 chr4:158141513-158141593 ( 39) GGTGCTGA 1 chr4:8677243-8677323 ( 46) GGTGCTGA 1 chr2:215275811-215275891 ( 37) GGTGCTGA 1 chr12:113918047-11391812 ( 34) GGTGCTGA 1 chr1:110761519-110761599 ( 42) GGTGCTGA 1 chr8:55914031-55914111 ( 37) GGTGCTGA 1 chr20:17207370-17207450 ( 45) GGTGCTGA 1 chr5:52912930-52913010 ( 43) GGTGCTGA 1 chr22:45371586-45371666 ( 32) GGTGCTGA 1 chr2:98963102-98963182 ( 54) GGTGCTGA 1 chr11:116476408-11647648 ( 31) GGTGCTGA 1 chr14:77675187-77675267 ( 43) GGTGCTGA 1 chr7:135020679-135020759 ( 35) GGTGCTGA 1 chr12:113229322-11322940 ( 43) GGTGCTGA 1 chr20:43408953-43409033 ( 43) GGTGCTGA 1 chr15:89962758-89962838 ( 40) GGTGCTGA 1 chr8:35289931-35290011 ( 46) GGTGCTGA 1 chr8:67089840-67089920 ( 50) GGTGCTGA 1 chr5:16179027-16179107 ( 52) GGTGCTGA 1 chr12:119071040-11907112 ( 43) GGTGCTGA 1 chr1:37486424-37486504 ( 49) GGTGCTGA 1 chr8:28595105-28595185 ( 45) GGTGCTGA 1 chr18:55021279-55021359 ( 35) GGTGCTGA 1 chr20:37314656-37314736 ( 33) GGTGCTGA 1 chr2:131513839-131513919 ( 36) GGTGCTGA 1 chr9:34413386-34413466 ( 43) GGTGCTGA 1 chr1:1951123-1951203 ( 58) GGTGCTGA 1 chr15:74557541-74557621 ( 37) GGTGCTGA 1 chr2:242006562-242006642 ( 46) GGTGCTGA 1 chr2:27531441-27531521 ( 38) GGTGCTGA 1 chr6:12752097-12752177 ( 42) GGTGCTGA 1 chr14:97406506-97406586 ( 44) GGTGCTGA 1 chr2:29516856-29516936 ( 41) GGTGCTGA 1 chr14:100952983-10095306 ( 39) GGTGCTGA 1 chr13:79163516-79163596 ( 36) GGTGCTGA 1 chr9:134674724-134674804 ( 47) GGTGCTGA 1 chr11:122852632-12285271 ( 47) GGTGCTGA 1 chr22:37040441-37040521 ( 40) GGTGCTGA 1 chr12:108608423-10860850 ( 43) GGTGCTGA 1 chr11:72387976-72388056 ( 38) GGTGCTGA 1 chr16:12755732-12755812 ( 37) GGTGCTGA 1 chr9:140779157-140779237 ( 43) GGTGCTGA 1 chr5:167955685-167955765 ( 46) GGTGCTGA 1 chr5:14628625-14628705 ( 44) GGTGCTGA 1 chr11:116250303-11625038 ( 42) GGTGCTGA 1 chr20:44669685-44669765 ( 40) GGTGCTGA 1 chr3:139516734-139516814 ( 47) GGTGCTGA 1 chr2:101087523-101087603 ( 43) GGTGCTGA 1 chr9:140773201-140773281 ( 50) GGTGCTGA 1 chr20:57717398-57717478 ( 45) GGTCCTGA 1 chr22:50129123-50129203 ( 40) GGTCCTGA 1 chr19:38945849-38945929 ( 40) GGTCCTGA 1 chr5:141263099-141263179 ( 52) GGTCCTGA 1 chr12:119083184-11908326 ( 44) GGTCCTGA 1 chr8:40686491-40686571 ( 26) GGTCCTGA 1 chr1:210111107-210111187 ( 30) GGTCCTGA 1 chr10:16654405-16654485 ( 45) GGTCCTGA 1 chr7:154106944-154107024 ( 51) GGTCCTGA 1 chr10:79088310-79088390 ( 39) GGTCCTGA 1 chr19:34258928-34259008 ( 38) GGTCCTGA 1 chr12:131011526-13101160 ( 36) GGTCCTGA 1 chr7:140797368-140797448 ( 56) GGTCCTGA 1 chr22:46242999-46243079 ( 26) GGTGCTGT 1 chr5:176231092-176231172 ( 25) GGTGCTGT 1 chr16:70896066-70896146 ( 28) GGTGCTGT 1 chr5:175170825-175170905 ( 40) GGTACTGA 1 chr6:116918137-116918217 ( 50) GGTACTGA 1 chr1:30448091-30448171 ( 43) GGTACTGA 1 chr10:85984583-85984663 ( 42) GGTACTGA 1 chr19:5404212-5404292 ( 34) GGTACTGA 1 chr1:210306106-210306186 ( 32) GGTACTGA 1 chr16:17232850-17232930 ( 47) GGTACTGA 1 chr2:133246843-133246923 ( 39) GGTGCTGG 1 chr5:92948380-92948460 ( 17) GGTGCTGG 1 chr17:10778787-10778867 ( 34) GGTGCTGG 1 chr22:42690535-42690615 ( 47) GGTGCTGG 1 chr12:58154322-58154402 ( 48) GGTGCTGG 1 chr12:108797877-10879795 ( 51) GGTGCTGG 1 chr17:45863220-45863300 ( 50) GGTGCTGG 1 chr16:26328551-26328631 ( 37) GGTGCTGG 1 chr8:62408858-62408938 ( 42) GGTGCTGG 1 chr20:61810310-61810390 ( 41) GGTGCTGG 1 chr12:100933142-10093322 ( 41) GGTGCTGG 1 chr9:124818943-124819023 ( 38) AGTGCTGA 1 chr16:23186111-23186191 ( 50) AGTGCTGA 1 chr6:105391834-105391914 ( 42) AGTGCTGA 1 chr16:9133229-9133309 ( 43) AGTGCTGA 1 chr17:74906137-74906217 ( 46) AGTGCTGA 1 chr15:70268880-70268960 ( 37) GGTTCTGA 1 chr19:54406483-54406563 ( 43) GGTTCTGA 1 chr1:11533847-11533927 ( 41) GGTTCTGA 1 chr1:50774668-50774748 ( 58) GGTGCTGC 1 chr8:24770306-24770386 ( 46) GGTGCTGC 1 chr19:39714492-39714572 ( 52) GGTGCTGC 1 chr12:67587649-67587729 ( 9) GGTGGTGA 1 chr2:119924803-119924883 ( 42) GGTGCTAA 1 chr21:43396172-43396252 ( 34) GGTCCTGT 1 chr1:165918737-165918817 ( 44) GGTCCTGT 1 chr3:11006422-11006502 ( 63) GGTCCTGG 1 chr7:152759145-152759225 ( 14) GGACCTGA 1 chr2:73110635-73110715 ( 24) GGAGCTGT 1 chr11:17756618-17756698 ( 36) GGAGCTGT 1 chr2:171670833-171670913 ( 45) CGTGCTGA 1 chr7:77455790-77455870 ( 62) GGAGCTGT 1 chr12:132905875-13290595 ( 40) GGAGCTGT 1 chr11:1422974-1423054 ( 51) CGTGCTGA 1 chr12:103218386-10321846 ( 34) GGAGCTGT 1 chr9:140033689-140033769 ( 3) GGAGCTGT 1 chr11:119389638-11938971 ( 29) GGAGCTGT 1 chr17:64825802-64825882 ( 30) GGAGCTGT 1 chr5:170108324-170108404 ( 44) CGTGCTGA 1 chr9:104299380-104299460 ( 51) TGTGCTGA 1 chr20:40283683-40283763 ( 29) GGAGCTGT 1 chr15:91730640-91730720 ( 46) TGTGCTGA 1 chr8:99439141-99439221 ( 27) GGAGCTGT 1 chr4:170745027-170745107 ( 40) GGTACTGG 1 chr20:56623321-56623401 ( 45) GGTACTGG 1 chr1:58926307-58926387 ( 45) AGTCCTGA 1 chr8:10950087-10950167 ( 25) GGAGCTGG 1 chr19:55028834-55028914 ( 4) AGTACTGA 1 chr9:19720534-19720614 ( 57) GGTGCTTA 1 chr10:102085080-10208516 ( 5) AGAGCTGA 1 chr16:25513017-25513097 ( 51) GGTCCTGC 1 chr3:131753947-131754027 ( 57) GGTCCTGC 1 chr3:51963611-51963691 ( 19) GGTGGTGT 1 chr2:44243571-44243651 ( 30) GGTGGTGT 1 chr5:123882502-123882582 ( 28) GGTGCTAT 1 chr10:73341937-73342017 ( 38) GGTAGTGA 1 chr15:77994990-77995070 ( 11) GGTGGTGG 1 chr2:226264846-226264926 ( 43) GGTGCTAG 1 chrX:48853508-48853588 ( 24) GGACCTGT 1 chr1:37432023-37432103 ( 60) GGTTCTGC 1 chr9:34494105-34494185 ( 73) GGTTCTGC 1 chr10:132722546-13272262 ( 60) GGACCTGG 1 chr20:34973071-34973151 ( 58) GGACCTGG 1 chr11:117467960-11746804 ( 15) GGAACTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.78803 E= 3.7e-167 -195 -397 162 -396 -1392 -1392 175 -1392 -86 -1392 -1392 215 -136 -103 132 -263 -1392 167 -320 -1392 -1392 -1392 -1392 232 -336 -1392 171 -495 182 -275 -120 -71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 155 E= 3.7e-167 0.051613 0.019355 0.916129 0.012903 0.000000 0.000000 1.000000 0.000000 0.109677 0.000000 0.000000 0.890323 0.077419 0.148387 0.741935 0.032258 0.000000 0.967742 0.032258 0.000000 0.000000 0.000000 0.000000 1.000000 0.019355 0.000000 0.974194 0.006452 0.703226 0.045161 0.129032 0.122581 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGTGCTGA MEME-1 regular expression -------------------------------------------------------------------------------- GGTGCTGA -------------------------------------------------------------------------------- Time 4.92 secs. ******************************************************************************** ******************************************************************************** MOTIF TCAGCACC MEME-2 width = 8 sites = 117 llr = 1049 E-value = 1.8e-142 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::a:1a:: pos.-specific C 1a::7:a9 probability G 1::a2::: matrix T 8::::::1 bits 2.3 * * 2.1 * * 1.9 ** * 1.6 *** ** Relative 1.4 **** *** Entropy 1.2 **** *** (12.9 bits) 0.9 **** *** 0.7 **** *** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCAGCACC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:3307486-3307566 18 1.98e-05 AATGGGAGCT TCAGCACC GGGGGTCGCG chr2:166094963-166095043 32 1.98e-05 AAATTGGTTC TCAGCACC ATGGACAGCG chr10:71327751-71327831 22 1.98e-05 CGTGGTCATT TCAGCACC ATGGTCAGGG chr19:51198549-51198629 29 1.98e-05 ggcgccggct tcagcacc gcggacagct chr8:56015523-56015603 37 1.98e-05 GTGCACGATT TCAGCACC GAGGACAGCG chr11:17756618-17756698 48 1.98e-05 AGCTGTCCCT TCAGCACC GCCGCGGGAG chr20:31797699-31797779 26 1.98e-05 GGAATAGATT TCAGCACC ACGGACAGCA chr2:11810052-11810132 29 1.98e-05 gcccgcgccT TCAGCACC ACGTGCGCGG chr3:11006422-11006502 34 1.98e-05 CAATGTAGTA TCAGCACC TTGGACAGCT chr7:32467444-32467524 44 1.98e-05 GCCTCACGCT TCAGCACC GGGGACAGCT chr2:36655028-36655108 20 1.98e-05 GGGTAGCCTA TCAGCACC TGGCTGGTGG chr5:123882502-123882582 2 1.98e-05 G TCAGCACC ATGTGAGAAA chr8:50824223-50824303 33 1.98e-05 TCCCCTTACT TCAGCACC AGAGGGGATG chr9:139093728-139093808 30 1.98e-05 CAGCGCGGAT TCAGCACC GCGGACCGGA chr12:132905875-13290595 52 1.98e-05 AGCTGTCCCT TCAGCACC AGCTCAGCGC chr1:37432023-37432103 35 1.98e-05 GGCTGGGAGG TCAGCACC AGGGACAGCT chr8:142577198-142577278 35 1.98e-05 GCTCTGTCAA TCAGCACC ATGGACAGCA chr5:13867077-13867157 27 1.98e-05 tactgtgtag tcagcacc aaggacagcg chr19:7676572-7676652 27 1.98e-05 GCTGTGTCAT TCAGCACC CCCTTTGGCC chr12:53135314-53135394 31 1.98e-05 GGGCCAGATT TCAGCACC AAGGACAGAG chr7:37092428-37092508 28 1.98e-05 CAGCCTCCGT TCAGCACC AAGGAGAGCA chr12:119950850-11995093 24 1.98e-05 CTGTGATGTT TCAGCACC GTGGACAGCT chr22:50309379-50309459 20 1.98e-05 cagcgcagcc tcagcacc aaggacagag chr20:61713793-61713873 16 1.98e-05 TCTCTGGGCT TCAGCACC AGGGAGGCGG chr7:8482568-8482648 37 1.98e-05 GAGCGACTCT TCAGCACC ACGGCCAGCG chr7:104192710-104192790 34 1.98e-05 TTTAGACGTG TCAGCACC ATGGACAGCT chr9:140033689-140033769 24 1.98e-05 CGGCCCCGCT TCAGCACC GCGGACAGCG chr14:58332221-58332301 33 1.98e-05 CTCTCACGGT TCAGCACC GAGGACAGCG chrX:48853508-48853588 33 1.98e-05 AGGACCTGTT TCAGCACC ACGGACAGTG chr20:43405795-43405875 29 1.98e-05 TTACTTCCAT TCAGCACC AGGGATAGCG chr9:34494105-34494185 32 1.98e-05 GGGCTGGTTT TCAGCACC TCGGAGAGTT chr2:73507188-73507268 30 1.98e-05 tgttatatac tcagcacc ctggatagcg chr17:33124872-33124952 24 1.98e-05 GCTCTCCTGA TCAGCACC TAGGACAGCT chr18:5197154-5197234 25 1.98e-05 ggcggggcgg TCAGCACC CCGGACAGCT chr5:63259080-63259160 17 1.98e-05 GAAACTGGGT TCAGCACC TGGGACAGTT chr1:7135550-7135630 22 1.98e-05 CAGCGTTGGT TCAGCACC AAGGACAGCA chr14:74892726-74892806 39 1.98e-05 AGCCGCCGCT TCAGCACC GCGGACAGCT chr15:77994990-77995070 25 1.98e-05 GTGGTTTGGT TCAGCACC CCGGACAGCT chr11:10400716-10400796 21 1.98e-05 CAGGAAATTG TCAGCACC TCCCTAGTGG chr12:65220257-65220337 26 1.98e-05 GCTCCTCCAT TCAGCACC TCGCGTCCGG chr10:132722546-13272262 23 1.98e-05 AAGTTCTGCG TCAGCACC ATGGACAGCA chr1:18246084-18246164 34 1.98e-05 TTGAGAGGAG TCAGCACC AGGGACAGCT chr14:78996554-78996634 36 1.98e-05 TTGGAGATTT TCAGCACC GTGGACAGAG chr5:174749086-174749166 31 1.98e-05 TGTGTCTGTT TCAGCACC AAGGACAGTT chr19:13574280-13574360 35 1.98e-05 CGGGATGTTT TCAGCACC ACGGCCAGCG chr16:83735300-83735380 37 1.98e-05 AGCACCACGG TCAGCACC CACCAATTGC chr1:183386046-183386126 19 1.98e-05 GCCCTGCATT TCAGCACC GCCGCCTCTG chr16:25758639-25758719 21 1.98e-05 TGGCTTGTCT TCAGCACC GTTGGCCGTG chr20:859545-859625 29 1.98e-05 GAACAAGAAT TCAGCACC AAGGACAGGG chr12:3601510-3601590 32 1.98e-05 GCGGCCACCT TCAGCACC AGGGACAGCG chr15:73639213-73639293 32 1.98e-05 GATATGACGT TCAGCACC ACGGACAGCG chr11:113862026-11386210 44 1.98e-05 GATGAGAGCT TCAGCACC ACGGCCAGCA chr22:43845278-43845358 21 1.98e-05 cgccatatct tcagcacc acggacagtg chr16:8076611-8076691 22 1.98e-05 TCTCCTGGTT TCAGCACC GTGGGTTTGG chr5:141114558-141114638 40 1.98e-05 AGGACCTTGG TCAGCACC CCTGGGTTCC chr10:102440641-10244072 31 1.98e-05 CCGTGCGCGT TCAGCACC CTGGACAGAG chr16:9025866-9025946 23 1.98e-05 GCAATCTGAT TCAGCACC ACGGACAGTG chr8:142970840-142970920 33 1.98e-05 agtcactgtt tcagcacc agggacagca chr19:55028834-55028914 39 1.98e-05 GTCTGTAGTT TCAGCACC ATGGCCAGCG chr2:44243571-44243651 39 1.98e-05 TGGTGGTGTG TCAGCACC ATGGACAGCG chr13:28366588-28366668 27 1.98e-05 CCGGCGCCTT TCAGCACC ACTAGCGCTG chr8:99439141-99439221 39 1.98e-05 AGCTGTCCGT TCAGCACC Accgcgccgc chr3:123936527-123936607 35 3.93e-05 TCACACTAGT TCAGGACC AAGGACAGCG chr12:67587649-67587729 23 3.93e-05 GTGAATGGGG TCAGGACC CTGGACAGCT chr18:75269147-75269227 20 3.93e-05 CAACTGAGGT TCAGGACC ACGGCTAGCA chr2:59061690-59061770 37 3.93e-05 AACAGGACGA TCAGGACC GTGGACAGCG chr11:117467960-11746804 30 3.93e-05 TGGTGGCATT TCAGGACC GGGGACAGCG chr6:159688358-159688438 35 3.93e-05 CAGCCATGGC TCAGGACC ATGGACAGCG chr14:93380561-93380641 28 3.93e-05 AGGTGGTAGT TCAGGACC ACGGACAGCA chr20:62092876-62092956 28 3.93e-05 CAGCTCCTGG TCAGGACC ATGGCCAGCA chr6:30279007-30279087 22 3.93e-05 AAACACATCT TCAGGACC TTGGACAGCA chr5:133877561-133877641 27 3.93e-05 TGACCAGGAG TCAGGACC CTGGACAGGG chr1:202626514-202626594 26 3.93e-05 GGAGGTGGGG TCAGGACC CTGGACAGAA chrX:18165263-18165343 41 3.93e-05 CAGCAGTTAT TCAGGACC CTGGAGAGCT chr1:94236356-94236436 19 3.93e-05 AAATTGTATT TCAGGACC ACAGACAGCA chr19:34175264-34175344 28 3.93e-05 TCTGGGGATT TCAGGACC CAGGCCAGCG chr16:13130612-13130692 26 3.93e-05 AAAAGGCAAT TCAGGACC ACGGACAGCA chr3:10795819-10795899 29 3.93e-05 CCAGGACCCG TCAGGACC CTGGAGAGCT chr4:170745027-170745107 57 5.23e-05 GCCTCTTCCA TCAGCACT TGCTGACCGG chr3:51963611-51963691 27 5.23e-05 AAGGTGGTGT TCAGCACT GGGAACTGGA chr7:152759145-152759225 24 5.23e-05 ggacctgatt tcagcact gctacgtgga chr5:6328413-6328493 19 5.23e-05 TCAACCAACT TCAGCACT GCAGTGTCGG chr3:42341626-42341706 31 5.23e-05 CTGTCTAGTT TCAGCACT GCAGTGGAGG chr11:134897528-13489760 35 5.23e-05 AGAGCCGTTT TCAGCACT GGACAGCGAC chr20:41816551-41816631 46 5.23e-05 CGGGCGGCGT TCAGCACT GGACAGCTTC chr19:36466679-36466759 33 6.54e-05 ACAACAACGA TCAGAACC ATGGACAGCA chr1:50774668-50774748 36 6.54e-05 AGAGGCTGTT TCAGAACC ATGGATAGCT chr13:93970948-93971028 23 6.54e-05 AAATCATGAT TCAGAACC TGGGAGAGGA chr20:61747924-61748004 37 6.54e-05 GAGATGCCGT TCAGAACC TCGGACAGCG chr20:34973071-34973151 34 6.54e-05 GGTTGGGATT TCAGAACC TTGGACAGCT chr19:39714492-39714572 27 6.54e-05 ACAGTGGAGT TCAGAACC ACGGAGAGCA chr4:147565141-147565221 30 7.85e-05 AGTACTAATT TCAGTACC ATGGATAGTA chr2:207507534-207507614 29 7.85e-05 AACGCCAACT TCAGTACC TTGGACAGAG chr6:154360632-154360712 40 7.85e-05 CGCCCGGCCG TCAGTACC ATGGACAGCA chr11:1422974-1423054 40 1.08e-04 AGGGAGCTGT CCAGCACC AGCCGTGCTG chr5:139188309-139188389 30 1.08e-04 CACCGCCCAC CCAGCACC CTGGACAGCG chr16:750750-750830 35 1.08e-04 gccacccgcg ccAGCACC ATGGACAGCG chr5:132901835-132901915 26 1.08e-04 CCCTAGGGAT CCAGCACC ATGGACAGCA chr2:133246843-133246923 58 1.58e-04 CTTGGTGCCG GCAGCACC GAGGGCAGGG chr12:113503168-11350324 53 1.58e-04 AGTACCTTGG ACAGCACC ATCAACGACC chr3:38439019-38439099 51 1.58e-04 AGGACCCTGG ACAGCACC ATGGAGCCCT chr21:43396172-43396252 68 1.58e-04 GCCAGTGTGG GCAGCACC TGCCA chr11:133817321-13381740 23 1.58e-04 ACTCTCCAGG GCAGCACC TAGGACAGCA chr8:69084597-69084677 35 1.58e-04 AGTACCAAGG ACAGCACC TCGTGCCCGA chr9:140779157-140779237 12 1.58e-04 GGTAGAGGTG GCAGCACC CGGCCTCATG chr19:15649750-15649830 29 1.70e-04 caaGCCCACT TCAGGACT GAGGACAGCT chr8:26372685-26372765 29 2.09e-04 AGCTCCGAGG CCAGGACC ATGGTCAGCG chr10:102085080-10208516 31 2.09e-04 CGGGGTGAGG CCAGGACC TTGGAGAGCA chr12:95273502-95273582 31 2.30e-04 GAGCGCTATT TTAGCACC ATGGACAGCT chr16:68478116-68478196 25 2.98e-04 GTGGGTGAGG CCAGCACT CCAGAACCTT chr10:72075756-72075836 35 2.98e-04 AGGCGGCTCT CCAGCACT CTGGACAGAG chr17:29721748-29721828 39 2.98e-04 acattgcagg gcaggacc atggacaggg chr5:52912930-52913010 72 3.38e-04 ATATTTGAGT TCTGCACC T chr10:85984583-85984663 73 3.38e-04 CCCTCCAGTC TCAGCTCC chr1:93521938-93522018 30 4.10e-04 GAGAGGCAAT CCAGTACC CTGGAGAGCT chr7:131955444-131955524 59 4.42e-04 GTGCTGAAAT ACAGAACC AAAGAATTTT chr7:105054636-105054716 39 4.75e-04 CCCCTCACTT GCAGTACC TTGGACAGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:3307486-3307566 2e-05 17_[+2]_55 chr2:166094963-166095043 2e-05 31_[+2]_41 chr10:71327751-71327831 2e-05 21_[+2]_51 chr19:51198549-51198629 2e-05 28_[+2]_44 chr8:56015523-56015603 2e-05 36_[+2]_36 chr11:17756618-17756698 2e-05 47_[+2]_25 chr20:31797699-31797779 2e-05 25_[+2]_47 chr2:11810052-11810132 2e-05 28_[+2]_44 chr3:11006422-11006502 2e-05 33_[+2]_39 chr7:32467444-32467524 2e-05 43_[+2]_29 chr2:36655028-36655108 2e-05 19_[+2]_53 chr5:123882502-123882582 2e-05 1_[+2]_71 chr8:50824223-50824303 2e-05 32_[+2]_40 chr9:139093728-139093808 2e-05 29_[+2]_43 chr12:132905875-13290595 2e-05 51_[+2]_21 chr1:37432023-37432103 2e-05 34_[+2]_38 chr8:142577198-142577278 2e-05 34_[+2]_38 chr5:13867077-13867157 2e-05 26_[+2]_46 chr19:7676572-7676652 2e-05 26_[+2]_46 chr12:53135314-53135394 2e-05 30_[+2]_42 chr7:37092428-37092508 2e-05 27_[+2]_45 chr12:119950850-11995093 2e-05 23_[+2]_49 chr22:50309379-50309459 2e-05 19_[+2]_53 chr20:61713793-61713873 2e-05 15_[+2]_57 chr7:8482568-8482648 2e-05 36_[+2]_36 chr7:104192710-104192790 2e-05 33_[+2]_39 chr9:140033689-140033769 2e-05 23_[+2]_49 chr14:58332221-58332301 2e-05 32_[+2]_40 chrX:48853508-48853588 2e-05 32_[+2]_40 chr20:43405795-43405875 2e-05 28_[+2]_44 chr9:34494105-34494185 2e-05 31_[+2]_41 chr2:73507188-73507268 2e-05 29_[+2]_43 chr17:33124872-33124952 2e-05 23_[+2]_49 chr18:5197154-5197234 2e-05 24_[+2]_48 chr5:63259080-63259160 2e-05 16_[+2]_56 chr1:7135550-7135630 2e-05 21_[+2]_51 chr14:74892726-74892806 2e-05 38_[+2]_34 chr15:77994990-77995070 2e-05 24_[+2]_48 chr11:10400716-10400796 2e-05 20_[+2]_52 chr12:65220257-65220337 2e-05 25_[+2]_47 chr10:132722546-13272262 2e-05 22_[+2]_50 chr1:18246084-18246164 2e-05 33_[+2]_39 chr14:78996554-78996634 2e-05 35_[+2]_37 chr5:174749086-174749166 2e-05 30_[+2]_42 chr19:13574280-13574360 2e-05 34_[+2]_38 chr16:83735300-83735380 2e-05 36_[+2]_36 chr1:183386046-183386126 2e-05 18_[+2]_54 chr16:25758639-25758719 2e-05 20_[+2]_52 chr20:859545-859625 2e-05 28_[+2]_44 chr12:3601510-3601590 2e-05 31_[+2]_41 chr15:73639213-73639293 2e-05 31_[+2]_41 chr11:113862026-11386210 2e-05 43_[+2]_29 chr22:43845278-43845358 2e-05 20_[+2]_52 chr16:8076611-8076691 2e-05 21_[+2]_51 chr5:141114558-141114638 2e-05 39_[+2]_33 chr10:102440641-10244072 2e-05 30_[+2]_42 chr16:9025866-9025946 2e-05 22_[+2]_50 chr8:142970840-142970920 2e-05 32_[+2]_40 chr19:55028834-55028914 2e-05 38_[+2]_34 chr2:44243571-44243651 2e-05 38_[+2]_34 chr13:28366588-28366668 2e-05 26_[+2]_46 chr8:99439141-99439221 2e-05 38_[+2]_34 chr3:123936527-123936607 3.9e-05 34_[+2]_38 chr12:67587649-67587729 3.9e-05 22_[+2]_50 chr18:75269147-75269227 3.9e-05 19_[+2]_53 chr2:59061690-59061770 3.9e-05 36_[+2]_36 chr11:117467960-11746804 3.9e-05 29_[+2]_43 chr6:159688358-159688438 3.9e-05 34_[+2]_38 chr14:93380561-93380641 3.9e-05 27_[+2]_45 chr20:62092876-62092956 3.9e-05 27_[+2]_45 chr6:30279007-30279087 3.9e-05 21_[+2]_51 chr5:133877561-133877641 3.9e-05 26_[+2]_46 chr1:202626514-202626594 3.9e-05 25_[+2]_47 chrX:18165263-18165343 3.9e-05 40_[+2]_32 chr1:94236356-94236436 3.9e-05 18_[+2]_54 chr19:34175264-34175344 3.9e-05 27_[+2]_45 chr16:13130612-13130692 3.9e-05 25_[+2]_47 chr3:10795819-10795899 3.9e-05 28_[+2]_44 chr4:170745027-170745107 5.2e-05 56_[+2]_16 chr3:51963611-51963691 5.2e-05 26_[+2]_46 chr7:152759145-152759225 5.2e-05 23_[+2]_49 chr5:6328413-6328493 5.2e-05 18_[+2]_54 chr3:42341626-42341706 5.2e-05 30_[+2]_42 chr11:134897528-13489760 5.2e-05 34_[+2]_38 chr20:41816551-41816631 5.2e-05 45_[+2]_27 chr19:36466679-36466759 6.5e-05 32_[+2]_40 chr1:50774668-50774748 6.5e-05 35_[+2]_37 chr13:93970948-93971028 6.5e-05 22_[+2]_50 chr20:61747924-61748004 6.5e-05 36_[+2]_36 chr20:34973071-34973151 6.5e-05 33_[+2]_39 chr19:39714492-39714572 6.5e-05 26_[+2]_46 chr4:147565141-147565221 7.8e-05 29_[+2]_43 chr2:207507534-207507614 7.8e-05 28_[+2]_44 chr6:154360632-154360712 7.8e-05 39_[+2]_33 chr11:1422974-1423054 0.00011 39_[+2]_33 chr5:139188309-139188389 0.00011 29_[+2]_43 chr16:750750-750830 0.00011 34_[+2]_38 chr5:132901835-132901915 0.00011 25_[+2]_47 chr2:133246843-133246923 0.00016 57_[+2]_15 chr12:113503168-11350324 0.00016 52_[+2]_20 chr3:38439019-38439099 0.00016 50_[+2]_22 chr21:43396172-43396252 0.00016 67_[+2]_5 chr11:133817321-13381740 0.00016 22_[+2]_50 chr8:69084597-69084677 0.00016 34_[+2]_38 chr9:140779157-140779237 0.00016 11_[+2]_61 chr19:15649750-15649830 0.00017 28_[+2]_44 chr8:26372685-26372765 0.00021 28_[+2]_44 chr10:102085080-10208516 0.00021 30_[+2]_42 chr12:95273502-95273582 0.00023 30_[+2]_42 chr16:68478116-68478196 0.0003 24_[+2]_48 chr10:72075756-72075836 0.0003 34_[+2]_38 chr17:29721748-29721828 0.0003 38_[+2]_34 chr5:52912930-52913010 0.00034 71_[+2]_1 chr10:85984583-85984663 0.00034 72_[+2] chr1:93521938-93522018 0.00041 29_[+2]_43 chr7:131955444-131955524 0.00044 58_[+2]_14 chr7:105054636-105054716 0.00047 38_[+2]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCAGCACC width=8 seqs=117 chr19:3307486-3307566 ( 18) TCAGCACC 1 chr2:166094963-166095043 ( 32) TCAGCACC 1 chr10:71327751-71327831 ( 22) TCAGCACC 1 chr19:51198549-51198629 ( 29) TCAGCACC 1 chr8:56015523-56015603 ( 37) TCAGCACC 1 chr11:17756618-17756698 ( 48) TCAGCACC 1 chr20:31797699-31797779 ( 26) TCAGCACC 1 chr2:11810052-11810132 ( 29) TCAGCACC 1 chr3:11006422-11006502 ( 34) TCAGCACC 1 chr7:32467444-32467524 ( 44) TCAGCACC 1 chr2:36655028-36655108 ( 20) TCAGCACC 1 chr5:123882502-123882582 ( 2) TCAGCACC 1 chr8:50824223-50824303 ( 33) TCAGCACC 1 chr9:139093728-139093808 ( 30) TCAGCACC 1 chr12:132905875-13290595 ( 52) TCAGCACC 1 chr1:37432023-37432103 ( 35) TCAGCACC 1 chr8:142577198-142577278 ( 35) TCAGCACC 1 chr5:13867077-13867157 ( 27) TCAGCACC 1 chr19:7676572-7676652 ( 27) TCAGCACC 1 chr12:53135314-53135394 ( 31) TCAGCACC 1 chr7:37092428-37092508 ( 28) TCAGCACC 1 chr12:119950850-11995093 ( 24) TCAGCACC 1 chr22:50309379-50309459 ( 20) TCAGCACC 1 chr20:61713793-61713873 ( 16) TCAGCACC 1 chr7:8482568-8482648 ( 37) TCAGCACC 1 chr7:104192710-104192790 ( 34) TCAGCACC 1 chr9:140033689-140033769 ( 24) TCAGCACC 1 chr14:58332221-58332301 ( 33) TCAGCACC 1 chrX:48853508-48853588 ( 33) TCAGCACC 1 chr20:43405795-43405875 ( 29) TCAGCACC 1 chr9:34494105-34494185 ( 32) TCAGCACC 1 chr2:73507188-73507268 ( 30) TCAGCACC 1 chr17:33124872-33124952 ( 24) TCAGCACC 1 chr18:5197154-5197234 ( 25) TCAGCACC 1 chr5:63259080-63259160 ( 17) TCAGCACC 1 chr1:7135550-7135630 ( 22) TCAGCACC 1 chr14:74892726-74892806 ( 39) TCAGCACC 1 chr15:77994990-77995070 ( 25) TCAGCACC 1 chr11:10400716-10400796 ( 21) TCAGCACC 1 chr12:65220257-65220337 ( 26) TCAGCACC 1 chr10:132722546-13272262 ( 23) TCAGCACC 1 chr1:18246084-18246164 ( 34) TCAGCACC 1 chr14:78996554-78996634 ( 36) TCAGCACC 1 chr5:174749086-174749166 ( 31) TCAGCACC 1 chr19:13574280-13574360 ( 35) TCAGCACC 1 chr16:83735300-83735380 ( 37) TCAGCACC 1 chr1:183386046-183386126 ( 19) TCAGCACC 1 chr16:25758639-25758719 ( 21) TCAGCACC 1 chr20:859545-859625 ( 29) TCAGCACC 1 chr12:3601510-3601590 ( 32) TCAGCACC 1 chr15:73639213-73639293 ( 32) TCAGCACC 1 chr11:113862026-11386210 ( 44) TCAGCACC 1 chr22:43845278-43845358 ( 21) TCAGCACC 1 chr16:8076611-8076691 ( 22) TCAGCACC 1 chr5:141114558-141114638 ( 40) TCAGCACC 1 chr10:102440641-10244072 ( 31) TCAGCACC 1 chr16:9025866-9025946 ( 23) TCAGCACC 1 chr8:142970840-142970920 ( 33) TCAGCACC 1 chr19:55028834-55028914 ( 39) TCAGCACC 1 chr2:44243571-44243651 ( 39) TCAGCACC 1 chr13:28366588-28366668 ( 27) TCAGCACC 1 chr8:99439141-99439221 ( 39) TCAGCACC 1 chr3:123936527-123936607 ( 35) TCAGGACC 1 chr12:67587649-67587729 ( 23) TCAGGACC 1 chr18:75269147-75269227 ( 20) TCAGGACC 1 chr2:59061690-59061770 ( 37) TCAGGACC 1 chr11:117467960-11746804 ( 30) TCAGGACC 1 chr6:159688358-159688438 ( 35) TCAGGACC 1 chr14:93380561-93380641 ( 28) TCAGGACC 1 chr20:62092876-62092956 ( 28) TCAGGACC 1 chr6:30279007-30279087 ( 22) TCAGGACC 1 chr5:133877561-133877641 ( 27) TCAGGACC 1 chr1:202626514-202626594 ( 26) TCAGGACC 1 chrX:18165263-18165343 ( 41) TCAGGACC 1 chr1:94236356-94236436 ( 19) TCAGGACC 1 chr19:34175264-34175344 ( 28) TCAGGACC 1 chr16:13130612-13130692 ( 26) TCAGGACC 1 chr3:10795819-10795899 ( 29) TCAGGACC 1 chr4:170745027-170745107 ( 57) TCAGCACT 1 chr3:51963611-51963691 ( 27) TCAGCACT 1 chr7:152759145-152759225 ( 24) TCAGCACT 1 chr5:6328413-6328493 ( 19) TCAGCACT 1 chr3:42341626-42341706 ( 31) TCAGCACT 1 chr11:134897528-13489760 ( 35) TCAGCACT 1 chr20:41816551-41816631 ( 46) TCAGCACT 1 chr19:36466679-36466759 ( 33) TCAGAACC 1 chr1:50774668-50774748 ( 36) TCAGAACC 1 chr13:93970948-93971028 ( 23) TCAGAACC 1 chr20:61747924-61748004 ( 37) TCAGAACC 1 chr20:34973071-34973151 ( 34) TCAGAACC 1 chr19:39714492-39714572 ( 27) TCAGAACC 1 chr4:147565141-147565221 ( 30) TCAGTACC 1 chr2:207507534-207507614 ( 29) TCAGTACC 1 chr6:154360632-154360712 ( 40) TCAGTACC 1 chr11:1422974-1423054 ( 40) CCAGCACC 1 chr5:139188309-139188389 ( 30) CCAGCACC 1 chr16:750750-750830 ( 35) CCAGCACC 1 chr5:132901835-132901915 ( 26) CCAGCACC 1 chr2:133246843-133246923 ( 58) GCAGCACC 1 chr12:113503168-11350324 ( 53) ACAGCACC 1 chr3:38439019-38439099 ( 51) ACAGCACC 1 chr21:43396172-43396252 ( 68) GCAGCACC 1 chr11:133817321-13381740 ( 23) GCAGCACC 1 chr8:69084597-69084677 ( 35) ACAGCACC 1 chr9:140779157-140779237 ( 12) GCAGCACC 1 chr19:15649750-15649830 ( 29) TCAGGACT 1 chr8:26372685-26372765 ( 29) CCAGGACC 1 chr10:102085080-10208516 ( 31) CCAGGACC 1 chr12:95273502-95273582 ( 31) TTAGCACC 1 chr16:68478116-68478196 ( 25) CCAGCACT 1 chr10:72075756-72075836 ( 35) CCAGCACT 1 chr17:29721748-29721828 ( 39) GCAGGACC 1 chr5:52912930-52913010 ( 72) TCTGCACC 1 chr10:85984583-85984663 ( 73) TCAGCTCC 1 chr1:93521938-93522018 ( 30) CCAGTACC 1 chr7:131955444-131955524 ( 59) ACAGAACC 1 chr7:105054636-105054716 ( 39) GCAGTACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.9286 E= 1.8e-142 -254 -198 -253 206 -1351 171 -1351 -455 231 -1351 -1351 -455 -1351 -1351 175 -1351 -174 126 -80 -223 231 -1351 -1351 -455 -1351 172 -1351 -1351 -1351 159 -1351 -123 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 117 E= 1.8e-142 0.034188 0.076923 0.051282 0.837607 0.000000 0.991453 0.000000 0.008547 0.991453 0.000000 0.000000 0.008547 0.000000 0.000000 1.000000 0.000000 0.059829 0.726496 0.170940 0.042735 0.991453 0.000000 0.000000 0.008547 0.000000 1.000000 0.000000 0.000000 0.000000 0.914530 0.000000 0.085470 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCAGCACC MEME-2 regular expression -------------------------------------------------------------------------------- TCAGCACC -------------------------------------------------------------------------------- Time 8.35 secs. ******************************************************************************** ******************************************************************************** MOTIF GCTGTCCA MEME-3 width = 8 sites = 129 llr = 1049 E-value = 1.5e-119 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1::::::6 pos.-specific C 1a:1:aa1 probability G 8::8:::3 matrix T 1:a:a::1 bits 2.3 * 2.1 * * 1.9 * * 1.6 ** *** Relative 1.4 ** *** Entropy 1.2 ** *** (11.7 bits) 0.9 ****** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GCTGTCCA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:34966192-34966272 39 1.95e-05 CCTCTGGGTA GCTGTCCA CGGTGCTGAC chr9:19720534-19720614 48 1.95e-05 GAAAGCTGTA GCTGTCCA TGGTGCTTAA chr11:129835293-12983537 38 1.95e-05 CCATGTTACT GCTGTCCA GCTGGCAGGT chr5:92948380-92948460 8 1.95e-05 GCTGGGC GCTGTCCA TGGTGCTGGG chr6:90269379-90269459 33 1.95e-05 TGGCCGTGGT GCTGTCCA ATGCTCTGGT chr20:56623321-56623401 36 1.95e-05 ATTTCTGGCT GCTGTCCA TGGTACTGGC chr15:79087541-79087621 33 1.95e-05 GCTGGGCCCT GCTGTCCA GCAATAGCCC chr6:116918137-116918217 41 1.95e-05 CATGAGTGCT GCTGTCCA CGGTACTGAA chr10:73341937-73342017 29 1.95e-05 ctctggagcc GCTGTCCa tggtagtgac chr1:110761519-110761599 33 1.95e-05 ATGGGAGCCT GCTGTCCA GGGTGCTGAG chr22:42690535-42690615 38 1.95e-05 CCAGGCTGTT GCTGTCCA GGGTGCTGGG chr5:52912930-52913010 28 1.95e-05 TGGCTGAGGT GCTGTCCA CCAGTTTGGT chr5:141263099-141263179 36 1.95e-05 GGGACCGGGA GCTGTCCA GCGCCTCGGG chr12:58154322-58154402 39 1.95e-05 GGTCTTGGTT GCTGTCCA TGGTGCTGGC chr10:85984583-85984663 33 1.95e-05 GGCACGGAAC GCTGTCCA TGGTACTGAG chr14:77675187-77675267 34 1.95e-05 CCAGCATGGT GCTGTCCA TGGTGCTGAG chr19:54406483-54406563 34 1.95e-05 CTCGAATAGC GCTGTCCA TGGTTCTGAA chr8:35289931-35290011 37 1.95e-05 GGCTTGAGGT GCTGTCCA GGGTGCTGAA chr17:45863220-45863300 41 1.95e-05 AGCGCTTTCC GCTGTCCA TGGTGCTGGA chr8:28595105-28595185 36 1.95e-05 ACTCCTGTGA GCTGTCCA TGGTGCTGAC chr9:104299380-104299460 36 1.95e-05 TGTAAATGGA GCTGTCCA CCACAGCTGT chr2:242006562-242006642 30 1.95e-05 GGAAGGGACC GCTGTCCA CAGACCGGGG chr2:27531441-27531521 29 1.95e-05 GGACCGTGAG GCTGTCCA TGGTGCTGAC chr19:34258928-34259008 29 1.95e-05 CGCTGATGGA GCTGTCCA GGGTCCTGAC chr12:131011526-13101160 27 1.95e-05 AGTGGTTGCT GCTGTCCA GGGTCCTGAT chr2:29516856-29516936 26 1.95e-05 GGGTTGGGGA GCTGTCCA CAAAGTAGGT chr8:62408858-62408938 33 1.95e-05 CAGGAAGGCA GCTGTCCA AGGTGCTGGA chr12:108608423-10860850 34 1.95e-05 CCCAAGGGTG GCTGTCCA TGGTGCTGAC chr16:12755732-12755812 28 1.95e-05 TCCAGCTAAC GCTGTCCA AGGTGCTGAA chr9:140779157-140779237 34 1.95e-05 CTCATGGGGC GCTGTCCA TGGTGCTGAG chr1:165918737-165918817 35 1.95e-05 GCTGCAGGGA GCTGTCCA GGGTCCTGTG chr11:116250303-11625038 33 1.95e-05 AGGGGAGTCT GCTGTCCA TGGTGCTGAC chr20:44669685-44669765 31 1.95e-05 CCCCGAGACC GCTGTCCA CGGTGCTGAA chr16:17232850-17232930 38 1.95e-05 GGGGCTGCTT GCTGTCCA TGGTACTGAA chr2:133246843-133246923 30 4.87e-05 AGGCGCCGGC GCTGTCCG TGGTGCTGGG chr11:33522567-33522647 17 4.87e-05 TCCACTTATT GCTGTCCG TGGTGCTGAA chr15:68113420-68113500 35 4.87e-05 AGCGCGGGGA GCTGTCCG TAGCTTGGTG chr16:23186111-23186191 41 4.87e-05 AACTATGGCT GCTGTCCG CAGTGCTGAT chr1:18582955-18583035 36 4.87e-05 AGCCCTGAGA GCTGTCCG TGGTGCTGAT chr22:50129123-50129203 31 4.87e-05 AATGTGGGGC GCTGTCCG AGGTCCTGAA chr2:215275811-215275891 28 4.87e-05 AGTTGTTGGC GCTGTCCG TGGTGCTGAG chr12:113918047-11391812 25 4.87e-05 AAAGACAGGA GCTGTCCG CGGTGCTGAA chr22:45371586-45371666 23 4.87e-05 TGCCCTGAGT GCTGTCCG TGGTGCTGAA chr2:98963102-98963182 38 4.87e-05 CGGGCGCGGC GCTGTCCG CAGCCCCCGG chr12:113229322-11322940 34 4.87e-05 GCATCTTAGC GCTGTCCG TGGTGCTGAC chr19:5404212-5404292 25 4.87e-05 GGGCTGTGTC GCTGTCCG TGGTACTGAA chr8:67089840-67089920 41 4.87e-05 TCGGATGGGC GCTGTCCG CGGTGCTGAA chr5:16179027-16179107 43 4.87e-05 GTAGGCGTGC GCTGTCCG TGGTGCTGAA chr2:119924803-119924883 33 4.87e-05 CAGGCCTGCC GCTGTCCG TGGTGCTAAT chr5:170108324-170108404 35 4.87e-05 CCAGTGCTGC GCTGTCCG TCGTGCTGAA chr18:55021279-55021359 26 4.87e-05 CGGGGCGGCC GCTGTCCG CGGTGCTGAT chr20:37314656-37314736 24 4.87e-05 TTGCGGCTGA GCTGTCCG AGGTGCTGAC chr1:1951123-1951203 43 4.87e-05 CCCGCCCGGT GCTGTCCG CCGTCCTGGT chr1:58926307-58926387 36 4.87e-05 CATGTGTGTA GCTGTCCG TAGTCCTGAA chr20:61810310-61810390 32 4.87e-05 AGGGTGCGGC GCTGTCCG CGGTGCTggc chr9:134674724-134674804 38 4.87e-05 TGTCTGGGGA GCTGTCCG TGGTGCTGAA chr11:122852632-12285271 38 4.87e-05 GGGGCGGGGA GCTGTCCG CGGTGCTGAA chr2:101087523-101087603 34 4.87e-05 GGGCCAGTGA GCTGTCCG AGGTGCTGAC chr9:140773201-140773281 41 4.87e-05 GGCCGGAGGC GCTGTCCG CGGTGCTGAC chr7:77455790-77455870 43 8.17e-05 tctcaatgtc actgtcca tggtggctgc chr17:10778787-10778867 25 8.17e-05 GAGGCCAGGA GCTCTCCA AGGTGCTGGA chr9:124818943-124819023 29 8.17e-05 CCACCTAGGA GCTCTCCA GAGTGCTGAA chr22:48563212-48563292 37 8.17e-05 GTCTTGTGGA GCTCTCCA AGGTGCTGAA chr8:55914031-55914111 28 8.17e-05 TGTGCCTGGC ACTGTCCA TGGTGCTGAG chr19:38945849-38945929 31 8.17e-05 CCTAGGGGAT GCTCTCCA TGGTCCTGAA chr12:119083184-11908326 35 8.17e-05 CTGGAAGGGC GCTCTCCA AGGTCCTGAA chr16:25513017-25513097 42 8.17e-05 TGCATTGGAT GCTCTCCA TGGTCCTGCC chr21:43396172-43396252 25 8.17e-05 TCCAGCCGCC GCTCTCCA GGGTCCTGTC chr1:11533847-11533927 32 8.17e-05 GCCAGCAGCC ACTGTCCA TGGTTCTGAA chr1:210306106-210306186 23 8.17e-05 GAGTGGTGGA ACTGTCCA TGGTACTGAC chr7:154106944-154107024 42 8.17e-05 AAGCCCAGTC GCTCTCCA AGGTCCTGAT chr12:100933142-10093322 32 8.17e-05 tgtgccaggc actgtcca aggtgctgga chr22:37040441-37040521 31 8.17e-05 GTTGGAAGAT GCTCTCCA AGGTGCTGAA chr15:91730640-91730720 37 8.17e-05 GGTAAAGGTC ACTGTCCA ATGTGCTGAA chr8:142902167-142902247 32 1.14e-04 GGGCGAGGAC TCTGTCCA TGGTGCTGAC chr7:131955444-131955524 32 1.14e-04 ATGCGGAGGA GCTGTCCT CAAGTTCTGG chr2:36655028-36655108 49 1.14e-04 CAGCACTATA GCTGTCCT ATGACTAAAG chr2:171670833-171670913 36 1.14e-04 AAGGACGGGC GCTGTCCT TCGTGCTGAA chr15:70268880-70268960 28 1.14e-04 ATCCTGTGCC TCTGTCCA TGGTTCTGAA chr7:63635501-63635581 13 1.14e-04 TCACCTATCC TCTGTCCA TGGTGCTGAC chr20:57717398-57717478 36 1.14e-04 GGGCACTGGA GCTGTCCT AGGTCCTGAA chr16:25276093-25276173 25 1.14e-04 ACCAGATTCC TCTGTCCA TGGTGCTGAG chr4:158141513-158141593 30 1.14e-04 GGAGCGAGGC GCTGTCCT CGGTGCTGAA chr1:30448091-30448171 34 1.14e-04 GGGGGAGGCC TCTGTCCA TGGTACTGAA chr15:89962758-89962838 26 1.14e-04 CGAGATGGGA GCTGTCCT CCCAGTGGTG chr10:16654405-16654485 36 1.14e-04 CTCTTTTTGC TCTGTCCA TGGTCCTGAA chr8:24770306-24770386 37 1.14e-04 CGACCTGGGC GCTGTCCT TGGTGCTGCC chr6:12752097-12752177 26 1.14e-04 AGTCAGGGGA GCTGTCCT CCCTTGGTGG chr3:139516734-139516814 38 1.14e-04 GGCTATGAGC GCTGTCCT TGGTGCTGAA chr7:140797368-140797448 47 1.14e-04 cgatacgggg tctgtcca tggtcctgaa chr19:10120207-10120287 40 1.34e-04 tccccgAAGC CCTGTCCA TGGTGCTGAT chr22:39220673-39220753 19 1.34e-04 TGCCCAATGC CCTGTCCA GGGTGCTGAA chr11:116476408-11647648 22 1.34e-04 GCCCCTGGGC CCTGTCCA AGGTGCTGAT chrX:48853508-48853588 65 1.34e-04 AGGGCCAGAC CCTGTCCA ATCACTCT chr1:210111107-210111187 21 1.34e-04 ACCAAGGAGA CCTGTCCA TGGTCCTGAC chr16:9133229-9133309 34 1.34e-04 gagaCACGTC CCTGTCCA CAGTGCTGAA chr9:136474571-136474651 33 1.64e-04 GGCCTGGGGA GCTGTCCC TGGTGCTGAC chr4:8677243-8677323 37 1.64e-04 GTCACTGGGA GCTGTCCC CGGTGCTGAC chr12:119071040-11907112 34 1.64e-04 tgcgcaaaga gctgtccc tggtgctgaa chr15:74557541-74557621 28 1.64e-04 AGGGCCAGCT GCTGTCCC TGGTGCTGAA chr14:100952983-10095306 30 1.64e-04 CTCCTGTGGC GCTGTCCC AGGTGCTGAA chr17:74906137-74906217 30 1.64e-04 CCGGCTGGGA GCTGTCCC CGAGTGCTAG chr5:167955685-167955765 37 1.64e-04 AACTGCTGTC GCTGTCCC TGGTGCTGAC chr4:170745027-170745107 31 1.77e-04 CCAACAGGGA GCTATCCA AGGTACTGGC chr5:175170825-175170905 31 1.77e-04 GCCTGAAGGT GCTATCCA AGGTACTGAG chr16:26328551-26328631 28 1.77e-04 GGCCTCTGTC GCTATCCA AGGTGCTGGC chr2:219826674-219826754 28 2.27e-04 TGGGCCGGGA ACTGTCCG AGGTGCTGAG chr20:43408953-43409033 34 2.27e-04 GTGTGCAGGA ACTGTCCG TGGTGCTGAC chr1:37486424-37486504 40 2.27e-04 GGCCCTGGCT GCTCTCCG TGGTGCTGAA chr9:34413386-34413466 34 2.27e-04 GATGAAAGGC GCTCTCCG TGGTGCTGAA chr3:131753947-131754027 48 2.27e-04 TGGCGGCGGC GCTCTCCG TGGTCCTGCC chr22:37859099-37859179 28 2.46e-04 GCAGTGTGGC TCTGTCCG CGGTGCTGAA chr11:133817321-13381740 13 2.59e-04 CGGGCACCCG ACTCTCCA GGGCAGCACC chr16:9025866-9025946 65 2.59e-04 CCCTCCAAGA ACTCTCCA AAACCCCA chr17:72187084-72187164 34 3.36e-04 CAGTGCTGGC CCTGTCCG TGGTGCTGAC chr16:68478116-68478196 48 3.36e-04 ACCTTGGACA GCTCTCCT CCACAGTGAT chr17:33124872-33124952 14 3.36e-04 GGCTTAGTGG GCTCTCCT GATCAGCACC chr10:79088310-79088390 30 3.36e-04 CACCTTGGCC CCTGTCCG TGGTCCTGAA chr11:72387976-72388056 29 3.36e-04 GCCACAGGCC TCTCTCCA GGGTGCTGAA chr20:40283683-40283763 5 3.62e-04 CTGG GCTGTTCA ACCACAGGGC chr5:141114558-141114638 23 3.62e-04 AGGAATTGAG GCTGTTCA GGACCTTGGT chr12:108797877-10879795 42 3.81e-04 CCACCCCAGT GCTATCCG TGGTGCTGGA chr20:61701345-61701425 39 4.02e-04 GCCTGGGGGC CCTCTCCA AGGTGCTGAC chr13:79163516-79163596 3 4.72e-04 CC GCTCTCCC CTTGACCCTC chr2:226264846-226264926 34 5.01e-04 GTGAGCAGGA ACTATCCA AGGTGCTAGA chr14:97406506-97406586 35 5.01e-04 TGGCCGTGTC TCTGTCCC TGGTGCTGAC chr6:105391834-105391914 33 5.52e-04 CGACAAAGTC GCTGGCCA CAGTGCTGAA chr13:28366588-28366668 41 5.52e-04 CACCACTAGC GCTGGCCA GCACCCCGCG chr3:38439019-38439099 34 6.11e-04 TCAGGCCCAA GCAGTCCA GGACCCTGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:34966192-34966272 2e-05 38_[+3]_34 chr9:19720534-19720614 2e-05 47_[+3]_25 chr11:129835293-12983537 2e-05 37_[+3]_35 chr5:92948380-92948460 2e-05 7_[+3]_65 chr6:90269379-90269459 2e-05 32_[+3]_40 chr20:56623321-56623401 2e-05 35_[+3]_37 chr15:79087541-79087621 2e-05 32_[+3]_40 chr6:116918137-116918217 2e-05 40_[+3]_32 chr10:73341937-73342017 2e-05 28_[+3]_44 chr1:110761519-110761599 2e-05 32_[+3]_40 chr22:42690535-42690615 2e-05 37_[+3]_35 chr5:52912930-52913010 2e-05 27_[+3]_45 chr5:141263099-141263179 2e-05 35_[+3]_37 chr12:58154322-58154402 2e-05 38_[+3]_34 chr10:85984583-85984663 2e-05 32_[+3]_40 chr14:77675187-77675267 2e-05 33_[+3]_39 chr19:54406483-54406563 2e-05 33_[+3]_39 chr8:35289931-35290011 2e-05 36_[+3]_36 chr17:45863220-45863300 2e-05 40_[+3]_32 chr8:28595105-28595185 2e-05 35_[+3]_37 chr9:104299380-104299460 2e-05 35_[+3]_37 chr2:242006562-242006642 2e-05 29_[+3]_43 chr2:27531441-27531521 2e-05 28_[+3]_44 chr19:34258928-34259008 2e-05 28_[+3]_44 chr12:131011526-13101160 2e-05 26_[+3]_46 chr2:29516856-29516936 2e-05 25_[+3]_47 chr8:62408858-62408938 2e-05 32_[+3]_40 chr12:108608423-10860850 2e-05 33_[+3]_39 chr16:12755732-12755812 2e-05 27_[+3]_45 chr9:140779157-140779237 2e-05 33_[+3]_39 chr1:165918737-165918817 2e-05 34_[+3]_38 chr11:116250303-11625038 2e-05 32_[+3]_40 chr20:44669685-44669765 2e-05 30_[+3]_42 chr16:17232850-17232930 2e-05 37_[+3]_35 chr2:133246843-133246923 4.9e-05 29_[+3]_43 chr11:33522567-33522647 4.9e-05 16_[+3]_56 chr15:68113420-68113500 4.9e-05 34_[+3]_38 chr16:23186111-23186191 4.9e-05 40_[+3]_32 chr1:18582955-18583035 4.9e-05 35_[+3]_37 chr22:50129123-50129203 4.9e-05 30_[+3]_42 chr2:215275811-215275891 4.9e-05 27_[+3]_45 chr12:113918047-11391812 4.9e-05 24_[+3]_48 chr22:45371586-45371666 4.9e-05 22_[+3]_50 chr2:98963102-98963182 4.9e-05 37_[+3]_35 chr12:113229322-11322940 4.9e-05 33_[+3]_39 chr19:5404212-5404292 4.9e-05 24_[+3]_48 chr8:67089840-67089920 4.9e-05 40_[+3]_32 chr5:16179027-16179107 4.9e-05 42_[+3]_30 chr2:119924803-119924883 4.9e-05 32_[+3]_40 chr5:170108324-170108404 4.9e-05 34_[+3]_38 chr18:55021279-55021359 4.9e-05 25_[+3]_47 chr20:37314656-37314736 4.9e-05 23_[+3]_49 chr1:1951123-1951203 4.9e-05 42_[+3]_30 chr1:58926307-58926387 4.9e-05 35_[+3]_37 chr20:61810310-61810390 4.9e-05 31_[+3]_41 chr9:134674724-134674804 4.9e-05 37_[+3]_35 chr11:122852632-12285271 4.9e-05 37_[+3]_35 chr2:101087523-101087603 4.9e-05 33_[+3]_39 chr9:140773201-140773281 4.9e-05 40_[+3]_32 chr7:77455790-77455870 8.2e-05 42_[+3]_30 chr17:10778787-10778867 8.2e-05 24_[+3]_48 chr9:124818943-124819023 8.2e-05 28_[+3]_44 chr22:48563212-48563292 8.2e-05 36_[+3]_36 chr8:55914031-55914111 8.2e-05 27_[+3]_45 chr19:38945849-38945929 8.2e-05 30_[+3]_42 chr12:119083184-11908326 8.2e-05 34_[+3]_38 chr16:25513017-25513097 8.2e-05 41_[+3]_31 chr21:43396172-43396252 8.2e-05 24_[+3]_48 chr1:11533847-11533927 8.2e-05 31_[+3]_41 chr1:210306106-210306186 8.2e-05 22_[+3]_50 chr7:154106944-154107024 8.2e-05 41_[+3]_31 chr12:100933142-10093322 8.2e-05 31_[+3]_41 chr22:37040441-37040521 8.2e-05 30_[+3]_42 chr15:91730640-91730720 8.2e-05 36_[+3]_36 chr8:142902167-142902247 0.00011 31_[+3]_41 chr7:131955444-131955524 0.00011 31_[+3]_41 chr2:36655028-36655108 0.00011 48_[+3]_24 chr2:171670833-171670913 0.00011 35_[+3]_37 chr15:70268880-70268960 0.00011 27_[+3]_45 chr7:63635501-63635581 0.00011 12_[+3]_60 chr20:57717398-57717478 0.00011 35_[+3]_37 chr16:25276093-25276173 0.00011 24_[+3]_48 chr4:158141513-158141593 0.00011 29_[+3]_43 chr1:30448091-30448171 0.00011 33_[+3]_39 chr15:89962758-89962838 0.00011 25_[+3]_47 chr10:16654405-16654485 0.00011 35_[+3]_37 chr8:24770306-24770386 0.00011 36_[+3]_36 chr6:12752097-12752177 0.00011 25_[+3]_47 chr3:139516734-139516814 0.00011 37_[+3]_35 chr7:140797368-140797448 0.00011 46_[+3]_26 chr19:10120207-10120287 0.00013 39_[+3]_33 chr22:39220673-39220753 0.00013 18_[+3]_54 chr11:116476408-11647648 0.00013 21_[+3]_51 chrX:48853508-48853588 0.00013 64_[+3]_8 chr1:210111107-210111187 0.00013 20_[+3]_52 chr16:9133229-9133309 0.00013 33_[+3]_39 chr9:136474571-136474651 0.00016 32_[+3]_40 chr4:8677243-8677323 0.00016 36_[+3]_36 chr12:119071040-11907112 0.00016 33_[+3]_39 chr15:74557541-74557621 0.00016 27_[+3]_45 chr14:100952983-10095306 0.00016 29_[+3]_43 chr17:74906137-74906217 0.00016 29_[+3]_43 chr5:167955685-167955765 0.00016 36_[+3]_36 chr4:170745027-170745107 0.00018 30_[+3]_42 chr5:175170825-175170905 0.00018 30_[+3]_42 chr16:26328551-26328631 0.00018 27_[+3]_45 chr2:219826674-219826754 0.00023 27_[+3]_45 chr20:43408953-43409033 0.00023 33_[+3]_39 chr1:37486424-37486504 0.00023 39_[+3]_33 chr9:34413386-34413466 0.00023 33_[+3]_39 chr3:131753947-131754027 0.00023 47_[+3]_25 chr22:37859099-37859179 0.00025 27_[+3]_45 chr11:133817321-13381740 0.00026 12_[+3]_60 chr16:9025866-9025946 0.00026 64_[+3]_8 chr17:72187084-72187164 0.00034 33_[+3]_39 chr16:68478116-68478196 0.00034 47_[+3]_25 chr17:33124872-33124952 0.00034 13_[+3]_59 chr10:79088310-79088390 0.00034 29_[+3]_43 chr11:72387976-72388056 0.00034 28_[+3]_44 chr20:40283683-40283763 0.00036 4_[+3]_68 chr5:141114558-141114638 0.00036 22_[+3]_50 chr12:108797877-10879795 0.00038 41_[+3]_31 chr20:61701345-61701425 0.0004 38_[+3]_34 chr13:79163516-79163596 0.00047 2_[+3]_70 chr2:226264846-226264926 0.0005 33_[+3]_39 chr14:97406506-97406586 0.0005 34_[+3]_38 chr6:105391834-105391914 0.00055 32_[+3]_40 chr13:28366588-28366668 0.00055 40_[+3]_32 chr3:38439019-38439099 0.00061 33_[+3]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCTGTCCA width=8 seqs=129 chr1:34966192-34966272 ( 39) GCTGTCCA 1 chr9:19720534-19720614 ( 48) GCTGTCCA 1 chr11:129835293-12983537 ( 38) GCTGTCCA 1 chr5:92948380-92948460 ( 8) GCTGTCCA 1 chr6:90269379-90269459 ( 33) GCTGTCCA 1 chr20:56623321-56623401 ( 36) GCTGTCCA 1 chr15:79087541-79087621 ( 33) GCTGTCCA 1 chr6:116918137-116918217 ( 41) GCTGTCCA 1 chr10:73341937-73342017 ( 29) GCTGTCCA 1 chr1:110761519-110761599 ( 33) GCTGTCCA 1 chr22:42690535-42690615 ( 38) GCTGTCCA 1 chr5:52912930-52913010 ( 28) GCTGTCCA 1 chr5:141263099-141263179 ( 36) GCTGTCCA 1 chr12:58154322-58154402 ( 39) GCTGTCCA 1 chr10:85984583-85984663 ( 33) GCTGTCCA 1 chr14:77675187-77675267 ( 34) GCTGTCCA 1 chr19:54406483-54406563 ( 34) GCTGTCCA 1 chr8:35289931-35290011 ( 37) GCTGTCCA 1 chr17:45863220-45863300 ( 41) GCTGTCCA 1 chr8:28595105-28595185 ( 36) GCTGTCCA 1 chr9:104299380-104299460 ( 36) GCTGTCCA 1 chr2:242006562-242006642 ( 30) GCTGTCCA 1 chr2:27531441-27531521 ( 29) GCTGTCCA 1 chr19:34258928-34259008 ( 29) GCTGTCCA 1 chr12:131011526-13101160 ( 27) GCTGTCCA 1 chr2:29516856-29516936 ( 26) GCTGTCCA 1 chr8:62408858-62408938 ( 33) GCTGTCCA 1 chr12:108608423-10860850 ( 34) GCTGTCCA 1 chr16:12755732-12755812 ( 28) GCTGTCCA 1 chr9:140779157-140779237 ( 34) GCTGTCCA 1 chr1:165918737-165918817 ( 35) GCTGTCCA 1 chr11:116250303-11625038 ( 33) GCTGTCCA 1 chr20:44669685-44669765 ( 31) GCTGTCCA 1 chr16:17232850-17232930 ( 38) GCTGTCCA 1 chr2:133246843-133246923 ( 30) GCTGTCCG 1 chr11:33522567-33522647 ( 17) GCTGTCCG 1 chr15:68113420-68113500 ( 35) GCTGTCCG 1 chr16:23186111-23186191 ( 41) GCTGTCCG 1 chr1:18582955-18583035 ( 36) GCTGTCCG 1 chr22:50129123-50129203 ( 31) GCTGTCCG 1 chr2:215275811-215275891 ( 28) GCTGTCCG 1 chr12:113918047-11391812 ( 25) GCTGTCCG 1 chr22:45371586-45371666 ( 23) GCTGTCCG 1 chr2:98963102-98963182 ( 38) GCTGTCCG 1 chr12:113229322-11322940 ( 34) GCTGTCCG 1 chr19:5404212-5404292 ( 25) GCTGTCCG 1 chr8:67089840-67089920 ( 41) GCTGTCCG 1 chr5:16179027-16179107 ( 43) GCTGTCCG 1 chr2:119924803-119924883 ( 33) GCTGTCCG 1 chr5:170108324-170108404 ( 35) GCTGTCCG 1 chr18:55021279-55021359 ( 26) GCTGTCCG 1 chr20:37314656-37314736 ( 24) GCTGTCCG 1 chr1:1951123-1951203 ( 43) GCTGTCCG 1 chr1:58926307-58926387 ( 36) GCTGTCCG 1 chr20:61810310-61810390 ( 32) GCTGTCCG 1 chr9:134674724-134674804 ( 38) GCTGTCCG 1 chr11:122852632-12285271 ( 38) GCTGTCCG 1 chr2:101087523-101087603 ( 34) GCTGTCCG 1 chr9:140773201-140773281 ( 41) GCTGTCCG 1 chr7:77455790-77455870 ( 43) ACTGTCCA 1 chr17:10778787-10778867 ( 25) GCTCTCCA 1 chr9:124818943-124819023 ( 29) GCTCTCCA 1 chr22:48563212-48563292 ( 37) GCTCTCCA 1 chr8:55914031-55914111 ( 28) ACTGTCCA 1 chr19:38945849-38945929 ( 31) GCTCTCCA 1 chr12:119083184-11908326 ( 35) GCTCTCCA 1 chr16:25513017-25513097 ( 42) GCTCTCCA 1 chr21:43396172-43396252 ( 25) GCTCTCCA 1 chr1:11533847-11533927 ( 32) ACTGTCCA 1 chr1:210306106-210306186 ( 23) ACTGTCCA 1 chr7:154106944-154107024 ( 42) GCTCTCCA 1 chr12:100933142-10093322 ( 32) ACTGTCCA 1 chr22:37040441-37040521 ( 31) GCTCTCCA 1 chr15:91730640-91730720 ( 37) ACTGTCCA 1 chr8:142902167-142902247 ( 32) TCTGTCCA 1 chr7:131955444-131955524 ( 32) GCTGTCCT 1 chr2:36655028-36655108 ( 49) GCTGTCCT 1 chr2:171670833-171670913 ( 36) GCTGTCCT 1 chr15:70268880-70268960 ( 28) TCTGTCCA 1 chr7:63635501-63635581 ( 13) TCTGTCCA 1 chr20:57717398-57717478 ( 36) GCTGTCCT 1 chr16:25276093-25276173 ( 25) TCTGTCCA 1 chr4:158141513-158141593 ( 30) GCTGTCCT 1 chr1:30448091-30448171 ( 34) TCTGTCCA 1 chr15:89962758-89962838 ( 26) GCTGTCCT 1 chr10:16654405-16654485 ( 36) TCTGTCCA 1 chr8:24770306-24770386 ( 37) GCTGTCCT 1 chr6:12752097-12752177 ( 26) GCTGTCCT 1 chr3:139516734-139516814 ( 38) GCTGTCCT 1 chr7:140797368-140797448 ( 47) TCTGTCCA 1 chr19:10120207-10120287 ( 40) CCTGTCCA 1 chr22:39220673-39220753 ( 19) CCTGTCCA 1 chr11:116476408-11647648 ( 22) CCTGTCCA 1 chrX:48853508-48853588 ( 65) CCTGTCCA 1 chr1:210111107-210111187 ( 21) CCTGTCCA 1 chr16:9133229-9133309 ( 34) CCTGTCCA 1 chr9:136474571-136474651 ( 33) GCTGTCCC 1 chr4:8677243-8677323 ( 37) GCTGTCCC 1 chr12:119071040-11907112 ( 34) GCTGTCCC 1 chr15:74557541-74557621 ( 28) GCTGTCCC 1 chr14:100952983-10095306 ( 30) GCTGTCCC 1 chr17:74906137-74906217 ( 30) GCTGTCCC 1 chr5:167955685-167955765 ( 37) GCTGTCCC 1 chr4:170745027-170745107 ( 31) GCTATCCA 1 chr5:175170825-175170905 ( 31) GCTATCCA 1 chr16:26328551-26328631 ( 28) GCTATCCA 1 chr2:219826674-219826754 ( 28) ACTGTCCG 1 chr20:43408953-43409033 ( 34) ACTGTCCG 1 chr1:37486424-37486504 ( 40) GCTCTCCG 1 chr9:34413386-34413466 ( 34) GCTCTCCG 1 chr3:131753947-131754027 ( 48) GCTCTCCG 1 chr22:37859099-37859179 ( 28) TCTGTCCG 1 chr11:133817321-13381740 ( 13) ACTCTCCA 1 chr16:9025866-9025946 ( 65) ACTCTCCA 1 chr17:72187084-72187164 ( 34) CCTGTCCG 1 chr16:68478116-68478196 ( 48) GCTCTCCT 1 chr17:33124872-33124952 ( 14) GCTCTCCT 1 chr10:79088310-79088390 ( 30) CCTGTCCG 1 chr11:72387976-72388056 ( 29) TCTCTCCA 1 chr20:40283683-40283763 ( 5) GCTGTTCA 1 chr5:141114558-141114638 ( 23) GCTGTTCA 1 chr12:108797877-10879795 ( 42) GCTATCCG 1 chr20:61701345-61701425 ( 39) CCTCTCCA 1 chr13:79163516-79163596 ( 3) GCTCTCCC 1 chr2:226264846-226264926 ( 34) ACTATCCA 1 chr14:97406506-97406586 ( 35) TCTGTCCC 1 chr6:105391834-105391914 ( 33) GCTGGCCA 1 chr13:28366588-28366668 ( 41) GCTGGCCA 1 chr3:38439019-38439099 ( 34) GCAGTCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.14319 E= 1.5e-119 -122 -212 137 -137 -1366 172 -1366 -1366 -468 -1366 -1366 231 -236 -104 145 -1366 -1366 -1366 -426 230 -1366 170 -1366 -369 -1366 172 -1366 -1366 154 -212 -17 -123 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 129 E= 1.5e-119 0.085271 0.069767 0.767442 0.077519 0.000000 1.000000 0.000000 0.000000 0.007752 0.000000 0.000000 0.992248 0.038760 0.147287 0.813953 0.000000 0.000000 0.000000 0.015504 0.984496 0.000000 0.984496 0.000000 0.015504 0.000000 1.000000 0.000000 0.000000 0.581395 0.069767 0.263566 0.085271 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCTGTCCA MEME-3 regular expression -------------------------------------------------------------------------------- GCTGTCC[AG] -------------------------------------------------------------------------------- Time 11.62 secs. ******************************************************************************** ******************************************************************************** MOTIF GGACAGCD MEME-4 width = 8 sites = 106 llr = 876 E-value = 1.4e-089 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::9:a:12 pos.-specific C ::19::8: probability G aa:1:a:4 matrix T ::::::13 bits 2.3 * 2.1 * 1.9 *** ** 1.6 *** ** Relative 1.4 *** ** Entropy 1.2 ****** (11.9 bits) 0.9 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGACAGCG consensus T sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:3307486-3307566 35 1.90e-05 CGGGGGTCGC GGACAGCT CCCGGCTCTG chr19:51198549-51198629 39 1.90e-05 tcagcaccgc ggacagct ccggaggcgg chr3:11006422-11006502 44 1.90e-05 TCAGCACCTT GGACAGCT TCCAAAGGCG chr7:32467444-32467524 54 1.90e-05 TCAGCACCGG GGACAGCT CCTGCCTCGC chr12:67587649-67587729 33 1.90e-05 TCAGGACCCT GGACAGCT CTACTAATCC chr1:37432023-37432103 45 1.90e-05 TCAGCACCAG GGACAGCT CCAGCAAGGT chr7:152759145-152759225 39 1.90e-05 actgctacgt ggacagct ccacgccccg chr19:15649750-15649830 39 1.90e-05 TCAGGACTGA GGACAGCT CCCTTCAAGC chr8:28514893-28514973 32 1.90e-05 CTGGCACCTT GGACAGCT CCACTCTGCC chr12:119950850-11995093 34 1.90e-05 TCAGCACCGT GGACAGCT ACAAACATTA chr20:61713793-61713873 32 1.90e-05 CCAGGGAGGC GGACAGCT CCATTCACTG chr7:104192710-104192790 44 1.90e-05 TCAGCACCAT GGACAGCT CAACGTGAGC chr12:95273502-95273582 41 1.90e-05 TTAGCACCAT GGACAGCT CCCAGGTTAT chr5:6328413-6328493 35 1.90e-05 CTGCAGTGTC GGACAGCT CCATACACCT chr17:33124872-33124952 34 1.90e-05 TCAGCACCTA GGACAGCT CCACCCATCG chr18:5197154-5197234 35 1.90e-05 TCAGCACCCC GGACAGCT CCCGCCGCTA chr14:74892726-74892806 49 1.90e-05 TCAGCACCGC GGACAGCT cccgcccgca chr15:77994990-77995070 35 1.90e-05 TCAGCACCCC GGACAGCT GCCTTCCTGA chr11:10400716-10400796 37 1.90e-05 CCTCCCTAGT GGACAGCT CCCCATCAGC chr1:18246084-18246164 44 1.90e-05 TCAGCACCAG GGACAGCT CCCATTCTCC chr16:25758639-25758719 38 1.90e-05 CGTTGGCCGT GGACAGCT CCCCAGGCAA chr20:34973071-34973151 44 1.90e-05 TCAGAACCTT GGACAGCT CCCAGTGGAC chr16:8076611-8076691 38 1.90e-05 CCGTGGGTTT GGACAGCT CCCTTTGGCT chr20:41816551-41816631 54 1.90e-05 GTTCAGCACT GGACAGCT TCCCGAGCCG chr2:166094963-166095043 42 4.73e-05 TCAGCACCAT GGACAGCG TTACTGCAAT chr3:123936527-123936607 45 4.73e-05 TCAGGACCAA GGACAGCG GCATACATGT chr8:56015523-56015603 47 4.73e-05 TCAGCACCGA GGACAGCG CCACGGCCGC chr9:137990390-137990470 43 4.73e-05 GTGCTGAAGT GGACAGCG CCCGCCTGGC chr2:11810052-11810132 45 4.73e-05 CCACGTGCGC GGACAGCG CATTGCCCGC chr8:50824223-50824303 50 4.73e-05 CAGAGGGGAT GGACAGCG TCTCCGGACT chr9:139093728-139093808 45 4.73e-05 ACCGCGGACC GGACAGCG CCTCGGCCGC chr2:59061690-59061770 47 4.73e-05 TCAGGACCGT GGACAGCG ACACTCAAAT chr5:13867077-13867157 37 4.73e-05 tcagcaccaa ggacagcg cccggcaATT chr19:7676572-7676652 46 4.73e-05 CCTTTGGCCT GGACAGCG ACGTGGATGT chr11:117467960-11746804 40 4.73e-05 TCAGGACCGG GGACAGCG CCAGAACGGC chr6:159688358-159688438 45 4.73e-05 TCAGGACCAT GGACAGCG TCTCATGCCA chr9:140033689-140033769 34 4.73e-05 TCAGCACCGC GGACAGCG CCGGCCGCGT chr14:58332221-58332301 43 4.73e-05 TCAGCACCGA GGACAGCG GACATACTTT chr5:132946811-132946891 51 4.73e-05 GAGGGCTGCT GGACAGCG CCCCGGCACC chr5:139188309-139188389 40 4.73e-05 CCAGCACCCT GGACAGCG CCCCACGCTG chr12:118870080-11887016 40 4.73e-05 TGGGTACCTT GGACAGCG CACCACCATC chr20:61747924-61748004 47 4.73e-05 TCAGAACCTC GGACAGCG CCGCGGCCCA chrX:106568016-106568096 45 4.73e-05 tgggcaccat ggacagcg gcaggaggcc chr16:750750-750830 45 4.73e-05 ccAGCACCAT GGACAGCG GCCGCCCCAG chr12:3601510-3601590 42 4.73e-05 TCAGCACCAG GGACAGCG TCCGCCCCTG chr15:73639213-73639293 42 4.73e-05 TCAGCACCAC GGACAGCG CCCAGCACAC chr11:134897528-13489760 43 4.73e-05 TTTCAGCACT GGACAGCG ACAAGCAGGG chr2:44243571-44243651 49 4.73e-05 TCAGCACCAT GGACAGCG AGGCAGTAGC chr20:31797699-31797779 36 6.63e-05 TCAGCACCAC GGACAGCA GTCACGCCAG chr2:36655028-36655108 36 6.63e-05 CCTGGCTGGT GGACAGCA CTATAGCTGT chr3:51963611-51963691 42 6.63e-05 ACTGGGAACT GGACAGCA ACCAGAAGAG chr19:36466679-36466759 43 6.63e-05 TCAGAACCAT GGACAGCA GTTCAGGCAT chr8:142577198-142577278 45 6.63e-05 TCAGCACCAT GGACAGCA CCAAAGGATG chr14:93380561-93380641 38 6.63e-05 TCAGGACCAC GGACAGCA GCCTGCGAAC chr14:75127731-75127811 39 6.63e-05 CTGGCACCAT GGACAGCA ATCAGGGAAG chr6:30279007-30279087 32 6.63e-05 TCAGGACCTT GGACAGCA GAAAAAGGAC chr1:7135550-7135630 32 6.63e-05 TCAGCACCAA GGACAGCA GCCCATCGCT chr12:65220257-65220337 42 6.63e-05 CCTCGCGTCC GGACAGCA ACCTCACTTG chr10:132722546-13272262 33 6.63e-05 TCAGCACCAT GGACAGCA GTCCCGGCCC chr13:93970948-93971028 38 6.63e-05 ACCTGGGAGA GGACAGCA ATTGGCAATG chr11:133817321-13381740 33 6.63e-05 GCAGCACCTA GGACAGCA GCTGCAGTAC chr16:13130612-13130692 36 6.63e-05 TCAGGACCAC GGACAGCA CCCCCagtac chr6:154360632-154360712 50 6.63e-05 TCAGTACCAT GGACAGCA GCGCTGCCCC chr5:132901835-132901915 36 6.63e-05 CCAGCACCAT GGACAGCA GCACACTACC chr8:142970840-142970920 43 6.63e-05 tcagcaccag ggacagca gccaggcggg chr12:53135314-53135394 41 9.74e-05 TCAGCACCAA GGACAGAG CACCGCTTCC chr22:50309379-50309459 30 9.74e-05 tcagcaccaa ggacagag gccagcCGCT chr10:72075756-72075836 45 9.74e-05 CCAGCACTCT GGACAGAG ACAGGGACAG chr14:78996554-78996634 46 9.74e-05 TCAGCACCGT GGACAGAG GCACCAGGTT chr7:105054636-105054716 49 9.74e-05 GCAGTACCTT GGACAGAG ATGCGACTGG chr2:207507534-207507614 39 9.74e-05 TCAGTACCTT GGACAGAG TCCTGCCCTC chr10:102440641-10244072 41 9.74e-05 TCAGCACCCT GGACAGAG GTGGCGGCGG chr4:147558181-147558261 41 9.74e-05 TAAGGACCAT GGACAGAG CCCGTCGCGC chr5:63259080-63259160 27 1.10e-04 TCAGCACCTG GGACAGTT CTAAGCAATG chr5:174749086-174749166 41 1.10e-04 TCAGCACCAA GGACAGTT CCAAGGTACA chr3:42341626-42341706 47 1.10e-04 CTGCAGTGGA GGACAGTT CCCTGCTGTG chr5:123882502-123882582 47 1.60e-04 TCAGCACCAA GGAGAGCT CCAGGCCAAT chr1:93521938-93522018 40 1.60e-04 CCAGTACCCT GGAGAGCT CCTAGAGCAT chrX:48853508-48853588 43 1.60e-04 TCAGCACCAC GGACAGTG CTCCAGGGCC chr1:202626514-202626594 36 1.60e-04 TCAGGACCCT GGACAGAA GCTGCTCCTG chrX:18165263-18165343 51 1.60e-04 TCAGGACCCT GGAGAGCT CTTAGCCCAC chr20:859545-859625 14 1.60e-04 CAATGCCCTT GGACAGAA CAAGAATTCA chr22:43845278-43845358 31 1.60e-04 tcagcaccac ggacagtg ccAACCCCCC chr3:10795819-10795899 39 1.60e-04 TCAGGACCCT GGAGAGCT CCGAGCCAGC chr16:9025866-9025946 33 1.60e-04 TCAGCACCAC GGACAGTG CCATGCTCAC chr5:92948380-92948460 25 1.87e-04 ATGGTGCTGG GGAGAGCG CGGCTTCATT chr7:8482568-8482648 24 1.87e-04 GCCAGGGCCG GGAGAGCG ACTCTTCAGC chr1:183386046-183386126 36 1.87e-04 CGCCGCCTCT GGAGAGCG CCTTGCTGGC chr7:37092428-37092508 38 2.19e-04 TCAGCACCAA GGAGAGCA CCAACCCCCC chr19:39714492-39714572 37 2.19e-04 TCAGAACCAC GGAGAGCA GCCCAGTGGT chr10:102085080-10208516 41 2.19e-04 CCAGGACCTT GGAGAGCA CCGAAGTGGC chr15:74557541-74557621 20 2.48e-04 AGCCCTCAAG GGCCAGCT GCTGTCCCTG chr1:50774668-50774748 46 3.03e-04 TCAGAACCAT GGATAGCT CCATGGTGCT chr22:45371586-45371666 57 3.03e-04 GGGCTCTTGG GGCCAGCG GGTCCTCCCA chr19:13574280-13574360 45 3.03e-04 TCAGCACCAC GGCCAGCG GCAAAGAGGC chr19:34175264-34175344 38 3.03e-04 TCAGGACCCA GGCCAGCG CTCCCCAGCA chr19:55028834-55028914 49 3.03e-04 TCAGCACCAT GGCCAGCG TCCAGGAAGC chr20:43405795-43405875 39 3.22e-04 TCAGCACCAG GGATAGCG CCCACACTGC chr2:73507188-73507268 40 3.22e-04 tcagcaccct ggatagcg accccccctg chr16:25276093-25276173 56 3.51e-04 CCAGCCTTTT GGCCAGCA GGCTGATGAA chr20:62092876-62092956 38 3.51e-04 TCAGGACCAT GGCCAGCA CCCCGGGGGC chr11:113862026-11386210 54 3.51e-04 TCAGCACCAC GGCCAGCA CCAGCTGGTT chr5:133877561-133877641 37 4.22e-04 TCAGGACCCT GGACAGGG CTAAGGCCTG chr17:29721748-29721828 49 4.22e-04 gcaggaccat ggacaggg ccccgaggca chr9:34494105-34494185 42 4.71e-04 TCAGCACCTC GGAGAGTT CCCATGGCTG chr5:176231092-176231172 3 4.71e-04 ct ggagagtt ctcaagaaat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:3307486-3307566 1.9e-05 34_[+4]_38 chr19:51198549-51198629 1.9e-05 38_[+4]_34 chr3:11006422-11006502 1.9e-05 43_[+4]_29 chr7:32467444-32467524 1.9e-05 53_[+4]_19 chr12:67587649-67587729 1.9e-05 32_[+4]_40 chr1:37432023-37432103 1.9e-05 44_[+4]_28 chr7:152759145-152759225 1.9e-05 38_[+4]_34 chr19:15649750-15649830 1.9e-05 38_[+4]_34 chr8:28514893-28514973 1.9e-05 31_[+4]_41 chr12:119950850-11995093 1.9e-05 33_[+4]_39 chr20:61713793-61713873 1.9e-05 31_[+4]_41 chr7:104192710-104192790 1.9e-05 43_[+4]_29 chr12:95273502-95273582 1.9e-05 40_[+4]_32 chr5:6328413-6328493 1.9e-05 34_[+4]_38 chr17:33124872-33124952 1.9e-05 33_[+4]_39 chr18:5197154-5197234 1.9e-05 34_[+4]_38 chr14:74892726-74892806 1.9e-05 48_[+4]_24 chr15:77994990-77995070 1.9e-05 34_[+4]_38 chr11:10400716-10400796 1.9e-05 36_[+4]_36 chr1:18246084-18246164 1.9e-05 43_[+4]_29 chr16:25758639-25758719 1.9e-05 37_[+4]_35 chr20:34973071-34973151 1.9e-05 43_[+4]_29 chr16:8076611-8076691 1.9e-05 37_[+4]_35 chr20:41816551-41816631 1.9e-05 53_[+4]_19 chr2:166094963-166095043 4.7e-05 41_[+4]_31 chr3:123936527-123936607 4.7e-05 44_[+4]_28 chr8:56015523-56015603 4.7e-05 46_[+4]_26 chr9:137990390-137990470 4.7e-05 42_[+4]_30 chr2:11810052-11810132 4.7e-05 44_[+4]_28 chr8:50824223-50824303 4.7e-05 49_[+4]_23 chr9:139093728-139093808 4.7e-05 44_[+4]_28 chr2:59061690-59061770 4.7e-05 46_[+4]_26 chr5:13867077-13867157 4.7e-05 36_[+4]_36 chr19:7676572-7676652 4.7e-05 45_[+4]_27 chr11:117467960-11746804 4.7e-05 39_[+4]_33 chr6:159688358-159688438 4.7e-05 44_[+4]_28 chr9:140033689-140033769 4.7e-05 33_[+4]_39 chr14:58332221-58332301 4.7e-05 42_[+4]_30 chr5:132946811-132946891 4.7e-05 50_[+4]_22 chr5:139188309-139188389 4.7e-05 39_[+4]_33 chr12:118870080-11887016 4.7e-05 39_[+4]_33 chr20:61747924-61748004 4.7e-05 46_[+4]_26 chrX:106568016-106568096 4.7e-05 44_[+4]_28 chr16:750750-750830 4.7e-05 44_[+4]_28 chr12:3601510-3601590 4.7e-05 41_[+4]_31 chr15:73639213-73639293 4.7e-05 41_[+4]_31 chr11:134897528-13489760 4.7e-05 42_[+4]_30 chr2:44243571-44243651 4.7e-05 48_[+4]_24 chr20:31797699-31797779 6.6e-05 35_[+4]_37 chr2:36655028-36655108 6.6e-05 35_[+4]_37 chr3:51963611-51963691 6.6e-05 41_[+4]_31 chr19:36466679-36466759 6.6e-05 42_[+4]_30 chr8:142577198-142577278 6.6e-05 44_[+4]_28 chr14:93380561-93380641 6.6e-05 37_[+4]_35 chr14:75127731-75127811 6.6e-05 38_[+4]_34 chr6:30279007-30279087 6.6e-05 31_[+4]_41 chr1:7135550-7135630 6.6e-05 31_[+4]_41 chr12:65220257-65220337 6.6e-05 41_[+4]_31 chr10:132722546-13272262 6.6e-05 32_[+4]_40 chr13:93970948-93971028 6.6e-05 37_[+4]_35 chr11:133817321-13381740 6.6e-05 32_[+4]_40 chr16:13130612-13130692 6.6e-05 35_[+4]_37 chr6:154360632-154360712 6.6e-05 49_[+4]_23 chr5:132901835-132901915 6.6e-05 35_[+4]_37 chr8:142970840-142970920 6.6e-05 42_[+4]_30 chr12:53135314-53135394 9.7e-05 40_[+4]_32 chr22:50309379-50309459 9.7e-05 29_[+4]_43 chr10:72075756-72075836 9.7e-05 44_[+4]_28 chr14:78996554-78996634 9.7e-05 45_[+4]_27 chr7:105054636-105054716 9.7e-05 48_[+4]_24 chr2:207507534-207507614 9.7e-05 38_[+4]_34 chr10:102440641-10244072 9.7e-05 40_[+4]_32 chr4:147558181-147558261 9.7e-05 40_[+4]_32 chr5:63259080-63259160 0.00011 26_[+4]_46 chr5:174749086-174749166 0.00011 40_[+4]_32 chr3:42341626-42341706 0.00011 46_[+4]_26 chr5:123882502-123882582 0.00016 46_[+4]_26 chr1:93521938-93522018 0.00016 39_[+4]_33 chrX:48853508-48853588 0.00016 42_[+4]_30 chr1:202626514-202626594 0.00016 35_[+4]_37 chrX:18165263-18165343 0.00016 50_[+4]_22 chr20:859545-859625 0.00016 13_[+4]_59 chr22:43845278-43845358 0.00016 30_[+4]_42 chr3:10795819-10795899 0.00016 38_[+4]_34 chr16:9025866-9025946 0.00016 32_[+4]_40 chr5:92948380-92948460 0.00019 24_[+4]_48 chr7:8482568-8482648 0.00019 23_[+4]_49 chr1:183386046-183386126 0.00019 35_[+4]_37 chr7:37092428-37092508 0.00022 37_[+4]_35 chr19:39714492-39714572 0.00022 36_[+4]_36 chr10:102085080-10208516 0.00022 40_[+4]_32 chr15:74557541-74557621 0.00025 19_[+4]_53 chr1:50774668-50774748 0.0003 45_[+4]_27 chr22:45371586-45371666 0.0003 56_[+4]_16 chr19:13574280-13574360 0.0003 44_[+4]_28 chr19:34175264-34175344 0.0003 37_[+4]_35 chr19:55028834-55028914 0.0003 48_[+4]_24 chr20:43405795-43405875 0.00032 38_[+4]_34 chr2:73507188-73507268 0.00032 39_[+4]_33 chr16:25276093-25276173 0.00035 55_[+4]_17 chr20:62092876-62092956 0.00035 37_[+4]_35 chr11:113862026-11386210 0.00035 53_[+4]_19 chr5:133877561-133877641 0.00042 36_[+4]_36 chr17:29721748-29721828 0.00042 48_[+4]_24 chr9:34494105-34494185 0.00047 41_[+4]_31 chr5:176231092-176231172 0.00047 2_[+4]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGACAGCD width=8 seqs=106 chr19:3307486-3307566 ( 35) GGACAGCT 1 chr19:51198549-51198629 ( 39) GGACAGCT 1 chr3:11006422-11006502 ( 44) GGACAGCT 1 chr7:32467444-32467524 ( 54) GGACAGCT 1 chr12:67587649-67587729 ( 33) GGACAGCT 1 chr1:37432023-37432103 ( 45) GGACAGCT 1 chr7:152759145-152759225 ( 39) GGACAGCT 1 chr19:15649750-15649830 ( 39) GGACAGCT 1 chr8:28514893-28514973 ( 32) GGACAGCT 1 chr12:119950850-11995093 ( 34) GGACAGCT 1 chr20:61713793-61713873 ( 32) GGACAGCT 1 chr7:104192710-104192790 ( 44) GGACAGCT 1 chr12:95273502-95273582 ( 41) GGACAGCT 1 chr5:6328413-6328493 ( 35) GGACAGCT 1 chr17:33124872-33124952 ( 34) GGACAGCT 1 chr18:5197154-5197234 ( 35) GGACAGCT 1 chr14:74892726-74892806 ( 49) GGACAGCT 1 chr15:77994990-77995070 ( 35) GGACAGCT 1 chr11:10400716-10400796 ( 37) GGACAGCT 1 chr1:18246084-18246164 ( 44) GGACAGCT 1 chr16:25758639-25758719 ( 38) GGACAGCT 1 chr20:34973071-34973151 ( 44) GGACAGCT 1 chr16:8076611-8076691 ( 38) GGACAGCT 1 chr20:41816551-41816631 ( 54) GGACAGCT 1 chr2:166094963-166095043 ( 42) GGACAGCG 1 chr3:123936527-123936607 ( 45) GGACAGCG 1 chr8:56015523-56015603 ( 47) GGACAGCG 1 chr9:137990390-137990470 ( 43) GGACAGCG 1 chr2:11810052-11810132 ( 45) GGACAGCG 1 chr8:50824223-50824303 ( 50) GGACAGCG 1 chr9:139093728-139093808 ( 45) GGACAGCG 1 chr2:59061690-59061770 ( 47) GGACAGCG 1 chr5:13867077-13867157 ( 37) GGACAGCG 1 chr19:7676572-7676652 ( 46) GGACAGCG 1 chr11:117467960-11746804 ( 40) GGACAGCG 1 chr6:159688358-159688438 ( 45) GGACAGCG 1 chr9:140033689-140033769 ( 34) GGACAGCG 1 chr14:58332221-58332301 ( 43) GGACAGCG 1 chr5:132946811-132946891 ( 51) GGACAGCG 1 chr5:139188309-139188389 ( 40) GGACAGCG 1 chr12:118870080-11887016 ( 40) GGACAGCG 1 chr20:61747924-61748004 ( 47) GGACAGCG 1 chrX:106568016-106568096 ( 45) GGACAGCG 1 chr16:750750-750830 ( 45) GGACAGCG 1 chr12:3601510-3601590 ( 42) GGACAGCG 1 chr15:73639213-73639293 ( 42) GGACAGCG 1 chr11:134897528-13489760 ( 43) GGACAGCG 1 chr2:44243571-44243651 ( 49) GGACAGCG 1 chr20:31797699-31797779 ( 36) GGACAGCA 1 chr2:36655028-36655108 ( 36) GGACAGCA 1 chr3:51963611-51963691 ( 42) GGACAGCA 1 chr19:36466679-36466759 ( 43) GGACAGCA 1 chr8:142577198-142577278 ( 45) GGACAGCA 1 chr14:93380561-93380641 ( 38) GGACAGCA 1 chr14:75127731-75127811 ( 39) GGACAGCA 1 chr6:30279007-30279087 ( 32) GGACAGCA 1 chr1:7135550-7135630 ( 32) GGACAGCA 1 chr12:65220257-65220337 ( 42) GGACAGCA 1 chr10:132722546-13272262 ( 33) GGACAGCA 1 chr13:93970948-93971028 ( 38) GGACAGCA 1 chr11:133817321-13381740 ( 33) GGACAGCA 1 chr16:13130612-13130692 ( 36) GGACAGCA 1 chr6:154360632-154360712 ( 50) GGACAGCA 1 chr5:132901835-132901915 ( 36) GGACAGCA 1 chr8:142970840-142970920 ( 43) GGACAGCA 1 chr12:53135314-53135394 ( 41) GGACAGAG 1 chr22:50309379-50309459 ( 30) GGACAGAG 1 chr10:72075756-72075836 ( 45) GGACAGAG 1 chr14:78996554-78996634 ( 46) GGACAGAG 1 chr7:105054636-105054716 ( 49) GGACAGAG 1 chr2:207507534-207507614 ( 39) GGACAGAG 1 chr10:102440641-10244072 ( 41) GGACAGAG 1 chr4:147558181-147558261 ( 41) GGACAGAG 1 chr5:63259080-63259160 ( 27) GGACAGTT 1 chr5:174749086-174749166 ( 41) GGACAGTT 1 chr3:42341626-42341706 ( 47) GGACAGTT 1 chr5:123882502-123882582 ( 47) GGAGAGCT 1 chr1:93521938-93522018 ( 40) GGAGAGCT 1 chrX:48853508-48853588 ( 43) GGACAGTG 1 chr1:202626514-202626594 ( 36) GGACAGAA 1 chrX:18165263-18165343 ( 51) GGAGAGCT 1 chr20:859545-859625 ( 14) GGACAGAA 1 chr22:43845278-43845358 ( 31) GGACAGTG 1 chr3:10795819-10795899 ( 39) GGAGAGCT 1 chr16:9025866-9025946 ( 33) GGACAGTG 1 chr5:92948380-92948460 ( 25) GGAGAGCG 1 chr7:8482568-8482648 ( 24) GGAGAGCG 1 chr1:183386046-183386126 ( 36) GGAGAGCG 1 chr7:37092428-37092508 ( 38) GGAGAGCA 1 chr19:39714492-39714572 ( 37) GGAGAGCA 1 chr10:102085080-10208516 ( 41) GGAGAGCA 1 chr15:74557541-74557621 ( 20) GGCCAGCT 1 chr1:50774668-50774748 ( 46) GGATAGCT 1 chr22:45371586-45371666 ( 57) GGCCAGCG 1 chr19:13574280-13574360 ( 45) GGCCAGCG 1 chr19:34175264-34175344 ( 38) GGCCAGCG 1 chr19:55028834-55028914 ( 49) GGCCAGCG 1 chr20:43405795-43405875 ( 39) GGATAGCG 1 chr2:73507188-73507268 ( 40) GGATAGCG 1 chr16:25276093-25276173 ( 56) GGCCAGCA 1 chr20:62092876-62092956 ( 38) GGCCAGCA 1 chr11:113862026-11386210 ( 54) GGCCAGCA 1 chr5:133877561-133877641 ( 37) GGACAGGG 1 chr17:29721748-29721828 ( 49) GGACAGGG 1 chr9:34494105-34494185 ( 42) GGAGAGTT 1 chr5:176231092-176231172 ( 3) GGAGAGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.97196 E= 1.4e-089 -1337 -1337 175 -1337 -1337 -1337 175 -1337 221 -201 -1337 -1337 -1337 150 -139 -282 233 -1337 -1337 -1337 -1337 -1337 175 -1337 -108 142 -397 -141 24 -1337 55 72 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 106 E= 1.4e-089 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.924528 0.075472 0.000000 0.000000 0.000000 0.858491 0.113208 0.028302 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.094340 0.811321 0.018868 0.075472 0.235849 0.000000 0.433962 0.330189 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGACAGCD MEME-4 regular expression -------------------------------------------------------------------------------- GGACAGC[GTA] -------------------------------------------------------------------------------- Time 14.69 secs. ******************************************************************************** ******************************************************************************** MOTIF AGAAGAAA MEME-5 width = 8 sites = 2 llr = 24 E-value = 1.8e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a:aa:aaa pos.-specific C :::::::: probability G :a::a::: matrix T :::::::: bits 2.3 * ** *** 2.1 * ** *** 1.9 ******** 1.6 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.5 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AGAAGAAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:19720534-19720614 34 5.48e-06 TGGAACTGCT AGAAGAAA GCTGTAGCTG chr6:90269379-90269459 6 5.48e-06 TGGTG AGAAGAAA TTCCCAGAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:19720534-19720614 5.5e-06 33_[+5]_39 chr6:90269379-90269459 5.5e-06 5_[+5]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGAAGAAA width=8 seqs=2 chr9:19720534-19720614 ( 34) AGAAGAAA 1 chr6:90269379-90269459 ( 6) AGAAGAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.8e+004 232 -765 -765 -765 -765 -765 175 -765 232 -765 -765 -765 232 -765 -765 -765 -765 -765 175 -765 232 -765 -765 -765 232 -765 -765 -765 232 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.8e+004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAGAAA MEME-5 regular expression -------------------------------------------------------------------------------- AGAAGAAA -------------------------------------------------------------------------------- Time 17.63 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:140773201-140773281 3.73e-03 40_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 23 chr8:99439141-99439221 2.80e-04 29_[+3(4.87e-05)]_1_[+2(1.98e-05)]_\ 34 chr13:28366588-28366668 1.96e-03 26_[+2(1.98e-05)]_46 chr2:44243571-44243651 7.10e-05 38_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 24 chr19:55028834-55028914 9.11e-04 38_[+2(1.98e-05)]_34 chr16:70896066-70896146 2.87e-03 30_[+3(1.95e-05)]_42 chr7:140797368-140797448 7.08e-03 55_[+1(3.79e-05)]_17 chr16:17232850-17232930 7.41e-04 37_[+3(1.95e-05)]_1_[+1(6.93e-05)]_\ 26 chr8:142970840-142970920 1.50e-03 32_[+2(1.98e-05)]_2_[+4(6.63e-05)]_\ 30 chr2:101087523-101087603 6.33e-04 33_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 30 chr3:139516734-139516814 2.35e-03 46_[+1(1.88e-05)]_26 chr20:44669685-44669765 3.98e-04 30_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 33 chr17:29721748-29721828 1.25e-01 80 chr11:116250303-11625038 1.26e-03 32_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 31 chr16:9025866-9025946 4.74e-04 22_[+2(1.98e-05)]_50 chr4:147558181-147558261 4.41e-02 40_[+4(9.74e-05)]_32 chr15:91730640-91730720 1.14e-02 36_[+3(8.17e-05)]_36 chr5:14628625-14628705 2.65e-02 43_[+1(1.88e-05)]_29 chr1:165918737-165918817 2.07e-03 34_[+3(1.95e-05)]_38 chr5:167955685-167955765 5.50e-03 45_[+1(1.88e-05)]_27 chr10:102440641-10244072 4.22e-04 30_[+2(1.98e-05)]_2_[+4(9.74e-05)]_\ 32 chr20:41816551-41816631 3.88e-03 45_[+2(5.23e-05)]_[+4(1.90e-05)]_19 chr5:132901835-132901915 1.49e-02 35_[+4(6.63e-05)]_37 chr6:154360632-154360712 7.90e-03 39_[+2(7.85e-05)]_2_[+4(6.63e-05)]_\ 23 chr9:140779157-140779237 9.46e-06 33_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 30 chr3:131753947-131754027 5.41e-02 80 chr16:12755732-12755812 2.34e-03 27_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 36 chr11:72387976-72388056 1.92e-03 37_[+1(1.88e-05)]_35 chr17:74906137-74906217 6.12e-03 80 chr12:108608423-10860850 3.60e-04 33_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 30 chr22:37040441-37040521 1.65e-04 30_[+3(8.17e-05)]_1_[+1(1.88e-05)]_\ 33 chr3:10795819-10795899 3.42e-03 28_[+2(3.93e-05)]_44 chr5:141114558-141114638 1.79e-03 27_[+2(3.93e-05)]_4_[+2(1.98e-05)]_\ 33 chr16:8076611-8076691 3.56e-04 21_[+2(1.98e-05)]_8_[+4(1.90e-05)]_\ 35 chr22:43845278-43845358 7.13e-03 20_[+2(1.98e-05)]_52 chr16:13130612-13130692 1.46e-04 25_[+2(3.93e-05)]_2_[+4(6.63e-05)]_\ 37 chr12:100933142-10093322 1.26e-03 31_[+3(8.17e-05)]_41 chr11:122852632-12285271 9.43e-04 37_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 26 chr9:134674724-134674804 3.42e-04 37_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 26 chr11:134897528-13489760 2.29e-03 34_[+2(5.23e-05)]_[+4(4.73e-05)]_30 chr20:61810310-61810390 4.52e-03 31_[+3(4.87e-05)]_41 chr2:207507534-207507614 3.87e-03 28_[+2(7.85e-05)]_2_[+4(9.74e-05)]_\ 34 chr11:113862026-11386210 3.33e-03 43_[+2(1.98e-05)]_29 chr13:79163516-79163596 6.32e-03 35_[+1(1.88e-05)]_37 chr15:73639213-73639293 1.50e-03 31_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 31 chr10:102085080-10208516 3.71e-03 80 chr8:62408858-62408938 1.47e-03 32_[+3(1.95e-05)]_40 chr14:100952983-10095306 2.53e-03 38_[+1(1.88e-05)]_34 chr19:34175264-34175344 9.51e-03 27_[+2(3.93e-05)]_45 chr2:29516856-29516936 3.18e-04 25_[+3(1.95e-05)]_7_[+1(1.88e-05)]_\ 32 chr12:3601510-3601590 5.80e-03 31_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 31 chr20:859545-859625 9.39e-04 28_[+2(1.98e-05)]_44 chr12:131011526-13101160 7.79e-04 26_[+3(1.95e-05)]_1_[+1(3.79e-05)]_\ 37 chr4:147565141-147565221 1.46e-02 29_[+2(7.85e-05)]_43 chr14:97406506-97406586 2.07e-02 43_[+1(1.88e-05)]_16_[+1(5.68e-05)]_\ 5 chr16:26328551-26328631 2.31e-02 80 chr6:12752097-12752177 1.25e-04 41_[+1(1.88e-05)]_31 chr1:94236356-94236436 1.59e-02 18_[+2(3.93e-05)]_54 chr19:34258928-34259008 1.19e-03 28_[+3(1.95e-05)]_1_[+1(3.79e-05)]_\ 35 chr2:27531441-27531521 1.93e-05 28_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 35 chr10:79088310-79088390 7.04e-03 38_[+1(3.79e-05)]_34 chr1:58926307-58926387 7.04e-03 35_[+3(4.87e-05)]_37 chr19:39714492-39714572 2.67e-04 26_[+2(6.54e-05)]_46 chr20:34973071-34973151 5.11e-04 33_[+2(6.54e-05)]_2_[+4(1.90e-05)]_\ 29 chr2:242006562-242006642 5.32e-04 29_[+3(1.95e-05)]_8_[+1(1.88e-05)]_\ 27 chr7:154106944-154107024 1.16e-02 41_[+3(8.17e-05)]_1_[+1(3.79e-05)]_\ 22 chr8:24770306-24770386 3.36e-03 80 chr16:750750-750830 1.67e-02 44_[+4(4.73e-05)]_28 chr10:16654405-16654485 1.46e-03 44_[+1(3.79e-05)]_28 chr8:69084597-69084677 3.54e-03 32_[+4(6.63e-05)]_40 chr16:25758639-25758719 4.67e-04 20_[+2(1.98e-05)]_9_[+4(1.90e-05)]_\ 35 chr15:74557541-74557621 1.31e-04 36_[+1(1.88e-05)]_36 chr1:210306106-210306186 1.03e-02 22_[+3(8.17e-05)]_1_[+1(6.93e-05)]_\ 41 chrX:106568016-106568096 2.27e-02 44_[+4(4.73e-05)]_28 chr1:183386046-183386126 1.02e-02 18_[+2(1.98e-05)]_54 chr11:133817321-13381740 9.02e-04 32_[+4(6.63e-05)]_40 chr16:83735300-83735380 1.63e-02 24_[+2(1.98e-05)]_4_[+2(1.98e-05)]_\ 36 chr3:42341626-42341706 3.03e-03 30_[+2(5.23e-05)]_42 chr1:1951123-1951203 1.31e-03 42_[+3(4.87e-05)]_7_[+1(1.88e-05)]_\ 15 chr7:105054636-105054716 3.17e-02 48_[+4(9.74e-05)]_24 chr19:13574280-13574360 5.44e-03 34_[+2(1.98e-05)]_38 chr20:61747924-61748004 4.49e-03 36_[+2(6.54e-05)]_2_[+4(4.73e-05)]_\ 26 chr12:118870080-11887016 2.13e-02 39_[+4(4.73e-05)]_33 chr5:174749086-174749166 1.67e-03 30_[+2(1.98e-05)]_42 chr16:9133229-9133309 1.79e-02 80 chr14:78996554-78996634 4.49e-03 35_[+2(1.98e-05)]_2_[+4(9.74e-05)]_\ 27 chrX:18165263-18165343 6.57e-03 40_[+2(3.93e-05)]_32 chr9:34413386-34413466 1.95e-03 42_[+1(1.88e-05)]_30 chr2:131513839-131513919 8.25e-02 35_[+1(1.88e-05)]_37 chr1:18246084-18246164 2.26e-04 33_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 29 chr1:210111107-210111187 3.47e-03 29_[+1(3.79e-05)]_43 chr13:93970948-93971028 1.94e-03 22_[+2(6.54e-05)]_7_[+4(6.63e-05)]_\ 35 chr5:139188309-139188389 2.49e-03 39_[+4(4.73e-05)]_33 chr10:132722546-13272262 2.13e-04 22_[+2(1.98e-05)]_2_[+4(6.63e-05)]_\ 40 chr8:10950087-10950167 1.43e-02 80 chr12:65220257-65220337 4.43e-03 25_[+2(1.98e-05)]_8_[+4(6.63e-05)]_\ 31 chr1:11533847-11533927 5.06e-03 31_[+3(8.17e-05)]_41 chr21:43396172-43396252 2.23e-04 24_[+3(8.17e-05)]_48 chr20:40283683-40283763 1.81e-03 31_[+3(1.95e-05)]_41 chr1:202626514-202626594 3.85e-03 25_[+2(3.93e-05)]_47 chr20:37314656-37314736 6.94e-04 23_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 40 chr18:55021279-55021359 1.73e-03 25_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 38 chr11:10400716-10400796 9.37e-04 20_[+2(1.98e-05)]_8_[+4(1.90e-05)]_\ 36 chr9:104299380-104299460 8.37e-04 35_[+3(1.95e-05)]_37 chr8:28595105-28595185 7.29e-04 35_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 28 chr5:133877561-133877641 4.47e-04 26_[+2(3.93e-05)]_46 chr15:77994990-77995070 3.38e-04 24_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 38 chr1:37486424-37486504 4.64e-03 48_[+1(1.88e-05)]_24 chr14:74892726-74892806 2.00e-03 38_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 24 chr1:7135550-7135630 7.04e-04 21_[+2(1.98e-05)]_2_[+4(6.63e-05)]_\ 41 chr5:170108324-170108404 1.10e-02 34_[+3(4.87e-05)]_38 chr2:119924803-119924883 2.26e-02 32_[+3(4.87e-05)]_40 chr12:119071040-11907112 2.21e-03 42_[+1(1.88e-05)]_30 chr17:45863220-45863300 8.63e-04 40_[+3(1.95e-05)]_32 chr5:63259080-63259160 8.81e-04 16_[+2(1.98e-05)]_56 chr5:16179027-16179107 2.55e-03 42_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 21 chr18:5197154-5197234 2.02e-03 24_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 38 chr17:33124872-33124952 1.59e-04 23_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 39 chr8:67089840-67089920 1.67e-03 40_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 23 chr2:73507188-73507268 1.61e-02 29_[+2(1.98e-05)]_43 chr8:35289931-35290011 1.10e-03 36_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 27 chr5:176231092-176231172 6.42e-05 24_[+1(5.68e-05)]_48 chr19:5404212-5404292 6.14e-03 24_[+3(4.87e-05)]_1_[+1(6.93e-05)]_\ 39 chr6:30279007-30279087 1.77e-04 21_[+2(3.93e-05)]_2_[+4(6.63e-05)]_\ 41 chr9:34494105-34494185 1.26e-03 31_[+2(1.98e-05)]_41 chr15:89962758-89962838 1.18e-03 39_[+1(1.88e-05)]_33 chr8:40686491-40686571 7.98e-03 25_[+1(3.79e-05)]_47 chr5:6328413-6328493 2.44e-03 18_[+2(5.23e-05)]_8_[+4(1.90e-05)]_\ 38 chr20:43405795-43405875 9.90e-03 28_[+2(1.98e-05)]_44 chr19:54406483-54406563 2.98e-03 33_[+3(1.95e-05)]_39 chr20:43408953-43409033 8.39e-04 42_[+1(1.88e-05)]_30 chr12:113229322-11322940 4.21e-03 33_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 30 chr20:62092876-62092956 8.00e-03 27_[+2(3.93e-05)]_45 chrX:48853508-48853588 1.23e-05 32_[+2(1.98e-05)]_40 chr17:64825802-64825882 9.92e-03 32_[+3(1.95e-05)]_40 chr7:135020679-135020759 1.50e-02 34_[+1(1.88e-05)]_38 chr5:132946811-132946891 5.88e-02 50_[+4(4.73e-05)]_22 chr12:95273502-95273582 3.57e-03 40_[+4(1.90e-05)]_32 chr14:75127731-75127811 1.70e-01 38_[+4(6.63e-05)]_34 chr3:38439019-38439099 7.86e-04 48_[+4(6.63e-05)]_24 chr14:58332221-58332301 3.12e-03 32_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 30 chr6:105391834-105391914 3.38e-02 80 chr11:119389638-11938971 7.88e-04 31_[+3(1.95e-05)]_41 chr14:77675187-77675267 3.74e-06 33_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 30 chr11:116476408-11647648 3.66e-03 30_[+1(1.88e-05)]_42 chr9:140033689-140033769 2.03e-04 23_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 39 chr2:98963102-98963182 1.17e-03 37_[+3(4.87e-05)]_8_[+1(1.88e-05)]_\ 19 chr7:104192710-104192790 3.54e-04 33_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 29 chr16:25513017-25513097 1.05e-02 41_[+3(8.17e-05)]_31 chr12:108797877-10879795 5.39e-02 80 chr12:113503168-11350324 8.32e-03 50_[+4(6.63e-05)]_22 chr10:85984583-85984663 4.72e-05 32_[+3(1.95e-05)]_1_[+1(6.93e-05)]_\ 31 chr7:8482568-8482648 3.00e-03 36_[+2(1.98e-05)]_36 chr12:119083184-11908326 3.79e-03 34_[+3(8.17e-05)]_1_[+1(3.79e-05)]_\ 29 chr12:58154322-58154402 1.04e-02 38_[+3(1.95e-05)]_34 chr14:93380561-93380641 2.56e-03 27_[+2(3.93e-05)]_2_[+4(6.63e-05)]_\ 35 chr22:45371586-45371666 3.96e-05 22_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 41 chr1:50774668-50774748 7.81e-04 35_[+2(6.54e-05)]_37 chr20:61713793-61713873 1.71e-03 15_[+2(1.98e-05)]_8_[+4(1.90e-05)]_\ 41 chr10:72075756-72075836 5.20e-04 29_[+3(8.17e-05)]_7_[+4(9.74e-05)]_\ 28 chr5:141263099-141263179 1.89e-04 35_[+3(1.95e-05)]_8_[+1(3.79e-05)]_\ 21 chr5:52912930-52913010 5.87e-07 8_[+5(3.14e-05)]_11_[+3(1.95e-05)]_\ 7_[+1(1.88e-05)]_30 chr20:17207370-17207450 4.80e-03 44_[+1(1.88e-05)]_28 chr19:38945849-38945929 7.78e-03 30_[+3(8.17e-05)]_1_[+1(3.79e-05)]_\ 33 chr12:103218386-10321846 5.02e-03 36_[+3(4.87e-05)]_36 chr11:1422974-1423054 3.40e-04 34_[+3(1.95e-05)]_38 chr22:42690535-42690615 1.11e-04 37_[+3(1.95e-05)]_35 chr16:68478116-68478196 1.51e-03 42_[+4(1.90e-05)]_30 chr8:55914031-55914111 1.94e-04 27_[+3(8.17e-05)]_1_[+1(1.88e-05)]_\ 36 chr1:110761519-110761599 2.32e-04 32_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 31 chr12:113918047-11391812 2.05e-04 24_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 39 chr22:50309379-50309459 4.85e-03 19_[+2(1.98e-05)]_2_[+4(9.74e-05)]_\ 43 chr12:119950850-11995093 1.22e-04 23_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 39 chr2:215275811-215275891 2.83e-04 27_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 36 chr8:28514893-28514973 6.89e-03 31_[+4(1.90e-05)]_41 chr8:26372685-26372765 1.41e-01 80 chr4:8677243-8677323 1.28e-03 45_[+1(1.88e-05)]_27 chr1:30448091-30448171 1.76e-02 42_[+1(6.93e-05)]_30 chr10:73341937-73342017 1.85e-03 28_[+3(1.95e-05)]_44 chr4:158141513-158141593 1.04e-03 38_[+1(1.88e-05)]_34 chr20:61701345-61701425 3.06e-04 47_[+1(1.88e-05)]_25 chr7:37092428-37092508 1.69e-03 27_[+2(1.98e-05)]_45 chr16:25276093-25276173 9.09e-05 33_[+1(1.88e-05)]_39 chr6:116918137-116918217 1.47e-03 40_[+3(1.95e-05)]_1_[+1(6.93e-05)]_\ 23 chr22:50129123-50129203 1.29e-03 30_[+3(4.87e-05)]_1_[+1(3.79e-05)]_\ 33 chr15:79087541-79087621 1.99e-02 32_[+3(1.95e-05)]_40 chr12:53135314-53135394 5.47e-03 30_[+2(1.98e-05)]_2_[+4(9.74e-05)]_\ 32 chr19:15649750-15649830 1.65e-03 38_[+4(1.90e-05)]_34 chr2:219826674-219826754 6.12e-03 36_[+1(1.88e-05)]_36 chr22:37859099-37859179 4.12e-03 36_[+1(1.88e-05)]_36 chr22:48563212-48563292 7.58e-04 36_[+3(8.17e-05)]_1_[+1(1.88e-05)]_\ 27 chr6:159688358-159688438 2.81e-04 34_[+2(3.93e-05)]_2_[+4(4.73e-05)]_\ 28 chr1:18582955-18583035 9.03e-04 35_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 28 chr11:117467960-11746804 9.07e-04 29_[+2(3.93e-05)]_2_[+4(4.73e-05)]_\ 33 chr16:23186111-23186191 2.21e-04 40_[+3(4.87e-05)]_32 chr20:57717398-57717478 3.19e-03 44_[+1(3.79e-05)]_28 chr7:152759145-152759225 2.45e-04 23_[+2(5.23e-05)]_7_[+4(1.90e-05)]_\ 34 chr20:56623321-56623401 3.07e-03 35_[+3(1.95e-05)]_37 chr19:7676572-7676652 6.20e-04 26_[+2(1.98e-05)]_11_[+4(4.73e-05)]_\ 27 chr9:124818943-124819023 8.67e-03 28_[+3(8.17e-05)]_44 chr17:10778787-10778867 2.80e-04 24_[+3(8.17e-05)]_48 chr22:39220673-39220753 1.52e-03 27_[+1(1.88e-05)]_45 chr15:68113420-68113500 4.92e-04 34_[+3(4.87e-05)]_6_[+1(1.88e-05)]_\ 24 chr7:63635501-63635581 7.55e-04 21_[+1(1.88e-05)]_29_[+1(5.68e-05)]_\ 14 chr5:13867077-13867157 1.36e-03 26_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 36 chr8:142577198-142577278 3.81e-04 34_[+2(1.98e-05)]_2_[+4(6.63e-05)]_\ 28 chr2:59061690-59061770 1.68e-04 36_[+2(3.93e-05)]_2_[+4(4.73e-05)]_\ 26 chr1:37432023-37432103 2.43e-04 14_[+4(9.74e-05)]_12_[+2(1.98e-05)]_\ 2_[+4(1.90e-05)]_28 chr6:90269379-90269459 2.59e-06 5_[+5(5.48e-06)]_19_[+3(1.95e-05)]_\ 7_[+1(1.88e-05)]_25 chr18:75269147-75269227 1.18e-02 19_[+2(3.93e-05)]_53 chr5:92948380-92948460 2.69e-04 7_[+3(1.95e-05)]_65 chr12:132905875-13290595 6.77e-04 51_[+2(1.98e-05)]_21 chr19:36466679-36466759 7.55e-04 32_[+2(6.54e-05)]_2_[+4(6.63e-05)]_\ 30 chr12:67587649-67587729 1.30e-04 22_[+2(3.93e-05)]_2_[+4(1.90e-05)]_\ 40 chr19:10120207-10120287 3.01e-03 48_[+1(1.88e-05)]_24 chr15:70268880-70268960 4.49e-03 80 chr5:175170825-175170905 8.60e-03 39_[+1(6.93e-05)]_33 chr9:139093728-139093808 9.01e-04 29_[+2(1.98e-05)]_7_[+4(4.73e-05)]_\ 28 chr3:51963611-51963691 2.44e-04 26_[+2(5.23e-05)]_7_[+4(6.63e-05)]_\ 31 chr7:77455790-77455870 3.20e-02 42_[+3(8.17e-05)]_30 chr4:170745027-170745107 2.73e-04 56_[+2(5.23e-05)]_16 chr1:93521938-93522018 6.28e-03 80 chr8:50824223-50824303 1.22e-03 32_[+2(1.98e-05)]_9_[+4(4.73e-05)]_\ 23 chr5:123882502-123882582 4.04e-04 1_[+2(1.98e-05)]_27_[+2(1.98e-05)]_\ 36 chr2:171670833-171670913 6.39e-03 80 chr2:36655028-36655108 5.41e-05 19_[+2(1.98e-05)]_8_[+4(6.63e-05)]_\ 37 chr7:131955444-131955524 9.85e-05 47_[+1(1.88e-05)]_25 chr2:226264846-226264926 4.38e-02 80 chr11:129835293-12983537 3.27e-06 37_[+3(1.95e-05)]_7_[+1(1.88e-05)]_\ 20 chr9:136474571-136474651 3.99e-03 41_[+1(1.88e-05)]_31 chr7:32467444-32467524 6.07e-04 43_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 19 chr3:11006422-11006502 3.61e-05 33_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 29 chr2:11810052-11810132 5.80e-03 28_[+2(1.98e-05)]_8_[+4(4.73e-05)]_\ 28 chr20:31797699-31797779 1.48e-03 25_[+2(1.98e-05)]_2_[+4(6.63e-05)]_\ 37 chr9:137990390-137990470 1.92e-03 31_[+1(1.88e-05)]_3_[+4(4.73e-05)]_\ 30 chr11:17756618-17756698 9.03e-04 47_[+2(1.98e-05)]_25 chr22:46242999-46243079 2.82e-04 28_[+3(1.95e-05)]_44 chr8:56015523-56015603 2.33e-03 36_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 26 chr19:51198549-51198629 3.14e-03 28_[+2(1.98e-05)]_2_[+4(1.90e-05)]_\ 34 chr3:123936527-123936607 1.56e-04 34_[+2(3.93e-05)]_2_[+4(4.73e-05)]_\ 28 chr17:72187084-72187164 1.91e-04 42_[+1(1.88e-05)]_30 chr2:73110635-73110715 2.38e-03 26_[+3(1.95e-05)]_46 chr11:33522567-33522647 2.66e-03 16_[+3(4.87e-05)]_1_[+1(1.88e-05)]_\ 47 chr9:19720534-19720614 6.86e-05 33_[+5(5.48e-06)]_6_[+3(1.95e-05)]_\ 25 chr10:71327751-71327831 4.79e-02 21_[+2(1.98e-05)]_51 chr8:142902167-142902247 1.18e-03 40_[+1(1.88e-05)]_32 chr1:34966192-34966272 1.56e-04 38_[+3(1.95e-05)]_1_[+1(1.88e-05)]_\ 25 chr2:166094963-166095043 1.31e-04 31_[+2(1.98e-05)]_2_[+4(4.73e-05)]_\ 31 chr19:3307486-3307566 4.55e-04 17_[+2(1.98e-05)]_9_[+4(1.90e-05)]_\ 38 chr2:133246843-133246923 4.92e-04 29_[+3(4.87e-05)]_43 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************