******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/PYGO2.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr16:1142376-1142456 1.0000 80 chr19:50997887-50997967 1.0000 80 chr2:99198984-99199064 1.0000 80 chr8:145607572-145607652 1.0000 80 chr19:17396711-17396791 1.0000 80 chr5:1332972-1333052 1.0000 80 chr19:18243258-18243338 1.0000 80 chr19:47815772-47815852 1.0000 80 chr16:66988233-66988313 1.0000 80 chr20:48334306-48334386 1.0000 80 chr6:30539963-30540043 1.0000 80 chr19:18243967-18244047 1.0000 80 chr19:50998523-50998603 1.0000 80 chr20:48912048-48912128 1.0000 80 chr17:46325110-46325190 1.0000 80 chr16:70325011-70325091 1.0000 80 chr19:1808485-1808565 1.0000 80 chr1:12636583-12636663 1.0000 80 chr15:78170650-78170730 1.0000 80 chr5:137972563-137972643 1.0000 80 chr20:48674302-48674382 1.0000 80 chr10:112619671-11261975 1.0000 80 chr22:29075272-29075352 1.0000 80 chr17:27088315-27088395 1.0000 80 chr19:50042578-50042658 1.0000 80 chr19:4796928-4797008 1.0000 80 chr19:615664-615744 1.0000 80 chr11:63868336-63868416 1.0000 80 chr1:11332748-11332828 1.0000 80 chr11:67314603-67314683 1.0000 80 chr14:91885187-91885267 1.0000 80 chr3:46890195-46890275 1.0000 80 chr21:45245178-45245258 1.0000 80 chrX:223676-223756 1.0000 80 chr16:2076607-2076687 1.0000 80 chr12:123446399-12344647 1.0000 80 chr16:22286434-22286514 1.0000 80 chr5:204729-204809 1.0000 80 chr2:101223488-101223568 1.0000 80 chr19:17503845-17503925 1.0000 80 chr16:69756317-69756397 1.0000 80 chr9:117424441-117424521 1.0000 80 chr1:40916349-40916429 1.0000 80 chr9:127075074-127075154 1.0000 80 chr19:3455555-3455635 1.0000 80 chr1:25282458-25282538 1.0000 80 chr19:943888-943968 1.0000 80 chrX:135282765-135282845 1.0000 80 chr17:55332662-55332742 1.0000 80 chr16:24864559-24864639 1.0000 80 chr19:47530247-47530327 1.0000 80 chr19:1515117-1515197 1.0000 80 chr19:18241814-18241894 1.0000 80 chr19:752949-753029 1.0000 80 chr5:173109513-173109593 1.0000 80 chr14:102204554-10220463 1.0000 80 chr19:11313689-11313769 1.0000 80 chr6:42688718-42688798 1.0000 80 chr19:954439-954519 1.0000 80 chr19:11359710-11359790 1.0000 80 chr4:88033493-88033573 1.0000 80 chr17:75082738-75082818 1.0000 80 chr19:45504130-45504210 1.0000 80 chr19:2739672-2739752 1.0000 80 chr1:68215142-68215222 1.0000 80 chr18:74535303-74535383 1.0000 80 chr3:13033226-13033306 1.0000 80 chr12:120376047-12037612 1.0000 80 chr16:4936358-4936438 1.0000 80 chr11:78074378-78074458 1.0000 80 chr3:14380555-14380635 1.0000 80 chr19:844776-844856 1.0000 80 chr19:35805130-35805210 1.0000 80 chr8:142071427-142071507 1.0000 80 chr6:28836552-28836632 1.0000 80 chr11:46293165-46293245 1.0000 80 chr19:11362533-11362613 1.0000 80 chr1:198619793-198619873 1.0000 80 chr2:65874518-65874598 1.0000 80 chr10:6623930-6624010 1.0000 80 chr19:18809214-18809294 1.0000 80 chr18:74535512-74535592 1.0000 80 chr19:850352-850432 1.0000 80 chr19:18209561-18209641 1.0000 80 chr19:3402982-3403062 1.0000 80 chr1:46983101-46983181 1.0000 80 chr2:32514376-32514456 1.0000 80 chr3:101659736-101659816 1.0000 80 chr19:3371633-3371713 1.0000 80 chr19:45206225-45206305 1.0000 80 chr15:52432267-52432347 1.0000 80 chr22:17001860-17001940 1.0000 80 chr1:2480679-2480759 1.0000 80 chr19:702602-702682 1.0000 80 chr19:17692428-17692508 1.0000 80 chr8:22842826-22842906 1.0000 80 chr8:91226949-91227029 1.0000 80 chr12:111851474-11185155 1.0000 80 chr19:3719282-3719362 1.0000 80 chr16:66639560-66639640 1.0000 80 chr1:206137726-206137806 1.0000 80 chr10:74702970-74703050 1.0000 80 chr19:50999821-50999901 1.0000 80 chr19:54868182-54868262 1.0000 80 chr16:1143116-1143196 1.0000 80 chr17:2852731-2852811 1.0000 80 chr19:10198132-10198212 1.0000 80 chr3:129291123-129291203 1.0000 80 chr5:1333617-1333697 1.0000 80 chr2:131136382-131136462 1.0000 80 chr5:134445375-134445455 1.0000 80 chr19:14351425-14351505 1.0000 80 chr1:205235907-205235987 1.0000 80 chr19:3710683-3710763 1.0000 80 chr19:3398260-3398340 1.0000 80 chr1:193073411-193073491 1.0000 80 chr1:53606281-53606361 1.0000 80 chr9:139623139-139623219 1.0000 80 chr16:81442199-81442279 1.0000 80 chr8:128980086-128980166 1.0000 80 chr10:1466041-1466121 1.0000 80 chr19:18412305-18412385 1.0000 80 chr19:844030-844110 1.0000 80 chr2:39370226-39370306 1.0000 80 chr5:176131573-176131653 1.0000 80 chr1:145738758-145738838 1.0000 80 chr17:43432177-43432257 1.0000 80 chr12:111706921-11170700 1.0000 80 chr17:624122-624202 1.0000 80 chr19:29999244-29999324 1.0000 80 chr1:233803845-233803925 1.0000 80 chr19:17355522-17355602 1.0000 80 chr4:103605965-103606045 1.0000 80 chr4:111146830-111146910 1.0000 80 chr12:109358644-10935872 1.0000 80 chr21:38218564-38218644 1.0000 80 chr7:2720622-2720702 1.0000 80 chr6:157097845-157097925 1.0000 80 chr4:77869108-77869188 1.0000 80 chr1:231112949-231113029 1.0000 80 chr19:30363145-30363225 1.0000 80 chrX:47441236-47441316 1.0000 80 chrX:223133-223213 1.0000 80 chr4:96211808-96211888 1.0000 80 chr19:18285077-18285157 1.0000 80 chr4:96212009-96212089 1.0000 80 chr20:48926028-48926108 1.0000 80 chr10:70824663-70824743 1.0000 80 chr1:15365206-15365286 1.0000 80 chr12:124978901-12497898 1.0000 80 chr19:18809648-18809728 1.0000 80 chr19:4570562-4570642 1.0000 80 chr5:175273495-175273575 1.0000 80 chr6:35887597-35887677 1.0000 80 chr10:115280868-11528094 1.0000 80 chr3:14398088-14398168 1.0000 80 chr7:101387277-101387357 1.0000 80 chr12:113772495-11377257 1.0000 80 chr22:20244566-20244646 1.0000 80 chr7:98923992-98924072 1.0000 80 chr21:45118660-45118740 1.0000 80 chr2:28566218-28566298 1.0000 80 chr11:69527209-69527289 1.0000 80 chr20:34427834-34427914 1.0000 80 chr8:62674094-62674174 1.0000 80 chr16:58427011-58427091 1.0000 80 chr19:17357656-17357736 1.0000 80 chr16:26657157-26657237 1.0000 80 chr10:99497643-99497723 1.0000 80 chr1:180600664-180600744 1.0000 80 chr19:10547344-10547424 1.0000 80 chr1:15364990-15365070 1.0000 80 chr20:31351900-31351980 1.0000 80 chr1:234534850-234534930 1.0000 80 chr17:73348592-73348672 1.0000 80 chr20:621757-621837 1.0000 80 chr15:78026194-78026274 1.0000 80 chr9:35489449-35489529 1.0000 80 chr19:514435-514515 1.0000 80 chr20:33291262-33291342 1.0000 80 chr3:57993773-57993853 1.0000 80 chr19:4212355-4212435 1.0000 80 chr16:89641730-89641810 1.0000 80 chr19:18362681-18362761 1.0000 80 chr12:111707125-11170720 1.0000 80 chr16:28081751-28081831 1.0000 80 chr16:85353471-85353551 1.0000 80 chrX:117670718-117670798 1.0000 80 chr12:123436911-12343699 1.0000 80 chr12:124965081-12496516 1.0000 80 chr16:89884097-89884177 1.0000 80 chr16:89253217-89253297 1.0000 80 chr11:75044591-75044671 1.0000 80 chr2:10077532-10077612 1.0000 80 chr12:108625374-10862545 1.0000 80 chr16:1444521-1444601 1.0000 80 chr1:160492849-160492929 1.0000 80 chr14:77278020-77278100 1.0000 80 chrX:154843788-154843868 1.0000 80 chr19:7679939-7680019 1.0000 80 chr19:513609-513689 1.0000 80 chr9:127019848-127019928 1.0000 80 chr15:34330463-34330543 1.0000 80 chr10:76998271-76998351 1.0000 80 chr19:17795235-17795315 1.0000 80 chr17:48861454-48861534 1.0000 80 chr16:81667753-81667833 1.0000 80 chr19:960762-960842 1.0000 80 chr16:11318570-11318650 1.0000 80 chr10:1466241-1466321 1.0000 80 chrX:48366918-48366998 1.0000 80 chr16:66981317-66981397 1.0000 80 chr20:32320583-32320663 1.0000 80 chr19:1848935-1849015 1.0000 80 chr1:246351481-246351561 1.0000 80 chr2:20046542-20046622 1.0000 80 chr20:44486726-44486806 1.0000 80 chr4:174044250-174044330 1.0000 80 chr14:23127144-23127224 1.0000 80 chr16:88536390-88536470 1.0000 80 chr6:157009449-157009529 1.0000 80 chr1:155109769-155109849 1.0000 80 chr12:108986477-10898655 1.0000 80 chr19:11337485-11337565 1.0000 80 chr7:134521654-134521734 1.0000 80 chrX:44344205-44344285 1.0000 80 chr10:70884756-70884836 1.0000 80 chr1:2476046-2476126 1.0000 80 chr22:37640563-37640643 1.0000 80 chr12:104971363-10497144 1.0000 80 chr19:764546-764626 1.0000 80 chr2:98363686-98363766 1.0000 80 chr20:50202543-50202623 1.0000 80 chr8:62504230-62504310 1.0000 80 chr20:55760985-55761065 1.0000 80 chr12:54610674-54610754 1.0000 80 chr20:31352102-31352182 1.0000 80 chr1:205680868-205680948 1.0000 80 chr16:4819298-4819378 1.0000 80 chr16:2021621-2021701 1.0000 80 chr6:119121184-119121264 1.0000 80 chr19:18809436-18809516 1.0000 80 chrX:47438995-47439075 1.0000 80 chr17:54987283-54987363 1.0000 80 chr3:47608818-47608898 1.0000 80 chr7:75521302-75521382 1.0000 80 chr1:31288491-31288571 1.0000 80 chr1:87258165-87258245 1.0000 80 chr1:22227799-22227879 1.0000 80 chr6:139897916-139897996 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_PYGO2/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/PYGO2.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.268 C 0.24 G 0.237 T 0.255 Background letter frequencies (from file dataset with add-one prior applied): A 0.268 C 0.24 G 0.237 T 0.255 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CWGTAKGC MEME-1 width = 8 sites = 197 llr = 1196 E-value = 5.5e-071 ******************************************************************************** -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :5::713: pos.-specific C 9::21::7 probability G ::a:237: matrix T 15:7:6:3 bits 2.1 1.9 * 1.7 * * 1.5 * * Relative 1.2 * * Entropy 1.0 * * ** (8.8 bits) 0.8 **** ** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGTATGC consensus A C GAT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:54987283-54987363 15 1.44e-05 tatgcactta ctgtatgc caggcactgt chrX:154843788-154843868 22 1.44e-05 tgagtgccta ctgtatgc caggcactgt chr19:10547344-10547424 23 1.44e-05 gttattatta ctgtatgc ctgaaaggat chr3:14398088-14398168 56 1.44e-05 taagctccaa ctgtatgc ctcatattgc chr1:53606281-53606361 68 1.44e-05 taagcaccta ctgtatgc tgggc chr19:3710683-3710763 33 1.44e-05 tgtgcactta ctgtatgc gcgagtgtgg chr19:47530247-47530327 21 1.44e-05 TAGGCACCTA CTGTATGC ACTAGCCCAT chr17:55332662-55332742 67 1.44e-05 taagcaccta ctgtatgc cagaac chr19:943888-943968 42 1.44e-05 ggggcacctg ctgtatgc cagcccgacc chr1:12636583-12636663 57 2.95e-05 CACTTCTGTC CAGTATGC ATTTATTGAG chr8:62504230-62504310 66 5.69e-05 aaactgtaaa cagtaggc accgaga chr7:98923992-98924072 26 5.69e-05 TCCCTGCATA CAGTAGGC GCCCATAGGA chr19:18809648-18809728 39 5.69e-05 ACTGTGTACT CAGTAGGC GCAGTGTGTG chr19:30363145-30363225 51 5.69e-05 AATGTGCATA CAGTAGGC GCCCAAGCGG chr21:38218564-38218644 39 5.69e-05 AGAAAATaca cagtaggc actcaataaa chr19:10198132-10198212 32 5.69e-05 AGCCTGCAAA CAGTAGGC GCTCATTATG chr19:850352-850432 3 5.69e-05 GA CAGTAGGC GCTTACTAAG chr18:74535303-74535383 17 5.69e-05 GTAGTGCATA CAGTAGGC GCCATTGTGA chr9:117424441-117424521 42 5.69e-05 atgcggtaca cagtaggc gtttaataTC chr20:48334306-48334386 33 5.69e-05 gctcagcagc cagtaggc gctgaataat chr19:50997887-50997967 18 5.69e-05 CGGCAGCATA CAGTAGGC ACTCAATACA chr6:139897916-139897996 18 8.84e-05 aaGCGATTGC CTGTATAC GCAGAAACAT chr19:11337485-11337565 55 8.84e-05 tgagcacttg ctgtatac tctgactgtg chr14:77278020-77278100 67 8.84e-05 tgagtgccta ctgtatac caagca chr1:160492849-160492929 1 8.84e-05 . CTGTATAC AGACGATTTA chr16:28081751-28081831 42 8.84e-05 TTGGCACCGA CTGTATAC CATGCGCTTT chr1:15364990-15365070 4 8.84e-05 CTG CTGTATAC AGGCATGAAC chr16:26657157-26657237 63 8.84e-05 tgagcacctg ctgtatgt ggtccaggca chr6:35887597-35887677 69 8.84e-05 CAGACACCGA CTGTATAC ACAG chr1:15365206-15365286 56 8.84e-05 TGTGCACCTG CTGTATAC AGACATGAAT chr4:77869108-77869188 70 8.84e-05 tgagcgccta ctgtatgt ttg chr12:109358644-10935872 67 8.84e-05 tgagcacctg ctgtatac cagaca chr19:17355522-17355602 54 8.84e-05 GTAGCGCCGA CTGTATAC ACAATCCCAG chr2:39370226-39370306 42 8.84e-05 gtttggacaa ctgtatac accaccaatg chr19:18412305-18412385 60 8.84e-05 tgagcacttg ctgtatac caggccagtc chr2:131136382-131136462 27 8.84e-05 AATGTGCCTA CTGTATAC ACACCATCCC chr5:1333617-1333697 45 8.84e-05 GGGGGGACTA CTGTATAC ACACCGGATG chr19:45206225-45206305 63 8.84e-05 tgggcactta ctgtatac caggcattgt chr19:3402982-3403062 41 8.84e-05 tttgcacctg ctgtatac cagatcctat chr19:752949-753029 43 8.84e-05 taggcgcctg ctgtatac cagactctgg chrX:135282765-135282845 20 8.84e-05 tgagtgattc ctgtatac aaagccctgg chr22:29075272-29075352 64 8.84e-05 TAGGCGCTGA CTGTATAC CGACACCCC chr19:18243967-18244047 28 8.84e-05 gtggcacctg ctgtatac ttgggcctgt chr12:111706921-11170700 17 1.35e-04 tcaaGGTTCA CAGTATAC AGCAGGTGCT chr17:43432177-43432257 33 1.35e-04 taagcaccta ctgcatgc cacggcactg chr19:17692428-17692508 6 1.35e-04 GCCTA CTGCATGC CAGCAACAGG chr6:28836552-28836632 16 1.35e-04 gtcacatcta cagtatac gtaggagcac chr16:66988233-66988313 64 1.35e-04 TGAACACCGG CTGCATGC CTGTCTCTG chr19:47815772-47815852 36 1.35e-04 TTATAAATGG CAGTATGT TTTGTACAGT chr1:180600664-180600744 12 1.49e-04 AATTCAGAAG CAGCATGC ACTTTTTGGC chr12:113772495-11377257 30 1.49e-04 ACCTGAAGAT CAGCATGC GTCTCGTCTC chr1:233803845-233803925 32 1.49e-04 CTGTCCTTTT CAGCATGC ACACAGTTGC chr3:47608818-47608898 16 1.91e-04 CAAGTGGTAA CTGTGTGC ATGTTACTGC chr22:37640563-37640643 38 1.91e-04 tgagtgcctg ctgtgtgc caggcacagt chr20:44486726-44486806 34 1.91e-04 tgagcacctg ctgtgtgc cTTGTGAAGA chr1:193073411-193073491 69 1.91e-04 ggagcgccta ctgtgtgc taag chr19:18209561-18209641 29 1.91e-04 ggagcgcctg ctgtgtgc ctggctctgg chr3:13033226-13033306 19 1.91e-04 ATGGCTGAAA CTGTGTGC AGGAAAGCTG chr19:954439-954519 55 1.91e-04 taggcaactg ctgtgtgc ccgattttgg chr19:615664-615744 37 1.91e-04 ACGGCAAGCA CTGTGTGC GCACCCGCGG chr20:50202543-50202623 30 2.48e-04 gcctagcatc cagtaggt gctcaataaa chr16:88536390-88536470 19 2.48e-04 ttggggcata cagtaggt gctccataaa chr10:1466241-1466321 35 2.48e-04 ACTATGTATG CAGTAGGT CCACTGTGTA chr19:17795235-17795315 18 2.48e-04 gcctggtata cagtaggt gctcaattaa chr16:89253217-89253297 66 2.48e-04 ACCCAGCGCA CAGTAGgt gctctgc chr12:123436911-12343699 18 2.48e-04 gctgggcata cagtaggt gctcaataaa chr10:115280868-11528094 17 2.48e-04 gcttgtaata cagtaggt gctcaataaa chr19:29999244-29999324 3 2.48e-04 ca cagtaggt actcaataag chr10:1466041-1466121 35 2.48e-04 ACTATGTATG CAGTAGGT CCACTATGTA chr16:81442199-81442279 18 2.48e-04 gcctggtatt cagtaggt gctcaataaa chr19:3719282-3719362 6 2.48e-04 GTATA CAGTAGGT GTTCAGTAAG chr19:3371633-3371713 8 2.48e-04 tggtata cagtaggt gccaaataag chr2:65874518-65874598 33 2.48e-04 agctagcata cagtaggt gttcaataaa chr19:11313689-11313769 62 2.48e-04 aatgggtata cagtaggt accccataaa chr5:173109513-173109593 2 2.48e-04 a cagtaggt gctcaataaa chr16:2076607-2076687 4 2.48e-04 ata cagtaggt atccaataaa chr6:30539963-30540043 42 2.48e-04 CAACTAACCC CAGTAGGT ACACAGTAAC chr10:76998271-76998351 19 2.61e-04 cctgagcata cagcaggc gctaaataaa chr10:99497643-99497723 23 2.61e-04 ttcactcatt cagcaggc atttgttaag chr8:62674094-62674174 29 2.61e-04 ttgctttata cagcaggc actcaacctt chr19:18809214-18809294 2 2.61e-04 T CAGCAGGC ACACACAACA chr21:45245178-45245258 32 2.61e-04 AGCGTGCACA CAGCAGGC ACTCCATGTG chr14:91885187-91885267 57 2.61e-04 GGCAAGTATA CAGCAGGC ACTAAATGGC chr1:11332748-11332828 24 2.61e-04 TGTATgcaca cagcaggc gctcaataaa chr16:70325011-70325091 43 2.61e-04 acttagtata cagcaggc accaatctaa chr1:2476046-2476126 73 2.73e-04 GTCTGCCCAG CTGTGGGC chr20:32320583-32320663 16 2.73e-04 AGGCTCAAAA CTGTGGGC TTTGGAGACA chr2:10077532-10077612 55 3.18e-04 TGAGCACCTA CTGTATAT TCAGATGAGG chr19:18243258-18243338 66 3.18e-04 TGAGCACCTG CTGTATAT TAGTGCA chr19:513609-513689 48 3.82e-04 tgagcaccta ctgcatac tggccctgca chr5:175273495-175273575 36 3.82e-04 TGAACACCAA CTGCATAC CATCCCCAGA chr4:96211808-96211888 23 3.82e-04 gttaggcata cagtaagc atataataaa chr19:3398260-3398340 73 3.82e-04 tgagcgccag ctgcatac chr1:198619793-198619873 61 3.82e-04 agctaaggga ctgcatgt gacagtgtaa chr5:204729-204809 41 3.82e-04 TAGGTAACAA CTGCATAC AACACACACA chr2:99198984-99199064 7 3.82e-04 CACCTA CTGCATAC GCCAGACACA chr1:46983101-46983181 65 4.13e-04 ctcatgcact cagcatac acagagca chrX:44344205-44344285 58 4.70e-04 tgagaacctg ctgtgtac atgtcaagat chr1:155109769-155109849 28 4.70e-04 gaagctccta ctgtgtgt gccaagcaca chr15:34330463-34330543 36 4.70e-04 tatgcgccta ctgtgtac taggcattgc chr11:75044591-75044671 31 4.70e-04 tgagcaccta ctgtgtac caggcactgt chr19:514435-514515 45 4.70e-04 tgagcaccta ctgtgtac cagccctgca chr15:78026194-78026274 64 4.70e-04 TGCAAAATGA CTGTGTGT TTTCAcatc chr21:45118660-45118740 47 4.70e-04 accggtattg ctgtagat tacgcctatg chr9:139623139-139623219 59 4.70e-04 GACTAGCGCC CTGTCTGC GCTGTGTCCT chr5:134445375-134445455 32 4.70e-04 GCCCTTCTTT CTGTAGAT GGGGCTGTAG chr3:129291123-129291203 56 4.70e-04 GCCAGAAGAT CTGTGTGT GTGCAATCAA chr8:91226949-91227029 60 4.70e-04 tgagcgtcca ctgtgtac tctggggagc chr19:702602-702682 36 4.70e-04 tgagcaccta ctgtgtac agacagtgtt chr11:46293165-46293245 34 4.70e-04 TCTTCCTACT CTGTCTGC TCCCAGGGAA chr3:14380555-14380635 37 4.70e-04 tgagcaccta ctgtgtac caggctctgt chr1:25282458-25282538 26 4.70e-04 TCCAGGGAAA CTGTCTGC AGATTGGGAC chr9:127075074-127075154 72 4.70e-04 tgagcgcctg ctgtgtac t chr19:50042578-50042658 73 4.70e-04 tgagcacctg ctgtgtgt chr20:48674302-48674382 8 4.70e-04 gcaccaa ctgtgtac cccactctgg chr19:18809436-18809516 54 5.69e-04 AGCACATGCA CAGTGTGT ACTAAGCAGG chr14:102204554-10220463 57 5.69e-04 tgagcaccaa cagtgtac cagggaccat chr12:123446399-12344647 40 5.69e-04 CAACCATATA CAGTGTGT GCTTAATAAA chr7:75521302-75521382 19 6.10e-04 gTGATgcaaa cagcaggt gctcaataaa chr16:1444521-1444601 8 6.10e-04 tggtatg cagcaggt gcctaataag chr19:50999821-50999901 39 6.10e-04 TGGGTGCATA CAGCAGGT ACTCCATAAA chr19:1515117-1515197 39 6.10e-04 GGAAGGTATA CAGCAGGT GCTGCATCCT chr19:4796928-4797008 32 6.10e-04 GGGTTTGAAT CAGCAGGT GCTCTCAAAG chrX:47438995-47439075 41 6.99e-04 CTCATGTAAA CAGTCGGC AACACTCTGT chr17:624122-624202 46 6.99e-04 AGGGAGTATA CAGTCGGC TGAGGGAGTT chr16:1143116-1143196 36 6.99e-04 TCACAGCACA CAGTCGGC GCTCAATCAA chr22:17001860-17001940 5 6.99e-04 TATA CAGTCGGC GCCTAATGCA chr16:1142376-1142456 20 6.99e-04 TCCCTGCACA CAGTCGGC GCTCAATCAA chr9:35489449-35489529 13 7.86e-04 CCCCCTCTGG CTGTAAAC AGCAGGAGTC chr1:234534850-234534930 30 7.86e-04 TCTGACACCA CTGTAAAC AGTCATCGCA chr7:2720622-2720702 48 7.86e-04 TGAGCACCGA CTGTTTGC TTCCCTGCCC chr19:1808485-1808565 17 7.86e-04 tgagcacctg ctgaatgc aaggccTCAG chr5:176131573-176131653 41 8.96e-04 GAAATAcata cagtaagt gctcaataca chr8:128980086-128980166 45 8.96e-04 TCTTTCTGGT CAGTTTGC Ctccactgac chr19:844776-844856 30 8.96e-04 aggtggtgct cagtaagt gcttggggtt chr1:68215142-68215222 40 8.96e-04 CTTTCCCCCA CTGCATAT ATAGTAACAC chr11:67314603-67314683 15 8.96e-04 gtctggaaca cagtaagt gctcaataaa chr12:124978901-12497898 33 9.28e-04 ACATGGTATA CAGCAAGC ACCCCATAAA chr1:231112949-231113029 38 9.28e-04 acctggcata cagcaagc actcaatata chr6:42688718-42688798 58 9.28e-04 AAGTAAACAC cagcaagc atttaatgag chr17:48861454-48861534 67 1.04e-03 CTCTCCAGGC CTGTCTGT TTTCTT chr19:17357656-17357736 58 1.04e-03 taagcaccct ttgtatgc gaggcccggg chrX:223133-223213 35 1.04e-03 TAGGCACCTG TTGTATGC ACAGTCAGAA chr16:4936358-4936438 3 1.04e-03 AT CTGTCTGT AGTATGTACC chrX:223676-223756 18 1.04e-03 TAGGCAACTG TTGTATGC AGTCAGAAAT chr11:69527209-69527289 72 1.21e-03 GAGTCACATT CAGTCTGT T chr4:103605965-103606045 61 1.21e-03 ctacacagaa cagtgagc aatttaaaac chr19:2739672-2739752 28 1.21e-03 CTGGATACCT CAGTCTGT ACAGTGAAGG chr19:960762-960842 10 1.58e-03 GCAGGGCCG CTGTTTAC TGTGCacact chr16:58427011-58427091 16 1.58e-03 TTGGCTCCAG CTGAATAC TTAAGAATTA chr16:69756317-69756397 41 1.58e-03 ccaccgcgcc cagccGGC ATCTGCAACT chr2:101223488-101223568 57 1.58e-03 TATGCGTTTA CTGTATTC ATCTTCGTGC chr8:145607572-145607652 30 1.58e-03 AGAGCTCCTG CTGTATTC AGCGAGTATT chr1:31288491-31288571 43 1.77e-03 aaaaagtgct cagtaaat gcagatatta chrX:117670718-117670798 69 1.77e-03 ataaatgCAT CTTTATGC TGAA chr15:52432267-52432347 30 1.77e-03 AATGGTGACA CTGCAAGT CCCAACATCC chr2:32514376-32514456 41 1.77e-03 ATAAGCCGAC CAGGATGT GACTCATAGA chr19:3455555-3455635 36 1.77e-03 ttaatagatg CAGGATAC TGCTTAGGAT chr12:124965081-12496516 7 1.83e-03 CCACAG CAGCAAAC CACAGGTGCT chr20:48926028-48926108 59 1.83e-03 TTCAGTACAt cagcaaac atttattgag chr4:96212009-96212089 28 1.83e-03 GAATGATCTG CAGCAAGT CAGCAGAAAG chr1:205235907-205235987 20 1.83e-03 cgcactatgc cagcttgc cagacgtcat chr1:87258165-87258245 58 2.05e-03 gcttctccaa ttgtatac tttaaccatg chr17:2852731-2852811 33 2.05e-03 TGAGCATTAA CTGAGTGC CTGTTGTGTG chr16:2021621-2021701 12 2.37e-03 gctttgcaca cagaaggt gctcaataca chr19:764546-764626 56 2.37e-03 TCGCAGTACC CAGGGTGC TTATTAAGCA chrX:48366918-48366998 12 2.37e-03 TGGCCGGTCC CAGGAGGT GGGAGGGTTG chr19:4212355-4212435 53 2.37e-03 GGCTATGAAG CAGGAGGT GGGGCAGGGA chr20:34427834-34427914 39 2.37e-03 attgagtacc tagtatgt gcaaagtact chr22:20244566-20244646 1 2.37e-03 . caggaggt gctccataaa chr4:88033493-88033573 28 2.37e-03 CATGAGTATA CAGTTGAC ATAAGCGAAG chr1:40916349-40916429 21 2.37e-03 GCGCCTCCAG CTGCTGGC CAAGGAGACA chr19:17503845-17503925 33 2.37e-03 CAGAGGTATA CAGTAGTC ACTCCATAAA chr19:1848935-1849015 9 2.47e-03 CTGGTATA CAGCTGGC TCTCAAGAAA chr19:18285077-18285157 29 2.47e-03 ACAAGTTCAG CAGCTGGC CAAGGGCCGC chr1:145738758-145738838 46 2.47e-03 GGAAAGTATA CAGCTGGC CCTTGCGGAG chr8:22842826-22842906 60 2.47e-03 tgtgctcaaa cagcgtat ctttaactta chr9:127019848-127019928 12 2.72e-03 GTGCCAATTT CAGTATGA CTAGGGCTGT chr20:33291262-33291342 17 2.72e-03 GGTGGTGCAA TAGTAGGT GCCTAATAAA chr4:111146830-111146910 27 2.72e-03 GCATCATTTT TAGTAGAC AGAAAGCACT chr19:844030-844110 44 2.72e-03 GGGGCACGGC CAGAGGGC TCCGGGACCC chr11:78074378-78074458 59 2.72e-03 gcctggtata tagtaggt gctcaataaa chr16:66981317-66981397 51 2.89e-03 CCACTACATT CTGAAAGC GTTTATTGTG chr12:108986477-10898655 25 3.13e-03 actttcatga ctttatgt gtcagccact chr10:70884756-70884836 44 3.52e-03 TGGTATTTAG CTGGGTGT CGGCAGTCTC chr3:101659736-101659816 28 3.52e-03 AATGTAAGTG CTGAGTAC AGAATGGTGC chr19:11362533-11362613 18 3.52e-03 gtttccttac ctgggtgt aatggctgcc chr17:75082738-75082818 59 3.52e-03 TAGTAGACGC CTGTAGTT TTCGCCTGTC chr16:22286434-22286514 26 3.52e-03 TGGGGAAGCA CATCATGC ATGGGGCGGG chr10:112619671-11261975 66 3.52e-03 ACATACATTT TTGTAAGC ATTCCTT chr20:55760985-55761065 62 3.94e-03 gggcagagct ttgcatac cctaagtact chr19:18362681-18362761 54 3.94e-03 gcatgaaGAG CTTTAGAC AATGGAGCAG chr6:157097845-157097925 52 3.94e-03 GGGGCGGGTG cagtcagt cataagcatt chr17:27088315-27088395 70 3.94e-03 aatgagtACA CAGACTGC CCA chr11:63868336-63868416 25 4.32e-03 GGAAGGTGGA CTGAGGAC ATACAAAGCT chr5:1332972-1333052 50 4.32e-03 tgagggacta ctgTATAA CACCAGATGA chr19:14351425-14351505 73 5.32e-03 gaccagcact cattaagc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:54987283-54987363 1.4e-05 14_[+1]_58 chrX:154843788-154843868 1.4e-05 21_[+1]_51 chr19:10547344-10547424 1.4e-05 22_[+1]_50 chr3:14398088-14398168 1.4e-05 55_[+1]_17 chr1:53606281-53606361 1.4e-05 67_[+1]_5 chr19:3710683-3710763 1.4e-05 32_[+1]_40 chr19:47530247-47530327 1.4e-05 20_[+1]_52 chr17:55332662-55332742 1.4e-05 66_[+1]_6 chr19:943888-943968 1.4e-05 41_[+1]_31 chr1:12636583-12636663 2.9e-05 56_[+1]_16 chr8:62504230-62504310 5.7e-05 65_[+1]_7 chr7:98923992-98924072 5.7e-05 25_[+1]_47 chr19:18809648-18809728 5.7e-05 38_[+1]_34 chr19:30363145-30363225 5.7e-05 50_[+1]_22 chr21:38218564-38218644 5.7e-05 38_[+1]_34 chr19:10198132-10198212 5.7e-05 31_[+1]_41 chr19:850352-850432 5.7e-05 2_[+1]_70 chr18:74535303-74535383 5.7e-05 16_[+1]_56 chr9:117424441-117424521 5.7e-05 41_[+1]_31 chr20:48334306-48334386 5.7e-05 32_[+1]_40 chr19:50997887-50997967 5.7e-05 17_[+1]_55 chr6:139897916-139897996 8.8e-05 17_[+1]_55 chr19:11337485-11337565 8.8e-05 54_[+1]_18 chr14:77278020-77278100 8.8e-05 66_[+1]_6 chr1:160492849-160492929 8.8e-05 [+1]_72 chr16:28081751-28081831 8.8e-05 41_[+1]_31 chr1:15364990-15365070 8.8e-05 3_[+1]_69 chr16:26657157-26657237 8.8e-05 62_[+1]_10 chr6:35887597-35887677 8.8e-05 68_[+1]_4 chr1:15365206-15365286 8.8e-05 55_[+1]_17 chr4:77869108-77869188 8.8e-05 69_[+1]_3 chr12:109358644-10935872 8.8e-05 66_[+1]_6 chr19:17355522-17355602 8.8e-05 53_[+1]_19 chr2:39370226-39370306 8.8e-05 41_[+1]_31 chr19:18412305-18412385 8.8e-05 59_[+1]_13 chr2:131136382-131136462 8.8e-05 26_[+1]_46 chr5:1333617-1333697 8.8e-05 44_[+1]_28 chr19:45206225-45206305 8.8e-05 62_[+1]_10 chr19:3402982-3403062 8.8e-05 40_[+1]_32 chr19:752949-753029 8.8e-05 42_[+1]_30 chrX:135282765-135282845 8.8e-05 19_[+1]_53 chr22:29075272-29075352 8.8e-05 63_[+1]_9 chr19:18243967-18244047 8.8e-05 27_[+1]_45 chr12:111706921-11170700 0.00014 16_[+1]_56 chr17:43432177-43432257 0.00014 32_[+1]_40 chr19:17692428-17692508 0.00014 5_[+1]_67 chr6:28836552-28836632 0.00014 15_[+1]_57 chr16:66988233-66988313 0.00014 63_[+1]_9 chr19:47815772-47815852 0.00014 35_[+1]_37 chr1:180600664-180600744 0.00015 11_[+1]_61 chr12:113772495-11377257 0.00015 29_[+1]_43 chr1:233803845-233803925 0.00015 31_[+1]_41 chr3:47608818-47608898 0.00019 15_[+1]_57 chr22:37640563-37640643 0.00019 37_[+1]_35 chr20:44486726-44486806 0.00019 33_[+1]_39 chr1:193073411-193073491 0.00019 68_[+1]_4 chr19:18209561-18209641 0.00019 28_[+1]_44 chr3:13033226-13033306 0.00019 18_[+1]_54 chr19:954439-954519 0.00019 54_[+1]_18 chr19:615664-615744 0.00019 36_[+1]_36 chr20:50202543-50202623 0.00025 29_[+1]_43 chr16:88536390-88536470 0.00025 18_[+1]_54 chr10:1466241-1466321 0.00025 34_[+1]_38 chr19:17795235-17795315 0.00025 17_[+1]_55 chr16:89253217-89253297 0.00025 65_[+1]_7 chr12:123436911-12343699 0.00025 17_[+1]_55 chr10:115280868-11528094 0.00025 16_[+1]_56 chr19:29999244-29999324 0.00025 2_[+1]_70 chr10:1466041-1466121 0.00025 34_[+1]_38 chr16:81442199-81442279 0.00025 17_[+1]_55 chr19:3719282-3719362 0.00025 5_[+1]_67 chr19:3371633-3371713 0.00025 7_[+1]_65 chr2:65874518-65874598 0.00025 32_[+1]_40 chr19:11313689-11313769 0.00025 61_[+1]_11 chr5:173109513-173109593 0.00025 1_[+1]_71 chr16:2076607-2076687 0.00025 3_[+1]_69 chr6:30539963-30540043 0.00025 41_[+1]_31 chr10:76998271-76998351 0.00026 18_[+1]_54 chr10:99497643-99497723 0.00026 22_[+1]_50 chr8:62674094-62674174 0.00026 28_[+1]_44 chr19:18809214-18809294 0.00026 1_[+1]_71 chr21:45245178-45245258 0.00026 31_[+1]_41 chr14:91885187-91885267 0.00026 56_[+1]_16 chr1:11332748-11332828 0.00026 23_[+1]_49 chr16:70325011-70325091 0.00026 42_[+1]_30 chr1:2476046-2476126 0.00027 72_[+1] chr20:32320583-32320663 0.00027 15_[+1]_57 chr2:10077532-10077612 0.00032 54_[+1]_18 chr19:18243258-18243338 0.00032 65_[+1]_7 chr19:513609-513689 0.00038 47_[+1]_25 chr5:175273495-175273575 0.00038 35_[+1]_37 chr4:96211808-96211888 0.00038 22_[+1]_50 chr19:3398260-3398340 0.00038 72_[+1] chr1:198619793-198619873 0.00038 60_[+1]_12 chr5:204729-204809 0.00038 40_[+1]_32 chr2:99198984-99199064 0.00038 6_[+1]_66 chr1:46983101-46983181 0.00041 64_[+1]_8 chrX:44344205-44344285 0.00047 57_[+1]_15 chr1:155109769-155109849 0.00047 27_[+1]_45 chr15:34330463-34330543 0.00047 35_[+1]_37 chr11:75044591-75044671 0.00047 30_[+1]_42 chr19:514435-514515 0.00047 44_[+1]_28 chr15:78026194-78026274 0.00047 63_[+1]_9 chr21:45118660-45118740 0.00047 46_[+1]_26 chr9:139623139-139623219 0.00047 58_[+1]_14 chr5:134445375-134445455 0.00047 31_[+1]_41 chr3:129291123-129291203 0.00047 55_[+1]_17 chr8:91226949-91227029 0.00047 59_[+1]_13 chr19:702602-702682 0.00047 35_[+1]_37 chr11:46293165-46293245 0.00047 33_[+1]_39 chr3:14380555-14380635 0.00047 36_[+1]_36 chr1:25282458-25282538 0.00047 25_[+1]_47 chr9:127075074-127075154 0.00047 71_[+1]_1 chr19:50042578-50042658 0.00047 72_[+1] chr20:48674302-48674382 0.00047 7_[+1]_65 chr19:18809436-18809516 0.00057 53_[+1]_19 chr14:102204554-10220463 0.00057 56_[+1]_16 chr12:123446399-12344647 0.00057 39_[+1]_33 chr7:75521302-75521382 0.00061 18_[+1]_54 chr16:1444521-1444601 0.00061 7_[+1]_65 chr19:50999821-50999901 0.00061 38_[+1]_34 chr19:1515117-1515197 0.00061 38_[+1]_34 chr19:4796928-4797008 0.00061 31_[+1]_41 chrX:47438995-47439075 0.0007 40_[+1]_32 chr17:624122-624202 0.0007 45_[+1]_27 chr16:1143116-1143196 0.0007 35_[+1]_37 chr22:17001860-17001940 0.0007 4_[+1]_68 chr16:1142376-1142456 0.0007 19_[+1]_53 chr9:35489449-35489529 0.00079 12_[+1]_60 chr1:234534850-234534930 0.00079 29_[+1]_43 chr7:2720622-2720702 0.00079 47_[+1]_25 chr19:1808485-1808565 0.00079 16_[+1]_56 chr5:176131573-176131653 0.0009 40_[+1]_32 chr8:128980086-128980166 0.0009 44_[+1]_28 chr19:844776-844856 0.0009 29_[+1]_43 chr1:68215142-68215222 0.0009 39_[+1]_33 chr11:67314603-67314683 0.0009 14_[+1]_58 chr12:124978901-12497898 0.00093 32_[+1]_40 chr1:231112949-231113029 0.00093 37_[+1]_35 chr6:42688718-42688798 0.00093 57_[+1]_15 chr17:48861454-48861534 0.001 66_[+1]_6 chr19:17357656-17357736 0.001 57_[+1]_15 chrX:223133-223213 0.001 34_[+1]_38 chr16:4936358-4936438 0.001 2_[+1]_70 chrX:223676-223756 0.001 17_[+1]_55 chr11:69527209-69527289 0.0012 71_[+1]_1 chr4:103605965-103606045 0.0012 60_[+1]_12 chr19:2739672-2739752 0.0012 27_[+1]_45 chr19:960762-960842 0.0016 9_[+1]_63 chr16:58427011-58427091 0.0016 15_[+1]_57 chr16:69756317-69756397 0.0016 40_[+1]_32 chr2:101223488-101223568 0.0016 56_[+1]_16 chr8:145607572-145607652 0.0016 29_[+1]_43 chr1:31288491-31288571 0.0018 42_[+1]_30 chrX:117670718-117670798 0.0018 68_[+1]_4 chr15:52432267-52432347 0.0018 29_[+1]_43 chr2:32514376-32514456 0.0018 40_[+1]_32 chr19:3455555-3455635 0.0018 35_[+1]_37 chr12:124965081-12496516 0.0018 6_[+1]_66 chr20:48926028-48926108 0.0018 58_[+1]_14 chr4:96212009-96212089 0.0018 27_[+1]_45 chr1:205235907-205235987 0.0018 19_[+1]_53 chr1:87258165-87258245 0.002 57_[+1]_15 chr17:2852731-2852811 0.002 32_[+1]_40 chr16:2021621-2021701 0.0024 11_[+1]_61 chr19:764546-764626 0.0024 55_[+1]_17 chrX:48366918-48366998 0.0024 11_[+1]_61 chr19:4212355-4212435 0.0024 52_[+1]_20 chr20:34427834-34427914 0.0024 38_[+1]_34 chr22:20244566-20244646 0.0024 [+1]_72 chr4:88033493-88033573 0.0024 27_[+1]_45 chr1:40916349-40916429 0.0024 20_[+1]_52 chr19:17503845-17503925 0.0024 32_[+1]_40 chr19:1848935-1849015 0.0025 8_[+1]_64 chr19:18285077-18285157 0.0025 28_[+1]_44 chr1:145738758-145738838 0.0025 45_[+1]_27 chr8:22842826-22842906 0.0025 59_[+1]_13 chr9:127019848-127019928 0.0027 11_[+1]_61 chr20:33291262-33291342 0.0027 16_[+1]_56 chr4:111146830-111146910 0.0027 26_[+1]_46 chr19:844030-844110 0.0027 43_[+1]_29 chr11:78074378-78074458 0.0027 58_[+1]_14 chr16:66981317-66981397 0.0029 50_[+1]_22 chr12:108986477-10898655 0.0031 24_[+1]_48 chr10:70884756-70884836 0.0035 43_[+1]_29 chr3:101659736-101659816 0.0035 27_[+1]_45 chr19:11362533-11362613 0.0035 17_[+1]_55 chr17:75082738-75082818 0.0035 58_[+1]_14 chr16:22286434-22286514 0.0035 25_[+1]_47 chr10:112619671-11261975 0.0035 65_[+1]_7 chr20:55760985-55761065 0.0039 61_[+1]_11 chr19:18362681-18362761 0.0039 53_[+1]_19 chr6:157097845-157097925 0.0039 51_[+1]_21 chr17:27088315-27088395 0.0039 69_[+1]_3 chr11:63868336-63868416 0.0043 24_[+1]_48 chr5:1332972-1333052 0.0043 49_[+1]_23 chr19:14351425-14351505 0.0053 72_[+1] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CWGTAKGC width=8 seqs=197 chr17:54987283-54987363 ( 15) CTGTATGC 1 chrX:154843788-154843868 ( 22) CTGTATGC 1 chr19:10547344-10547424 ( 23) CTGTATGC 1 chr3:14398088-14398168 ( 56) CTGTATGC 1 chr1:53606281-53606361 ( 68) CTGTATGC 1 chr19:3710683-3710763 ( 33) CTGTATGC 1 chr19:47530247-47530327 ( 21) CTGTATGC 1 chr17:55332662-55332742 ( 67) CTGTATGC 1 chr19:943888-943968 ( 42) CTGTATGC 1 chr1:12636583-12636663 ( 57) CAGTATGC 1 chr8:62504230-62504310 ( 66) CAGTAGGC 1 chr7:98923992-98924072 ( 26) CAGTAGGC 1 chr19:18809648-18809728 ( 39) CAGTAGGC 1 chr19:30363145-30363225 ( 51) CAGTAGGC 1 chr21:38218564-38218644 ( 39) CAGTAGGC 1 chr19:10198132-10198212 ( 32) CAGTAGGC 1 chr19:850352-850432 ( 3) CAGTAGGC 1 chr18:74535303-74535383 ( 17) CAGTAGGC 1 chr9:117424441-117424521 ( 42) CAGTAGGC 1 chr20:48334306-48334386 ( 33) CAGTAGGC 1 chr19:50997887-50997967 ( 18) CAGTAGGC 1 chr6:139897916-139897996 ( 18) CTGTATAC 1 chr19:11337485-11337565 ( 55) CTGTATAC 1 chr14:77278020-77278100 ( 67) CTGTATAC 1 chr1:160492849-160492929 ( 1) CTGTATAC 1 chr16:28081751-28081831 ( 42) CTGTATAC 1 chr1:15364990-15365070 ( 4) CTGTATAC 1 chr16:26657157-26657237 ( 63) CTGTATGT 1 chr6:35887597-35887677 ( 69) CTGTATAC 1 chr1:15365206-15365286 ( 56) CTGTATAC 1 chr4:77869108-77869188 ( 70) CTGTATGT 1 chr12:109358644-10935872 ( 67) CTGTATAC 1 chr19:17355522-17355602 ( 54) CTGTATAC 1 chr2:39370226-39370306 ( 42) CTGTATAC 1 chr19:18412305-18412385 ( 60) CTGTATAC 1 chr2:131136382-131136462 ( 27) CTGTATAC 1 chr5:1333617-1333697 ( 45) CTGTATAC 1 chr19:45206225-45206305 ( 63) CTGTATAC 1 chr19:3402982-3403062 ( 41) CTGTATAC 1 chr19:752949-753029 ( 43) CTGTATAC 1 chrX:135282765-135282845 ( 20) CTGTATAC 1 chr22:29075272-29075352 ( 64) CTGTATAC 1 chr19:18243967-18244047 ( 28) CTGTATAC 1 chr12:111706921-11170700 ( 17) CAGTATAC 1 chr17:43432177-43432257 ( 33) CTGCATGC 1 chr19:17692428-17692508 ( 6) CTGCATGC 1 chr6:28836552-28836632 ( 16) CAGTATAC 1 chr16:66988233-66988313 ( 64) CTGCATGC 1 chr19:47815772-47815852 ( 36) CAGTATGT 1 chr1:180600664-180600744 ( 12) CAGCATGC 1 chr12:113772495-11377257 ( 30) CAGCATGC 1 chr1:233803845-233803925 ( 32) CAGCATGC 1 chr3:47608818-47608898 ( 16) CTGTGTGC 1 chr22:37640563-37640643 ( 38) CTGTGTGC 1 chr20:44486726-44486806 ( 34) CTGTGTGC 1 chr1:193073411-193073491 ( 69) CTGTGTGC 1 chr19:18209561-18209641 ( 29) CTGTGTGC 1 chr3:13033226-13033306 ( 19) CTGTGTGC 1 chr19:954439-954519 ( 55) CTGTGTGC 1 chr19:615664-615744 ( 37) CTGTGTGC 1 chr20:50202543-50202623 ( 30) CAGTAGGT 1 chr16:88536390-88536470 ( 19) CAGTAGGT 1 chr10:1466241-1466321 ( 35) CAGTAGGT 1 chr19:17795235-17795315 ( 18) CAGTAGGT 1 chr16:89253217-89253297 ( 66) CAGTAGGT 1 chr12:123436911-12343699 ( 18) CAGTAGGT 1 chr10:115280868-11528094 ( 17) CAGTAGGT 1 chr19:29999244-29999324 ( 3) CAGTAGGT 1 chr10:1466041-1466121 ( 35) CAGTAGGT 1 chr16:81442199-81442279 ( 18) CAGTAGGT 1 chr19:3719282-3719362 ( 6) CAGTAGGT 1 chr19:3371633-3371713 ( 8) CAGTAGGT 1 chr2:65874518-65874598 ( 33) CAGTAGGT 1 chr19:11313689-11313769 ( 62) CAGTAGGT 1 chr5:173109513-173109593 ( 2) CAGTAGGT 1 chr16:2076607-2076687 ( 4) CAGTAGGT 1 chr6:30539963-30540043 ( 42) CAGTAGGT 1 chr10:76998271-76998351 ( 19) CAGCAGGC 1 chr10:99497643-99497723 ( 23) CAGCAGGC 1 chr8:62674094-62674174 ( 29) CAGCAGGC 1 chr19:18809214-18809294 ( 2) CAGCAGGC 1 chr21:45245178-45245258 ( 32) CAGCAGGC 1 chr14:91885187-91885267 ( 57) CAGCAGGC 1 chr1:11332748-11332828 ( 24) CAGCAGGC 1 chr16:70325011-70325091 ( 43) CAGCAGGC 1 chr1:2476046-2476126 ( 73) CTGTGGGC 1 chr20:32320583-32320663 ( 16) CTGTGGGC 1 chr2:10077532-10077612 ( 55) CTGTATAT 1 chr19:18243258-18243338 ( 66) CTGTATAT 1 chr19:513609-513689 ( 48) CTGCATAC 1 chr5:175273495-175273575 ( 36) CTGCATAC 1 chr4:96211808-96211888 ( 23) CAGTAAGC 1 chr19:3398260-3398340 ( 73) CTGCATAC 1 chr1:198619793-198619873 ( 61) CTGCATGT 1 chr5:204729-204809 ( 41) CTGCATAC 1 chr2:99198984-99199064 ( 7) CTGCATAC 1 chr1:46983101-46983181 ( 65) CAGCATAC 1 chrX:44344205-44344285 ( 58) CTGTGTAC 1 chr1:155109769-155109849 ( 28) CTGTGTGT 1 chr15:34330463-34330543 ( 36) CTGTGTAC 1 chr11:75044591-75044671 ( 31) CTGTGTAC 1 chr19:514435-514515 ( 45) CTGTGTAC 1 chr15:78026194-78026274 ( 64) CTGTGTGT 1 chr21:45118660-45118740 ( 47) CTGTAGAT 1 chr9:139623139-139623219 ( 59) CTGTCTGC 1 chr5:134445375-134445455 ( 32) CTGTAGAT 1 chr3:129291123-129291203 ( 56) CTGTGTGT 1 chr8:91226949-91227029 ( 60) CTGTGTAC 1 chr19:702602-702682 ( 36) CTGTGTAC 1 chr11:46293165-46293245 ( 34) CTGTCTGC 1 chr3:14380555-14380635 ( 37) CTGTGTAC 1 chr1:25282458-25282538 ( 26) CTGTCTGC 1 chr9:127075074-127075154 ( 72) CTGTGTAC 1 chr19:50042578-50042658 ( 73) CTGTGTGT 1 chr20:48674302-48674382 ( 8) CTGTGTAC 1 chr19:18809436-18809516 ( 54) CAGTGTGT 1 chr14:102204554-10220463 ( 57) CAGTGTAC 1 chr12:123446399-12344647 ( 40) CAGTGTGT 1 chr7:75521302-75521382 ( 19) CAGCAGGT 1 chr16:1444521-1444601 ( 8) CAGCAGGT 1 chr19:50999821-50999901 ( 39) CAGCAGGT 1 chr19:1515117-1515197 ( 39) CAGCAGGT 1 chr19:4796928-4797008 ( 32) CAGCAGGT 1 chrX:47438995-47439075 ( 41) CAGTCGGC 1 chr17:624122-624202 ( 46) CAGTCGGC 1 chr16:1143116-1143196 ( 36) CAGTCGGC 1 chr22:17001860-17001940 ( 5) CAGTCGGC 1 chr16:1142376-1142456 ( 20) CAGTCGGC 1 chr9:35489449-35489529 ( 13) CTGTAAAC 1 chr1:234534850-234534930 ( 30) CTGTAAAC 1 chr7:2720622-2720702 ( 48) CTGTTTGC 1 chr19:1808485-1808565 ( 17) CTGAATGC 1 chr5:176131573-176131653 ( 41) CAGTAAGT 1 chr8:128980086-128980166 ( 45) CAGTTTGC 1 chr19:844776-844856 ( 30) CAGTAAGT 1 chr1:68215142-68215222 ( 40) CTGCATAT 1 chr11:67314603-67314683 ( 15) CAGTAAGT 1 chr12:124978901-12497898 ( 33) CAGCAAGC 1 chr1:231112949-231113029 ( 38) CAGCAAGC 1 chr6:42688718-42688798 ( 58) CAGCAAGC 1 chr17:48861454-48861534 ( 67) CTGTCTGT 1 chr19:17357656-17357736 ( 58) TTGTATGC 1 chrX:223133-223213 ( 35) TTGTATGC 1 chr16:4936358-4936438 ( 3) CTGTCTGT 1 chrX:223676-223756 ( 18) TTGTATGC 1 chr11:69527209-69527289 ( 72) CAGTCTGT 1 chr4:103605965-103606045 ( 61) CAGTGAGC 1 chr19:2739672-2739752 ( 28) CAGTCTGT 1 chr19:960762-960842 ( 10) CTGTTTAC 1 chr16:58427011-58427091 ( 16) CTGAATAC 1 chr16:69756317-69756397 ( 41) CAGCCGGC 1 chr2:101223488-101223568 ( 57) CTGTATTC 1 chr8:145607572-145607652 ( 30) CTGTATTC 1 chr1:31288491-31288571 ( 43) CAGTAAAT 1 chrX:117670718-117670798 ( 69) CTTTATGC 1 chr15:52432267-52432347 ( 30) CTGCAAGT 1 chr2:32514376-32514456 ( 41) CAGGATGT 1 chr19:3455555-3455635 ( 36) CAGGATAC 1 chr12:124965081-12496516 ( 7) CAGCAAAC 1 chr20:48926028-48926108 ( 59) CAGCAAAC 1 chr4:96212009-96212089 ( 28) CAGCAAGT 1 chr1:205235907-205235987 ( 20) CAGCTTGC 1 chr1:87258165-87258245 ( 58) TTGTATAC 1 chr17:2852731-2852811 ( 33) CTGAGTGC 1 chr16:2021621-2021701 ( 12) CAGAAGGT 1 chr19:764546-764626 ( 56) CAGGGTGC 1 chrX:48366918-48366998 ( 12) CAGGAGGT 1 chr19:4212355-4212435 ( 53) CAGGAGGT 1 chr20:34427834-34427914 ( 39) TAGTATGT 1 chr22:20244566-20244646 ( 1) CAGGAGGT 1 chr4:88033493-88033573 ( 28) CAGTTGAC 1 chr1:40916349-40916429 ( 21) CTGCTGGC 1 chr19:17503845-17503925 ( 33) CAGTAGTC 1 chr19:1848935-1849015 ( 9) CAGCTGGC 1 chr19:18285077-18285157 ( 29) CAGCTGGC 1 chr1:145738758-145738838 ( 46) CAGCTGGC 1 chr8:22842826-22842906 ( 60) CAGCGTAT 1 chr9:127019848-127019928 ( 12) CAGTATGA 1 chr20:33291262-33291342 ( 17) TAGTAGGT 1 chr4:111146830-111146910 ( 27) TAGTAGAC 1 chr19:844030-844110 ( 44) CAGAGGGC 1 chr11:78074378-78074458 ( 59) TAGTAGGT 1 chr16:66981317-66981397 ( 51) CTGAAAGC 1 chr12:108986477-10898655 ( 25) CTTTATGT 1 chr10:70884756-70884836 ( 44) CTGGGTGT 1 chr3:101659736-101659816 ( 28) CTGAGTAC 1 chr19:11362533-11362613 ( 18) CTGGGTGT 1 chr17:75082738-75082818 ( 59) CTGTAGTT 1 chr16:22286434-22286514 ( 26) CATCATGC 1 chr10:112619671-11261975 ( 66) TTGTAAGC 1 chr20:55760985-55761065 ( 62) TTGCATAC 1 chr19:18362681-18362761 ( 54) CTTTAGAC 1 chr6:157097845-157097925 ( 52) CAGTCAGT 1 chr17:27088315-27088395 ( 70) CAGACTGC 1 chr11:63868336-63868416 ( 25) CTGAGGAC 1 chr5:1332972-1333052 ( 50) CTGTATAA 1 chr19:14351425-14351505 ( 73) CATTAAGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.99664 E= 5.5e-071 -1427 199 -1427 -233 88 -1427 -1427 99 -1427 -1427 204 -333 -255 -14 -254 145 139 -165 -41 -248 -147 -1427 54 113 18 -1427 151 -365 -472 150 -1427 28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 197 E= 5.5e-071 0.000000 0.949239 0.000000 0.050761 0.492386 0.000000 0.000000 0.507614 0.000000 0.000000 0.974619 0.025381 0.045685 0.218274 0.040609 0.695431 0.700508 0.076142 0.177665 0.045685 0.096447 0.000000 0.345178 0.558376 0.304569 0.000000 0.675127 0.020305 0.010152 0.680203 0.000000 0.309645 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGTAKGC MEME-1 regular expression -------------------------------------------------------------------------------- C[TA]G[TC]A[TG][GA][CT] -------------------------------------------------------------------------------- Time 4.81 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAGCACC MEME-2 width = 8 sites = 65 llr = 551 E-value = 6.8e-039 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :28::9:: pos.-specific C ::::9:a8 probability G :82a:1:: matrix T a:1:1::1 bits 2.1 * 1.9 * * * 1.7 * * * 1.5 ** ** * Relative 1.2 ** ***** Entropy 1.0 ******** (12.2 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGAGCACC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:2476046-2476126 21 1.42e-05 CCCTCAGCCC TGAGCACC TCCAAGTGTG chr20:44486726-44486806 24 1.42e-05 aggcactcat tgagcacc tgctgtgtgc chr20:32320583-32320663 42 1.42e-05 CAGCAAACAC TGAGCACC TCCATGTGTG chr19:513609-513689 38 1.42e-05 CCAGCAttac tgagcacc tactgcatac chr2:10077532-10077612 45 1.42e-05 TAGCACGTAT TGAGCACC TACTGTATAT chr11:75044591-75044671 21 1.42e-05 CAGcatgtat tgagcacc tactgtgtac chr19:514435-514515 3 1.42e-05 AC TGAGCACC TATTGCATTC chr1:180600664-180600744 65 1.42e-05 aagcacttat tgagcacc tagagtgt chr16:26657157-26657237 53 1.42e-05 aggcatttat tgagcacc tgctgtatgt chr10:70824663-70824743 67 1.42e-05 atgcatttat tgagcacc tactga chr20:48926028-48926108 73 1.42e-05 aaacatttat tgagcacc chr7:2720622-2720702 38 1.42e-05 TCCAGGACGC TGAGCACC GACTGTTTGC chr12:109358644-10935872 57 1.42e-05 aagcatgtat tgagcacc tgctgtatac chr19:702602-702682 26 1.42e-05 gagcatttat tgagcacc tactgtgtac chr3:14380555-14380635 27 1.42e-05 aagcatttat tgagcacc tactgtgtac chr14:102204554-10220463 47 1.42e-05 gagcaatcat tgagcacc aacagtgtac chr1:25282458-25282538 69 1.42e-05 aagcatttcc tgagcacc tact chr19:50042578-50042658 25 1.42e-05 caacatttat tgagcacc tactctatac chr5:137972563-137972643 48 1.42e-05 cagcatttat tgagcacc tctatgtgca chr1:12636583-12636663 71 1.42e-05 ATGCATTTAT TGAGCACC TT chr19:1808485-1808565 7 1.42e-05 agttac tgagcacc tgctgaatgc chr19:18243258-18243338 56 1.42e-05 GTGCATGTCT TGAGCACC TGCTGTATAT chr19:17396711-17396791 25 1.42e-05 GAGCAATTAT TGAGCACC AACTTTGAAC chr19:960762-960842 31 2.68e-05 GCacacttat tgggcacc aacggtatac chr19:45504130-45504210 19 2.68e-05 aaacatttat tgggcacc tacggtgttc chr12:54610674-54610754 27 3.94e-05 aagcatttat tgagcgcc tactatatgt chr4:77869108-77869188 60 3.94e-05 caacacttat tgagcgcc tactgtatgt chr8:128980086-128980166 69 3.94e-05 tgacatttat tgagcgcc tgta chr19:3398260-3398340 63 3.94e-05 GCGCacttat tgagcgcc agctgcatac chr9:127075074-127075154 62 3.94e-05 gagcatgcat tgagcgcc tgctgtgtac chr19:11337485-11337565 45 7.06e-05 ATccatttat tgagcact tgctgtatac chr10:99497643-99497723 37 7.06e-05 aggcatttgt taagcacc cactgtgtac chr19:17357656-17357736 48 7.06e-05 cagcatttat taagcacc ctttgtatgc chr17:43432177-43432257 23 7.06e-05 aagcatttat taagcacc tactgcatgc chr19:18412305-18412385 50 7.06e-05 Aagcatttat tgagcact tgctgtatac chr1:53606281-53606361 58 7.06e-05 taacacgtag taagcacc tactgtatgc chr17:55332662-55332742 57 7.06e-05 ccgcatttat taagcacc tactgtatgc chr16:70325011-70325091 28 7.06e-05 taccatttat tgagcact tagtatacag chr20:34427834-34427914 31 8.57e-05 aaacatttat tgagtacc tagtatgtgc chr6:157097845-157097925 73 8.57e-05 aagcatttat tgagtacc chr6:42688718-42688798 72 8.57e-05 aagcatttaa tgagtacc t chr16:66981317-66981397 65 9.92e-05 AAGCGTTTAT TGTGCACC AGCTGCAT chr1:15364990-15365070 49 9.92e-05 AGACGTTTAT TGTGCACC TACTGTATAC chr1:15365206-15365286 46 9.92e-05 AGATGTTTAT TGTGCACC TGCTGTATAC chr5:175273495-175273575 26 1.26e-04 GGACATTTAT TGAACACC AACTGCATAC chr19:3371633-3371713 67 1.26e-04 GTAATTGCAT TGAACACC CCAGAG chr16:66988233-66988313 54 1.26e-04 AAGCATTTAT TGAACACC GGCTGCATGC chr7:134521654-134521734 68 1.70e-04 CTGCAATGAT TAGGCACC ATTTT chr2:20046542-20046622 24 1.70e-04 TCCACCAATC TGAGCACA GCTTTGGCTG chr21:45118660-45118740 13 1.70e-04 atacgctgtt tgagcaca aaggagattc chrX:223133-223213 25 1.70e-04 CAGCACACAT TAGGCACC TGTTGTATGC chr19:45206225-45206305 53 1.70e-04 taacatgtat tgggcact tactgtatac chr19:844776-844856 47 1.70e-04 tgcttggggt tgggcact gtggctcacg chr19:47530247-47530327 11 1.70e-04 CTCCCAGTAT TAGGCACC TACTGTATGC chr19:943888-943968 21 1.70e-04 gaccctctca tgggcact tacggggcac chr16:22286434-22286514 53 1.70e-04 GGCCTGGAGC TGGGCACT GAGTATTTGC chrX:223676-223756 60 1.70e-04 AAGCACAGAT TAGGCACC CGTTGTATGC chrX:44344205-44344285 48 2.13e-04 taccacttat tgagaacc tgctgtgtac chr16:81667753-81667833 37 2.13e-04 ccccagcgtt tgagaacc actgCAGTAG chr10:74702970-74703050 52 2.44e-04 ccacacccAA TAAGCACT TATTTACTGA chr22:37640563-37640643 28 2.57e-04 Gagcatttaa tgagtgcc tgctgtgtgc chrX:154843788-154843868 12 2.57e-04 taaacattaa tgagtgcc tactgtatgc chr14:77278020-77278100 57 2.57e-04 CTGAattcac tgagtgcc tactgtatac chr17:2852731-2852811 65 2.57e-04 GAGCATTAAC TGAGTGCC TGCTGTAT chr19:3710683-3710763 23 3.32e-04 gggcatttat tgtgcact tactgtatgc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:2476046-2476126 1.4e-05 20_[+2]_52 chr20:44486726-44486806 1.4e-05 23_[+2]_49 chr20:32320583-32320663 1.4e-05 41_[+2]_31 chr19:513609-513689 1.4e-05 37_[+2]_35 chr2:10077532-10077612 1.4e-05 44_[+2]_28 chr11:75044591-75044671 1.4e-05 20_[+2]_52 chr19:514435-514515 1.4e-05 2_[+2]_70 chr1:180600664-180600744 1.4e-05 64_[+2]_8 chr16:26657157-26657237 1.4e-05 52_[+2]_20 chr10:70824663-70824743 1.4e-05 66_[+2]_6 chr20:48926028-48926108 1.4e-05 72_[+2] chr7:2720622-2720702 1.4e-05 37_[+2]_35 chr12:109358644-10935872 1.4e-05 56_[+2]_16 chr19:702602-702682 1.4e-05 25_[+2]_47 chr3:14380555-14380635 1.4e-05 26_[+2]_46 chr14:102204554-10220463 1.4e-05 46_[+2]_26 chr1:25282458-25282538 1.4e-05 68_[+2]_4 chr19:50042578-50042658 1.4e-05 24_[+2]_48 chr5:137972563-137972643 1.4e-05 47_[+2]_25 chr1:12636583-12636663 1.4e-05 70_[+2]_2 chr19:1808485-1808565 1.4e-05 6_[+2]_66 chr19:18243258-18243338 1.4e-05 55_[+2]_17 chr19:17396711-17396791 1.4e-05 24_[+2]_48 chr19:960762-960842 2.7e-05 30_[+2]_42 chr19:45504130-45504210 2.7e-05 18_[+2]_54 chr12:54610674-54610754 3.9e-05 26_[+2]_46 chr4:77869108-77869188 3.9e-05 59_[+2]_13 chr8:128980086-128980166 3.9e-05 68_[+2]_4 chr19:3398260-3398340 3.9e-05 62_[+2]_10 chr9:127075074-127075154 3.9e-05 61_[+2]_11 chr19:11337485-11337565 7.1e-05 44_[+2]_28 chr10:99497643-99497723 7.1e-05 36_[+2]_36 chr19:17357656-17357736 7.1e-05 47_[+2]_25 chr17:43432177-43432257 7.1e-05 22_[+2]_50 chr19:18412305-18412385 7.1e-05 49_[+2]_23 chr1:53606281-53606361 7.1e-05 57_[+2]_15 chr17:55332662-55332742 7.1e-05 56_[+2]_16 chr16:70325011-70325091 7.1e-05 27_[+2]_45 chr20:34427834-34427914 8.6e-05 30_[+2]_42 chr6:157097845-157097925 8.6e-05 72_[+2] chr6:42688718-42688798 8.6e-05 71_[+2]_1 chr16:66981317-66981397 9.9e-05 64_[+2]_8 chr1:15364990-15365070 9.9e-05 48_[+2]_24 chr1:15365206-15365286 9.9e-05 45_[+2]_27 chr5:175273495-175273575 0.00013 25_[+2]_47 chr19:3371633-3371713 0.00013 66_[+2]_6 chr16:66988233-66988313 0.00013 53_[+2]_19 chr7:134521654-134521734 0.00017 67_[+2]_5 chr2:20046542-20046622 0.00017 23_[+2]_49 chr21:45118660-45118740 0.00017 12_[+2]_60 chrX:223133-223213 0.00017 24_[+2]_48 chr19:45206225-45206305 0.00017 52_[+2]_20 chr19:844776-844856 0.00017 46_[+2]_26 chr19:47530247-47530327 0.00017 10_[+2]_62 chr19:943888-943968 0.00017 20_[+2]_52 chr16:22286434-22286514 0.00017 52_[+2]_20 chrX:223676-223756 0.00017 59_[+2]_13 chrX:44344205-44344285 0.00021 47_[+2]_25 chr16:81667753-81667833 0.00021 36_[+2]_36 chr10:74702970-74703050 0.00024 51_[+2]_21 chr22:37640563-37640643 0.00026 27_[+2]_45 chrX:154843788-154843868 0.00026 11_[+2]_61 chr14:77278020-77278100 0.00026 56_[+2]_16 chr17:2852731-2852811 0.00026 64_[+2]_8 chr19:3710683-3710763 0.00033 22_[+2]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAGCACC width=8 seqs=65 chr1:2476046-2476126 ( 21) TGAGCACC 1 chr20:44486726-44486806 ( 24) TGAGCACC 1 chr20:32320583-32320663 ( 42) TGAGCACC 1 chr19:513609-513689 ( 38) TGAGCACC 1 chr2:10077532-10077612 ( 45) TGAGCACC 1 chr11:75044591-75044671 ( 21) TGAGCACC 1 chr19:514435-514515 ( 3) TGAGCACC 1 chr1:180600664-180600744 ( 65) TGAGCACC 1 chr16:26657157-26657237 ( 53) TGAGCACC 1 chr10:70824663-70824743 ( 67) TGAGCACC 1 chr20:48926028-48926108 ( 73) TGAGCACC 1 chr7:2720622-2720702 ( 38) TGAGCACC 1 chr12:109358644-10935872 ( 57) TGAGCACC 1 chr19:702602-702682 ( 26) TGAGCACC 1 chr3:14380555-14380635 ( 27) TGAGCACC 1 chr14:102204554-10220463 ( 47) TGAGCACC 1 chr1:25282458-25282538 ( 69) TGAGCACC 1 chr19:50042578-50042658 ( 25) TGAGCACC 1 chr5:137972563-137972643 ( 48) TGAGCACC 1 chr1:12636583-12636663 ( 71) TGAGCACC 1 chr19:1808485-1808565 ( 7) TGAGCACC 1 chr19:18243258-18243338 ( 56) TGAGCACC 1 chr19:17396711-17396791 ( 25) TGAGCACC 1 chr19:960762-960842 ( 31) TGGGCACC 1 chr19:45504130-45504210 ( 19) TGGGCACC 1 chr12:54610674-54610754 ( 27) TGAGCGCC 1 chr4:77869108-77869188 ( 60) TGAGCGCC 1 chr8:128980086-128980166 ( 69) TGAGCGCC 1 chr19:3398260-3398340 ( 63) TGAGCGCC 1 chr9:127075074-127075154 ( 62) TGAGCGCC 1 chr19:11337485-11337565 ( 45) TGAGCACT 1 chr10:99497643-99497723 ( 37) TAAGCACC 1 chr19:17357656-17357736 ( 48) TAAGCACC 1 chr17:43432177-43432257 ( 23) TAAGCACC 1 chr19:18412305-18412385 ( 50) TGAGCACT 1 chr1:53606281-53606361 ( 58) TAAGCACC 1 chr17:55332662-55332742 ( 57) TAAGCACC 1 chr16:70325011-70325091 ( 28) TGAGCACT 1 chr20:34427834-34427914 ( 31) TGAGTACC 1 chr6:157097845-157097925 ( 73) TGAGTACC 1 chr6:42688718-42688798 ( 72) TGAGTACC 1 chr16:66981317-66981397 ( 65) TGTGCACC 1 chr1:15364990-15365070 ( 49) TGTGCACC 1 chr1:15365206-15365286 ( 46) TGTGCACC 1 chr5:175273495-175273575 ( 26) TGAACACC 1 chr19:3371633-3371713 ( 67) TGAACACC 1 chr16:66988233-66988313 ( 54) TGAACACC 1 chr7:134521654-134521734 ( 68) TAGGCACC 1 chr2:20046542-20046622 ( 24) TGAGCACA 1 chr21:45118660-45118740 ( 13) TGAGCACA 1 chrX:223133-223213 ( 25) TAGGCACC 1 chr19:45206225-45206305 ( 53) TGGGCACT 1 chr19:844776-844856 ( 47) TGGGCACT 1 chr19:47530247-47530327 ( 11) TAGGCACC 1 chr19:943888-943968 ( 21) TGGGCACT 1 chr16:22286434-22286514 ( 53) TGGGCACT 1 chrX:223676-223756 ( 60) TAGGCACC 1 chrX:44344205-44344285 ( 48) TGAGAACC 1 chr16:81667753-81667833 ( 37) TGAGAACC 1 chr10:74702970-74703050 ( 52) TAAGCACT 1 chr22:37640563-37640643 ( 28) TGAGTGCC 1 chrX:154843788-154843868 ( 12) TGAGTGCC 1 chr14:77278020-77278100 ( 57) TGAGTGCC 1 chr17:2852731-2852811 ( 65) TGAGTGCC 1 chr19:3710683-3710763 ( 23) TGTGCACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.87609 E= 6.8e-039 -1267 -1267 -1267 197 -80 -1267 184 -1267 155 -1267 -62 -205 -254 -1267 201 -1267 -312 185 -1267 -125 168 -1267 -77 -1267 -1267 206 -1267 -1267 -312 179 -1267 -88 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 65 E= 6.8e-039 0.000000 0.000000 0.000000 1.000000 0.153846 0.000000 0.846154 0.000000 0.784615 0.000000 0.153846 0.061538 0.046154 0.000000 0.953846 0.000000 0.030769 0.861538 0.000000 0.107692 0.861538 0.000000 0.138462 0.000000 0.000000 1.000000 0.000000 0.000000 0.030769 0.830769 0.000000 0.138462 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGCACC MEME-2 regular expression -------------------------------------------------------------------------------- TGAGCACC -------------------------------------------------------------------------------- Time 8.15 secs. ******************************************************************************** ******************************************************************************** MOTIF AATAAATG MEME-3 width = 8 sites = 51 llr = 455 E-value = 1.6e-031 ******************************************************************************** -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 99:a99:: pos.-specific C 1:::1::: probability G :::::1:a matrix T ::a:::9: bits 2.1 * 1.9 ** * 1.7 ** ** 1.5 ******* Relative 1.2 ******** Entropy 1.0 ******** (12.9 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AATAAATG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:31288491-31288571 11 2.13e-05 ttcttagcat aataaatg cattcaaagc chr7:75521302-75521382 31 2.13e-05 gcaggtgctc aataaatg tttgttgCCC chr20:55760985-55761065 36 2.13e-05 ctaagtgctc aataaatg ctagctcagg chr10:76998271-76998351 31 2.13e-05 gcaggcgcta aataaatg ctcttgaCTA chrX:117670718-117670798 58 2.13e-05 gtaggaactc aataaatg CATCTTTATG chr16:85353471-85353551 39 2.13e-05 taaggtgctc aataaatg cttgttgagt chr19:18362681-18362761 30 2.13e-05 ctaggcactt aataaatg cgcatagcat chr20:33291262-33291342 29 2.13e-05 GTAGGTGCCT AATAAATG TTGAATGCAT chr19:10547344-10547424 1 2.13e-05 . aataaatg tcttgttatt chr10:115280868-11528094 29 2.13e-05 gtaggtgctc aataaatg caggtggaac chr4:96211808-96211888 35 2.13e-05 gtaagcatat aataaatg ttggctacta chr19:30363145-30363225 22 2.13e-05 AGGACTTGTG AATAAATG CGTGGAACTG chr21:38218564-38218644 51 2.13e-05 gtaggcactc aataaatg ttggttTCCT chr16:81442199-81442279 30 2.13e-05 gtaggtgctc aataaatg tcgaatacat chr2:65874518-65874598 45 2.13e-05 gtaggtgttc aataaatg tctgttgtga chr11:78074378-78074458 71 2.13e-05 gtaggtgctc aataaatg tt chr19:11359710-11359790 25 2.13e-05 CTAGGTACCA AATAAATG TTGGTTGGAT chr5:173109513-173109593 14 2.13e-05 gtaggtgctc aataaatg aatgaaAAAG chr16:24864559-24864639 53 2.13e-05 gttggtgcct aataaatg tttattTcac chr12:123446399-12344647 52 2.13e-05 GTGTGTGCTT AATAAATG TTTGTCCACT chr16:2076607-2076687 16 2.13e-05 gtaggtatcc aataaatg ttcctgggat chr11:67314603-67314683 27 2.13e-05 gtaagtgctc aataaatg gctgaaAACA chr1:11332748-11332828 36 2.13e-05 gcaggcgctc aataaatg cttgtagcat chr17:27088315-27088395 45 2.13e-05 aaaggtgcct aataaatg cttgctgaat chr10:112619671-11261975 39 2.13e-05 gcagtcactc aataaatg gtggAGTCCA chr19:50998523-50998603 7 2.13e-05 gtactc aataaatg cccattTTCT chr22:20244566-20244646 13 4.04e-05 ggaggtgctc cataaatg ttagtcatgt chr12:124978901-12497898 45 4.04e-05 GCAAGCACCC CATAAATG CCAAAGGAGC chr19:50999821-50999901 51 4.04e-05 GCAGGTACTC CATAAATG CCTGTCCCCT chr1:2480679-2480759 10 4.04e-05 caggtgcct cataaatg tgggctgaac chr19:17503845-17503925 45 4.04e-05 GTAGTCACTC CATAAATG GAAATGGCTG chr6:30539963-30540043 20 4.04e-05 TTAAGGGGGA CATAAATG GACACAACTA chr19:17795235-17795315 54 5.92e-05 gcataaataa aATAAGTG ACTTCATGAA chr16:1444521-1444601 20 5.92e-05 gcaggtgcct aataagtg cctattaaaa chr19:29999244-29999324 15 5.92e-05 gtaggtactc aataagtg atagtGcatg chr19:3371633-3371713 20 5.92e-05 gtaggtgcca aataagtg ctGCTGTGCT chr16:2021621-2021701 24 7.83e-05 gaaggtgctc aatacatG AATGCCTTTG chr10:70824663-70824743 52 7.83e-05 GTTGAACAAG AATacatg catttattga chr5:176131573-176131653 53 7.83e-05 gtaagtgctc aatacatg cttgctgTCA chr19:50997887-50997967 30 7.83e-05 GTAGGCACTC AATACATG CCTATTTCCT chr1:205680868-205680948 71 1.18e-04 tgttggaaaa attaaatg ag chr16:89641730-89641810 15 1.18e-04 acaggcgccc actaaatg cttgttgaTG chr20:621757-621837 19 1.18e-04 taccttgagg attaaatg agctaaataa chr14:91885187-91885267 65 1.18e-04 TACAGCAGGC ACTAAATG GCTGCCGA chr3:57993773-57993853 15 1.40e-04 ggcggagctc aataaaag cccttactga chr3:101659736-101659816 48 1.40e-04 AATGGTGCTC AATAAAAG CTTGTTAATT chr6:119121184-119121264 10 1.59e-04 taggggctg gataaatg cttgttgTTG chr12:123436911-12343699 30 2.19e-04 gtaggtgctc aataaagg tcagtgaatg chr1:231112949-231113029 50 2.19e-04 gcaagcactc aatatatg tcggctactT chr20:48334306-48334386 45 2.19e-04 gtaggcgctg aataattg ttgaaggaCG chr7:101387277-101387357 27 2.39e-04 tggcctccaa aacaaatg agaacagccc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:31288491-31288571 2.1e-05 10_[+3]_62 chr7:75521302-75521382 2.1e-05 30_[+3]_42 chr20:55760985-55761065 2.1e-05 35_[+3]_37 chr10:76998271-76998351 2.1e-05 30_[+3]_42 chrX:117670718-117670798 2.1e-05 57_[+3]_15 chr16:85353471-85353551 2.1e-05 38_[+3]_34 chr19:18362681-18362761 2.1e-05 29_[+3]_43 chr20:33291262-33291342 2.1e-05 28_[+3]_44 chr19:10547344-10547424 2.1e-05 [+3]_72 chr10:115280868-11528094 2.1e-05 28_[+3]_44 chr4:96211808-96211888 2.1e-05 34_[+3]_38 chr19:30363145-30363225 2.1e-05 21_[+3]_51 chr21:38218564-38218644 2.1e-05 50_[+3]_22 chr16:81442199-81442279 2.1e-05 29_[+3]_43 chr2:65874518-65874598 2.1e-05 44_[+3]_28 chr11:78074378-78074458 2.1e-05 70_[+3]_2 chr19:11359710-11359790 2.1e-05 24_[+3]_48 chr5:173109513-173109593 2.1e-05 13_[+3]_59 chr16:24864559-24864639 2.1e-05 52_[+3]_20 chr12:123446399-12344647 2.1e-05 51_[+3]_21 chr16:2076607-2076687 2.1e-05 15_[+3]_57 chr11:67314603-67314683 2.1e-05 26_[+3]_46 chr1:11332748-11332828 2.1e-05 35_[+3]_37 chr17:27088315-27088395 2.1e-05 44_[+3]_28 chr10:112619671-11261975 2.1e-05 38_[+3]_34 chr19:50998523-50998603 2.1e-05 6_[+3]_66 chr22:20244566-20244646 4e-05 12_[+3]_60 chr12:124978901-12497898 4e-05 44_[+3]_28 chr19:50999821-50999901 4e-05 50_[+3]_22 chr1:2480679-2480759 4e-05 9_[+3]_63 chr19:17503845-17503925 4e-05 44_[+3]_28 chr6:30539963-30540043 4e-05 19_[+3]_53 chr19:17795235-17795315 5.9e-05 53_[+3]_19 chr16:1444521-1444601 5.9e-05 19_[+3]_53 chr19:29999244-29999324 5.9e-05 14_[+3]_58 chr19:3371633-3371713 5.9e-05 19_[+3]_53 chr16:2021621-2021701 7.8e-05 23_[+3]_49 chr10:70824663-70824743 7.8e-05 51_[+3]_21 chr5:176131573-176131653 7.8e-05 52_[+3]_20 chr19:50997887-50997967 7.8e-05 29_[+3]_43 chr1:205680868-205680948 0.00012 70_[+3]_2 chr16:89641730-89641810 0.00012 14_[+3]_58 chr20:621757-621837 0.00012 18_[+3]_54 chr14:91885187-91885267 0.00012 64_[+3]_8 chr3:57993773-57993853 0.00014 14_[+3]_58 chr3:101659736-101659816 0.00014 47_[+3]_25 chr6:119121184-119121264 0.00016 9_[+3]_63 chr12:123436911-12343699 0.00022 29_[+3]_43 chr1:231112949-231113029 0.00022 49_[+3]_23 chr20:48334306-48334386 0.00022 44_[+3]_28 chr7:101387277-101387357 0.00024 26_[+3]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AATAAATG width=8 seqs=51 chr1:31288491-31288571 ( 11) AATAAATG 1 chr7:75521302-75521382 ( 31) AATAAATG 1 chr20:55760985-55761065 ( 36) AATAAATG 1 chr10:76998271-76998351 ( 31) AATAAATG 1 chrX:117670718-117670798 ( 58) AATAAATG 1 chr16:85353471-85353551 ( 39) AATAAATG 1 chr19:18362681-18362761 ( 30) AATAAATG 1 chr20:33291262-33291342 ( 29) AATAAATG 1 chr19:10547344-10547424 ( 1) AATAAATG 1 chr10:115280868-11528094 ( 29) AATAAATG 1 chr4:96211808-96211888 ( 35) AATAAATG 1 chr19:30363145-30363225 ( 22) AATAAATG 1 chr21:38218564-38218644 ( 51) AATAAATG 1 chr16:81442199-81442279 ( 30) AATAAATG 1 chr2:65874518-65874598 ( 45) AATAAATG 1 chr11:78074378-78074458 ( 71) AATAAATG 1 chr19:11359710-11359790 ( 25) AATAAATG 1 chr5:173109513-173109593 ( 14) AATAAATG 1 chr16:24864559-24864639 ( 53) AATAAATG 1 chr12:123446399-12344647 ( 52) AATAAATG 1 chr16:2076607-2076687 ( 16) AATAAATG 1 chr11:67314603-67314683 ( 27) AATAAATG 1 chr1:11332748-11332828 ( 36) AATAAATG 1 chr17:27088315-27088395 ( 45) AATAAATG 1 chr10:112619671-11261975 ( 39) AATAAATG 1 chr19:50998523-50998603 ( 7) AATAAATG 1 chr22:20244566-20244646 ( 13) CATAAATG 1 chr12:124978901-12497898 ( 45) CATAAATG 1 chr19:50999821-50999901 ( 51) CATAAATG 1 chr1:2480679-2480759 ( 10) CATAAATG 1 chr19:17503845-17503925 ( 45) CATAAATG 1 chr6:30539963-30540043 ( 20) CATAAATG 1 chr19:17795235-17795315 ( 54) AATAAGTG 1 chr16:1444521-1444601 ( 20) AATAAGTG 1 chr19:29999244-29999324 ( 15) AATAAGTG 1 chr19:3371633-3371713 ( 20) AATAAGTG 1 chr16:2021621-2021701 ( 24) AATACATG 1 chr10:70824663-70824743 ( 52) AATACATG 1 chr5:176131573-176131653 ( 53) AATACATG 1 chr19:50997887-50997967 ( 30) AATACATG 1 chr1:205680868-205680948 ( 71) ATTAAATG 1 chr16:89641730-89641810 ( 15) ACTAAATG 1 chr20:621757-621837 ( 19) ATTAAATG 1 chr14:91885187-91885267 ( 65) ACTAAATG 1 chr3:57993773-57993853 ( 15) AATAAAAG 1 chr3:101659736-101659816 ( 48) AATAAAAG 1 chr6:119121184-119121264 ( 10) GATAAATG 1 chr12:123436911-12343699 ( 30) AATAAAGG 1 chr1:231112949-231113029 ( 50) AATATATG 1 chr20:48334306-48334386 ( 45) AATAATTG 1 chr7:101387277-101387357 ( 27) AACAAATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.99089 E= 1.6e-031 169 -103 -359 -1232 178 -261 -1232 -270 -1232 -361 -1232 194 190 -1232 -1232 -1232 175 -161 -1232 -370 175 -1232 -159 -370 -277 -1232 -359 188 -1232 -1232 208 -1232 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 51 E= 1.6e-031 0.862745 0.117647 0.019608 0.000000 0.921569 0.039216 0.000000 0.039216 0.000000 0.019608 0.000000 0.980392 1.000000 0.000000 0.000000 0.000000 0.901961 0.078431 0.000000 0.019608 0.901961 0.000000 0.078431 0.019608 0.039216 0.000000 0.019608 0.941176 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATAAATG MEME-3 regular expression -------------------------------------------------------------------------------- AATAAATG -------------------------------------------------------------------------------- Time 11.67 secs. ******************************************************************************** ******************************************************************************** MOTIF RCATTTAT MEME-4 width = 8 sites = 43 llr = 383 E-value = 7.2e-021 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 Description -------------------------------------------------------------------------------- Simplified A 3:a:::a: pos.-specific C 1a:2:::: probability G 6:::2::: matrix T :::88a:a bits 2.1 * 1.9 ** ** 1.7 ** *** 1.5 ** *** Relative 1.2 ******* Entropy 1.0 ******* (12.9 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCATTTAT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:54610674-54610754 19 1.73e-05 catctgaaaa gcatttat tgagcgccta chr1:155109769-155109849 10 1.73e-05 ATCACacaa gcatttat gaagctccta chr16:26657157-26657237 45 1.73e-05 tcttcaacag gcatttat tgagcacctg chr19:17357656-17357736 40 1.73e-05 CGCCcgacca gcatttat taagcaccct chr5:175273495-175273575 60 1.73e-05 CAGATACTGG GCATTTAT TGAACACTAC chr6:157097845-157097925 65 1.73e-05 tcagtcataa gcatttat tgagtacc chr17:43432177-43432257 15 1.73e-05 ccttcaacaa gcatttat taagcaccta chr19:18412305-18412385 42 1.73e-05 ATTATTTCAa gcatttat tgagcacttg chr19:3710683-3710763 15 1.73e-05 GAGCGaacgg gcatttat tgtgcactta chr19:702602-702682 18 1.73e-05 cattccgtga gcatttat tgagcaccta chr19:3402982-3403062 23 1.73e-05 tccctgacaa gcatttat tttgcacctg chr3:14380555-14380635 19 1.73e-05 tattccccaa gcatttat tgagcaccta chr19:954439-954519 37 1.73e-05 catttaacat gcatttat taggcaactg chr17:55332662-55332742 49 1.73e-05 GTATGAaacc gcatttat taagcaccta chr5:137972563-137972643 40 1.73e-05 CCAGCATcca gcatttat tgagcacctc chr16:66988233-66988313 46 1.73e-05 CATTCTGAAA GCATTTAT TGAACACCGG chr8:62504230-62504310 2 3.68e-05 G ACATTTAT GGAGCACTTA chr16:11318570-11318650 67 3.68e-05 cattccacaa acatttat tgagca chr20:34427834-34427914 23 3.68e-05 catttgctaa acatttat tgagtaccta chr8:128980086-128980166 61 3.68e-05 GCCtccactg acatttat tgagcgcctg chr1:193073411-193073491 51 3.68e-05 TAGTCATGCC acatttat ggagcgccta chr19:18209561-18209641 11 3.68e-05 tacccaacga acatttat ggagcgcctg chr19:45504130-45504210 11 3.68e-05 cctccaataa acatttat tgggcaccta chr19:50042578-50042658 17 3.68e-05 tagccaccca acatttat tgagcaccta chr1:180600664-180600744 57 5.31e-05 Aattcaataa gcacttat tgagcaccta chr1:231112949-231113029 14 5.31e-05 tagacctaaa gcacttat aacagcacct chr19:3398260-3398340 55 5.31e-05 CTCCACTGGC GCacttat tgagcgccag chr6:30539963-30540043 71 5.31e-05 AATtttaaaa gcacttat tg chr11:75044591-75044671 13 6.91e-05 GGGACAATCA Gcatgtat tgagcaccta chr12:109358644-10935872 49 6.91e-05 cattcaataa gcatgtat tgagcacctg chr19:17396711-17396791 51 6.91e-05 ACCTGCACAT GCATGTAT TTTGCTCCAT chr19:11337485-11337565 37 8.66e-05 ACATCAACAT ccatttat tgagcacttg chr4:77869108-77869188 28 8.66e-05 cgcgcccggc cCATTTAT GTGTAATCTT chr16:70325011-70325091 20 8.66e-05 atcaaaccta ccatttat tgagcactta chr19:960762-960842 23 1.05e-04 TTTACTGTGC acacttat tgggcaccaa chr3:14398088-14398168 38 1.05e-04 CCAGGAAGGG Acacttat taagctccaa chr19:45206225-45206305 45 1.23e-04 CATCtgacta acatgtat tgggcactta chr19:18243967-18244047 10 1.23e-04 AGAAaacag acatgtat gtggcacctg chr2:10077532-10077612 37 1.55e-04 GAGGGTAATA GCACGTAT TGAGCACCTA chr12:111851474-11185155 70 1.55e-04 cattcaagag gcattcat tga chrX:44344205-44344285 40 1.71e-04 CATGTagtta ccacttat tgagaacctg chrX:47441236-47441316 10 1.87e-04 tcagttctg ccatgtat tgactctgtg chr19:35805130-35805210 50 2.23e-04 ACCATCTCTC ACATTCAT GCTGCAATTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:54610674-54610754 1.7e-05 18_[+4]_54 chr1:155109769-155109849 1.7e-05 9_[+4]_63 chr16:26657157-26657237 1.7e-05 44_[+4]_28 chr19:17357656-17357736 1.7e-05 39_[+4]_33 chr5:175273495-175273575 1.7e-05 59_[+4]_13 chr6:157097845-157097925 1.7e-05 64_[+4]_8 chr17:43432177-43432257 1.7e-05 14_[+4]_58 chr19:18412305-18412385 1.7e-05 41_[+4]_31 chr19:3710683-3710763 1.7e-05 14_[+4]_58 chr19:702602-702682 1.7e-05 17_[+4]_55 chr19:3402982-3403062 1.7e-05 22_[+4]_50 chr3:14380555-14380635 1.7e-05 18_[+4]_54 chr19:954439-954519 1.7e-05 36_[+4]_36 chr17:55332662-55332742 1.7e-05 48_[+4]_24 chr5:137972563-137972643 1.7e-05 39_[+4]_33 chr16:66988233-66988313 1.7e-05 45_[+4]_27 chr8:62504230-62504310 3.7e-05 1_[+4]_71 chr16:11318570-11318650 3.7e-05 66_[+4]_6 chr20:34427834-34427914 3.7e-05 22_[+4]_50 chr8:128980086-128980166 3.7e-05 60_[+4]_12 chr1:193073411-193073491 3.7e-05 50_[+4]_22 chr19:18209561-18209641 3.7e-05 10_[+4]_62 chr19:45504130-45504210 3.7e-05 10_[+4]_62 chr19:50042578-50042658 3.7e-05 16_[+4]_56 chr1:180600664-180600744 5.3e-05 56_[+4]_16 chr1:231112949-231113029 5.3e-05 13_[+4]_59 chr19:3398260-3398340 5.3e-05 54_[+4]_18 chr6:30539963-30540043 5.3e-05 70_[+4]_2 chr11:75044591-75044671 6.9e-05 12_[+4]_60 chr12:109358644-10935872 6.9e-05 48_[+4]_24 chr19:17396711-17396791 6.9e-05 50_[+4]_22 chr19:11337485-11337565 8.7e-05 36_[+4]_36 chr4:77869108-77869188 8.7e-05 27_[+4]_45 chr16:70325011-70325091 8.7e-05 19_[+4]_53 chr19:960762-960842 0.0001 22_[+4]_50 chr3:14398088-14398168 0.0001 37_[+4]_35 chr19:45206225-45206305 0.00012 44_[+4]_28 chr19:18243967-18244047 0.00012 9_[+4]_63 chr2:10077532-10077612 0.00015 36_[+4]_36 chr12:111851474-11185155 0.00015 69_[+4]_3 chrX:44344205-44344285 0.00017 39_[+4]_33 chrX:47441236-47441316 0.00019 9_[+4]_63 chr19:35805130-35805210 0.00022 49_[+4]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCATTTAT width=8 seqs=43 chr12:54610674-54610754 ( 19) GCATTTAT 1 chr1:155109769-155109849 ( 10) GCATTTAT 1 chr16:26657157-26657237 ( 45) GCATTTAT 1 chr19:17357656-17357736 ( 40) GCATTTAT 1 chr5:175273495-175273575 ( 60) GCATTTAT 1 chr6:157097845-157097925 ( 65) GCATTTAT 1 chr17:43432177-43432257 ( 15) GCATTTAT 1 chr19:18412305-18412385 ( 42) GCATTTAT 1 chr19:3710683-3710763 ( 15) GCATTTAT 1 chr19:702602-702682 ( 18) GCATTTAT 1 chr19:3402982-3403062 ( 23) GCATTTAT 1 chr3:14380555-14380635 ( 19) GCATTTAT 1 chr19:954439-954519 ( 37) GCATTTAT 1 chr17:55332662-55332742 ( 49) GCATTTAT 1 chr5:137972563-137972643 ( 40) GCATTTAT 1 chr16:66988233-66988313 ( 46) GCATTTAT 1 chr8:62504230-62504310 ( 2) ACATTTAT 1 chr16:11318570-11318650 ( 67) ACATTTAT 1 chr20:34427834-34427914 ( 23) ACATTTAT 1 chr8:128980086-128980166 ( 61) ACATTTAT 1 chr1:193073411-193073491 ( 51) ACATTTAT 1 chr19:18209561-18209641 ( 11) ACATTTAT 1 chr19:45504130-45504210 ( 11) ACATTTAT 1 chr19:50042578-50042658 ( 17) ACATTTAT 1 chr1:180600664-180600744 ( 57) GCACTTAT 1 chr1:231112949-231113029 ( 14) GCACTTAT 1 chr19:3398260-3398340 ( 55) GCACTTAT 1 chr6:30539963-30540043 ( 71) GCACTTAT 1 chr11:75044591-75044671 ( 13) GCATGTAT 1 chr12:109358644-10935872 ( 49) GCATGTAT 1 chr19:17396711-17396791 ( 51) GCATGTAT 1 chr19:11337485-11337565 ( 37) CCATTTAT 1 chr4:77869108-77869188 ( 28) CCATTTAT 1 chr16:70325011-70325091 ( 20) CCATTTAT 1 chr19:960762-960842 ( 23) ACACTTAT 1 chr3:14398088-14398168 ( 38) ACACTTAT 1 chr19:45206225-45206305 ( 45) ACATGTAT 1 chr19:18243967-18244047 ( 10) ACATGTAT 1 chr2:10077532-10077612 ( 37) GCACGTAT 1 chr12:111851474-11185155 ( 70) GCATTCAT 1 chrX:44344205-44344285 ( 40) CCACTTAT 1 chrX:47441236-47441316 ( 10) CCATGTAT 1 chr19:35805130-35805210 ( 50) ACATTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.73438 E= 7.2e-021 17 -104 130 -1207 -1207 206 -1207 -1207 190 -1207 -1207 -1207 -1207 -37 -1207 167 -1207 -1207 -54 171 -1207 -236 -1207 190 190 -1207 -1207 -1207 -1207 -1207 -1207 197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 43 E= 7.2e-021 0.302326 0.116279 0.581395 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.186047 0.000000 0.813953 0.000000 0.000000 0.162791 0.837209 0.000000 0.046512 0.000000 0.953488 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATTTAT MEME-4 regular expression -------------------------------------------------------------------------------- [GA]CATTTAT -------------------------------------------------------------------------------- Time 14.86 secs. ******************************************************************************** ******************************************************************************** MOTIF GDGCCTGG MEME-5 width = 8 sites = 21 llr = 189 E-value = 2.4e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :2:2:::: pos.-specific C :::5a::: probability G a4a2::aa matrix T :4:1:a:: bits 2.1 * * * ** 1.9 * * **** 1.7 * * **** 1.5 * * **** Relative 1.2 * * **** Entropy 1.0 * * **** (13.0 bits) 0.8 * * **** 0.6 * * **** 0.4 *** **** 0.2 ******** 0.0 -------- Multilevel GGGCCTGG consensus T sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:31352102-31352182 48 2.28e-05 ctaccacatt gggcctgg gtaaagaggc chr20:50202543-50202623 7 2.28e-05 tcccca gtgcctgg aagctgccta chr16:88536390-88536470 69 2.28e-05 TCTGCTCCCT GTGCCTGG CTGT chr19:17795235-17795315 6 2.28e-05 gaaca gtgcctgg tatacagtag chr16:85353471-85353551 15 2.28e-05 acctagcatg gtgcctgg caaacataag chr16:81442199-81442279 6 2.28e-05 cctca gtgcctgg tattcagtag chr16:22286434-22286514 42 2.28e-05 GCATGGGGCG GGGCCTGG AGCTGGGCAC chr16:89641730-89641810 59 3.52e-05 GAAACCAGCG GAGCCTGG AAATGGGATC chr16:24864559-24864639 29 3.52e-05 gcctagtaca gagcctgg tacatagttg chr19:3455555-3455635 4 3.52e-05 cca gagcctgg tatacaatag chr12:123436911-12343699 5 5.77e-05 gttt ggggctgg gcatacagta chr19:17357656-17357736 18 5.77e-05 CCCCAGTACC GGGGCTGG GGCCCGCCcg chr18:74535303-74535383 40 5.77e-05 TGTGATCCGG GGGGCTGG AACCCTGGGC chr22:29075272-29075352 20 5.77e-05 CCGCCCCACG GGGGCTGG GGGAAAAGGG chr22:17001860-17001940 68 8.32e-05 GCGGAACCTG GGGACTGG AGTCC chr19:844776-844856 6 8.32e-05 agaac gggactgg gcatacaggt chr20:621757-621837 56 1.07e-04 acacagagct gtgtctgg cacataggag chr10:6623930-6624010 42 1.07e-04 AAGTGCGTCT GTGTCTGG AAACAAAGAG chr11:67314603-67314683 3 1.07e-04 ca gtgtctgg aacacagtaa chr7:101387277-101387357 56 1.34e-04 tgccctcagg gagACTGG GGGACGCCAC chr19:50998523-50998603 51 1.34e-04 GAAAGAAGCA GAGACTGG TGGAGTCAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:31352102-31352182 2.3e-05 47_[+5]_25 chr20:50202543-50202623 2.3e-05 6_[+5]_66 chr16:88536390-88536470 2.3e-05 68_[+5]_4 chr19:17795235-17795315 2.3e-05 5_[+5]_67 chr16:85353471-85353551 2.3e-05 14_[+5]_58 chr16:81442199-81442279 2.3e-05 5_[+5]_67 chr16:22286434-22286514 2.3e-05 41_[+5]_31 chr16:89641730-89641810 3.5e-05 58_[+5]_14 chr16:24864559-24864639 3.5e-05 28_[+5]_44 chr19:3455555-3455635 3.5e-05 3_[+5]_69 chr12:123436911-12343699 5.8e-05 4_[+5]_68 chr19:17357656-17357736 5.8e-05 17_[+5]_55 chr18:74535303-74535383 5.8e-05 39_[+5]_33 chr22:29075272-29075352 5.8e-05 19_[+5]_53 chr22:17001860-17001940 8.3e-05 67_[+5]_5 chr19:844776-844856 8.3e-05 5_[+5]_67 chr20:621757-621837 0.00011 55_[+5]_17 chr10:6623930-6624010 0.00011 41_[+5]_31 chr11:67314603-67314683 0.00011 2_[+5]_70 chr7:101387277-101387357 0.00013 55_[+5]_17 chr19:50998523-50998603 0.00013 50_[+5]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GDGCCTGG width=8 seqs=21 chr20:31352102-31352182 ( 48) GGGCCTGG 1 chr20:50202543-50202623 ( 7) GTGCCTGG 1 chr16:88536390-88536470 ( 69) GTGCCTGG 1 chr19:17795235-17795315 ( 6) GTGCCTGG 1 chr16:85353471-85353551 ( 15) GTGCCTGG 1 chr16:81442199-81442279 ( 6) GTGCCTGG 1 chr16:22286434-22286514 ( 42) GGGCCTGG 1 chr16:89641730-89641810 ( 59) GAGCCTGG 1 chr16:24864559-24864639 ( 29) GAGCCTGG 1 chr19:3455555-3455635 ( 4) GAGCCTGG 1 chr12:123436911-12343699 ( 5) GGGGCTGG 1 chr19:17357656-17357736 ( 18) GGGGCTGG 1 chr18:74535303-74535383 ( 40) GGGGCTGG 1 chr22:29075272-29075352 ( 20) GGGGCTGG 1 chr22:17001860-17001940 ( 68) GGGACTGG 1 chr19:844776-844856 ( 6) GGGACTGG 1 chr20:621757-621837 ( 56) GTGTCTGG 1 chr10:6623930-6624010 ( 42) GTGTCTGG 1 chr11:67314603-67314683 ( 3) GTGTCTGG 1 chr7:101387277-101387357 ( 56) GAGACTGG 1 chr19:50998523-50998603 ( 51) GAGACTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.6191 E= 2.4e+001 -1104 -1104 208 -1104 -17 -1104 69 58 -1104 -1104 208 -1104 -49 99 -31 -84 -1104 206 -1104 -1104 -1104 -1104 -1104 197 -1104 -1104 208 -1104 -1104 -1104 208 -1104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 21 E= 2.4e+001 0.000000 0.000000 1.000000 0.000000 0.238095 0.000000 0.380952 0.380952 0.000000 0.000000 1.000000 0.000000 0.190476 0.476190 0.190476 0.142857 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GDGCCTGG MEME-5 regular expression -------------------------------------------------------------------------------- G[GTA]GCCTGG -------------------------------------------------------------------------------- Time 17.99 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:1142376-1142456 3.47e-01 80 chr19:50997887-50997967 4.30e-04 17_[+1(5.69e-05)]_4_[+3(7.83e-05)]_\ 43 chr2:99198984-99199064 6.75e-01 80 chr8:145607572-145607652 2.24e-01 80 chr19:17396711-17396791 1.34e-03 24_[+2(1.42e-05)]_18_[+4(6.91e-05)]_\ 22 chr5:1332972-1333052 2.34e-01 80 chr19:18243258-18243338 3.11e-04 55_[+2(1.42e-05)]_17 chr19:47815772-47815852 4.18e-02 80 chr16:66988233-66988313 1.04e-04 45_[+4(1.73e-05)]_27 chr20:48334306-48334386 3.18e-03 32_[+1(5.69e-05)]_40 chr6:30539963-30540043 1.08e-04 19_[+3(4.04e-05)]_43_[+4(5.31e-05)]_\ 2 chr19:18243967-18244047 5.57e-04 27_[+1(8.84e-05)]_45 chr19:50998523-50998603 2.16e-03 6_[+3(2.13e-05)]_66 chr20:48912048-48912128 4.58e-01 80 chr17:46325110-46325190 7.77e-01 80 chr16:70325011-70325091 1.10e-03 19_[+4(8.66e-05)]_[+2(7.06e-05)]_45 chr19:1808485-1808565 2.23e-03 6_[+2(1.42e-05)]_32_[+2(1.42e-05)]_\ 26 chr1:12636583-12636663 1.40e-05 62_[+4(1.73e-05)]_[+2(1.42e-05)]_2 chr15:78170650-78170730 2.13e-01 80 chr5:137972563-137972643 4.84e-04 39_[+4(1.73e-05)]_[+2(1.42e-05)]_25 chr20:48674302-48674382 3.62e-02 80 chr10:112619671-11261975 1.03e-02 38_[+3(2.13e-05)]_34 chr22:29075272-29075352 1.97e-03 19_[+5(5.77e-05)]_36_[+1(8.84e-05)]_\ 9 chr17:27088315-27088395 8.08e-03 44_[+3(2.13e-05)]_28 chr19:50042578-50042658 2.24e-04 16_[+4(3.68e-05)]_[+2(1.42e-05)]_30_\ [+2(1.42e-05)]_10 chr19:4796928-4797008 3.59e-01 80 chr19:615664-615744 2.26e-02 80 chr11:63868336-63868416 1.19e-01 80 chr1:11332748-11332828 8.53e-04 35_[+3(2.13e-05)]_37 chr11:67314603-67314683 1.75e-04 26_[+3(2.13e-05)]_46 chr14:91885187-91885267 2.94e-03 80 chr3:46890195-46890275 6.67e-01 80 chr21:45245178-45245258 4.74e-02 80 chrX:223676-223756 2.60e-02 80 chr16:2076607-2076687 1.15e-03 15_[+3(2.13e-05)]_57 chr12:123446399-12344647 2.22e-03 51_[+3(2.13e-05)]_21 chr16:22286434-22286514 1.33e-03 41_[+5(2.28e-05)]_31 chr5:204729-204809 1.40e-01 80 chr2:101223488-101223568 4.10e-01 80 chr19:17503845-17503925 2.76e-03 44_[+3(4.04e-05)]_28 chr16:69756317-69756397 1.43e-01 80 chr9:117424441-117424521 2.73e-02 41_[+1(5.69e-05)]_31 chr1:40916349-40916429 3.93e-02 80 chr9:127075074-127075154 7.53e-04 61_[+2(3.94e-05)]_11 chr19:3455555-3455635 1.84e-03 3_[+5(3.52e-05)]_69 chr1:25282458-25282538 6.98e-03 68_[+2(1.42e-05)]_4 chr19:943888-943968 1.07e-03 41_[+1(1.44e-05)]_31 chrX:135282765-135282845 1.48e-02 19_[+1(8.84e-05)]_53 chr17:55332662-55332742 1.35e-05 48_[+4(1.73e-05)]_[+2(7.06e-05)]_2_\ [+1(1.44e-05)]_6 chr16:24864559-24864639 8.71e-04 28_[+5(3.52e-05)]_16_[+3(2.13e-05)]_\ 20 chr19:47530247-47530327 1.13e-03 20_[+1(1.44e-05)]_52 chr19:1515117-1515197 3.54e-01 80 chr19:18241814-18241894 4.60e-01 80 chr19:752949-753029 2.52e-03 42_[+1(8.84e-05)]_30 chr5:173109513-173109593 3.06e-03 13_[+3(2.13e-05)]_59 chr14:102204554-10220463 1.81e-03 46_[+2(1.42e-05)]_26 chr19:11313689-11313769 4.11e-02 80 chr6:42688718-42688798 6.36e-03 71_[+2(8.57e-05)]_1 chr19:954439-954519 5.31e-04 36_[+4(1.73e-05)]_36 chr19:11359710-11359790 1.55e-02 24_[+3(2.13e-05)]_48 chr4:88033493-88033573 5.57e-01 80 chr17:75082738-75082818 1.07e-01 80 chr19:45504130-45504210 6.90e-04 10_[+4(3.68e-05)]_[+2(2.68e-05)]_54 chr19:2739672-2739752 1.76e-01 80 chr1:68215142-68215222 1.45e-01 80 chr18:74535303-74535383 1.02e-03 16_[+1(5.69e-05)]_15_[+5(5.77e-05)]_\ 33 chr3:13033226-13033306 1.66e-02 80 chr12:120376047-12037612 1.01e-01 80 chr16:4936358-4936438 1.24e-02 80 chr11:78074378-78074458 4.08e-04 70_[+3(2.13e-05)]_2 chr3:14380555-14380635 4.50e-05 18_[+4(1.73e-05)]_[+2(1.42e-05)]_46 chr19:844776-844856 8.74e-04 5_[+5(8.32e-05)]_67 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48_[+4(6.91e-05)]_[+2(1.42e-05)]_2_\ [+1(8.84e-05)]_6 chr21:38218564-38218644 2.52e-04 8_[+3(2.13e-05)]_22_[+1(5.69e-05)]_\ 4_[+3(2.13e-05)]_22 chr7:2720622-2720702 1.27e-02 37_[+2(1.42e-05)]_35 chr6:157097845-157097925 2.86e-04 64_[+4(1.73e-05)]_[+2(8.57e-05)] chr4:77869108-77869188 7.58e-05 27_[+4(8.66e-05)]_24_[+2(3.94e-05)]_\ 2_[+1(8.84e-05)]_3 chr1:231112949-231113029 8.75e-04 13_[+4(5.31e-05)]_59 chr19:30363145-30363225 2.36e-04 21_[+3(2.13e-05)]_21_[+1(5.69e-05)]_\ 22 chrX:47441236-47441316 5.35e-02 80 chrX:223133-223213 2.86e-02 80 chr4:96211808-96211888 9.24e-03 34_[+3(2.13e-05)]_38 chr19:18285077-18285157 8.75e-02 80 chr4:96212009-96212089 6.35e-01 80 chr20:48926028-48926108 6.14e-04 64_[+4(3.68e-05)]_[+2(1.42e-05)] chr10:70824663-70824743 3.02e-05 58_[+4(1.73e-05)]_[+2(1.42e-05)]_6 chr1:15365206-15365286 2.44e-03 45_[+2(9.92e-05)]_2_[+1(8.84e-05)]_\ 17 chr12:124978901-12497898 1.35e-02 44_[+3(4.04e-05)]_28 chr19:18809648-18809728 2.03e-02 38_[+1(5.69e-05)]_34 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chr8:62504230-62504310 1.77e-04 1_[+4(3.68e-05)]_56_[+1(5.69e-05)]_\ 7 chr20:55760985-55761065 1.01e-02 35_[+3(2.13e-05)]_37 chr12:54610674-54610754 1.38e-04 18_[+4(1.73e-05)]_[+2(3.94e-05)]_46 chr20:31352102-31352182 2.21e-02 47_[+5(2.28e-05)]_25 chr1:205680868-205680948 1.52e-01 80 chr16:4819298-4819378 6.19e-01 80 chr16:2021621-2021701 1.13e-02 23_[+3(7.83e-05)]_49 chr6:119121184-119121264 5.36e-03 2_[+5(5.77e-05)]_70 chr19:18809436-18809516 1.12e-01 80 chrX:47438995-47439075 4.14e-01 80 chr17:54987283-54987363 2.03e-03 14_[+1(1.44e-05)]_58 chr3:47608818-47608898 1.02e-01 80 chr7:75521302-75521382 2.15e-03 30_[+3(2.13e-05)]_42 chr1:31288491-31288571 9.73e-03 10_[+3(2.13e-05)]_62 chr1:87258165-87258245 2.81e-01 80 chr1:22227799-22227879 1.80e-01 80 chr6:139897916-139897996 1.40e-02 17_[+1(8.84e-05)]_55 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n09.farnam.hpc.yale.internal ********************************************************************************