******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/POU5F1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chrX:40506832-40506912 1.0000 80 chr10:27389434-27389514 1.0000 80 chr16:53468299-53468379 1.0000 80 chr19:19144357-19144437 1.0000 80 chr7:6487579-6487659 1.0000 80 chr18:10525879-10525959 1.0000 80 chr12:120554665-12055474 1.0000 80 chr5:178450659-178450739 1.0000 80 chr19:18794367-18794447 1.0000 80 chr17:78965596-78965676 1.0000 80 chr2:75873828-75873908 1.0000 80 chr16:3661574-3661654 1.0000 80 chr10:30638287-30638367 1.0000 80 chr10:104192450-10419253 1.0000 80 chr8:100905930-100906010 1.0000 80 chr7:89874413-89874493 1.0000 80 chr19:52430612-52430692 1.0000 80 chr11:70049291-70049371 1.0000 80 chr20:35580159-35580239 1.0000 80 chr14:102785986-10278606 1.0000 80 chr19:39138221-39138301 1.0000 80 chr21:35747699-35747779 1.0000 80 chr12:110338000-11033808 1.0000 80 chr2:203776916-203776996 1.0000 80 chr2:27357490-27357570 1.0000 80 chr4:147096779-147096859 1.0000 80 chr17:27278634-27278714 1.0000 80 chr19:6199604-6199684 1.0000 80 chr14:50319566-50319646 1.0000 80 chr19:14225000-14225080 1.0000 80 chr12:110906112-11090619 1.0000 80 chr11:18610240-18610320 1.0000 80 chr6:150067710-150067790 1.0000 80 chr10:134145576-13414565 1.0000 80 chr9:71394886-71394966 1.0000 80 chr6:32097825-32097905 1.0000 80 chr2:3522672-3522752 1.0000 80 chr12:132434374-13243445 1.0000 80 chr16:48278113-48278193 1.0000 80 chr15:101142364-10114244 1.0000 80 chr7:149570987-149571067 1.0000 80 chr13:79233275-79233355 1.0000 80 chr17:29158869-29158949 1.0000 80 chr14:54976519-54976599 1.0000 80 chr1:231473647-231473727 1.0000 80 chr19:7968707-7968787 1.0000 80 chr12:13080578-13080658 1.0000 80 chr5:154317791-154317871 1.0000 80 chr1:116961243-116961323 1.0000 80 chr9:140513308-140513388 1.0000 80 chr20:42939796-42939876 1.0000 80 chr19:7985130-7985210 1.0000 80 chr2:62132703-62132783 1.0000 80 chr1:176176691-176176771 1.0000 80 chr1:180123601-180123681 1.0000 80 chr17:18087021-18087101 1.0000 80 chr2:15701444-15701524 1.0000 80 chr20:34042597-34042677 1.0000 80 chr5:33440761-33440841 1.0000 80 chr22:32808247-32808327 1.0000 80 chr20:33735133-33735213 1.0000 80 chr1:236687225-236687305 1.0000 80 chr11:69490126-69490206 1.0000 80 chr8:143484660-143484740 1.0000 80 chr1:32573586-32573666 1.0000 80 chr2:73298831-73298911 1.0000 80 chr19:33572042-33572122 1.0000 80 chr13:45694537-45694617 1.0000 80 chr11:124543689-12454376 1.0000 80 chr21:48055462-48055542 1.0000 80 chr7:149423-149503 1.0000 80 chr1:202858270-202858350 1.0000 80 chr2:242576994-242577074 1.0000 80 chr18:55297442-55297522 1.0000 80 chr8:27695356-27695436 1.0000 80 chr7:6629545-6629625 1.0000 80 chr14:65453501-65453581 1.0000 80 chr9:139702289-139702369 1.0000 80 chr10:16859664-16859744 1.0000 80 chr19:52490099-52490179 1.0000 80 chr17:2615133-2615213 1.0000 80 chr5:130500969-130501049 1.0000 80 chr15:91565833-91565913 1.0000 80 chr17:47754911-47754991 1.0000 80 chr16:188729-188809 1.0000 80 chr20:3140541-3140621 1.0000 80 chr11:111742264-11174234 1.0000 80 chr3:52232040-52232120 1.0000 80 chr1:95538485-95538565 1.0000 80 chr9:124922044-124922124 1.0000 80 chr17:42785916-42785996 1.0000 80 chr8:117887101-117887181 1.0000 80 chr2:85843159-85843239 1.0000 80 chr2:33824377-33824457 1.0000 80 chr4:6675612-6675692 1.0000 80 chr2:37193735-37193815 1.0000 80 chr11:113644510-11364459 1.0000 80 chr21:34697212-34697292 1.0000 80 chr13:27998646-27998726 1.0000 80 chr7:6388635-6388715 1.0000 80 chr4:54243757-54243837 1.0000 80 chr12:27090949-27091029 1.0000 80 chr19:40023479-40023559 1.0000 80 chr12:124068918-12406899 1.0000 80 chr19:51162305-51162385 1.0000 80 chr16:3550882-3550962 1.0000 80 chr1:167189761-167189841 1.0000 80 chrX:119737680-119737760 1.0000 80 chrX:152864754-152864834 1.0000 80 chr16:4401307-4401387 1.0000 80 chr16:80574779-80574859 1.0000 80 chr16:66968338-66968418 1.0000 80 chr16:58664412-58664492 1.0000 80 chr20:13765585-13765665 1.0000 80 chr2:3381592-3381672 1.0000 80 chr9:131038460-131038540 1.0000 80 chr11:1330893-1330973 1.0000 80 chr1:75198777-75198857 1.0000 80 chr10:102027409-10202748 1.0000 80 chr17:27169817-27169897 1.0000 80 chr8:133687827-133687907 1.0000 80 chr11:134094417-13409449 1.0000 80 chr12:54673904-54673984 1.0000 80 chr19:17622853-17622933 1.0000 80 chr16:23464447-23464527 1.0000 80 chr11:34073847-34073927 1.0000 80 chr19:663231-663311 1.0000 80 chrX:47863426-47863506 1.0000 80 chr17:57970328-57970408 1.0000 80 chr19:36605783-36605863 1.0000 80 chr20:30539843-30539923 1.0000 80 chr17:8103560-8103640 1.0000 80 chr19:2328604-2328684 1.0000 80 chr9:124855609-124855689 1.0000 80 chr16:19535069-19535149 1.0000 80 chr11:65029258-65029338 1.0000 80 chr17:7143085-7143165 1.0000 80 chr4:113558637-113558717 1.0000 80 chr10:104613973-10461405 1.0000 80 chr1:161129195-161129275 1.0000 80 chr22:20106245-20106325 1.0000 80 chr17:19265954-19266034 1.0000 80 chr19:11071371-11071451 1.0000 80 chr5:138678143-138678223 1.0000 80 chr15:49338690-49338770 1.0000 80 chr2:110970105-110970185 1.0000 80 chr15:42066631-42066711 1.0000 80 chr6:160182939-160183019 1.0000 80 chr4:2420569-2420649 1.0000 80 chr22:21356068-21356148 1.0000 80 chr15:41099640-41099720 1.0000 80 chr7:100034292-100034372 1.0000 80 chr6:30640818-30640898 1.0000 80 chr2:85581765-85581845 1.0000 80 chr14:90722846-90722926 1.0000 80 chr1:24127347-24127427 1.0000 80 chr19:2236249-2236329 1.0000 80 chr7:100797734-100797814 1.0000 80 chr19:35615529-35615609 1.0000 80 chr19:633553-633633 1.0000 80 chr19:531609-531689 1.0000 80 chr17:40714102-40714182 1.0000 80 chr17:41116478-41116558 1.0000 80 chr21:33651405-33651485 1.0000 80 chr7:5229798-5229878 1.0000 80 chr16:30546306-30546386 1.0000 80 chr3:14166395-14166475 1.0000 80 chr16:66586403-66586483 1.0000 80 chr10:69548379-69548459 1.0000 80 chr14:102771499-10277157 1.0000 80 chrX:30907515-30907595 1.0000 80 chr16:69419907-69419987 1.0000 80 chr5:218317-218397 1.0000 80 chr22:22000867-22000947 1.0000 80 chr22:22020235-22020315 1.0000 80 chr9:125590948-125591028 1.0000 80 chr1:21113283-21113363 1.0000 80 chr10:124639141-12463922 1.0000 80 chr6:20534644-20534724 1.0000 80 chr6:109169568-109169648 1.0000 80 chr2:228189913-228189993 1.0000 80 chr12:12764730-12764810 1.0000 80 chr5:1345210-1345290 1.0000 80 chr9:131084808-131084888 1.0000 80 chr22:22307274-22307354 1.0000 80 chr2:71558849-71558929 1.0000 80 chr1:16971194-16971274 1.0000 80 chr19:52097719-52097799 1.0000 80 chr10:124768345-12476842 1.0000 80 chr2:242626377-242626457 1.0000 80 chr5:42909091-42909171 1.0000 80 chr19:15530056-15530136 1.0000 80 chr5:77590520-77590600 1.0000 80 chr17:6544236-6544316 1.0000 80 chr18:61089791-61089871 1.0000 80 chr12:132413736-13241381 1.0000 80 chr3:47555242-47555322 1.0000 80 chr2:207024166-207024246 1.0000 80 chr21:46293764-46293844 1.0000 80 chr19:42721927-42722007 1.0000 80 chr12:88535948-88536028 1.0000 80 chr22:48027363-48027443 1.0000 80 chr1:165600137-165600217 1.0000 80 chr15:89010887-89010967 1.0000 80 chr6:41040311-41040391 1.0000 80 chr2:54014062-54014142 1.0000 80 chr1:155990753-155990833 1.0000 80 chr19:44100404-44100484 1.0000 80 chr9:130965527-130965607 1.0000 80 chr13:41635598-41635678 1.0000 80 chr20:25388220-25388300 1.0000 80 chr6:26056929-26057009 1.0000 80 chr12:69753448-69753528 1.0000 80 chr1:150898741-150898821 1.0000 80 chr16:2009437-2009517 1.0000 80 chr11:62446566-62446646 1.0000 80 chr1:161736028-161736108 1.0000 80 chr19:9420457-9420537 1.0000 80 chr11:116643667-11664374 1.0000 80 chr19:39971318-39971398 1.0000 80 chr16:791029-791109 1.0000 80 chr7:56131912-56131992 1.0000 80 chr19:53073502-53073582 1.0000 80 chr17:80709840-80709920 1.0000 80 chr17:38083857-38083937 1.0000 80 chr2:207630244-207630324 1.0000 80 chr5:52095825-52095905 1.0000 80 chr11:14521415-14521495 1.0000 80 chr3:37284630-37284710 1.0000 80 chr20:3451574-3451654 1.0000 80 chr22:28315376-28315456 1.0000 80 chr15:55611333-55611413 1.0000 80 chr11:842781-842861 1.0000 80 chr13:34392130-34392210 1.0000 80 chr2:74710061-74710141 1.0000 80 chr19:16308588-16308668 1.0000 80 chr22:21959252-21959332 1.0000 80 chr13:103498142-10349822 1.0000 80 chr7:100303650-100303730 1.0000 80 chr20:35233970-35234050 1.0000 80 chr10:79789280-79789360 1.0000 80 chr16:90038932-90039012 1.0000 80 chr1:150241411-150241491 1.0000 80 chr5:98264793-98264873 1.0000 80 chr1:170043847-170043927 1.0000 80 chr1:91966392-91966472 1.0000 80 chr17:72772503-72772583 1.0000 80 chr7:6746586-6746666 1.0000 80 chr2:232826336-232826416 1.0000 80 chr11:74303512-74303592 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_POU5F1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/POU5F1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.168 C 0.331 G 0.334 T 0.167 Background letter frequencies (from file dataset with add-one prior applied): A 0.168 C 0.331 G 0.334 T 0.167 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF GCATGCGC MEME-1 width = 8 sites = 141 llr = 996 E-value = 2.6e-073 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::71:::: pos.-specific C :a21:a:a probability G a:12a:9: matrix T :::6::1: bits 2.6 2.3 2.1 1.8 Relative 1.5 ** Entropy 1.3 ** **** (10.2 bits) 1.0 *** **** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel GCATGCGC consensus CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:6746586-6746666 6 3.79e-05 GGCGC GCATGCGC GAACACGCAC chr1:170043847-170043927 8 3.79e-05 TCACGAC GCATGCGC TTGCTCTGCA chr16:90038932-90039012 67 3.79e-05 CTCCCATTGC GCATgcgc gcgccc chr7:56131912-56131992 44 3.79e-05 GCATGAGGGC GCATGCGC AGCGGGGCCG chr16:791029-791109 49 3.79e-05 CCCCCAGGAC GCATGCGC ACCTCGTCCC chr19:9420457-9420537 52 3.79e-05 GTCGACTCGC GCATGCGC AGAAGCACAC chr19:44100404-44100484 54 3.79e-05 GCCTACCCAC GCATGCGC AAAAGGCTTA chr19:42721927-42722007 5 3.79e-05 CGGC GCATGCGC AGAACGAGGC chr5:77590520-77590600 49 3.79e-05 CACCCCCTGC GCATGCGC AGTGTGCAGG chr5:42909091-42909171 23 3.79e-05 ttggtcctgc gcatgcgc agttcacaat chr6:20534644-20534724 36 3.79e-05 CCGTCGCTGA GCATGCGC AAATAAACGT chr1:21113283-21113363 24 3.79e-05 GGGCCTCGGA GCATGCGC AGCCCTCAGC chr14:102771499-10277157 26 3.79e-05 TGTCGCCTGC GCATGCGC AAGATGCCCC chr16:66586403-66586483 61 3.79e-05 GGCGCCGTGC GCATGCGC GCAAGAGAGC chr21:33651405-33651485 59 3.79e-05 CCTCTAGTGC GCATGCGC GCCGTGCGGC chr19:633553-633633 1 3.79e-05 . GCATGCGC CCGCGCCGCC chr19:35615529-35615609 51 3.79e-05 GCGGCCGCAC GCATGCGC ACAAGCAGCA chr22:21356068-21356148 16 3.79e-05 AACAACTAGC GCATGCGC ACGTGAGCCC chr19:2328604-2328684 22 3.79e-05 TCCCCCACGC GCATGCGC GGCGCATGCG chr17:8103560-8103640 6 3.79e-05 aacga gcatgcgc tggacttcgg chr12:54673904-54673984 65 3.79e-05 CGCCCACTAC GCATGCGC AAAGCTAG chr11:134094417-13409449 30 3.79e-05 CTCTCCCTGC GCATGCGC AGCGAGCTCT chr16:4401307-4401387 53 3.79e-05 ACGGCGCTGG GCATGCGC ATTGCCTCAG chr1:167189761-167189841 67 3.79e-05 AGAAAGGCGC GCATGCGC AGAGCC chr19:40023479-40023559 25 3.79e-05 CGAGACCTGC GCATGCGC GAGTCTCAGT chr4:54243757-54243837 53 3.79e-05 GGTCTCCTGC GCATGCGC AGACGGACCT chr7:6388635-6388715 55 3.79e-05 GGTAAGACGC GCATGCGC GGGAGAGGAG chr13:27998646-27998726 52 3.79e-05 ATCTCCCGGA GCATGCGC AGCAGCGGCG chr9:124922044-124922124 11 3.79e-05 CGGCGCCTGC GCATGCGC ATCCGGCAAC chr17:47754911-47754991 66 3.79e-05 TCACACTCGC GCATGCGC AGTCACC chr9:139702289-139702369 23 3.79e-05 AACCGCGTGC GCATGCGC CGAccgcgcg chr11:69490126-69490206 66 3.79e-05 TGTACATGGC GCATGCGC GGCTGCA chr1:231473647-231473727 61 3.79e-05 CGGTTAAAGC GCATGCGC AAGATGAGCT chr15:101142364-10114244 70 3.79e-05 ACCTCCTCCC GCATGCGC AGA chr2:3522672-3522752 42 3.79e-05 CTGCTGCTGA GCATGCGC AGCACACCCC chr9:71394886-71394966 67 3.79e-05 GAAGGGCTAC GCATGCGC AGAGGG chr2:27357490-27357570 17 3.79e-05 CGCGCACTGC GCATGCGC ACCTGTCTCG chr11:70049291-70049371 65 3.79e-05 CGCTAGGGAC GCATGCGC GGGTCCCT chr16:3661574-3661654 34 3.79e-05 GCGCGCCTGC GCATgcgc cgcccgcgcc chr1:91966392-91966472 21 1.14e-04 GAAGTGTTGC GCAGGCGC ATCCGATCGA chr22:22307274-22307354 4 1.14e-04 cgc gcAGGCGC AGTCGGGCCT chr5:218317-218397 52 1.14e-04 GGCGTGGTGC GCAGGCGC GGTATCCCCC chr3:14166395-14166475 55 1.14e-04 TTTGCAGTGC GCAGGCGC ATCAATGAGG chr19:531609-531689 56 1.14e-04 GCCGCGGAGC GCAGGCGC AGTCGGGGCC chr19:11071371-11071451 65 1.14e-04 CGAAGCGTGC GCAGGCGC GGGGCCAT chr1:161129195-161129275 61 1.14e-04 GTGTGGATGC GCAGGCGC TTTGAGAGAC chrX:47863426-47863506 70 1.14e-04 GGGCCGCAGC GCAGGCGC AGA chr11:1330893-1330973 62 1.14e-04 CCAGGGTAGG GCAGGCGC AGCCTCTCGC chr16:80574779-80574859 68 1.14e-04 TCGCGAGCGC GCAGGCGC AGCCC chrX:152864754-152864834 49 1.14e-04 AGGCGCAGGC GCAGGCGC AGAGGCCGAC chr8:117887101-117887181 48 1.14e-04 AAGGAGCGGC GCAGGCGC AATGACTATT chr16:188729-188809 4 1.14e-04 ggc gcaggcgc aggcAGCGGA chr13:45694537-45694617 67 1.14e-04 GTAGCAGTGC GCAGGCGC AGTCCC chr20:34042597-34042677 29 1.14e-04 GGAGCTGTGC GCAGGCGC ACCTAGAACC chr9:140513308-140513388 68 1.14e-04 gggcgcaggc gcaggcgc agACG chr19:7968707-7968787 47 1.14e-04 TCATCCGGGC GCAGGCGC AGTGCGGTGT chr10:134145576-13414565 5 1.14e-04 GCGC GCAGGCGC ACCACACCCC chr17:27278634-27278714 67 1.14e-04 GAGGTCTCGC GCAGGCGC TTGAGA chr19:39138221-39138301 44 1.14e-04 cgggcagtgc gcaggcgc gggcggaggg chr19:19144357-19144437 8 1.14e-04 GCGCCGC GCAGGCGC AAGCCGCCGC chr16:53468299-53468379 67 1.14e-04 TTgcggcggc gcaggcgc ggtgcg chr19:16308588-16308668 69 2.07e-04 TCCGTCCTGC GCCTGCGC ATTC chr5:52095825-52095905 14 2.07e-04 AGCTTAGTGC GCCTGCGC ACGCGCGAAC chr12:69753448-69753528 49 2.07e-04 AGCCCGTTGC GCCTGCGC GCGGTGCGGC chr9:130965527-130965607 26 2.07e-04 CCCGGACGGC GCCTGCGC ACGGCGGCCG chr21:46293764-46293844 38 2.07e-04 GGCTCAGTGC GCCTgcgc ggcgcggatg chr10:124639141-12463922 8 2.07e-04 CCAGTGC GCATGCTC CGCTCTTTAG chr16:30546306-30546386 27 2.07e-04 AACCAGCCGC GCATGCTC CGGCCCCGCC chr6:160182939-160183019 20 2.07e-04 ccggccTTGC GCCTGCGC ACAGTGGGAT chr20:30539843-30539923 18 2.07e-04 CTTCCGGCGC GCCTGCGC AGTTAAAAGA chr17:27169817-27169897 53 2.07e-04 GGCCGCACGC GCCTGCGC AGCCCCTGCC chr19:51162305-51162385 51 2.07e-04 GTCCGGCGGC GCATGCTC GAGGCCCTGG chr3:52232040-52232120 52 2.07e-04 TACGCGGCGC GCCTGCGC AGAAGAAGGC chr5:130500969-130501049 19 2.07e-04 GCGCAGCCAA GCCTGCGC AGGTGCCCCG chr7:6629545-6629625 65 2.07e-04 CTAGGCCGCG GCCTGCGC TTGGCCCC chr2:242576994-242577074 29 2.07e-04 CGTCTTCGCC GCCTGCGC CGGCACACCT chr7:149423-149503 47 2.07e-04 tcctctctgc gcctgcgc AGAGGCCACC chr21:48055462-48055542 50 2.07e-04 TTAGGACTGC GCCTgcgc ggggcgccgg chr20:33735133-33735213 29 2.07e-04 GCGCCACTGC GCCTGCGC GCTGAGAAAT chr12:13080578-13080658 4 2.07e-04 tgc gcatgcTC CCCTCCCAGG chr19:6199604-6199684 15 2.07e-04 accctcttgc gcctgcgc gccacttatt chr21:35747699-35747779 12 2.07e-04 GGCCCACTGC GCCTGCGC ACGGAGTAGT chr19:18794367-18794447 1 2.07e-04 . gcctgcgc cgcgctcacg chr18:10525879-10525959 10 2.07e-04 ACGCGCTGC GCCTGCGC AATGTCTCTT chr7:6487579-6487659 26 2.07e-04 GGGGACCTGC GCATGCTC ACGCTGAGGC chrX:40506832-40506912 54 2.07e-04 CGACGCCTGC GCCTGCGC GGCGCGGTGC chr5:98264793-98264873 45 2.83e-04 GCGAGTGCGC GCACGCGC ACGAATGGGA chr20:3451574-3451654 23 2.83e-04 acgtactcgc gcacgcgc gcGCCGGCCC chr17:80709840-80709920 15 2.83e-04 GTCCTCAAGT GCACGCGC CGTCCCGCGC chr3:47555242-47555322 15 2.83e-04 GGACCGCTGC GCACGCGC GTAGACGTCC chr1:16971194-16971274 58 2.83e-04 CTCCAGCCGC GCACGCGC ACCGGCCCGC chr5:1345210-1345290 53 2.83e-04 CCGCTGCCGC GCACGCGC ATCCAGGATG chr17:41116478-41116558 2 2.83e-04 C GCACGCGC AGAGAAGCCT chr11:65029258-65029338 37 2.83e-04 CCGCTGATGC GCACGCGC CCTGGGCCGC chr17:18087021-18087101 61 2.83e-04 CGGCCTGCAC GCACGCGC ATGCCCGTAG chr13:79233275-79233355 48 2.83e-04 CCAAGACTGG GCACGCGC GGGCCGGCTA chr12:120554665-12055474 63 2.83e-04 CCCGGGTCGC GCACGCGC CCTGACGGAG chr22:32808247-32808327 29 3.21e-04 ATGAGCAACG GCAAGCGC CGAGGCTCAA chr1:176176691-176176771 65 3.21e-04 GAATATCGGC GCAAGCGC GGAGTAGC chr3:37284630-37284710 36 3.59e-04 GGCCGAGCGC GCATGTGC GGGACCCGAC chr6:41040311-41040391 26 3.59e-04 CGCCGCCCGC GCATGCGT AACGAAACTG chr2:71558849-71558929 45 3.59e-04 TGGGAGGCGC GCATGCGT GCAGCTCTTT chr6:109169568-109169648 28 3.59e-04 GAGCTTCTAC GCATGCGT TGGCGGGACC chr4:6675612-6675692 27 3.59e-04 CATGGGgtgc gcatgcgt gcgggggggt chr10:27389434-27389514 67 3.59e-04 TGCTCCATGC GCATGTGC AAGGCC chr11:111742264-11174234 46 3.78e-04 AAAGACCTTG ACATGCGC AGAAAATACT chr12:27090949-27091029 9 4.72e-04 gggctcgc gcgtgcgc acagcgcTCT chr2:33824377-33824457 49 4.72e-04 CATGTCCGGA GCGTGCGC AAGAAACTTG chr10:16859664-16859744 2 4.72e-04 C GCGTGCGC AGTAGACTTG chr7:149570987-149571067 25 4.72e-04 CAGGAGATGC GCGTGCGC GGCCCGGCCC chr15:89010887-89010967 5 6.60e-04 CGGC GCCGGCGC AGCTGTGACT chr17:6544236-6544316 56 6.60e-04 GCTGGCTTCC GCAGGCTC CGCCCTCTCT chr19:2236249-2236329 62 6.60e-04 TCAGGCTGGG GCCGGCGC CAAAAATGTC chr15:41099640-41099720 64 6.60e-04 CGTGAGGACT GCAGGCTC CGAGCGGCG chr18:55297442-55297522 64 6.60e-04 GGCACTTGAC GCCGGCGC CGCCATGTT chr20:35580159-35580239 10 6.60e-04 GCCTCCTGC GCAGGCTC ACTGACAGTT chr11:14521415-14521495 71 6.97e-04 TTTGTGCAGC GCTTGCGC GC chr10:79789280-79789360 51 9.58e-04 TCCGCTACTC GCCCGCGC GTCTGTCTGT chr2:228189913-228189993 65 9.58e-04 GAAGGGGCCA GCCCGCGC CTTTCGCG chr22:28315376-28315456 67 1.13e-03 CTGCGGCTGC GCAAGCTC GACGCG chr16:2009437-2009517 66 1.13e-03 GCATCGCGGC GCCAGCGC GCAGACG chr7:5229798-5229878 60 1.13e-03 GCGGGGCCGC GCAGGCGT ACCGGGTGCC chr17:57970328-57970408 30 1.13e-03 GCATGTTTCT GCCAGCGC CTGGATCCTG chr7:100303650-100303730 6 1.50e-03 CTCGC GCAGTCGC CCTTGCGCTC chr16:19535069-19535149 54 1.50e-03 GTCCTCCATC GCGGGCGC GCAATGCACC chr20:42939796-42939876 60 1.50e-03 CTTCGCCCGG ACCTGCGC CTCCACCTCC chr5:154317791-154317871 10 1.50e-03 CCTTCTCGG GCAGTCGC TACGGTGCGC chr6:32097825-32097905 45 1.50e-03 GTCAATAAGT ACCTGCGC GGCCAAAGTG chr16:3550882-3550962 31 1.57e-03 CCGTGCGTAT GCACGTGC CGCCGCGTCT chrX:119737680-119737760 53 1.61e-03 CGTAACTGAC GCAAGTGC CATAAATGCT chr14:54976519-54976599 25 1.61e-03 AGAACCCCAG GCAAGTGC GGACCTACAA chr12:132413736-13241381 55 1.81e-03 TTCCACTTCC GCCTTCGC CCACGTGGTC chr1:202858270-202858350 28 1.81e-03 TATTCACTGC GCTGGCGC GGCTTGGCAG chr19:52490099-52490179 61 1.83e-03 AAGAGCAAGG ACAAGCGC ATTTACGGCA chr17:72772503-72772583 39 2.19e-03 CATGCTGACG GCAGCCGC CAGGCCCCAA chr1:24127347-24127427 56 2.19e-03 AGACTGCGCA GCGCGCGC CCGCGGAAGG chr19:36605783-36605863 14 2.19e-03 AGCCTTCCGC GCTTGCTC CGCCGCGCTA chr9:131038460-131038540 72 2.19e-03 TTCCTTGGGT GCGCGCGC A chr8:143484660-143484740 41 2.19e-03 CTCTGCGGGT GCGCGCGC GAGTCGGCTG chr2:75873828-75873908 24 2.19e-03 TTGTCCCATA GCAGCCGC CATATGGTGG chr19:7985130-7985210 31 2.47e-03 ACGCGCGTCC GCCTCCGC GCGGTTCTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:6746586-6746666 3.8e-05 5_[+1]_67 chr1:170043847-170043927 3.8e-05 7_[+1]_65 chr16:90038932-90039012 3.8e-05 66_[+1]_6 chr7:56131912-56131992 3.8e-05 43_[+1]_29 chr16:791029-791109 3.8e-05 48_[+1]_24 chr19:9420457-9420537 3.8e-05 51_[+1]_21 chr19:44100404-44100484 3.8e-05 53_[+1]_19 chr19:42721927-42722007 3.8e-05 4_[+1]_68 chr5:77590520-77590600 3.8e-05 48_[+1]_24 chr5:42909091-42909171 3.8e-05 22_[+1]_50 chr6:20534644-20534724 3.8e-05 35_[+1]_37 chr1:21113283-21113363 3.8e-05 23_[+1]_49 chr14:102771499-10277157 3.8e-05 25_[+1]_47 chr16:66586403-66586483 3.8e-05 60_[+1]_12 chr21:33651405-33651485 3.8e-05 58_[+1]_14 chr19:633553-633633 3.8e-05 [+1]_72 chr19:35615529-35615609 3.8e-05 50_[+1]_22 chr22:21356068-21356148 3.8e-05 15_[+1]_57 chr19:2328604-2328684 3.8e-05 21_[+1]_51 chr17:8103560-8103640 3.8e-05 5_[+1]_67 chr12:54673904-54673984 3.8e-05 64_[+1]_8 chr11:134094417-13409449 3.8e-05 29_[+1]_43 chr16:4401307-4401387 3.8e-05 52_[+1]_20 chr1:167189761-167189841 3.8e-05 66_[+1]_6 chr19:40023479-40023559 3.8e-05 24_[+1]_48 chr4:54243757-54243837 3.8e-05 52_[+1]_20 chr7:6388635-6388715 3.8e-05 54_[+1]_18 chr13:27998646-27998726 3.8e-05 51_[+1]_21 chr9:124922044-124922124 3.8e-05 10_[+1]_62 chr17:47754911-47754991 3.8e-05 65_[+1]_7 chr9:139702289-139702369 3.8e-05 22_[+1]_50 chr11:69490126-69490206 3.8e-05 65_[+1]_7 chr1:231473647-231473727 3.8e-05 60_[+1]_12 chr15:101142364-10114244 3.8e-05 69_[+1]_3 chr2:3522672-3522752 3.8e-05 41_[+1]_31 chr9:71394886-71394966 3.8e-05 66_[+1]_6 chr2:27357490-27357570 3.8e-05 16_[+1]_56 chr11:70049291-70049371 3.8e-05 64_[+1]_8 chr16:3661574-3661654 3.8e-05 33_[+1]_39 chr1:91966392-91966472 0.00011 20_[+1]_52 chr22:22307274-22307354 0.00011 3_[+1]_69 chr5:218317-218397 0.00011 51_[+1]_21 chr3:14166395-14166475 0.00011 54_[+1]_18 chr19:531609-531689 0.00011 55_[+1]_17 chr19:11071371-11071451 0.00011 64_[+1]_8 chr1:161129195-161129275 0.00011 60_[+1]_12 chrX:47863426-47863506 0.00011 69_[+1]_3 chr11:1330893-1330973 0.00011 61_[+1]_11 chr16:80574779-80574859 0.00011 67_[+1]_5 chrX:152864754-152864834 0.00011 48_[+1]_24 chr8:117887101-117887181 0.00011 47_[+1]_25 chr16:188729-188809 0.00011 3_[+1]_69 chr13:45694537-45694617 0.00011 66_[+1]_6 chr20:34042597-34042677 0.00011 28_[+1]_44 chr9:140513308-140513388 0.00011 67_[+1]_5 chr19:7968707-7968787 0.00011 46_[+1]_26 chr10:134145576-13414565 0.00011 4_[+1]_68 chr17:27278634-27278714 0.00011 66_[+1]_6 chr19:39138221-39138301 0.00011 43_[+1]_29 chr19:19144357-19144437 0.00011 7_[+1]_65 chr16:53468299-53468379 0.00011 66_[+1]_6 chr19:16308588-16308668 0.00021 68_[+1]_4 chr5:52095825-52095905 0.00021 13_[+1]_59 chr12:69753448-69753528 0.00021 48_[+1]_24 chr9:130965527-130965607 0.00021 25_[+1]_47 chr21:46293764-46293844 0.00021 37_[+1]_35 chr10:124639141-12463922 0.00021 7_[+1]_65 chr16:30546306-30546386 0.00021 26_[+1]_46 chr6:160182939-160183019 0.00021 19_[+1]_53 chr20:30539843-30539923 0.00021 17_[+1]_55 chr17:27169817-27169897 0.00021 52_[+1]_20 chr19:51162305-51162385 0.00021 50_[+1]_22 chr3:52232040-52232120 0.00021 51_[+1]_21 chr5:130500969-130501049 0.00021 18_[+1]_54 chr7:6629545-6629625 0.00021 64_[+1]_8 chr2:242576994-242577074 0.00021 28_[+1]_44 chr7:149423-149503 0.00021 46_[+1]_26 chr21:48055462-48055542 0.00021 49_[+1]_23 chr20:33735133-33735213 0.00021 28_[+1]_44 chr12:13080578-13080658 0.00021 3_[+1]_69 chr19:6199604-6199684 0.00021 14_[+1]_58 chr21:35747699-35747779 0.00021 11_[+1]_61 chr19:18794367-18794447 0.00021 [+1]_72 chr18:10525879-10525959 0.00021 9_[+1]_63 chr7:6487579-6487659 0.00021 25_[+1]_47 chrX:40506832-40506912 0.00021 53_[+1]_19 chr5:98264793-98264873 0.00028 44_[+1]_28 chr20:3451574-3451654 0.00028 22_[+1]_50 chr17:80709840-80709920 0.00028 14_[+1]_58 chr3:47555242-47555322 0.00028 14_[+1]_58 chr1:16971194-16971274 0.00028 57_[+1]_15 chr5:1345210-1345290 0.00028 52_[+1]_20 chr17:41116478-41116558 0.00028 1_[+1]_71 chr11:65029258-65029338 0.00028 36_[+1]_36 chr17:18087021-18087101 0.00028 60_[+1]_12 chr13:79233275-79233355 0.00028 47_[+1]_25 chr12:120554665-12055474 0.00028 62_[+1]_10 chr22:32808247-32808327 0.00032 28_[+1]_44 chr1:176176691-176176771 0.00032 64_[+1]_8 chr3:37284630-37284710 0.00036 35_[+1]_37 chr6:41040311-41040391 0.00036 25_[+1]_47 chr2:71558849-71558929 0.00036 44_[+1]_28 chr6:109169568-109169648 0.00036 27_[+1]_45 chr4:6675612-6675692 0.00036 26_[+1]_46 chr10:27389434-27389514 0.00036 66_[+1]_6 chr11:111742264-11174234 0.00038 45_[+1]_27 chr12:27090949-27091029 0.00047 8_[+1]_64 chr2:33824377-33824457 0.00047 48_[+1]_24 chr10:16859664-16859744 0.00047 1_[+1]_71 chr7:149570987-149571067 0.00047 24_[+1]_48 chr15:89010887-89010967 0.00066 4_[+1]_68 chr17:6544236-6544316 0.00066 55_[+1]_17 chr19:2236249-2236329 0.00066 61_[+1]_11 chr15:41099640-41099720 0.00066 63_[+1]_9 chr18:55297442-55297522 0.00066 63_[+1]_9 chr20:35580159-35580239 0.00066 9_[+1]_63 chr11:14521415-14521495 0.0007 70_[+1]_2 chr10:79789280-79789360 0.00096 50_[+1]_22 chr2:228189913-228189993 0.00096 64_[+1]_8 chr22:28315376-28315456 0.0011 66_[+1]_6 chr16:2009437-2009517 0.0011 65_[+1]_7 chr7:5229798-5229878 0.0011 59_[+1]_13 chr17:57970328-57970408 0.0011 29_[+1]_43 chr7:100303650-100303730 0.0015 5_[+1]_67 chr16:19535069-19535149 0.0015 53_[+1]_19 chr20:42939796-42939876 0.0015 59_[+1]_13 chr5:154317791-154317871 0.0015 9_[+1]_63 chr6:32097825-32097905 0.0015 44_[+1]_28 chr16:3550882-3550962 0.0016 30_[+1]_42 chrX:119737680-119737760 0.0016 52_[+1]_20 chr14:54976519-54976599 0.0016 24_[+1]_48 chr12:132413736-13241381 0.0018 54_[+1]_18 chr1:202858270-202858350 0.0018 27_[+1]_45 chr19:52490099-52490179 0.0018 60_[+1]_12 chr17:72772503-72772583 0.0022 38_[+1]_34 chr1:24127347-24127427 0.0022 55_[+1]_17 chr19:36605783-36605863 0.0022 13_[+1]_59 chr9:131038460-131038540 0.0022 71_[+1]_1 chr8:143484660-143484740 0.0022 40_[+1]_32 chr2:75873828-75873908 0.0022 23_[+1]_49 chr19:7985130-7985210 0.0025 30_[+1]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCATGCGC width=8 seqs=141 chr7:6746586-6746666 ( 6) GCATGCGC 1 chr1:170043847-170043927 ( 8) GCATGCGC 1 chr16:90038932-90039012 ( 67) GCATGCGC 1 chr7:56131912-56131992 ( 44) GCATGCGC 1 chr16:791029-791109 ( 49) GCATGCGC 1 chr19:9420457-9420537 ( 52) GCATGCGC 1 chr19:44100404-44100484 ( 54) GCATGCGC 1 chr19:42721927-42722007 ( 5) GCATGCGC 1 chr5:77590520-77590600 ( 49) GCATGCGC 1 chr5:42909091-42909171 ( 23) GCATGCGC 1 chr6:20534644-20534724 ( 36) GCATGCGC 1 chr1:21113283-21113363 ( 24) GCATGCGC 1 chr14:102771499-10277157 ( 26) GCATGCGC 1 chr16:66586403-66586483 ( 61) GCATGCGC 1 chr21:33651405-33651485 ( 59) GCATGCGC 1 chr19:633553-633633 ( 1) GCATGCGC 1 chr19:35615529-35615609 ( 51) GCATGCGC 1 chr22:21356068-21356148 ( 16) GCATGCGC 1 chr19:2328604-2328684 ( 22) GCATGCGC 1 chr17:8103560-8103640 ( 6) GCATGCGC 1 chr12:54673904-54673984 ( 65) GCATGCGC 1 chr11:134094417-13409449 ( 30) GCATGCGC 1 chr16:4401307-4401387 ( 53) GCATGCGC 1 chr1:167189761-167189841 ( 67) GCATGCGC 1 chr19:40023479-40023559 ( 25) GCATGCGC 1 chr4:54243757-54243837 ( 53) GCATGCGC 1 chr7:6388635-6388715 ( 55) GCATGCGC 1 chr13:27998646-27998726 ( 52) GCATGCGC 1 chr9:124922044-124922124 ( 11) GCATGCGC 1 chr17:47754911-47754991 ( 66) GCATGCGC 1 chr9:139702289-139702369 ( 23) GCATGCGC 1 chr11:69490126-69490206 ( 66) GCATGCGC 1 chr1:231473647-231473727 ( 61) GCATGCGC 1 chr15:101142364-10114244 ( 70) GCATGCGC 1 chr2:3522672-3522752 ( 42) GCATGCGC 1 chr9:71394886-71394966 ( 67) GCATGCGC 1 chr2:27357490-27357570 ( 17) GCATGCGC 1 chr11:70049291-70049371 ( 65) GCATGCGC 1 chr16:3661574-3661654 ( 34) GCATGCGC 1 chr1:91966392-91966472 ( 21) GCAGGCGC 1 chr22:22307274-22307354 ( 4) GCAGGCGC 1 chr5:218317-218397 ( 52) GCAGGCGC 1 chr3:14166395-14166475 ( 55) GCAGGCGC 1 chr19:531609-531689 ( 56) GCAGGCGC 1 chr19:11071371-11071451 ( 65) GCAGGCGC 1 chr1:161129195-161129275 ( 61) GCAGGCGC 1 chrX:47863426-47863506 ( 70) GCAGGCGC 1 chr11:1330893-1330973 ( 62) GCAGGCGC 1 chr16:80574779-80574859 ( 68) GCAGGCGC 1 chrX:152864754-152864834 ( 49) GCAGGCGC 1 chr8:117887101-117887181 ( 48) GCAGGCGC 1 chr16:188729-188809 ( 4) GCAGGCGC 1 chr13:45694537-45694617 ( 67) GCAGGCGC 1 chr20:34042597-34042677 ( 29) GCAGGCGC 1 chr9:140513308-140513388 ( 68) GCAGGCGC 1 chr19:7968707-7968787 ( 47) GCAGGCGC 1 chr10:134145576-13414565 ( 5) GCAGGCGC 1 chr17:27278634-27278714 ( 67) GCAGGCGC 1 chr19:39138221-39138301 ( 44) GCAGGCGC 1 chr19:19144357-19144437 ( 8) GCAGGCGC 1 chr16:53468299-53468379 ( 67) GCAGGCGC 1 chr19:16308588-16308668 ( 69) GCCTGCGC 1 chr5:52095825-52095905 ( 14) GCCTGCGC 1 chr12:69753448-69753528 ( 49) GCCTGCGC 1 chr9:130965527-130965607 ( 26) GCCTGCGC 1 chr21:46293764-46293844 ( 38) GCCTGCGC 1 chr10:124639141-12463922 ( 8) GCATGCTC 1 chr16:30546306-30546386 ( 27) GCATGCTC 1 chr6:160182939-160183019 ( 20) GCCTGCGC 1 chr20:30539843-30539923 ( 18) GCCTGCGC 1 chr17:27169817-27169897 ( 53) GCCTGCGC 1 chr19:51162305-51162385 ( 51) GCATGCTC 1 chr3:52232040-52232120 ( 52) GCCTGCGC 1 chr5:130500969-130501049 ( 19) GCCTGCGC 1 chr7:6629545-6629625 ( 65) GCCTGCGC 1 chr2:242576994-242577074 ( 29) GCCTGCGC 1 chr7:149423-149503 ( 47) GCCTGCGC 1 chr21:48055462-48055542 ( 50) GCCTGCGC 1 chr20:33735133-33735213 ( 29) GCCTGCGC 1 chr12:13080578-13080658 ( 4) GCATGCTC 1 chr19:6199604-6199684 ( 15) GCCTGCGC 1 chr21:35747699-35747779 ( 12) GCCTGCGC 1 chr19:18794367-18794447 ( 1) GCCTGCGC 1 chr18:10525879-10525959 ( 10) GCCTGCGC 1 chr7:6487579-6487659 ( 26) GCATGCTC 1 chrX:40506832-40506912 ( 54) GCCTGCGC 1 chr5:98264793-98264873 ( 45) GCACGCGC 1 chr20:3451574-3451654 ( 23) GCACGCGC 1 chr17:80709840-80709920 ( 15) GCACGCGC 1 chr3:47555242-47555322 ( 15) GCACGCGC 1 chr1:16971194-16971274 ( 58) GCACGCGC 1 chr5:1345210-1345290 ( 53) GCACGCGC 1 chr17:41116478-41116558 ( 2) GCACGCGC 1 chr11:65029258-65029338 ( 37) GCACGCGC 1 chr17:18087021-18087101 ( 61) GCACGCGC 1 chr13:79233275-79233355 ( 48) GCACGCGC 1 chr12:120554665-12055474 ( 63) GCACGCGC 1 chr22:32808247-32808327 ( 29) GCAAGCGC 1 chr1:176176691-176176771 ( 65) GCAAGCGC 1 chr3:37284630-37284710 ( 36) GCATGTGC 1 chr6:41040311-41040391 ( 26) GCATGCGT 1 chr2:71558849-71558929 ( 45) GCATGCGT 1 chr6:109169568-109169648 ( 28) GCATGCGT 1 chr4:6675612-6675692 ( 27) GCATGCGT 1 chr10:27389434-27389514 ( 67) GCATGTGC 1 chr11:111742264-11174234 ( 46) ACATGCGC 1 chr12:27090949-27091029 ( 9) GCGTGCGC 1 chr2:33824377-33824457 ( 49) GCGTGCGC 1 chr10:16859664-16859744 ( 2) GCGTGCGC 1 chr7:149570987-149571067 ( 25) GCGTGCGC 1 chr15:89010887-89010967 ( 5) GCCGGCGC 1 chr17:6544236-6544316 ( 56) GCAGGCTC 1 chr19:2236249-2236329 ( 62) GCCGGCGC 1 chr15:41099640-41099720 ( 64) GCAGGCTC 1 chr18:55297442-55297522 ( 64) GCCGGCGC 1 chr20:35580159-35580239 ( 10) GCAGGCTC 1 chr11:14521415-14521495 ( 71) GCTTGCGC 1 chr10:79789280-79789360 ( 51) GCCCGCGC 1 chr2:228189913-228189993 ( 65) GCCCGCGC 1 chr22:28315376-28315456 ( 67) GCAAGCTC 1 chr16:2009437-2009517 ( 66) GCCAGCGC 1 chr7:5229798-5229878 ( 60) GCAGGCGT 1 chr17:57970328-57970408 ( 30) GCCAGCGC 1 chr7:100303650-100303730 ( 6) GCAGTCGC 1 chr16:19535069-19535149 ( 54) GCGGGCGC 1 chr20:42939796-42939876 ( 60) ACCTGCGC 1 chr5:154317791-154317871 ( 10) GCAGTCGC 1 chr6:32097825-32097905 ( 45) ACCTGCGC 1 chr16:3550882-3550962 ( 31) GCACGTGC 1 chrX:119737680-119737760 ( 53) GCAAGTGC 1 chr14:54976519-54976599 ( 25) GCAAGTGC 1 chr12:132413736-13241381 ( 55) GCCTTCGC 1 chr1:202858270-202858350 ( 28) GCTGGCGC 1 chr19:52490099-52490179 ( 61) ACAAGCGC 1 chr17:72772503-72772583 ( 39) GCAGCCGC 1 chr1:24127347-24127427 ( 56) GCGCGCGC 1 chr19:36605783-36605863 ( 14) GCTTGCTC 1 chr9:131038460-131038540 ( 72) GCGCGCGC 1 chr8:143484660-143484740 ( 41) GCGCGCGC 1 chr2:75873828-75873908 ( 24) GCAGCCGC 1 chr19:7985130-7985210 ( 31) GCCTCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.11624 E= 2.6e-073 -256 -1378 154 -1378 -1378 160 -1378 -1378 207 -59 -256 -298 -156 -146 -43 178 -1378 -396 152 -298 -1378 154 -1378 -224 -1378 -1378 148 -124 -1378 154 -1378 -224 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 141 E= 2.6e-073 0.028369 0.000000 0.971631 0.000000 0.000000 1.000000 0.000000 0.000000 0.702128 0.219858 0.056738 0.021277 0.056738 0.120567 0.248227 0.574468 0.000000 0.021277 0.957447 0.021277 0.000000 0.964539 0.000000 0.035461 0.000000 0.000000 0.929078 0.070922 0.000000 0.964539 0.000000 0.035461 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCATGCGC MEME-1 regular expression -------------------------------------------------------------------------------- GC[AC][TG]GCGC -------------------------------------------------------------------------------- Time 5.08 secs. ******************************************************************************** ******************************************************************************** MOTIF WKTTTGTC MEME-2 width = 8 sites = 23 llr = 221 E-value = 1.5e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6:1:::1: pos.-specific C :::::::a probability G 14:::a1: matrix T 369aa:7: bits 2.6 ** 2.3 ** 2.1 *** 1.8 *** Relative 1.5 *** * Entropy 1.3 * ****** (13.8 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATTTTGTC consensus TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr13:34392130-34392210 12 2.41e-06 GCGGCAGCTG ATTTTGTC TGCACACGGC chr1:161736028-161736108 55 2.41e-06 GTTACGGAGT ATTTTGTC CGCCTGCCGC chr2:75873828-75873908 11 2.41e-06 AGACTTATCC ATTTTGTC CCATAGCAGC chr22:48027363-48027443 16 4.81e-06 gccctccacc tttttgtc ctgttccggc chr2:207024166-207024246 60 9.64e-06 GCATTCGACA AGTTTGTC GGCAATTTCC chr19:52097719-52097799 25 9.64e-06 CTGTAGGCCC AGTTTGTC CGAGAGCCGC chr13:45694537-45694617 27 9.64e-06 CGAAACAGAA AGTTTGTC TGCAACAGCG chr14:54976519-54976599 43 9.64e-06 GGACCTACAA AGTTTGTC CGCTCCGGGG chr10:124768345-12476842 46 1.69e-05 AGGAGGGGCC TGTTTGTC TCTCTTGGGG chr16:3550882-3550962 62 1.69e-05 CTTCGCTTTT TGTTTGTC CCTGACCGTG chr19:7968707-7968787 62 1.69e-05 CGCAGTGCGG TGTTTGTC TGCCGGACTG chr17:42785916-42785996 38 1.93e-05 CGCGAAACTA ATATTGTC CTTCCAAGGA chr1:32573586-32573666 71 1.93e-05 CAGATCCGCC ATATTGTC TA chr2:207630244-207630324 32 2.65e-05 GAACATATGC TTTTTGAC CTTTGAGGGA chr17:80709840-80709920 38 2.65e-05 CGCGCGCGGT ATTTTGGC GGCCGACGCG chr17:29158869-29158949 52 2.65e-05 CGAGGGAGTC ATTTTGGC CCTCTCGGCT chr11:74303512-74303592 40 3.86e-05 CTCCCTGACT AGTTTGAC CCTTCGAGGG chr1:170043847-170043927 67 3.86e-05 GTGGCCTCAG AGTTTGAC GCACCG chr12:132413736-13241381 10 3.86e-05 cccgAATTA GTTTTGTC CGCGCTCGGC chr11:34073847-34073927 31 3.86e-05 CTCGCTGCGC GTTTTGTC CCGCGTCTCG chr20:35233970-35234050 16 4.34e-05 CGTTCTACCA AGATTGTC CCTCCCCTCA chr7:6388635-6388715 36 5.06e-05 GCCACCTTTC TTTTTGGC AGGTAAGACG chr12:54673904-54673984 47 8.43e-05 GACCGGACCT TTTTTCTC CGCCCACTAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr13:34392130-34392210 2.4e-06 11_[+2]_61 chr1:161736028-161736108 2.4e-06 54_[+2]_18 chr2:75873828-75873908 2.4e-06 10_[+2]_62 chr22:48027363-48027443 4.8e-06 15_[+2]_57 chr2:207024166-207024246 9.6e-06 59_[+2]_13 chr19:52097719-52097799 9.6e-06 24_[+2]_48 chr13:45694537-45694617 9.6e-06 26_[+2]_46 chr14:54976519-54976599 9.6e-06 42_[+2]_30 chr10:124768345-12476842 1.7e-05 45_[+2]_27 chr16:3550882-3550962 1.7e-05 61_[+2]_11 chr19:7968707-7968787 1.7e-05 61_[+2]_11 chr17:42785916-42785996 1.9e-05 37_[+2]_35 chr1:32573586-32573666 1.9e-05 70_[+2]_2 chr2:207630244-207630324 2.7e-05 31_[+2]_41 chr17:80709840-80709920 2.7e-05 37_[+2]_35 chr17:29158869-29158949 2.7e-05 51_[+2]_21 chr11:74303512-74303592 3.9e-05 39_[+2]_33 chr1:170043847-170043927 3.9e-05 66_[+2]_6 chr12:132413736-13241381 3.9e-05 9_[+2]_63 chr11:34073847-34073927 3.9e-05 30_[+2]_42 chr20:35233970-35234050 4.3e-05 15_[+2]_57 chr7:6388635-6388715 5.1e-05 35_[+2]_37 chr12:54673904-54673984 8.4e-05 46_[+2]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WKTTTGTC width=8 seqs=23 chr13:34392130-34392210 ( 12) ATTTTGTC 1 chr1:161736028-161736108 ( 55) ATTTTGTC 1 chr2:75873828-75873908 ( 11) ATTTTGTC 1 chr22:48027363-48027443 ( 16) TTTTTGTC 1 chr2:207024166-207024246 ( 60) AGTTTGTC 1 chr19:52097719-52097799 ( 25) AGTTTGTC 1 chr13:45694537-45694617 ( 27) AGTTTGTC 1 chr14:54976519-54976599 ( 43) AGTTTGTC 1 chr10:124768345-12476842 ( 46) TGTTTGTC 1 chr16:3550882-3550962 ( 62) TGTTTGTC 1 chr19:7968707-7968787 ( 62) TGTTTGTC 1 chr17:42785916-42785996 ( 38) ATATTGTC 1 chr1:32573586-32573666 ( 71) ATATTGTC 1 chr2:207630244-207630324 ( 32) TTTTTGAC 1 chr17:80709840-80709920 ( 38) ATTTTGGC 1 chr17:29158869-29158949 ( 52) ATTTTGGC 1 chr11:74303512-74303592 ( 40) AGTTTGAC 1 chr1:170043847-170043927 ( 67) AGTTTGAC 1 chr12:132413736-13241381 ( 10) GTTTTGTC 1 chr11:34073847-34073927 ( 31) GTTTTGTC 1 chr20:35233970-35234050 ( 16) AGATTGTC 1 chr7:6388635-6388715 ( 36) TTTTTGGC 1 chr12:54673904-54673984 ( 47) TTTTTCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.6953 E= 1.5e-005 186 -1117 -194 86 -1117 -1117 38 175 -36 -1117 -1117 238 -1117 -1117 -1117 258 -1117 -1117 -1117 258 -1117 -292 152 -1117 -36 -1117 -136 214 -1117 160 -1117 -1117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 23 E= 1.5e-005 0.608696 0.000000 0.086957 0.304348 0.000000 0.000000 0.434783 0.565217 0.130435 0.000000 0.000000 0.869565 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.043478 0.956522 0.000000 0.130435 0.000000 0.130435 0.739130 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WKTTTGTC MEME-2 regular expression -------------------------------------------------------------------------------- [AT][TG]TTTGTC -------------------------------------------------------------------------------- Time 8.65 secs. ******************************************************************************** ******************************************************************************** MOTIF TGCGCAKG MEME-3 width = 8 sites = 32 llr = 272 E-value = 1.9e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::8:: pos.-specific C ::a:a31: probability G :a:a::49 matrix T a:::::51 bits 2.6 * 2.3 * 2.1 * 1.8 * Relative 1.5 *** ** Entropy 1.3 ****** * (12.3 bits) 1.0 ****** * 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TGCGCATG consensus CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:124639141-12463922 72 1.91e-05 AGTTGGCTTA TGCGCATG C chr19:11071371-11071451 13 1.91e-05 GCGTCCGCTC TGCGCATG CTCCGGGGCG chr17:8103560-8103640 67 1.91e-05 ggcaggccac tgcgcatg cggcaa chr17:57970328-57970408 58 1.91e-05 CCGATAGTTC TGCGCATG TCCACTGCCC chr19:40023479-40023559 73 1.91e-05 TGCCAGAGTG TGCGCATG chr2:33824377-33824457 35 1.91e-05 GCTCCCGCAC TGCGCATG TCCGGAGCGT chr17:47754911-47754991 12 1.91e-05 AACACCGCGA TGCGCATG CGCCCCCGGG chr12:13080578-13080658 40 1.91e-05 GGCCacacac tgcgcatg ctcccctccc chr7:149570987-149571067 73 1.91e-05 CGACTCCTGT TGCGCATG chr7:6746586-6746666 41 5.74e-05 GGGGTGCACA TGCGCAGG AATGCACCGG chr1:170043847-170043927 35 5.74e-05 ACCTCTTGTA TGCGCAGG CTCAGTCTGA chr20:30539843-30539923 43 5.74e-05 AGAACGGTGG TGCGCAGG CTCTAACACT chr16:188729-188809 23 5.74e-05 ggcAGCGGAA TGCGCAGG CGCGGGGCCT chr7:149423-149503 19 5.74e-05 Actctgcgct tgcgcagg agtcgctcgc chr9:140513308-140513388 17 5.74e-05 CTGGTTCCAG TGCGCAGG CGCCGCACCG chr19:39138221-39138301 21 5.74e-05 CTCGGCGCTG TGCgcagg cgcggcgggc chr19:19144357-19144437 36 5.74e-05 CGAGTCCTGG TGCGCAgg cgcgggccgc chr19:16308588-16308668 44 9.51e-05 TACGACGTAA TGCGCCTG CGCACAGTCC chr12:54673904-54673984 14 9.51e-05 GATCCTTCCC TGCGCCTG CGCAACCAAT chr17:27169817-27169897 7 9.51e-05 CGCTCC TGCGCCTG CGCAGCGTGT chr1:231473647-231473727 29 9.51e-05 GCGCAGACAT TGCGCCTG CGCAGCAATG chr21:35747699-35747779 57 9.51e-05 ACCGGCCCAC TGCGCCTG AGCACGTAGC chr6:41040311-41040391 70 1.05e-04 AAGTGGCGCT TGCGCATT AGC chr5:98264793-98264873 64 1.43e-04 CGAATGGGAG TGCGCACG GCGGATGCG chrX:47863426-47863506 9 1.43e-04 GTCGGTTC TGCGCACG CTCAGTGGCG chr9:131038460-131038540 10 1.43e-04 AACAAAAGC TGCGCACG CAACCGCTGT chr10:27389434-27389514 30 1.43e-04 TCCACGCGCG TGCGCACG AAGGCCCAGT chr1:167189761-167189841 30 2.28e-04 AGGGAGCGCA TGCGCCGG CGACACTTCT chr20:34042597-34042677 56 2.28e-04 CAGGTGACCT TGCACATG CGCTGTATGT chr17:18087021-18087101 29 2.28e-04 TGTCTGCGCT TGCGCCGG CGCCTCTGCC chrX:40506832-40506912 30 2.28e-04 CAGCGGCGCC TGCGCCGG CGGCAGCGAC chr14:102771499-10277157 57 2.47e-04 CATGTACGCG TGCGCAGT GCAGCCCGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:124639141-12463922 1.9e-05 71_[+3]_1 chr19:11071371-11071451 1.9e-05 12_[+3]_60 chr17:8103560-8103640 1.9e-05 66_[+3]_6 chr17:57970328-57970408 1.9e-05 57_[+3]_15 chr19:40023479-40023559 1.9e-05 72_[+3] chr2:33824377-33824457 1.9e-05 34_[+3]_38 chr17:47754911-47754991 1.9e-05 11_[+3]_61 chr12:13080578-13080658 1.9e-05 39_[+3]_33 chr7:149570987-149571067 1.9e-05 72_[+3] chr7:6746586-6746666 5.7e-05 40_[+3]_32 chr1:170043847-170043927 5.7e-05 34_[+3]_38 chr20:30539843-30539923 5.7e-05 42_[+3]_30 chr16:188729-188809 5.7e-05 22_[+3]_50 chr7:149423-149503 5.7e-05 18_[+3]_54 chr9:140513308-140513388 5.7e-05 16_[+3]_56 chr19:39138221-39138301 5.7e-05 20_[+3]_52 chr19:19144357-19144437 5.7e-05 35_[+3]_37 chr19:16308588-16308668 9.5e-05 43_[+3]_29 chr12:54673904-54673984 9.5e-05 13_[+3]_59 chr17:27169817-27169897 9.5e-05 6_[+3]_66 chr1:231473647-231473727 9.5e-05 28_[+3]_44 chr21:35747699-35747779 9.5e-05 56_[+3]_16 chr6:41040311-41040391 0.0001 69_[+3]_3 chr5:98264793-98264873 0.00014 63_[+3]_9 chrX:47863426-47863506 0.00014 8_[+3]_64 chr9:131038460-131038540 0.00014 9_[+3]_63 chr10:27389434-27389514 0.00014 29_[+3]_43 chr1:167189761-167189841 0.00023 29_[+3]_43 chr20:34042597-34042677 0.00023 55_[+3]_17 chr17:18087021-18087101 0.00023 28_[+3]_44 chrX:40506832-40506912 0.00023 29_[+3]_43 chr14:102771499-10277157 0.00025 56_[+3]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCGCAKG width=8 seqs=32 chr10:124639141-12463922 ( 72) TGCGCATG 1 chr19:11071371-11071451 ( 13) TGCGCATG 1 chr17:8103560-8103640 ( 67) TGCGCATG 1 chr17:57970328-57970408 ( 58) TGCGCATG 1 chr19:40023479-40023559 ( 73) TGCGCATG 1 chr2:33824377-33824457 ( 35) TGCGCATG 1 chr17:47754911-47754991 ( 12) TGCGCATG 1 chr12:13080578-13080658 ( 40) TGCGCATG 1 chr7:149570987-149571067 ( 73) TGCGCATG 1 chr7:6746586-6746666 ( 41) TGCGCAGG 1 chr1:170043847-170043927 ( 35) TGCGCAGG 1 chr20:30539843-30539923 ( 43) TGCGCAGG 1 chr16:188729-188809 ( 23) TGCGCAGG 1 chr7:149423-149503 ( 19) TGCGCAGG 1 chr9:140513308-140513388 ( 17) TGCGCAGG 1 chr19:39138221-39138301 ( 21) TGCGCAGG 1 chr19:19144357-19144437 ( 36) TGCGCAGG 1 chr19:16308588-16308668 ( 44) TGCGCCTG 1 chr12:54673904-54673984 ( 14) TGCGCCTG 1 chr17:27169817-27169897 ( 7) TGCGCCTG 1 chr1:231473647-231473727 ( 29) TGCGCCTG 1 chr21:35747699-35747779 ( 57) TGCGCCTG 1 chr6:41040311-41040391 ( 70) TGCGCATT 1 chr5:98264793-98264873 ( 64) TGCGCACG 1 chrX:47863426-47863506 ( 9) TGCGCACG 1 chr9:131038460-131038540 ( 10) TGCGCACG 1 chr10:27389434-27389514 ( 30) TGCGCACG 1 chr1:167189761-167189841 ( 30) TGCGCCGG 1 chr20:34042597-34042677 ( 56) TGCACATG 1 chr17:18087021-18087101 ( 29) TGCGCCGG 1 chrX:40506832-40506912 ( 30) TGCGCCGG 1 chr14:102771499-10277157 ( 57) TGCGCAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.89106 E= 1.9e-001 -1164 -1164 -1164 258 -1164 -1164 158 -1164 -1164 160 -1164 -1164 -242 -1164 154 -1164 -1164 160 -1164 -1164 216 -40 -1164 -1164 -1164 -140 17 158 -1164 -1164 149 -142 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 32 E= 1.9e-001 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.031250 0.000000 0.968750 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.250000 0.000000 0.000000 0.000000 0.125000 0.375000 0.500000 0.000000 0.000000 0.937500 0.062500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCGCAKG MEME-3 regular expression -------------------------------------------------------------------------------- TGCGC[AC][TG]G -------------------------------------------------------------------------------- Time 12.18 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGMCAAA MEME-4 width = 8 sites = 24 llr = 209 E-value = 1.3e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 2115:aaa pos.-specific C ::33a::: probability G 896::::: matrix T :::2:::: bits 2.6 ** 2.3 *** 2.1 *** 1.8 *** Relative 1.5 **** Entropy 1.3 * **** (12.6 bits) 1.0 ** **** 0.8 ** ***** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel GGGACAAA consensus A CC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:150241411-150241491 6 9.82e-06 AAGAG GGGACAAA TCCCGGCCGC chr11:116643667-11664374 49 9.82e-06 GTCGGCGCTG GGGACAAA ATGCCTCAAC chr1:165600137-165600217 18 9.82e-06 GGCTCTGCTG GGGACAAA TTATTCACGT chr17:41116478-41116558 42 9.82e-06 AGAGCGACGT GGGACAAA CGTCATCAAG chr11:111742264-11174234 30 9.82e-06 TGTCCGCCGA GGGACAAA AGACCTTGAC chr17:2615133-2615213 15 9.82e-06 CGGCCCGCGA GGGACAAA ACGCGCCGCG chr1:24127347-24127427 18 1.48e-05 GGAGGGCGGG AGGACAAA AGGCCTCCGC chr9:125590948-125591028 42 2.94e-05 GTCCTACCTT GGAACAAA ACACCTCGAC chrX:30907515-30907595 12 2.94e-05 TCGCTCGCCA GGCACAAA GATGGCGCCG chr2:110970105-110970185 39 4.42e-05 CGCGGCGGCG GGGTCAAA AGGCGCCGCG chr17:27278634-27278714 37 4.42e-05 CCAGCGCACT GAGACAAA AGGGCGGGAC chr10:30638287-30638367 31 4.42e-05 GAAGCCTCGA GGGTCAAA CTAGGCGAAA chr1:16971194-16971274 15 6.35e-05 CGTCCGTTCA GGGCCAAA TCACGCGCAC chr12:110906112-11090619 43 6.35e-05 GGCAGCCCGC GGGCCAAA TCCCGTGAGA chr15:55611333-55611413 42 8.80e-05 CTGCTCTCAA AGGCCAAA CTTAATGGAT chr1:180123601-180123681 58 8.80e-05 GGGCCGTGAG AGGCCAAA CAACCTCCGC chr20:3140541-3140621 31 1.10e-04 ATGCGGCCGA GGCTCAAA AGACTCTGTC chr22:32808247-32808327 40 1.10e-04 CAAGCGCCGA GGCTCAAA ATTCTTCAGG chr8:133687827-133687907 51 1.39e-04 CGGCCGCGCG GGACCAAA ACAAGCCGCG chr11:69490126-69490206 42 1.39e-04 CACGCGGGAG GGCCCAAA GCAGCCTGTA chr11:18610240-18610320 44 1.39e-04 AAGCCGCTGA GGACCAAA CTTCCCGGCG chr6:26056929-26057009 6 1.65e-04 CCACA AACACAAA AACAACGCGT chr15:101142364-10114244 8 1.65e-04 TTGAGGG AACACAAA TGCCCGCTCT chr9:124855609-124855689 4 1.96e-04 GAA GGGACAAT CGCCGGCCGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:150241411-150241491 9.8e-06 5_[+4]_67 chr11:116643667-11664374 9.8e-06 48_[+4]_24 chr1:165600137-165600217 9.8e-06 17_[+4]_55 chr17:41116478-41116558 9.8e-06 41_[+4]_31 chr11:111742264-11174234 9.8e-06 29_[+4]_43 chr17:2615133-2615213 9.8e-06 14_[+4]_58 chr1:24127347-24127427 1.5e-05 17_[+4]_55 chr9:125590948-125591028 2.9e-05 41_[+4]_31 chrX:30907515-30907595 2.9e-05 11_[+4]_61 chr2:110970105-110970185 4.4e-05 38_[+4]_34 chr17:27278634-27278714 4.4e-05 36_[+4]_36 chr10:30638287-30638367 4.4e-05 30_[+4]_42 chr1:16971194-16971274 6.4e-05 14_[+4]_58 chr12:110906112-11090619 6.4e-05 42_[+4]_30 chr15:55611333-55611413 8.8e-05 41_[+4]_31 chr1:180123601-180123681 8.8e-05 57_[+4]_15 chr20:3140541-3140621 0.00011 30_[+4]_42 chr22:32808247-32808327 0.00011 39_[+4]_33 chr8:133687827-133687907 0.00014 50_[+4]_22 chr11:69490126-69490206 0.00014 41_[+4]_31 chr11:18610240-18610320 0.00014 43_[+4]_29 chr6:26056929-26057009 0.00016 5_[+4]_67 chr15:101142364-10114244 0.00016 7_[+4]_65 chr9:124855609-124855689 0.0002 3_[+4]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGMCAAA width=8 seqs=24 chr1:150241411-150241491 ( 6) GGGACAAA 1 chr11:116643667-11664374 ( 49) GGGACAAA 1 chr1:165600137-165600217 ( 18) GGGACAAA 1 chr17:41116478-41116558 ( 42) GGGACAAA 1 chr11:111742264-11174234 ( 30) GGGACAAA 1 chr17:2615133-2615213 ( 15) GGGACAAA 1 chr1:24127347-24127427 ( 18) AGGACAAA 1 chr9:125590948-125591028 ( 42) GGAACAAA 1 chrX:30907515-30907595 ( 12) GGCACAAA 1 chr2:110970105-110970185 ( 39) GGGTCAAA 1 chr17:27278634-27278714 ( 37) GAGACAAA 1 chr10:30638287-30638367 ( 31) GGGTCAAA 1 chr1:16971194-16971274 ( 15) GGGCCAAA 1 chr12:110906112-11090619 ( 43) GGGCCAAA 1 chr15:55611333-55611413 ( 42) AGGCCAAA 1 chr1:180123601-180123681 ( 58) AGGCCAAA 1 chr20:3140541-3140621 ( 31) GGCTCAAA 1 chr22:32808247-32808327 ( 40) GGCTCAAA 1 chr8:133687827-133687907 ( 51) GGACCAAA 1 chr11:69490126-69490206 ( 42) GGCCCAAA 1 chr11:18610240-18610320 ( 44) GGACCAAA 1 chr6:26056929-26057009 ( 6) AACACAAA 1 chr15:101142364-10114244 ( 8) AACACAAA 1 chr9:124855609-124855689 ( 4) GGGACAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.0167 E= 1.3e+003 31 -1123 124 -1123 -42 -1123 139 -1123 -42 -40 90 -1123 169 -18 -1123 -1 -1123 160 -1123 -1123 257 -1123 -1123 -1123 257 -1123 -1123 -1123 251 -1123 -1123 -200 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 24 E= 1.3e+003 0.208333 0.000000 0.791667 0.000000 0.125000 0.000000 0.875000 0.000000 0.125000 0.250000 0.625000 0.000000 0.541667 0.291667 0.000000 0.166667 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.958333 0.000000 0.000000 0.041667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGMCAAA MEME-4 regular expression -------------------------------------------------------------------------------- [GA]G[GC][AC]CAAA -------------------------------------------------------------------------------- Time 15.72 secs. ******************************************************************************** ******************************************************************************** MOTIF WWGTBTYT MEME-5 width = 8 sites = 20 llr = 183 E-value = 1.0e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 Description -------------------------------------------------------------------------------- Simplified A 762::::: pos.-specific C ::::5:4: probability G ::6:3::: matrix T 443a3a7a bits 2.6 * * * 2.3 * * * 2.1 * * * 1.8 * * * Relative 1.5 ** * * * Entropy 1.3 ** * *** (13.2 bits) 1.0 ** * *** 0.8 ** * *** 0.5 **** *** 0.3 ******** 0.0 -------- Multilevel AAGTCTTT consensus TTT G C sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:30640818-30640898 60 5.48e-06 AACTCGGGGT AATTCTTT TTTCTTCATT chr12:124068918-12406899 3 7.31e-06 AA AAATTTTT GGTCCTTCGG chr14:65453501-65453581 59 7.31e-06 TTCGCGTTCA AAATCTTT TTGCCTCTAT chr22:32808247-32808327 61 1.09e-05 CTTCAGGCCA ATGTCTTT CCTCTGGTTA chr17:6544236-6544316 32 1.64e-05 GAGGCTCCCG TAGTCTTT AGCGGCGCTG chr11:124543689-12454376 71 1.64e-05 TCGGCCGCCG TAGTTTTT TT chr19:52097719-52097799 43 2.07e-05 CGAGAGCCGC AAGTGTTT CGGGACGACG chr7:100034292-100034372 5 2.07e-05 GCCG AAGTGTTT TTGAGCTGGG chr19:52490099-52490179 41 2.68e-05 GGAGAACCTA AAATGTTT AAAAGAGCAA chr1:161736028-161736108 15 3.04e-05 CAAAAGTAGT TTGTCTTT ACTAGGCCAC chr10:104613973-10461405 14 3.04e-05 TCCGCTTTGC TTGTCTTT TGGCCCCGGC chr8:117887101-117887181 69 3.46e-05 GACTATTTCC TTTTCTTT GGAA chr2:85843159-85843239 19 5.21e-05 ACCGCCCACA AATTTTCT GCAGCGTGAT chr10:104192450-10419253 2 5.21e-05 T AATTCTCT AACGTCCCAG chr17:57970328-57970408 22 6.78e-05 TGTTTTGCGC ATGTTTCT GCCAGCGCCT chr1:202858270-202858350 73 6.78e-05 GACGGTCACT ATGTCTCT chr18:10525879-10525959 19 6.78e-05 CGCCTGCGCA ATGTCTCT TTGCGGGGCG chr17:38083857-38083937 65 7.98e-05 CTGGGAGTTG TAGTTTCT TCCGCTGG chr2:15701444-15701524 62 7.98e-05 CCGCGGCCGC TTTTGTTT CACGGCAAGG chr19:2236249-2236329 73 1.02e-04 CCGGCGCCAA AAATGTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:30640818-30640898 5.5e-06 59_[+5]_13 chr12:124068918-12406899 7.3e-06 2_[+5]_70 chr14:65453501-65453581 7.3e-06 58_[+5]_14 chr22:32808247-32808327 1.1e-05 60_[+5]_12 chr17:6544236-6544316 1.6e-05 31_[+5]_41 chr11:124543689-12454376 1.6e-05 70_[+5]_2 chr19:52097719-52097799 2.1e-05 42_[+5]_30 chr7:100034292-100034372 2.1e-05 4_[+5]_68 chr19:52490099-52490179 2.7e-05 40_[+5]_32 chr1:161736028-161736108 3e-05 14_[+5]_58 chr10:104613973-10461405 3e-05 13_[+5]_59 chr8:117887101-117887181 3.5e-05 68_[+5]_4 chr2:85843159-85843239 5.2e-05 18_[+5]_54 chr10:104192450-10419253 5.2e-05 1_[+5]_71 chr17:57970328-57970408 6.8e-05 21_[+5]_51 chr1:202858270-202858350 6.8e-05 72_[+5] chr18:10525879-10525959 6.8e-05 18_[+5]_54 chr17:38083857-38083937 8e-05 64_[+5]_8 chr2:15701444-15701524 8e-05 61_[+5]_11 chr19:2236249-2236329 0.0001 72_[+5] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WWGTBTYT width=8 seqs=20 chr6:30640818-30640898 ( 60) AATTCTTT 1 chr12:124068918-12406899 ( 3) AAATTTTT 1 chr14:65453501-65453581 ( 59) AAATCTTT 1 chr22:32808247-32808327 ( 61) ATGTCTTT 1 chr17:6544236-6544316 ( 32) TAGTCTTT 1 chr11:124543689-12454376 ( 71) TAGTTTTT 1 chr19:52097719-52097799 ( 43) AAGTGTTT 1 chr7:100034292-100034372 ( 5) AAGTGTTT 1 chr19:52490099-52490179 ( 41) AAATGTTT 1 chr1:161736028-161736108 ( 15) TTGTCTTT 1 chr10:104613973-10461405 ( 14) TTGTCTTT 1 chr8:117887101-117887181 ( 69) TTTTCTTT 1 chr2:85843159-85843239 ( 19) AATTTTCT 1 chr10:104192450-10419253 ( 2) AATTCTCT 1 chr17:57970328-57970408 ( 22) ATGTTTCT 1 chr1:202858270-202858350 ( 73) ATGTCTCT 1 chr18:10525879-10525959 ( 19) ATGTCTCT 1 chr17:38083857-38083937 ( 65) TAGTTTCT 1 chr2:15701444-15701524 ( 62) TTTTGTTT 1 chr19:2236249-2236329 ( 73) AAATGTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.307 E= 1.0e+002 195 -1097 -1097 106 184 -1097 -1097 126 25 -1097 72 58 -1097 -1097 -1097 258 -1097 60 -42 58 -1097 -1097 -1097 258 -1097 8 -1097 196 -1097 -1097 -1097 258 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 20 E= 1.0e+002 0.650000 0.000000 0.000000 0.350000 0.600000 0.000000 0.000000 0.400000 0.200000 0.000000 0.550000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.250000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.350000 0.000000 0.650000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WWGTBTYT MEME-5 regular expression -------------------------------------------------------------------------------- [AT][AT][GTA]T[CGT]T[TC]T -------------------------------------------------------------------------------- Time 19.12 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:40506832-40506912 4.80e-02 50_[+3(9.51e-05)]_22 chr10:27389434-27389514 7.39e-03 63_[+3(1.91e-05)]_9 chr16:53468299-53468379 1.27e-01 80 chr19:19144357-19144437 1.60e-02 35_[+3(5.74e-05)]_37 chr7:6487579-6487659 4.75e-03 22_[+3(1.91e-05)]_50 chr18:10525879-10525959 8.22e-04 6_[+3(9.51e-05)]_4_[+5(6.78e-05)]_\ 54 chr12:120554665-12055474 1.64e-01 80 chr5:178450659-178450739 3.89e-01 80 chr19:18794367-18794447 9.68e-02 80 chr17:78965596-78965676 8.51e-01 80 chr2:75873828-75873908 4.49e-03 10_[+2(2.41e-06)]_62 chr16:3661574-3661654 2.27e-03 30_[+3(1.91e-05)]_42 chr10:30638287-30638367 1.21e-01 30_[+4(4.42e-05)]_42 chr10:104192450-10419253 3.55e-02 1_[+5(5.21e-05)]_71 chr8:100905930-100906010 5.43e-01 80 chr7:89874413-89874493 1.36e-01 80 chr19:52430612-52430692 8.55e-01 80 chr11:70049291-70049371 3.13e-02 64_[+1(3.79e-05)]_8 chr20:35580159-35580239 2.48e-02 6_[+3(5.74e-05)]_66 chr14:102785986-10278606 3.44e-01 80 chr19:39138221-39138301 1.88e-02 20_[+3(5.74e-05)]_12_[+3(5.74e-05)]_\ 32 chr21:35747699-35747779 2.58e-02 8_[+3(9.51e-05)]_40_[+3(9.51e-05)]_\ 16 chr12:110338000-11033808 2.93e-01 80 chr2:203776916-203776996 6.55e-01 80 chr2:27357490-27357570 1.34e-03 13_[+3(1.91e-05)]_59 chr4:147096779-147096859 1.28e-01 80 chr17:27278634-27278714 9.48e-04 36_[+4(4.42e-05)]_36 chr19:6199604-6199684 5.57e-03 11_[+3(9.51e-05)]_61 chr14:50319566-50319646 2.98e-02 80 chr19:14225000-14225080 4.53e-01 80 chr12:110906112-11090619 2.44e-01 42_[+4(6.35e-05)]_30 chr11:18610240-18610320 3.69e-01 80 chr6:150067710-150067790 6.16e-02 80 chr10:134145576-13414565 8.65e-02 80 chr9:71394886-71394966 5.53e-02 66_[+1(3.79e-05)]_6 chr6:32097825-32097905 5.07e-02 80 chr2:3522672-3522752 1.12e-02 41_[+1(3.79e-05)]_31 chr12:132434374-13243445 8.75e-01 80 chr16:48278113-48278193 1.52e-01 80 chr15:101142364-10114244 3.18e-03 69_[+1(3.79e-05)]_3 chr7:149570987-149571067 1.16e-02 72_[+3(1.91e-05)] chr13:79233275-79233355 1.46e-01 80 chr17:29158869-29158949 3.87e-02 51_[+2(2.65e-05)]_21 chr14:54976519-54976599 1.45e-03 42_[+2(9.64e-06)]_30 chr1:231473647-231473727 8.55e-03 28_[+3(9.51e-05)]_24_[+1(3.79e-05)]_\ 12 chr19:7968707-7968787 4.44e-04 61_[+2(1.69e-05)]_11 chr12:13080578-13080658 4.72e-03 [+3(1.91e-05)]_31_[+3(1.91e-05)]_33 chr5:154317791-154317871 7.16e-01 80 chr1:116961243-116961323 5.67e-01 80 chr9:140513308-140513388 9.23e-03 16_[+3(5.74e-05)]_56 chr20:42939796-42939876 5.07e-01 80 chr19:7985130-7985210 1.39e-01 80 chr2:62132703-62132783 8.10e-02 80 chr1:176176691-176176771 1.50e-01 80 chr1:180123601-180123681 1.42e-01 57_[+4(8.80e-05)]_15 chr17:18087021-18087101 4.63e-02 80 chr2:15701444-15701524 3.63e-03 61_[+5(7.98e-05)]_11 chr20:34042597-34042677 1.96e-03 25_[+3(5.74e-05)]_47 chr5:33440761-33440841 1.28e-01 80 chr22:32808247-32808327 2.76e-04 60_[+5(1.09e-05)]_12 chr20:33735133-33735213 2.64e-02 25_[+3(9.51e-05)]_47 chr1:236687225-236687305 9.37e-01 80 chr11:69490126-69490206 2.97e-03 65_[+1(3.79e-05)]_7 chr8:143484660-143484740 2.60e-01 80 chr1:32573586-32573666 7.88e-03 32_[+2(8.20e-05)]_30_[+2(1.93e-05)]_\ 2 chr2:73298831-73298911 6.39e-01 80 chr19:33572042-33572122 3.32e-01 80 chr13:45694537-45694617 9.34e-07 26_[+2(9.64e-06)]_29_[+3(5.74e-05)]_\ 9 chr11:124543689-12454376 5.60e-02 70_[+5(1.64e-05)]_2 chr21:48055462-48055542 9.44e-03 46_[+3(9.51e-05)]_26 chr7:149423-149503 1.19e-02 18_[+3(5.74e-05)]_17_[+3(9.51e-05)]_\ 29 chr1:202858270-202858350 2.50e-03 72_[+5(6.78e-05)] chr2:242576994-242577074 6.86e-03 80 chr18:55297442-55297522 5.88e-01 80 chr8:27695356-27695436 8.96e-01 80 chr7:6629545-6629625 1.48e-01 80 chr14:65453501-65453581 2.11e-03 58_[+5(7.31e-06)]_14 chr9:139702289-139702369 3.93e-03 19_[+3(1.91e-05)]_53 chr10:16859664-16859744 1.84e-03 80 chr19:52490099-52490179 8.64e-04 40_[+5(2.68e-05)]_32 chr17:2615133-2615213 1.88e-02 14_[+4(9.82e-06)]_58 chr5:130500969-130501049 4.86e-03 21_[+3(5.74e-05)]_51 chr15:91565833-91565913 6.22e-01 80 chr17:47754911-47754991 5.07e-03 11_[+3(1.91e-05)]_46_[+1(3.79e-05)]_\ 7 chr16:188729-188809 7.28e-03 22_[+3(5.74e-05)]_50 chr20:3140541-3140621 2.53e-02 80 chr11:111742264-11174234 3.83e-04 29_[+4(9.82e-06)]_43 chr3:52232040-52232120 1.40e-01 80 chr1:95538485-95538565 2.05e-01 80 chr9:124922044-124922124 1.09e-03 7_[+3(1.91e-05)]_65 chr17:42785916-42785996 1.68e-02 37_[+2(1.93e-05)]_35 chr8:117887101-117887181 7.08e-04 68_[+5(3.46e-05)]_4 chr2:85843159-85843239 3.49e-02 18_[+5(5.21e-05)]_54 chr2:33824377-33824457 9.70e-03 34_[+3(1.91e-05)]_38 chr4:6675612-6675692 1.68e-02 23_[+3(1.91e-05)]_49 chr2:37193735-37193815 7.18e-01 80 chr11:113644510-11364459 5.17e-01 80 chr21:34697212-34697292 4.58e-01 80 chr13:27998646-27998726 7.10e-02 32_[+1(3.79e-05)]_11_[+1(3.79e-05)]_\ 21 chr7:6388635-6388715 5.36e-05 35_[+2(5.06e-05)]_11_[+1(3.79e-05)]_\ 18 chr4:54243757-54243837 1.37e-03 49_[+3(1.91e-05)]_23 chr12:27090949-27091029 2.67e-01 80 chr19:40023479-40023559 2.01e-03 21_[+3(1.91e-05)]_43_[+3(1.91e-05)] chr12:124068918-12406899 8.67e-03 2_[+5(7.31e-06)]_70 chr19:51162305-51162385 1.02e-01 80 chr16:3550882-3550962 1.96e-04 61_[+2(1.69e-05)]_11 chr1:167189761-167189841 9.90e-04 26_[+1(3.79e-05)]_32_[+1(3.79e-05)]_\ 6 chrX:119737680-119737760 1.30e-01 80 chrX:152864754-152864834 1.19e-01 80 chr16:4401307-4401387 2.52e-03 52_[+1(3.79e-05)]_20 chr16:80574779-80574859 3.83e-02 80 chr16:66968338-66968418 8.89e-01 80 chr16:58664412-58664492 2.12e-01 80 chr20:13765585-13765665 5.47e-03 22_[+4(8.80e-05)]_50 chr2:3381592-3381672 8.26e-02 80 chr9:131038460-131038540 1.27e-01 80 chr11:1330893-1330973 1.82e-01 80 chr1:75198777-75198857 1.34e-01 80 chr10:102027409-10202748 6.95e-01 80 chr17:27169817-27169897 3.27e-02 6_[+3(9.51e-05)]_66 chr8:133687827-133687907 3.01e-01 80 chr11:134094417-13409449 4.87e-03 26_[+3(1.91e-05)]_46 chr12:54673904-54673984 4.43e-06 13_[+3(9.51e-05)]_25_[+2(8.43e-05)]_\ 10_[+1(3.79e-05)]_8 chr19:17622853-17622933 7.84e-01 80 chr16:23464447-23464527 6.35e-01 80 chr11:34073847-34073927 2.53e-02 30_[+2(3.86e-05)]_42 chr19:663231-663311 9.34e-01 80 chrX:47863426-47863506 2.05e-02 80 chr17:57970328-57970408 2.71e-04 16_[+3(1.91e-05)]_33_[+3(1.91e-05)]_\ 15 chr19:36605783-36605863 4.49e-01 80 chr20:30539843-30539923 6.76e-03 42_[+3(5.74e-05)]_30 chr17:8103560-8103640 2.45e-03 5_[+1(3.79e-05)]_17_[+3(1.91e-05)]_\ 28_[+3(1.91e-05)]_6 chr19:2328604-2328684 1.66e-02 21_[+1(3.79e-05)]_51 chr9:124855609-124855689 1.24e-01 80 chr16:19535069-19535149 4.85e-01 80 chr11:65029258-65029338 4.01e-02 80 chr17:7143085-7143165 3.88e-01 80 chr4:113558637-113558717 6.50e-01 80 chr10:104613973-10461405 8.43e-03 13_[+5(3.04e-05)]_59 chr1:161129195-161129275 1.23e-02 57_[+3(5.74e-05)]_15 chr22:20106245-20106325 8.54e-02 80 chr17:19265954-19266034 2.20e-02 80 chr19:11071371-11071451 8.24e-03 12_[+3(1.91e-05)]_41_[+3(5.74e-05)]_\ 11 chr5:138678143-138678223 6.98e-01 80 chr15:49338690-49338770 8.11e-01 80 chr2:110970105-110970185 1.29e-01 38_[+4(4.42e-05)]_34 chr15:42066631-42066711 6.12e-01 80 chr6:160182939-160183019 3.02e-02 16_[+3(9.51e-05)]_56 chr4:2420569-2420649 7.05e-01 80 chr22:21356068-21356148 8.36e-03 15_[+1(3.79e-05)]_57 chr15:41099640-41099720 1.26e-01 80 chr7:100034292-100034372 1.73e-02 4_[+5(2.07e-05)]_68 chr6:30640818-30640898 2.96e-03 59_[+5(5.48e-06)]_13 chr2:85581765-85581845 2.69e-02 80 chr14:90722846-90722926 9.81e-01 80 chr1:24127347-24127427 9.16e-03 17_[+4(1.48e-05)]_55 chr19:2236249-2236329 7.17e-03 80 chr7:100797734-100797814 6.52e-01 80 chr19:35615529-35615609 1.68e-02 50_[+1(3.79e-05)]_22 chr19:633553-633633 3.75e-03 [+1(3.79e-05)]_72 chr19:531609-531689 1.12e-01 80 chr17:40714102-40714182 1.66e-01 80 chr17:41116478-41116558 7.94e-04 41_[+4(9.82e-06)]_31 chr21:33651405-33651485 4.14e-04 55_[+3(1.91e-05)]_17 chr7:5229798-5229878 4.34e-01 80 chr16:30546306-30546386 8.06e-02 80 chr3:14166395-14166475 8.40e-04 51_[+3(5.74e-05)]_21 chr16:66586403-66586483 3.85e-03 30_[+1(3.79e-05)]_19_[+3(1.91e-05)]_\ 15 chr10:69548379-69548459 8.74e-01 80 chr14:102771499-10277157 5.04e-03 22_[+3(1.91e-05)]_50 chrX:30907515-30907595 4.52e-02 11_[+4(2.94e-05)]_61 chr16:69419907-69419987 8.70e-01 80 chr5:218317-218397 1.97e-02 48_[+3(5.74e-05)]_24 chr22:22000867-22000947 1.13e-01 80 chr22:22020235-22020315 7.61e-01 80 chr9:125590948-125591028 6.74e-02 41_[+4(2.94e-05)]_31 chr1:21113283-21113363 3.90e-02 23_[+1(3.79e-05)]_49 chr10:124639141-12463922 6.28e-04 4_[+3(1.91e-05)]_59_[+3(1.91e-05)]_\ 1 chr6:20534644-20534724 5.60e-03 35_[+1(3.79e-05)]_37 chr6:109169568-109169648 8.87e-02 80 chr2:228189913-228189993 2.30e-01 80 chr12:12764730-12764810 7.94e-01 80 chr5:1345210-1345290 1.90e-01 80 chr9:131084808-131084888 7.91e-01 80 chr22:22307274-22307354 1.37e-01 80 chr2:71558849-71558929 4.72e-02 80 chr1:16971194-16971274 1.51e-02 14_[+4(6.35e-05)]_58 chr19:52097719-52097799 2.24e-04 24_[+2(9.64e-06)]_10_[+5(2.07e-05)]_\ 30 chr10:124768345-12476842 1.41e-04 45_[+2(1.69e-05)]_27 chr2:242626377-242626457 9.67e-01 80 chr5:42909091-42909171 2.38e-04 19_[+3(1.91e-05)]_53 chr19:15530056-15530136 7.22e-01 80 chr5:77590520-77590600 3.49e-03 45_[+3(1.91e-05)]_27 chr17:6544236-6544316 2.12e-03 31_[+5(1.64e-05)]_41 chr18:61089791-61089871 2.34e-01 80 chr12:132413736-13241381 6.78e-03 9_[+2(3.86e-05)]_63 chr3:47555242-47555322 7.66e-03 80 chr2:207024166-207024246 3.96e-03 59_[+2(9.64e-06)]_13 chr21:46293764-46293844 1.40e-02 34_[+3(9.51e-05)]_38 chr19:42721927-42722007 2.27e-02 4_[+1(3.79e-05)]_68 chr12:88535948-88536028 8.37e-01 80 chr22:48027363-48027443 1.74e-02 15_[+2(4.81e-06)]_57 chr1:165600137-165600217 1.34e-03 17_[+4(9.82e-06)]_55 chr15:89010887-89010967 1.33e-02 80 chr6:41040311-41040391 1.77e-02 80 chr2:54014062-54014142 4.93e-01 80 chr1:155990753-155990833 3.96e-01 80 chr19:44100404-44100484 5.25e-03 53_[+1(3.79e-05)]_19 chr9:130965527-130965607 5.73e-02 80 chr13:41635598-41635678 7.20e-01 80 chr20:25388220-25388300 3.96e-01 80 chr6:26056929-26057009 2.09e-01 80 chr12:69753448-69753528 4.32e-02 45_[+3(9.51e-05)]_27 chr1:150898741-150898821 6.41e-01 80 chr16:2009437-2009517 5.87e-01 80 chr11:62446566-62446646 7.88e-02 80 chr1:161736028-161736108 4.33e-05 11_[+2(9.64e-06)]_35_[+2(2.41e-06)]_\ 18 chr19:9420457-9420537 3.12e-03 51_[+1(3.79e-05)]_21 chr11:116643667-11664374 2.47e-02 48_[+4(9.82e-06)]_24 chr19:39971318-39971398 7.38e-02 80 chr16:791029-791109 1.57e-02 48_[+1(3.79e-05)]_24 chr7:56131912-56131992 4.04e-02 43_[+1(3.79e-05)]_29 chr19:53073502-53073582 3.21e-01 80 chr17:80709840-80709920 8.51e-03 37_[+2(2.65e-05)]_35 chr17:38083857-38083937 5.76e-02 64_[+5(7.98e-05)]_8 chr2:207630244-207630324 8.10e-03 31_[+2(2.65e-05)]_41 chr5:52095825-52095905 2.91e-02 10_[+3(9.51e-05)]_62 chr11:14521415-14521495 4.87e-02 80 chr3:37284630-37284710 1.17e-02 80 chr20:3451574-3451654 2.67e-01 80 chr22:28315376-28315456 2.21e-01 80 chr15:55611333-55611413 1.58e-01 41_[+4(8.80e-05)]_31 chr11:842781-842861 3.43e-01 80 chr13:34392130-34392210 6.28e-05 11_[+2(2.41e-06)]_61 chr2:74710061-74710141 5.12e-01 80 chr19:16308588-16308668 4.99e-03 43_[+3(9.51e-05)]_14_[+3(9.51e-05)]_\ 7 chr22:21959252-21959332 3.77e-01 80 chr13:103498142-10349822 1.61e-01 80 chr7:100303650-100303730 5.38e-01 80 chr20:35233970-35234050 9.07e-02 15_[+2(4.34e-05)]_57 chr10:79789280-79789360 1.51e-01 80 chr16:90038932-90039012 4.47e-03 63_[+3(1.91e-05)]_9 chr1:150241411-150241491 8.76e-02 5_[+4(9.82e-06)]_67 chr5:98264793-98264873 3.35e-02 80 chr1:170043847-170043927 3.75e-05 7_[+1(3.79e-05)]_19_[+3(5.74e-05)]_\ 24_[+2(3.86e-05)]_6 chr1:91966392-91966472 1.51e-03 17_[+3(5.74e-05)]_55 chr17:72772503-72772583 5.78e-01 80 chr7:6746586-6746666 7.42e-03 5_[+1(3.79e-05)]_27_[+3(5.74e-05)]_\ 32 chr2:232826336-232826416 8.45e-01 80 chr11:74303512-74303592 1.37e-02 39_[+2(3.86e-05)]_33 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************