******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/NR4A1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr7:137030913-137030993 1.0000 80 chr7:48512404-48512484 1.0000 80 chr3:32098190-32098270 1.0000 80 chr2:238848554-238848634 1.0000 80 chr14:24409226-24409306 1.0000 80 chr1:8998642-8998722 1.0000 80 chr8:39801982-39802062 1.0000 80 chr16:65798804-65798884 1.0000 80 chr3:24538767-24538847 1.0000 80 chrX:113314821-113314901 1.0000 80 chr11:76764479-76764559 1.0000 80 chr1:43079512-43079592 1.0000 80 chr8:39794264-39794344 1.0000 80 chr21:15249958-15250038 1.0000 80 chr5:114720481-114720561 1.0000 80 chr3:4780443-4780523 1.0000 80 chr5:67924059-67924139 1.0000 80 chr10:13580066-13580146 1.0000 80 chr2:41954486-41954566 1.0000 80 chr17:14426261-14426341 1.0000 80 chr6:2926805-2926885 1.0000 80 chr4:8244740-8244820 1.0000 80 chr12:132038158-13203823 1.0000 80 chr4:4325791-4325871 1.0000 80 chr12:132109867-13210994 1.0000 80 chr3:101350930-101351010 1.0000 80 chr12:115642878-11564295 1.0000 80 chr14:32490169-32490249 1.0000 80 chr11:3531005-3531085 1.0000 80 chr6:20188874-20188954 1.0000 80 chr18:9005945-9006025 1.0000 80 chr12:113154129-11315420 1.0000 80 chr22:23781916-23781996 1.0000 80 chr10:33345932-33346012 1.0000 80 chr3:146300161-146300241 1.0000 80 chrX:2467545-2467625 1.0000 80 chr10:44479422-44479502 1.0000 80 chr13:96037784-96037864 1.0000 80 chr2:174156182-174156262 1.0000 80 chr2:62031502-62031582 1.0000 80 chr9:107826674-107826754 1.0000 80 chr17:15430250-15430330 1.0000 80 chr2:129201336-129201416 1.0000 80 chr4:129607243-129607323 1.0000 80 chr2:171218993-171219073 1.0000 80 chrX:44244382-44244462 1.0000 80 chr3:43729844-43729924 1.0000 80 chr5:168007905-168007985 1.0000 80 chr20:4199271-4199351 1.0000 80 chr7:36315653-36315733 1.0000 80 chr20:36170891-36170971 1.0000 80 chr10:12307547-12307627 1.0000 80 chr2:9820340-9820420 1.0000 80 chr18:33311091-33311171 1.0000 80 chr2:98328874-98328954 1.0000 80 chr7:150019220-150019300 1.0000 80 chr11:63298736-63298816 1.0000 80 chr19:56858850-56858930 1.0000 80 chr6:30841738-30841818 1.0000 80 chr19:35411123-35411203 1.0000 80 chr1:161527712-161527792 1.0000 80 chr6:110201012-110201092 1.0000 80 chr19:46706622-46706702 1.0000 80 chr3:129895918-129895998 1.0000 80 chr2:29265824-29265904 1.0000 80 chr17:42022589-42022669 1.0000 80 chr12:70484852-70484932 1.0000 80 chr9:102796313-102796393 1.0000 80 chr4:38319052-38319132 1.0000 80 chr1:113360333-113360413 1.0000 80 chr15:68212982-68213062 1.0000 80 chr7:30767706-30767786 1.0000 80 chr17:47154382-47154462 1.0000 80 chr8:59573576-59573656 1.0000 80 chr10:72421532-72421612 1.0000 80 chrX:2701030-2701110 1.0000 80 chr22:21357328-21357408 1.0000 80 chr8:41315665-41315745 1.0000 80 chr9:139684097-139684177 1.0000 80 chr17:25435112-25435192 1.0000 80 chr19:43949712-43949792 1.0000 80 chr12:7165611-7165691 1.0000 80 chr11:76522467-76522547 1.0000 80 chr1:147143994-147144074 1.0000 80 chr10:89410768-89410848 1.0000 80 chr14:102154568-10215464 1.0000 80 chr10:104215006-10421508 1.0000 80 chr17:18719940-18720020 1.0000 80 chr5:95043435-95043515 1.0000 80 chr3:14314357-14314437 1.0000 80 chr8:98337895-98337975 1.0000 80 chr15:68344358-68344438 1.0000 80 chr22:29136260-29136340 1.0000 80 chr19:33177937-33178017 1.0000 80 chr1:20846529-20846609 1.0000 80 chr9:88798426-88798506 1.0000 80 chr8:144631408-144631488 1.0000 80 chr6:43894957-43895037 1.0000 80 chr5:36442504-36442584 1.0000 80 chr2:172435075-172435155 1.0000 80 chr8:29474722-29474802 1.0000 80 chr6:42284246-42284326 1.0000 80 chr21:46265386-46265466 1.0000 80 chr19:18475287-18475367 1.0000 80 chr5:1132018-1132098 1.0000 80 chr2:111449393-111449473 1.0000 80 chr6:145171189-145171269 1.0000 80 chr1:85745548-85745628 1.0000 80 chr3:186728391-186728471 1.0000 80 chr16:26981046-26981126 1.0000 80 chr11:9341176-9341256 1.0000 80 chr1:1071243-1071323 1.0000 80 chr7:140186617-140186697 1.0000 80 chr17:75084058-75084138 1.0000 80 chr16:17684940-17685020 1.0000 80 chr10:28674865-28674945 1.0000 80 chr2:87816013-87816093 1.0000 80 chr21:45633797-45633877 1.0000 80 chr11:61407384-61407464 1.0000 80 chr11:18713081-18713161 1.0000 80 chr8:29952253-29952333 1.0000 80 chr20:30093806-30093886 1.0000 80 chr3:5124170-5124250 1.0000 80 chr22:23878288-23878368 1.0000 80 chr8:131674443-131674523 1.0000 80 chr1:149362404-149362484 1.0000 80 chr12:114022096-11402217 1.0000 80 chr17:64730781-64730861 1.0000 80 chr7:138116271-138116351 1.0000 80 chr6:34688110-34688190 1.0000 80 chr3:13931285-13931365 1.0000 80 chr9:99994415-99994495 1.0000 80 chr7:150052898-150052978 1.0000 80 chr2:104086432-104086512 1.0000 80 chr21:46013670-46013750 1.0000 80 chr15:27336933-27337013 1.0000 80 chr3:32090137-32090217 1.0000 80 chr2:74852978-74853058 1.0000 80 chr7:29834750-29834830 1.0000 80 chr19:35656553-35656633 1.0000 80 chr20:36006970-36007050 1.0000 80 chr22:21447741-21447821 1.0000 80 chr6:16044718-16044798 1.0000 80 chr7:137908471-137908551 1.0000 80 chr2:120096524-120096604 1.0000 80 chr3:10018080-10018160 1.0000 80 chr4:57566987-57567067 1.0000 80 chr1:167130632-167130712 1.0000 80 chr12:7073388-7073468 1.0000 80 chr17:25434189-25434269 1.0000 80 chr7:73574330-73574410 1.0000 80 chr6:157939918-157939998 1.0000 80 chr21:30164064-30164144 1.0000 80 chr3:44509734-44509814 1.0000 80 chrX:44343352-44343432 1.0000 80 chr6:110242164-110242244 1.0000 80 chr6:2980149-2980229 1.0000 80 chr1:201123985-201124065 1.0000 80 chr12:110709626-11070970 1.0000 80 chr1:211396339-211396419 1.0000 80 chrX:47668987-47669067 1.0000 80 chr3:14293112-14293192 1.0000 80 chr20:45828644-45828724 1.0000 80 chr8:29217305-29217385 1.0000 80 chr17:32235490-32235570 1.0000 80 chr10:95034253-95034333 1.0000 80 chr6:37150653-37150733 1.0000 80 chr10:99387706-99387786 1.0000 80 chr21:19062505-19062585 1.0000 80 chr17:13542281-13542361 1.0000 80 chr7:36257175-36257255 1.0000 80 chr7:14040888-14040968 1.0000 80 chr16:25565141-25565221 1.0000 80 chr9:110438221-110438301 1.0000 80 chr3:11310839-11310919 1.0000 80 chr2:171105544-171105624 1.0000 80 chr19:49395190-49395270 1.0000 80 chr3:15423160-15423240 1.0000 80 chr18:46488773-46488853 1.0000 80 chr2:103039974-103040054 1.0000 80 chr5:39150236-39150316 1.0000 80 chr3:37866035-37866115 1.0000 80 chr1:162465801-162465881 1.0000 80 chr8:131684327-131684407 1.0000 80 chr1:1358056-1358136 1.0000 80 chr15:29965583-29965663 1.0000 80 chr10:29100687-29100767 1.0000 80 chr6:16236413-16236493 1.0000 80 chr3:9686086-9686166 1.0000 80 chr3:138129221-138129301 1.0000 80 chr20:36187878-36187958 1.0000 80 chr16:17176440-17176520 1.0000 80 chr17:49512274-49512354 1.0000 80 chr6:20273186-20273266 1.0000 80 chr1:56968686-56968766 1.0000 80 chr11:86648398-86648478 1.0000 80 chr15:68193168-68193248 1.0000 80 chr20:49125567-49125647 1.0000 80 chr17:41430097-41430177 1.0000 80 chr1:241860177-241860257 1.0000 80 chr10:80938033-80938113 1.0000 80 chr18:874423-874503 1.0000 80 chr6:158176276-158176356 1.0000 80 chr14:70164068-70164148 1.0000 80 chr19:21803906-21803986 1.0000 80 chr7:133895188-133895268 1.0000 80 chr6:27028067-27028147 1.0000 80 chr5:90587952-90588032 1.0000 80 chr12:68745917-68745997 1.0000 80 chr6:10750957-10751037 1.0000 80 chr1:65267954-65268034 1.0000 80 chrX:16604175-16604255 1.0000 80 chr17:40466131-40466211 1.0000 80 chr8:37929538-37929618 1.0000 80 chr15:45876396-45876476 1.0000 80 chr1:142886384-142886464 1.0000 80 chr16:29794622-29794702 1.0000 80 chr3:43728868-43728948 1.0000 80 chr22:39167993-39168073 1.0000 80 chr9:133323722-133323802 1.0000 80 chr5:55452792-55452872 1.0000 80 chr8:42124064-42124144 1.0000 80 chr19:49385453-49385533 1.0000 80 chr10:86285104-86285184 1.0000 80 chr19:12993627-12993707 1.0000 80 chr22:43521332-43521412 1.0000 80 chr16:58467684-58467764 1.0000 80 chr11:96063790-96063870 1.0000 80 chr6:33345587-33345667 1.0000 80 chr15:90325462-90325542 1.0000 80 chrX:30992018-30992098 1.0000 80 chr5:68387004-68387084 1.0000 80 chr7:50428367-50428447 1.0000 80 chr20:61895485-61895565 1.0000 80 chr7:138777023-138777103 1.0000 80 chr5:149322878-149322958 1.0000 80 chr10:71170388-71170468 1.0000 80 chr6:158130771-158130851 1.0000 80 chr1:231208401-231208481 1.0000 80 chr16:15664979-15665059 1.0000 80 chr3:194870124-194870204 1.0000 80 chr7:2996642-2996722 1.0000 80 chr9:100812082-100812162 1.0000 80 chr6:10662516-10662596 1.0000 80 chr6:37396486-37396566 1.0000 80 chr15:75432971-75433051 1.0000 80 chr1:149362607-149362687 1.0000 80 chr6:158174031-158174111 1.0000 80 chr2:205219405-205219485 1.0000 80 chr1:222135882-222135962 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_NR4A1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/NR4A1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.265 C 0.234 G 0.233 T 0.268 Background letter frequencies (from file dataset with add-one prior applied): A 0.265 C 0.234 G 0.233 T 0.268 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CAAGATGG MEME-1 width = 8 sites = 87 llr = 837 E-value = 9.0e-114 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :aa3a::: pos.-specific C 9::::::: probability G :::7::aa matrix T :::::a:: bits 2.1 * 1.9 *** 1.7 *** **** 1.5 *** **** Relative 1.3 *** **** Entropy 1.1 ******** (13.9 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAAGATGG consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:149362607-149362687 47 1.48e-05 agcccctatt caagatgg agttgctctg chr9:100812082-100812162 36 1.48e-05 agcccccatt caagatgg agtcactcta chr16:15664979-15665059 30 1.48e-05 agcccctatt caagatgg agtcactgta chr7:138777023-138777103 24 1.48e-05 gtgaaagagc caagatgg agtctgtctg chr5:68387004-68387084 13 1.48e-05 agctcctatt caagatgg agttgccccg chr6:33345587-33345667 35 1.48e-05 aacccctatt caagatgg agttgctctg chr11:96063790-96063870 35 1.48e-05 tggctgggtc caagatgg cctcacttgt chr22:43521332-43521412 36 1.48e-05 agcccctaat caagatgg agtcgctctg chr10:86285104-86285184 55 1.48e-05 ccagagctct caagatgg tggcaggccg chr15:45876396-45876476 31 1.48e-05 cagtcctatt caagatgg agttgctctg chr1:65267954-65268034 59 1.48e-05 aacttctatt caagatgg aggcactctg chr5:90587952-90588032 26 1.48e-05 agcccctatt caagatgg agttgctatg chr14:70164068-70164148 59 1.48e-05 agcccctatt caagatgg agtcgctgtc chr6:158176276-158176356 31 1.48e-05 gctctgtatt caagatgg agttgctctg chr1:241860177-241860257 48 1.48e-05 agcccctatt caagatgg atttgctctg chr15:68193168-68193248 29 1.48e-05 aggcactatt caagatgg agttgctctg chr6:20273186-20273266 30 1.48e-05 agcccttatt caagatgg agttgctctg chr16:17176440-17176520 12 1.48e-05 agcccctatt caagatgg agtcactctg chr3:138129221-138129301 6 1.48e-05 ctatt caagatgg agttgctgtg chr6:16236413-16236493 34 1.48e-05 cggttaaaag caagatgg agtcagttag chr15:29965583-29965663 10 1.48e-05 gcccctact caagatgg agtcgctgtg chr1:162465801-162465881 13 1.48e-05 agctcctatt caagatgg agttgctctg chr3:37866035-37866115 33 1.48e-05 agcccctatt caagatgg agttgctctg chr18:46488773-46488853 49 1.48e-05 agcccctatt caagatgg agttgctctg chr3:11310839-11310919 50 1.48e-05 agcccctatt caagatgg agtcattctg chr9:110438221-110438301 26 1.48e-05 agcccctatt caagatgg agtcactctg chr7:36257175-36257255 39 1.48e-05 agcccctatt caagatgg agttgttctg chr3:14293112-14293192 29 1.48e-05 aggttagaag caagatgg agtcaattat chr12:110709626-11070970 8 1.48e-05 tcctatt caagatgg agttgctctg chr2:120096524-120096604 24 1.48e-05 gatcagtatc caagatgg agttgctttg chr7:29834750-29834830 26 1.48e-05 agctcctatt caagatgg agttgctctg chr15:27336933-27337013 24 1.48e-05 CTGCCCTAtt caagatgg ctgctgtact chr2:104086432-104086512 34 1.48e-05 agcacttatt caagatgg agttgctctg chr12:114022096-11402217 1 1.48e-05 . caagatgg agtcactctg chr17:75084058-75084138 20 1.48e-05 agcccctatt caagatgg agttgctctg chr7:140186617-140186697 27 1.48e-05 aggttagaag caagatgg agtcagttaa chr21:46265386-46265466 31 1.48e-05 agaccctact caagatgg agtcactctg chr2:172435075-172435155 43 1.48e-05 agcccctatt caagatgg agtcgctctg chr1:20846529-20846609 62 1.48e-05 aggttagagg caagatgg agtcagttaa chr5:95043435-95043515 30 1.48e-05 gtgaaagagc caagatgg agtctgtctg chr17:25435112-25435192 59 1.48e-05 aggttaaagg caagatgg agtaggttag chrX:2701030-2701110 15 1.48e-05 aggttagaag caagatgg agttggttag chr17:47154382-47154462 34 1.48e-05 agcacttatt caagatgg agtcgctctg chr3:129895918-129895998 36 1.48e-05 gtgaaagagc caagatgg agtctgtctg chr19:56858850-56858930 40 1.48e-05 gtgaaggagc caagatgg tgtctgtctg chr2:98328874-98328954 14 1.48e-05 atgaaagagc caagatgg agtctgtctg chr20:36170891-36170971 37 1.48e-05 GGTTTCACTT CAAGATGG CGTCACTCTT chr2:129201336-129201416 20 1.48e-05 agcccctatt caagatgg agttgctctg chr2:62031502-62031582 29 1.48e-05 agctcctttt caagatgg agttgctctg chrX:2467545-2467625 57 1.48e-05 agcccctatt caagatgg agttgctctg chr6:2926805-2926885 59 1.48e-05 tagtaccgat caagatgg agtttcttat chr1:8998642-8998722 10 1.48e-05 gataataac caagatgg agtcactctg chr16:58467684-58467764 2 3.16e-05 c caaaatgg agttgctctt chr16:29794622-29794702 17 3.16e-05 catatcctaa caaaatgg aacaaaaagg chr19:21803906-21803986 62 3.16e-05 aggtcttttt caaaatgg agtcccttat chr17:41430097-41430177 24 3.16e-05 agccctccct caaaatgg agtcgctttg chr5:39150236-39150316 10 3.16e-05 attaaaaat caaaatgg agtcacccac chr3:15423160-15423240 55 3.16e-05 gggttaggag caaaatgg agttagtcac chr1:211396339-211396419 28 3.16e-05 tagtacagaa caaaatgg agtctcttat chr6:34688110-34688190 20 3.16e-05 tagtacagaa caaaatgg agtctcctat chr3:5124170-5124250 4 3.16e-05 gaa caaaatgg agtctcctat chr8:29952253-29952333 2 3.16e-05 c caaaatgg agtctgtccc chr11:9341176-9341256 4 3.16e-05 gaa caaaatgg agtctcttat chr6:145171189-145171269 57 3.16e-05 ATCAAATGTT CAAAATGG AGAAGCAAGT chr22:29136260-29136340 35 3.16e-05 tttattaggt caaaatgg ctgtcctaac chr15:68344358-68344438 67 3.16e-05 gactaaaaat caaaatgg tgtcac chr10:104215006-10421508 11 3.16e-05 tcttacagaa caaaatgg agtctcctat chr19:43949712-43949792 35 3.16e-05 cagaccaaac caaaatgg agtcactcgt chr9:139684097-139684177 60 3.16e-05 tagtacagat caaaatgg agtttcttat chr1:113360333-113360413 18 3.16e-05 aggtcttttt caaaatgg agtctcttat chr17:15430250-15430330 64 3.16e-05 tagaccaaac caaaatgg agttactca chr2:205219405-205219485 8 4.85e-05 tgaaatg taagatgg agtctttttc chr18:874423-874503 30 4.85e-05 agctcctatt taagatgg agttgctctg chr10:12307547-12307627 10 4.85e-05 gctcctgtt taagatgg agttgctctg chr7:137908471-137908551 34 6.54e-05 ggaaatgaca caatatgg agtaactcat chrX:113314821-113314901 42 6.54e-05 gagaacaaag caatatgg agtaactcaa chr17:32235490-32235570 18 1.10e-04 agaaagataa aaagatgg ggaGATCAAG chr3:4780443-4780523 35 1.10e-04 GATGAAATGC CATGATGG AGTTACCGCA chr11:18713081-18713161 1 1.27e-04 . caagattg tgccactgca chr2:74852978-74853058 65 1.42e-04 actgctcttc caacatgg agaatacg chr19:35656553-35656633 26 1.68e-04 ttaccctatt cgagatgg agttgctctg chr2:111449393-111449473 69 1.68e-04 acatatatgt ccagatgg cctg chrX:30992018-30992098 27 2.02e-04 GACTGCCTCC CAAAGTGG CACACAGCTA chr8:131684327-131684407 41 2.02e-04 gccgagtggg caaagtgg cctcacaggt chr7:14040888-14040968 46 2.38e-04 ATAGCAAGTT Aaaaatgg agttactcat chr17:25434189-25434269 26 2.38e-04 agcccctctt cataatgg agtatctttg chr10:29100687-29100767 43 2.57e-04 AGTAGACAAT CAAAATtg tcagagatgc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:149362607-149362687 1.5e-05 46_[+1]_26 chr9:100812082-100812162 1.5e-05 35_[+1]_37 chr16:15664979-15665059 1.5e-05 29_[+1]_43 chr7:138777023-138777103 1.5e-05 23_[+1]_49 chr5:68387004-68387084 1.5e-05 12_[+1]_60 chr6:33345587-33345667 1.5e-05 34_[+1]_38 chr11:96063790-96063870 1.5e-05 34_[+1]_38 chr22:43521332-43521412 1.5e-05 35_[+1]_37 chr10:86285104-86285184 1.5e-05 54_[+1]_18 chr15:45876396-45876476 1.5e-05 30_[+1]_42 chr1:65267954-65268034 1.5e-05 58_[+1]_14 chr5:90587952-90588032 1.5e-05 25_[+1]_47 chr14:70164068-70164148 1.5e-05 58_[+1]_14 chr6:158176276-158176356 1.5e-05 30_[+1]_42 chr1:241860177-241860257 1.5e-05 47_[+1]_25 chr15:68193168-68193248 1.5e-05 28_[+1]_44 chr6:20273186-20273266 1.5e-05 29_[+1]_43 chr16:17176440-17176520 1.5e-05 11_[+1]_61 chr3:138129221-138129301 1.5e-05 5_[+1]_67 chr6:16236413-16236493 1.5e-05 33_[+1]_39 chr15:29965583-29965663 1.5e-05 9_[+1]_63 chr1:162465801-162465881 1.5e-05 12_[+1]_60 chr3:37866035-37866115 1.5e-05 32_[+1]_40 chr18:46488773-46488853 1.5e-05 48_[+1]_24 chr3:11310839-11310919 1.5e-05 49_[+1]_23 chr9:110438221-110438301 1.5e-05 25_[+1]_47 chr7:36257175-36257255 1.5e-05 38_[+1]_34 chr3:14293112-14293192 1.5e-05 28_[+1]_44 chr12:110709626-11070970 1.5e-05 7_[+1]_65 chr2:120096524-120096604 1.5e-05 23_[+1]_49 chr7:29834750-29834830 1.5e-05 25_[+1]_47 chr15:27336933-27337013 1.5e-05 23_[+1]_49 chr2:104086432-104086512 1.5e-05 33_[+1]_39 chr12:114022096-11402217 1.5e-05 [+1]_72 chr17:75084058-75084138 1.5e-05 19_[+1]_53 chr7:140186617-140186697 1.5e-05 26_[+1]_46 chr21:46265386-46265466 1.5e-05 30_[+1]_42 chr2:172435075-172435155 1.5e-05 42_[+1]_30 chr1:20846529-20846609 1.5e-05 61_[+1]_11 chr5:95043435-95043515 1.5e-05 29_[+1]_43 chr17:25435112-25435192 1.5e-05 58_[+1]_14 chrX:2701030-2701110 1.5e-05 14_[+1]_58 chr17:47154382-47154462 1.5e-05 33_[+1]_39 chr3:129895918-129895998 1.5e-05 35_[+1]_37 chr19:56858850-56858930 1.5e-05 39_[+1]_33 chr2:98328874-98328954 1.5e-05 13_[+1]_59 chr20:36170891-36170971 1.5e-05 36_[+1]_36 chr2:129201336-129201416 1.5e-05 19_[+1]_53 chr2:62031502-62031582 1.5e-05 28_[+1]_44 chrX:2467545-2467625 1.5e-05 56_[+1]_16 chr6:2926805-2926885 1.5e-05 58_[+1]_14 chr1:8998642-8998722 1.5e-05 9_[+1]_63 chr16:58467684-58467764 3.2e-05 1_[+1]_71 chr16:29794622-29794702 3.2e-05 16_[+1]_56 chr19:21803906-21803986 3.2e-05 61_[+1]_11 chr17:41430097-41430177 3.2e-05 23_[+1]_49 chr5:39150236-39150316 3.2e-05 9_[+1]_63 chr3:15423160-15423240 3.2e-05 54_[+1]_18 chr1:211396339-211396419 3.2e-05 27_[+1]_45 chr6:34688110-34688190 3.2e-05 19_[+1]_53 chr3:5124170-5124250 3.2e-05 3_[+1]_69 chr8:29952253-29952333 3.2e-05 1_[+1]_71 chr11:9341176-9341256 3.2e-05 3_[+1]_69 chr6:145171189-145171269 3.2e-05 56_[+1]_16 chr22:29136260-29136340 3.2e-05 34_[+1]_38 chr15:68344358-68344438 3.2e-05 66_[+1]_6 chr10:104215006-10421508 3.2e-05 10_[+1]_62 chr19:43949712-43949792 3.2e-05 34_[+1]_38 chr9:139684097-139684177 3.2e-05 59_[+1]_13 chr1:113360333-113360413 3.2e-05 17_[+1]_55 chr17:15430250-15430330 3.2e-05 63_[+1]_9 chr2:205219405-205219485 4.8e-05 7_[+1]_65 chr18:874423-874503 4.8e-05 29_[+1]_43 chr10:12307547-12307627 4.8e-05 9_[+1]_63 chr7:137908471-137908551 6.5e-05 33_[+1]_39 chrX:113314821-113314901 6.5e-05 41_[+1]_31 chr17:32235490-32235570 0.00011 17_[+1]_55 chr3:4780443-4780523 0.00011 34_[+1]_38 chr11:18713081-18713161 0.00013 [+1]_72 chr2:74852978-74853058 0.00014 64_[+1]_8 chr19:35656553-35656633 0.00017 25_[+1]_47 chr2:111449393-111449473 0.00017 68_[+1]_4 chrX:30992018-30992098 0.0002 26_[+1]_46 chr8:131684327-131684407 0.0002 40_[+1]_32 chr7:14040888-14040968 0.00024 45_[+1]_27 chr17:25434189-25434269 0.00024 25_[+1]_47 chr10:29100687-29100767 0.00026 42_[+1]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAAGATGG width=8 seqs=87 chr1:149362607-149362687 ( 47) CAAGATGG 1 chr9:100812082-100812162 ( 36) CAAGATGG 1 chr16:15664979-15665059 ( 30) CAAGATGG 1 chr7:138777023-138777103 ( 24) CAAGATGG 1 chr5:68387004-68387084 ( 13) CAAGATGG 1 chr6:33345587-33345667 ( 35) CAAGATGG 1 chr11:96063790-96063870 ( 35) CAAGATGG 1 chr22:43521332-43521412 ( 36) CAAGATGG 1 chr10:86285104-86285184 ( 55) CAAGATGG 1 chr15:45876396-45876476 ( 31) CAAGATGG 1 chr1:65267954-65268034 ( 59) CAAGATGG 1 chr5:90587952-90588032 ( 26) CAAGATGG 1 chr14:70164068-70164148 ( 59) CAAGATGG 1 chr6:158176276-158176356 ( 31) CAAGATGG 1 chr1:241860177-241860257 ( 48) CAAGATGG 1 chr15:68193168-68193248 ( 29) CAAGATGG 1 chr6:20273186-20273266 ( 30) CAAGATGG 1 chr16:17176440-17176520 ( 12) CAAGATGG 1 chr3:138129221-138129301 ( 6) CAAGATGG 1 chr6:16236413-16236493 ( 34) CAAGATGG 1 chr15:29965583-29965663 ( 10) CAAGATGG 1 chr1:162465801-162465881 ( 13) CAAGATGG 1 chr3:37866035-37866115 ( 33) CAAGATGG 1 chr18:46488773-46488853 ( 49) CAAGATGG 1 chr3:11310839-11310919 ( 50) CAAGATGG 1 chr9:110438221-110438301 ( 26) CAAGATGG 1 chr7:36257175-36257255 ( 39) CAAGATGG 1 chr3:14293112-14293192 ( 29) CAAGATGG 1 chr12:110709626-11070970 ( 8) CAAGATGG 1 chr2:120096524-120096604 ( 24) CAAGATGG 1 chr7:29834750-29834830 ( 26) CAAGATGG 1 chr15:27336933-27337013 ( 24) CAAGATGG 1 chr2:104086432-104086512 ( 34) CAAGATGG 1 chr12:114022096-11402217 ( 1) CAAGATGG 1 chr17:75084058-75084138 ( 20) CAAGATGG 1 chr7:140186617-140186697 ( 27) CAAGATGG 1 chr21:46265386-46265466 ( 31) CAAGATGG 1 chr2:172435075-172435155 ( 43) CAAGATGG 1 chr1:20846529-20846609 ( 62) CAAGATGG 1 chr5:95043435-95043515 ( 30) CAAGATGG 1 chr17:25435112-25435192 ( 59) CAAGATGG 1 chrX:2701030-2701110 ( 15) CAAGATGG 1 chr17:47154382-47154462 ( 34) CAAGATGG 1 chr3:129895918-129895998 ( 36) CAAGATGG 1 chr19:56858850-56858930 ( 40) CAAGATGG 1 chr2:98328874-98328954 ( 14) CAAGATGG 1 chr20:36170891-36170971 ( 37) CAAGATGG 1 chr2:129201336-129201416 ( 20) CAAGATGG 1 chr2:62031502-62031582 ( 29) CAAGATGG 1 chrX:2467545-2467625 ( 57) CAAGATGG 1 chr6:2926805-2926885 ( 59) CAAGATGG 1 chr1:8998642-8998722 ( 10) CAAGATGG 1 chr16:58467684-58467764 ( 2) CAAAATGG 1 chr16:29794622-29794702 ( 17) CAAAATGG 1 chr19:21803906-21803986 ( 62) CAAAATGG 1 chr17:41430097-41430177 ( 24) CAAAATGG 1 chr5:39150236-39150316 ( 10) CAAAATGG 1 chr3:15423160-15423240 ( 55) CAAAATGG 1 chr1:211396339-211396419 ( 28) CAAAATGG 1 chr6:34688110-34688190 ( 20) CAAAATGG 1 chr3:5124170-5124250 ( 4) CAAAATGG 1 chr8:29952253-29952333 ( 2) CAAAATGG 1 chr11:9341176-9341256 ( 4) CAAAATGG 1 chr6:145171189-145171269 ( 57) CAAAATGG 1 chr22:29136260-29136340 ( 35) CAAAATGG 1 chr15:68344358-68344438 ( 67) CAAAATGG 1 chr10:104215006-10421508 ( 11) CAAAATGG 1 chr19:43949712-43949792 ( 35) CAAAATGG 1 chr9:139684097-139684177 ( 60) CAAAATGG 1 chr1:113360333-113360413 ( 18) CAAAATGG 1 chr17:15430250-15430330 ( 64) CAAAATGG 1 chr2:205219405-205219485 ( 8) TAAGATGG 1 chr18:874423-874503 ( 30) TAAGATGG 1 chr10:12307547-12307627 ( 10) TAAGATGG 1 chr7:137908471-137908551 ( 34) CAATATGG 1 chrX:113314821-113314901 ( 42) CAATATGG 1 chr17:32235490-32235570 ( 18) AAAGATGG 1 chr3:4780443-4780523 ( 35) CATGATGG 1 chr11:18713081-18713161 ( 1) CAAGATTG 1 chr2:74852978-74853058 ( 65) CAACATGG 1 chr19:35656553-35656633 ( 26) CGAGATGG 1 chr2:111449393-111449473 ( 69) CCAGATGG 1 chrX:30992018-30992098 ( 27) CAAAGTGG 1 chr8:131684327-131684407 ( 41) CAAAGTGG 1 chr7:14040888-14040968 ( 46) AAAAATGG 1 chr17:25434189-25434269 ( 26) CATAATGG 1 chr10:29100687-29100767 ( 43) CAAAATTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.05004 E= 9.0e-114 -353 201 -1309 -296 188 -435 -434 -1309 188 -1309 -1309 -354 6 -435 157 -354 188 -1309 -334 -1309 -1309 -1309 -1309 190 -1309 -1309 207 -354 -1309 -1309 210 -1309 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 87 E= 9.0e-114 0.022989 0.942529 0.000000 0.034483 0.977011 0.011494 0.011494 0.000000 0.977011 0.000000 0.000000 0.022989 0.275862 0.011494 0.689655 0.022989 0.977011 0.000000 0.022989 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.977011 0.022989 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGATGG MEME-1 regular expression -------------------------------------------------------------------------------- CAA[GA]ATGG -------------------------------------------------------------------------------- Time 4.89 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCCATCT MEME-2 width = 8 sites = 79 llr = 766 E-value = 3.8e-100 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :1::a:1: pos.-specific C a:aa::7: probability G :::::::: matrix T :9:::a2a bits 2.1 * ** 1.9 * ** * * 1.7 * **** * 1.5 ****** * Relative 1.3 ****** * Entropy 1.1 ****** * (14.0 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCCATCT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:10662516-10662596 46 1.53e-05 accagagcga ctccatct tgaatagggg chr10:71170388-71170468 33 1.53e-05 acaaaagtga ctccatct tggatgccac chr19:12993627-12993707 56 1.53e-05 acctaaccaa ctccatct tgcctttaat chr19:49385453-49385533 54 1.53e-05 GCTTTCGAAA CTCCATCT TGAACAGGGG chr8:42124064-42124144 21 1.53e-05 accagagcaa ctccatct tgaataggag chr22:39167993-39168073 56 1.53e-05 accagagcaa ctccatct tgaataggag chrX:16604175-16604255 46 1.53e-05 accagagtga ctccatct tgaatagggg chr11:86648398-86648478 35 1.53e-05 accagagcaa ctccatct tgagtagggg chr17:49512274-49512354 29 1.53e-05 acttaactga ctccatct tgcgtctaac chr20:36187878-36187958 18 1.53e-05 accagagcaa ctccatct tgaatagggg chr8:29217305-29217385 29 1.53e-05 accagagcaa ctccatct taactcggag chr20:45828644-45828724 43 1.53e-05 gccagacaga ctccatct tggctctttc chr6:2980149-2980229 30 1.53e-05 accagaccta ctccatct tgaatatggg chr21:30164064-30164144 39 1.53e-05 accagagtga ctccatct tgaatagggg chr7:73574330-73574410 65 1.53e-05 acaagagcag ctccatct tgaatagg chr1:167130632-167130712 51 1.53e-05 accagagtga ctccatct tgaatagggg chr4:57566987-57567067 66 1.53e-05 accaaagtga ctccatct ttaatag chr20:30093806-30093886 51 1.53e-05 accagagcaa ctccatct tgagtagggg chr11:61407384-61407464 26 1.53e-05 accagagcaa ctccatct tgaatagagg chr16:26981046-26981126 45 1.53e-05 accagagcga ctccatct taaatagggg chr3:186728391-186728471 29 1.53e-05 gccagacaga ctccatct tggctctttc chr5:1132018-1132098 40 1.53e-05 accagagtga ctccatct tgaacagggg chr6:42284246-42284326 52 1.53e-05 gcatggctga ctccatct tgcctctagc chr8:29474722-29474802 60 1.53e-05 accagagcaa ctccatct tgaataggga chr9:88798426-88798506 56 1.53e-05 accagagaga ctccatct tgaataggag chr19:33177937-33178017 15 1.53e-05 accagagcaa ctccatct tgtatagggg chr1:147143994-147144074 43 1.53e-05 accatagtga ctccatct tgaatagcgg chr12:7165611-7165691 62 1.53e-05 gcatgggtga ctccatct tgcctctacc chr8:41315665-41315745 38 1.53e-05 accagagcaa ctccatct tgaatggcgg chr15:68212982-68213062 46 1.53e-05 accagagcaa ctccatct tgaatagggc chr4:38319052-38319132 38 1.53e-05 accagagcaa ctccatct tgaatagggg chr17:42022589-42022669 60 1.53e-05 accacagcga ctccatct tgaacaaggg chr1:161527712-161527792 26 1.53e-05 acataactaa ctccatct tagaaaaaga chr2:9820340-9820420 39 1.53e-05 gctgaagcaa ctccatct tggatgctag chr7:36315653-36315733 32 1.53e-05 accagagtga ctccatct tgaatagggg chr5:168007905-168007985 54 1.53e-05 accagagcga ctccatct tgaataggga chr3:43729844-43729924 69 1.53e-05 gctaaagtaa ctccatct caga chrX:44244382-44244462 32 1.53e-05 accacagtga ctccatct tggaataggg chr13:96037784-96037864 64 1.53e-05 acatggttga ctccatct tgcttctga chr10:44479422-44479502 40 1.53e-05 acttaactaa ctccatct tagaaaaagg chr10:33345932-33346012 38 1.53e-05 accagagtga ctccatct tgaatagggc chr12:115642878-11564295 54 1.53e-05 gcctaaccga ctccatct tcgttctcac chr3:101350930-101351010 21 1.53e-05 gccagataga ctccatct tggctccttc chr12:132109867-13210994 55 1.53e-05 gccagacaga ctccatct tggctctttc chr4:8244740-8244820 30 1.53e-05 accagagcag ctccatct tgaatggggg chr10:13580066-13580146 2 1.53e-05 a ctccatct tgaatgggag chr16:65798804-65798884 58 1.53e-05 accagagtga ctccatct tgaataggac chr8:39801982-39802062 15 1.53e-05 gccagacaga ctccatct tggctctttc chr3:32098190-32098270 67 1.53e-05 accagagcaa ctccatct tgaaaa chr1:222135882-222135962 62 3.28e-05 gcatgggtga ctccattt tgatttttag chr6:37396486-37396566 72 3.28e-05 acatgagtga ctccattt t chr20:49125567-49125647 40 3.28e-05 gcatgagtga ctccattt tgatttttag chr3:32090137-32090217 71 3.28e-05 accagagcaa ctccattt tg chr9:99994415-99994495 69 3.28e-05 acataagaga ctccattt tgtt chr22:23878288-23878368 27 3.28e-05 acataagaga ctccattt tgttctgtac chr10:28674865-28674945 43 3.28e-05 accagagaga ctccattt tgaatagggg chr3:14314357-14314437 52 3.28e-05 acataagaga ctccattt tgttctgtac chr17:18719940-18720020 41 3.28e-05 ccgtgagtaa ctccattt tggtttggtc chr11:76522467-76522547 58 3.28e-05 acatgagcga ctccattt tggtttggtt chr19:35411123-35411203 25 3.28e-05 acataagaga ctccattt tgttctgtac chr22:23781916-23781996 47 3.28e-05 accagagtga ctccattt tgaataagga chr5:67924059-67924139 38 3.28e-05 accagagcaa ctccattt tgaatagaag chr11:76764479-76764559 39 3.28e-05 accagagcaa ctccattt tgaacacggg chr16:25565141-25565221 23 5.01e-05 gctcaaatta ctccatat tgctttgctc chr5:36442504-36442584 46 5.01e-05 gtttgagtta ctccatat tgctttgttc chr10:89410768-89410848 34 5.01e-05 accagagtga ctccatat tgaacagggg chr2:174156182-174156262 70 5.01e-05 gcttgagtca ctccatat tgc chr7:48512404-48512484 21 5.01e-05 gcctaagtta ctccatat tgcttatctc chr17:13542281-13542361 41 6.53e-05 accaaagcga caccatct tgaatagggg chr2:87816013-87816093 69 6.53e-05 acgtaagtga caccatct taga chr22:29136260-29136340 56 6.53e-05 tcctaacaga caccatct tgctgtcact chr6:145171189-145171269 30 7.88e-05 TGAATTTTTG CTCCCTCT AACATGGCAA chr9:102796313-102796393 18 9.40e-05 accagagtga ctccatgt tgcatagggg chr16:17684940-17685020 55 1.07e-04 accagagtga ccccatct tgaataaggg chr5:68387004-68387084 71 1.51e-04 gtccaaactg caccattt tg chr2:171218993-171219073 68 1.51e-04 TTCAAAAGCT CTCCATCC TACCT chr17:14426261-14426341 20 1.51e-04 ggcttccata CTCCACCt ccctaatcca chr17:41430097-41430177 70 1.67e-04 tatctcccca ctcccttt aca chrX:47668987-47669067 39 1.67e-04 aTAttccccc ctcccttt tacaagggaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:10662516-10662596 1.5e-05 45_[+2]_27 chr10:71170388-71170468 1.5e-05 32_[+2]_40 chr19:12993627-12993707 1.5e-05 55_[+2]_17 chr19:49385453-49385533 1.5e-05 53_[+2]_19 chr8:42124064-42124144 1.5e-05 20_[+2]_52 chr22:39167993-39168073 1.5e-05 55_[+2]_17 chrX:16604175-16604255 1.5e-05 45_[+2]_27 chr11:86648398-86648478 1.5e-05 34_[+2]_38 chr17:49512274-49512354 1.5e-05 28_[+2]_44 chr20:36187878-36187958 1.5e-05 17_[+2]_55 chr8:29217305-29217385 1.5e-05 28_[+2]_44 chr20:45828644-45828724 1.5e-05 42_[+2]_30 chr6:2980149-2980229 1.5e-05 29_[+2]_43 chr21:30164064-30164144 1.5e-05 38_[+2]_34 chr7:73574330-73574410 1.5e-05 64_[+2]_8 chr1:167130632-167130712 1.5e-05 50_[+2]_22 chr4:57566987-57567067 1.5e-05 65_[+2]_7 chr20:30093806-30093886 1.5e-05 50_[+2]_22 chr11:61407384-61407464 1.5e-05 25_[+2]_47 chr16:26981046-26981126 1.5e-05 44_[+2]_28 chr3:186728391-186728471 1.5e-05 28_[+2]_44 chr5:1132018-1132098 1.5e-05 39_[+2]_33 chr6:42284246-42284326 1.5e-05 51_[+2]_21 chr8:29474722-29474802 1.5e-05 59_[+2]_13 chr9:88798426-88798506 1.5e-05 55_[+2]_17 chr19:33177937-33178017 1.5e-05 14_[+2]_58 chr1:147143994-147144074 1.5e-05 42_[+2]_30 chr12:7165611-7165691 1.5e-05 61_[+2]_11 chr8:41315665-41315745 1.5e-05 37_[+2]_35 chr15:68212982-68213062 1.5e-05 45_[+2]_27 chr4:38319052-38319132 1.5e-05 37_[+2]_35 chr17:42022589-42022669 1.5e-05 59_[+2]_13 chr1:161527712-161527792 1.5e-05 25_[+2]_47 chr2:9820340-9820420 1.5e-05 38_[+2]_34 chr7:36315653-36315733 1.5e-05 31_[+2]_41 chr5:168007905-168007985 1.5e-05 53_[+2]_19 chr3:43729844-43729924 1.5e-05 68_[+2]_4 chrX:44244382-44244462 1.5e-05 31_[+2]_41 chr13:96037784-96037864 1.5e-05 63_[+2]_9 chr10:44479422-44479502 1.5e-05 39_[+2]_33 chr10:33345932-33346012 1.5e-05 37_[+2]_35 chr12:115642878-11564295 1.5e-05 53_[+2]_19 chr3:101350930-101351010 1.5e-05 20_[+2]_52 chr12:132109867-13210994 1.5e-05 54_[+2]_18 chr4:8244740-8244820 1.5e-05 29_[+2]_43 chr10:13580066-13580146 1.5e-05 1_[+2]_71 chr16:65798804-65798884 1.5e-05 57_[+2]_15 chr8:39801982-39802062 1.5e-05 14_[+2]_58 chr3:32098190-32098270 1.5e-05 66_[+2]_6 chr1:222135882-222135962 3.3e-05 61_[+2]_11 chr6:37396486-37396566 3.3e-05 71_[+2]_1 chr20:49125567-49125647 3.3e-05 39_[+2]_33 chr3:32090137-32090217 3.3e-05 70_[+2]_2 chr9:99994415-99994495 3.3e-05 68_[+2]_4 chr22:23878288-23878368 3.3e-05 26_[+2]_46 chr10:28674865-28674945 3.3e-05 42_[+2]_30 chr3:14314357-14314437 3.3e-05 51_[+2]_21 chr17:18719940-18720020 3.3e-05 40_[+2]_32 chr11:76522467-76522547 3.3e-05 57_[+2]_15 chr19:35411123-35411203 3.3e-05 24_[+2]_48 chr22:23781916-23781996 3.3e-05 46_[+2]_26 chr5:67924059-67924139 3.3e-05 37_[+2]_35 chr11:76764479-76764559 3.3e-05 38_[+2]_34 chr16:25565141-25565221 5e-05 22_[+2]_50 chr5:36442504-36442584 5e-05 45_[+2]_27 chr10:89410768-89410848 5e-05 33_[+2]_39 chr2:174156182-174156262 5e-05 69_[+2]_3 chr7:48512404-48512484 5e-05 20_[+2]_52 chr17:13542281-13542361 6.5e-05 40_[+2]_32 chr2:87816013-87816093 6.5e-05 68_[+2]_4 chr22:29136260-29136340 6.5e-05 55_[+2]_17 chr6:145171189-145171269 7.9e-05 29_[+2]_43 chr9:102796313-102796393 9.4e-05 17_[+2]_55 chr16:17684940-17685020 0.00011 54_[+2]_18 chr5:68387004-68387084 0.00015 70_[+2]_2 chr2:171218993-171219073 0.00015 67_[+2]_5 chr17:14426261-14426341 0.00015 19_[+2]_53 chr17:41430097-41430177 0.00017 69_[+2]_3 chrX:47668987-47669067 0.00017 38_[+2]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCCATCT width=8 seqs=79 chr6:10662516-10662596 ( 46) CTCCATCT 1 chr10:71170388-71170468 ( 33) CTCCATCT 1 chr19:12993627-12993707 ( 56) CTCCATCT 1 chr19:49385453-49385533 ( 54) CTCCATCT 1 chr8:42124064-42124144 ( 21) CTCCATCT 1 chr22:39167993-39168073 ( 56) CTCCATCT 1 chrX:16604175-16604255 ( 46) CTCCATCT 1 chr11:86648398-86648478 ( 35) CTCCATCT 1 chr17:49512274-49512354 ( 29) CTCCATCT 1 chr20:36187878-36187958 ( 18) CTCCATCT 1 chr8:29217305-29217385 ( 29) CTCCATCT 1 chr20:45828644-45828724 ( 43) CTCCATCT 1 chr6:2980149-2980229 ( 30) CTCCATCT 1 chr21:30164064-30164144 ( 39) CTCCATCT 1 chr7:73574330-73574410 ( 65) CTCCATCT 1 chr1:167130632-167130712 ( 51) CTCCATCT 1 chr4:57566987-57567067 ( 66) CTCCATCT 1 chr20:30093806-30093886 ( 51) CTCCATCT 1 chr11:61407384-61407464 ( 26) CTCCATCT 1 chr16:26981046-26981126 ( 45) CTCCATCT 1 chr3:186728391-186728471 ( 29) CTCCATCT 1 chr5:1132018-1132098 ( 40) CTCCATCT 1 chr6:42284246-42284326 ( 52) CTCCATCT 1 chr8:29474722-29474802 ( 60) CTCCATCT 1 chr9:88798426-88798506 ( 56) CTCCATCT 1 chr19:33177937-33178017 ( 15) CTCCATCT 1 chr1:147143994-147144074 ( 43) CTCCATCT 1 chr12:7165611-7165691 ( 62) CTCCATCT 1 chr8:41315665-41315745 ( 38) CTCCATCT 1 chr15:68212982-68213062 ( 46) CTCCATCT 1 chr4:38319052-38319132 ( 38) CTCCATCT 1 chr17:42022589-42022669 ( 60) CTCCATCT 1 chr1:161527712-161527792 ( 26) CTCCATCT 1 chr2:9820340-9820420 ( 39) CTCCATCT 1 chr7:36315653-36315733 ( 32) CTCCATCT 1 chr5:168007905-168007985 ( 54) CTCCATCT 1 chr3:43729844-43729924 ( 69) CTCCATCT 1 chrX:44244382-44244462 ( 32) CTCCATCT 1 chr13:96037784-96037864 ( 64) CTCCATCT 1 chr10:44479422-44479502 ( 40) CTCCATCT 1 chr10:33345932-33346012 ( 38) CTCCATCT 1 chr12:115642878-11564295 ( 54) CTCCATCT 1 chr3:101350930-101351010 ( 21) CTCCATCT 1 chr12:132109867-13210994 ( 55) CTCCATCT 1 chr4:8244740-8244820 ( 30) CTCCATCT 1 chr10:13580066-13580146 ( 2) CTCCATCT 1 chr16:65798804-65798884 ( 58) CTCCATCT 1 chr8:39801982-39802062 ( 15) CTCCATCT 1 chr3:32098190-32098270 ( 67) CTCCATCT 1 chr1:222135882-222135962 ( 62) CTCCATTT 1 chr6:37396486-37396566 ( 72) CTCCATTT 1 chr20:49125567-49125647 ( 40) CTCCATTT 1 chr3:32090137-32090217 ( 71) CTCCATTT 1 chr9:99994415-99994495 ( 69) CTCCATTT 1 chr22:23878288-23878368 ( 27) CTCCATTT 1 chr10:28674865-28674945 ( 43) CTCCATTT 1 chr3:14314357-14314437 ( 52) CTCCATTT 1 chr17:18719940-18720020 ( 41) CTCCATTT 1 chr11:76522467-76522547 ( 58) CTCCATTT 1 chr19:35411123-35411203 ( 25) CTCCATTT 1 chr22:23781916-23781996 ( 47) CTCCATTT 1 chr5:67924059-67924139 ( 38) CTCCATTT 1 chr11:76764479-76764559 ( 39) CTCCATTT 1 chr16:25565141-25565221 ( 23) CTCCATAT 1 chr5:36442504-36442584 ( 46) CTCCATAT 1 chr10:89410768-89410848 ( 34) CTCCATAT 1 chr2:174156182-174156262 ( 70) CTCCATAT 1 chr7:48512404-48512484 ( 21) CTCCATAT 1 chr17:13542281-13542361 ( 41) CACCATCT 1 chr2:87816013-87816093 ( 69) CACCATCT 1 chr22:29136260-29136340 ( 56) CACCATCT 1 chr6:145171189-145171269 ( 30) CTCCCTCT 1 chr9:102796313-102796393 ( 18) CTCCATGT 1 chr16:17684940-17685020 ( 55) CCCCATCT 1 chr5:68387004-68387084 ( 71) CACCATTT 1 chr2:171218993-171219073 ( 68) CTCCATCC 1 chr17:14426261-14426341 ( 20) CTCCACCT 1 chr17:41430097-41430177 ( 70) CTCCCTTT 1 chrX:47668987-47669067 ( 39) CTCCCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.08421 E= 3.8e-100 -1295 209 -1295 -1295 -239 -421 -1295 181 -1295 209 -1295 -1295 -1295 209 -1295 -1295 186 -262 -1295 -1295 -1295 -421 -1295 188 -207 160 -420 -31 -1295 -421 -1295 188 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 79 E= 3.8e-100 0.000000 1.000000 0.000000 0.000000 0.050633 0.012658 0.000000 0.936709 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.962025 0.037975 0.000000 0.000000 0.000000 0.012658 0.000000 0.987342 0.063291 0.708861 0.012658 0.215190 0.000000 0.012658 0.000000 0.987342 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATCT MEME-2 regular expression -------------------------------------------------------------------------------- CTCCAT[CT]T -------------------------------------------------------------------------------- Time 8.42 secs. ******************************************************************************** ******************************************************************************** MOTIF GAACCAGA MEME-3 width = 8 sites = 46 llr = 465 E-value = 8.8e-050 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a9::a:a pos.-specific C :::aa::: probability G a:1:::a: matrix T :::::::: bits 2.1 * 1.9 * ***** 1.7 ** ***** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (14.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAACCAGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:10662516-10662596 34 1.47e-05 agagtcattt gaaccaga gcgactccat chr6:158130771-158130851 5 1.47e-05 gtgt gaaccaga gcaactccgt chr15:90325462-90325542 72 1.47e-05 agaggtgttt gaaccaga g chr8:42124064-42124144 9 1.47e-05 aagcattt gaaccaga gcaactccat chr22:39167993-39168073 44 1.47e-05 agaggcttgt gaaccaga gcaactccat chrX:16604175-16604255 34 1.47e-05 agaggcattt gaaccaga gtgactccat chr11:86648398-86648478 23 1.47e-05 agaggcgtct gaaccaga gcaactccat chr20:36187878-36187958 6 1.47e-05 tgttt gaaccaga gcaactccat chr8:29217305-29217385 17 1.47e-05 agaggcatgt gaaccaga gcaactccat chr6:2980149-2980229 18 1.47e-05 agaggcattt gaaccaga cctactccat chr1:167130632-167130712 39 1.47e-05 agaggcatgt gaaccaga gtgactccat chr3:32090137-32090217 59 1.47e-05 agaggtgttt gaaccaga gcaactccat chr20:30093806-30093886 39 1.47e-05 agaggtgctt gaaccaga gcaactccat chr11:61407384-61407464 14 1.47e-05 agagatgttt gaaccaga gcaactccat chr10:28674865-28674945 31 1.47e-05 aaaagcgctt gaaccaga gagactccat chr16:17684940-17685020 43 1.47e-05 agaggcattt gaaccaga gtgaccccat chr16:26981046-26981126 33 1.47e-05 agaggtgttc gaaccaga gcgactccat chr5:1132018-1132098 28 1.47e-05 aggggcgttt gaaccaga gtgactccat chr8:29474722-29474802 48 1.47e-05 agagatgttc gaaccaga gcaactccat chr19:33177937-33178017 3 1.47e-05 tt gaaccaga gcaactccat chr10:89410768-89410848 22 1.47e-05 agaggcattt gaaccaga gtgactccat chr8:41315665-41315745 26 1.47e-05 agaggtattt gaaccaga gcaactccat chr7:30767706-30767786 62 1.47e-05 agaggtgtgt gaaccaga gcaactccat chr15:68212982-68213062 34 1.47e-05 agaggcattt gaaccaga gcaactccat chr4:38319052-38319132 26 1.47e-05 agaagcgttt gaaccaga gcaactccat chr7:36315653-36315733 20 1.47e-05 agaggcattt gaaccaga gtgactccat chr20:4199271-4199351 66 1.47e-05 agaggtactg gaaccaga gtgactc chr22:23781916-23781996 35 1.47e-05 agaggcattt gaaccaga gtgactccat chr4:8244740-8244820 18 1.47e-05 agagacatgt gaaccaga gcagctccat chr5:67924059-67924139 26 1.47e-05 agaggtgttt gaaccaga gcaactccat chr11:76764479-76764559 27 1.47e-05 agaggcgtta gaaccaga gcaactccat chr16:65798804-65798884 46 1.47e-05 agaggcattt gaaccaga gtgactccat chr3:32098190-32098270 55 1.47e-05 agagccgttt gaaccaga gcaactccat chr2:103039974-103040054 66 2.75e-05 GACGAGGGAT GAGCCAGA GTTCTAC chr20:45828644-45828724 31 2.75e-05 ttagctaaga gagccaga cagactccat chr3:186728391-186728471 17 2.75e-05 ttagctaaga gagccaga cagactccat chr3:101350930-101351010 9 2.75e-05 agctgaga gagccaga tagactccat chr12:132109867-13210994 43 2.75e-05 ttggctaaga gagccaga cagactccat chr8:39801982-39802062 3 2.75e-05 ga gagccaga cagactccat chr17:42022589-42022669 48 4.23e-05 agaggcgttt gaaccaca gcgactccat chrX:44244382-44244462 20 4.23e-05 agaggcattt gaaccaca gtgactccat chr10:29100687-29100767 63 7.57e-05 agagatgctt gaactaga gcgactccat chr21:19062505-19062585 67 7.57e-05 aggggcattt gaactaga gtgact chr9:102796313-102796393 6 7.57e-05 cgttc aaaccaga gtgactccat chr10:33345932-33346012 26 7.57e-05 agaggcattc aaaccaga gtgactccat chr9:88798426-88798506 44 8.86e-05 agaggcattt ggaccaga gagactccat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:10662516-10662596 1.5e-05 33_[+3]_39 chr6:158130771-158130851 1.5e-05 4_[+3]_68 chr15:90325462-90325542 1.5e-05 71_[+3]_1 chr8:42124064-42124144 1.5e-05 8_[+3]_64 chr22:39167993-39168073 1.5e-05 43_[+3]_29 chrX:16604175-16604255 1.5e-05 33_[+3]_39 chr11:86648398-86648478 1.5e-05 22_[+3]_50 chr20:36187878-36187958 1.5e-05 5_[+3]_67 chr8:29217305-29217385 1.5e-05 16_[+3]_56 chr6:2980149-2980229 1.5e-05 17_[+3]_55 chr1:167130632-167130712 1.5e-05 38_[+3]_34 chr3:32090137-32090217 1.5e-05 58_[+3]_14 chr20:30093806-30093886 1.5e-05 38_[+3]_34 chr11:61407384-61407464 1.5e-05 13_[+3]_59 chr10:28674865-28674945 1.5e-05 30_[+3]_42 chr16:17684940-17685020 1.5e-05 42_[+3]_30 chr16:26981046-26981126 1.5e-05 32_[+3]_40 chr5:1132018-1132098 1.5e-05 27_[+3]_45 chr8:29474722-29474802 1.5e-05 47_[+3]_25 chr19:33177937-33178017 1.5e-05 2_[+3]_70 chr10:89410768-89410848 1.5e-05 21_[+3]_51 chr8:41315665-41315745 1.5e-05 25_[+3]_47 chr7:30767706-30767786 1.5e-05 61_[+3]_11 chr15:68212982-68213062 1.5e-05 33_[+3]_39 chr4:38319052-38319132 1.5e-05 25_[+3]_47 chr7:36315653-36315733 1.5e-05 19_[+3]_53 chr20:4199271-4199351 1.5e-05 65_[+3]_7 chr22:23781916-23781996 1.5e-05 34_[+3]_38 chr4:8244740-8244820 1.5e-05 17_[+3]_55 chr5:67924059-67924139 1.5e-05 25_[+3]_47 chr11:76764479-76764559 1.5e-05 26_[+3]_46 chr16:65798804-65798884 1.5e-05 45_[+3]_27 chr3:32098190-32098270 1.5e-05 54_[+3]_18 chr2:103039974-103040054 2.8e-05 65_[+3]_7 chr20:45828644-45828724 2.8e-05 30_[+3]_42 chr3:186728391-186728471 2.8e-05 16_[+3]_56 chr3:101350930-101351010 2.8e-05 8_[+3]_64 chr12:132109867-13210994 2.8e-05 42_[+3]_30 chr8:39801982-39802062 2.8e-05 2_[+3]_70 chr17:42022589-42022669 4.2e-05 47_[+3]_25 chrX:44244382-44244462 4.2e-05 19_[+3]_53 chr10:29100687-29100767 7.6e-05 62_[+3]_10 chr21:19062505-19062585 7.6e-05 66_[+3]_6 chr9:102796313-102796393 7.6e-05 5_[+3]_67 chr10:33345932-33346012 7.6e-05 25_[+3]_47 chr9:88798426-88798506 8.9e-05 43_[+3]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAACCAGA width=8 seqs=46 chr6:10662516-10662596 ( 34) GAACCAGA 1 chr6:158130771-158130851 ( 5) GAACCAGA 1 chr15:90325462-90325542 ( 72) GAACCAGA 1 chr8:42124064-42124144 ( 9) GAACCAGA 1 chr22:39167993-39168073 ( 44) GAACCAGA 1 chrX:16604175-16604255 ( 34) GAACCAGA 1 chr11:86648398-86648478 ( 23) GAACCAGA 1 chr20:36187878-36187958 ( 6) GAACCAGA 1 chr8:29217305-29217385 ( 17) GAACCAGA 1 chr6:2980149-2980229 ( 18) GAACCAGA 1 chr1:167130632-167130712 ( 39) GAACCAGA 1 chr3:32090137-32090217 ( 59) GAACCAGA 1 chr20:30093806-30093886 ( 39) GAACCAGA 1 chr11:61407384-61407464 ( 14) GAACCAGA 1 chr10:28674865-28674945 ( 31) GAACCAGA 1 chr16:17684940-17685020 ( 43) GAACCAGA 1 chr16:26981046-26981126 ( 33) GAACCAGA 1 chr5:1132018-1132098 ( 28) GAACCAGA 1 chr8:29474722-29474802 ( 48) GAACCAGA 1 chr19:33177937-33178017 ( 3) GAACCAGA 1 chr10:89410768-89410848 ( 22) GAACCAGA 1 chr8:41315665-41315745 ( 26) GAACCAGA 1 chr7:30767706-30767786 ( 62) GAACCAGA 1 chr15:68212982-68213062 ( 34) GAACCAGA 1 chr4:38319052-38319132 ( 26) GAACCAGA 1 chr7:36315653-36315733 ( 20) GAACCAGA 1 chr20:4199271-4199351 ( 66) GAACCAGA 1 chr22:23781916-23781996 ( 35) GAACCAGA 1 chr4:8244740-8244820 ( 18) GAACCAGA 1 chr5:67924059-67924139 ( 26) GAACCAGA 1 chr11:76764479-76764559 ( 27) GAACCAGA 1 chr16:65798804-65798884 ( 46) GAACCAGA 1 chr3:32098190-32098270 ( 55) GAACCAGA 1 chr2:103039974-103040054 ( 66) GAGCCAGA 1 chr20:45828644-45828724 ( 31) GAGCCAGA 1 chr3:186728391-186728471 ( 17) GAGCCAGA 1 chr3:101350930-101351010 ( 9) GAGCCAGA 1 chr12:132109867-13210994 ( 43) GAGCCAGA 1 chr8:39801982-39802062 ( 3) GAGCCAGA 1 chr17:42022589-42022669 ( 48) GAACCACA 1 chrX:44244382-44244462 ( 20) GAACCACA 1 chr10:29100687-29100767 ( 63) GAACTAGA 1 chr21:19062505-19062585 ( 67) GAACTAGA 1 chr9:102796313-102796393 ( 6) AAACCAGA 1 chr10:33345932-33346012 ( 26) AAACCAGA 1 chr9:88798426-88798506 ( 44) GGACCAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.03184 E= 8.8e-050 -261 -1217 204 -1217 188 -1217 -342 -1217 171 -1217 -84 -1217 -1217 209 -1217 -1217 -1217 203 -1217 -262 191 -1217 -1217 -1217 -1217 -243 204 -1217 191 -1217 -1217 -1217 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 46 E= 8.8e-050 0.043478 0.000000 0.956522 0.000000 0.978261 0.000000 0.021739 0.000000 0.869565 0.000000 0.130435 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.956522 0.000000 0.043478 1.000000 0.000000 0.000000 0.000000 0.000000 0.043478 0.956522 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAACCAGA MEME-3 regular expression -------------------------------------------------------------------------------- GAACCAGA -------------------------------------------------------------------------------- Time 11.83 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTCAGAG MEME-4 width = 8 sites = 60 llr = 526 E-value = 2.4e-040 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::31a:91 pos.-specific C :::8:::: probability G :a:::a1a matrix T a:8::11: bits 2.1 1.9 * ** * 1.7 ** ** * 1.5 ** ** * Relative 1.3 ** ***** Entropy 1.1 ******** (12.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGTCAGAG consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:37396486-37396566 48 1.49e-05 gtgcctggcc tgtcagag ttttaaacat chr22:39167993-39168073 30 1.49e-05 GCTGTTGTCA tgtcagag gcttgtgaac chr12:68745917-68745997 63 1.49e-05 ggggaaaaca tgtcagag gcatttgaac chr11:86648398-86648478 9 1.49e-05 TATAGAAT tgtcagag gcgtctgaac chr10:95034253-95034333 66 1.49e-05 aaaatcatta tgtcagag gccagag chr8:29217305-29217385 3 1.49e-05 AG tgtcagag gcatgtgaac chr6:2980149-2980229 4 1.49e-05 TTT tgtcagag gcatttgaac chr7:73574330-73574410 39 1.49e-05 TGAGCCCAGT tgtcagag gcgttcaaac chr1:167130632-167130712 25 1.49e-05 GTGGTGGATG tgtcagag gcatgtgaac chr4:57566987-57567067 40 1.49e-05 ctgcttacac tgtcagag gcattctaac chr3:32090137-32090217 45 1.49e-05 CAGCTGGTCA tgtcagag gtgtttgaac chr20:30093806-30093886 25 1.49e-05 TATATACCTT tgtcagag gtgcttgaac chr16:17684940-17685020 29 1.49e-05 AGGTTAGTAC tgtcagag gcatttgaac chr16:26981046-26981126 19 1.49e-05 ttggtctcct tgtcagag gtgttcgaac chr8:29474722-29474802 34 1.49e-05 ATGCTGACAT tgtcagag atgttcgaac chr9:88798426-88798506 30 1.49e-05 cctCTGGTGG tgtcagag gcatttggac chr1:147143994-147144074 17 1.49e-05 aaggtgattc tgtcagag gcatttgaac chr8:41315665-41315745 12 1.49e-05 acactaatga tgtcagag gtatttgaac chr7:30767706-30767786 48 1.49e-05 ttcccccttc tgtcagag gtgtgtgaac chr15:68212982-68213062 20 1.49e-05 agcatgatgt tgtcagag gcatttgaac chr17:42022589-42022669 34 1.49e-05 GATGTGTTCC tgtcagag gcgtttgaac chr20:4199271-4199351 52 1.49e-05 CATGTGGGAC tgtcagag gtactggaac chr5:168007905-168007985 30 1.49e-05 atagcaactg tgtcagag gcatttacca chrX:44244382-44244462 6 1.49e-05 GGTAT tgtcagag gcatttgaac chr10:33345932-33346012 12 1.49e-05 tgagtcacca tgtcagag gcattcaaac chr4:8244740-8244820 4 1.49e-05 ACT tgtcagag acatgtgaac chr5:67924059-67924139 12 1.49e-05 tgtgaccttg tgtcagag gtgtttgaac chr11:76764479-76764559 13 1.49e-05 CAGGTCTCTC tgtcagag gcgttagaac chr16:65798804-65798884 32 1.49e-05 ctccagggac tgtcagag gcatttgaac chr3:32098190-32098270 41 1.49e-05 gagggacata tgtcagag ccgtttgaac chr14:102154568-10215464 52 2.97e-05 TTGGTGTCAG tgacagag cagaagcact chr4:4325791-4325871 41 2.97e-05 atctcctcaa tgacagag caggagcact chr7:133895188-133895268 40 4.66e-05 AGGGCCATCT TGTAAGAG AGAGATTTTT chr19:12993627-12993707 27 6.17e-05 cagaaaatta tgtcagtg aaagagctct chr16:25565141-25565221 56 7.48e-05 actgcacatg tgtcaggg aatggaattt chr21:19062505-19062585 53 7.48e-05 CAAGTCCTCA tgtcaggg gcatttgaac chr5:1132018-1132098 14 7.48e-05 CCCCTGGTTC tgtcaggg gcgtttgaac chr7:138777023-138777103 15 9.15e-05 gggctgccag tgaaagag ccaagatgga chr17:49512274-49512354 6 9.15e-05 gacag tgaaagag atctaactta chr3:44509734-44509814 51 9.15e-05 actgagacag tgaaagag atctaactta chr5:95043435-95043515 21 9.15e-05 gagctgccag tgaaagag ccaagatgga chr3:129895918-129895998 27 9.15e-05 gggctgccag tgaaagag ccaagatgga chr2:98328874-98328954 5 9.15e-05 caaa tgaaagag ccaagatgga chr3:14293112-14293192 63 1.26e-04 tttctcttac tgtcagaa tgttGCAAAA chr6:16044718-16044798 46 1.26e-04 ACACTAAATA TGTCATAG TGAACTCATC chr2:87816013-87816093 25 1.26e-04 CTAAGGGAGC TGTCATAG GTTCTTCCCt chr4:38319052-38319132 12 1.26e-04 GAAGCCATTG tgtcagaa gcgtttgaac chr16:15664979-15665059 61 1.41e-04 caaacccttc tgacagtg acaaccaaaa chr6:42284246-42284326 23 1.41e-04 gcaaagatta tgacagtg acaggagtct chr12:7165611-7165691 33 1.41e-04 gcaaagatga tgacagtg agggaagtct chr13:96037784-96037864 36 1.41e-04 tgcaaaatta tgacagtg agcaaatctg chr19:49385453-49385533 36 1.73e-04 GCTGTGGTTT TCTCAGAG GCTTTCGAAA chr3:10018080-10018160 71 1.73e-04 AAGTAGAAAA TGTTAGAG CC chr10:89410768-89410848 8 1.73e-04 CACAAAC tgttagag gcatttgaac chrX:16604175-16604255 20 2.01e-04 CACCTGACAT tgtgagag gcatttgaac chr15:90325462-90325542 58 2.14e-04 CAGGTGGCAT Cgtcagag gtgtttgaac chr19:56858850-56858930 25 2.31e-04 agtaaggggc tgtaagtg aaggagccaa chr6:33345587-33345667 66 2.64e-04 caaatgtctc tgacaGAA TGGAAGT chr5:90587952-90588032 63 2.64e-04 cctctgcctc tgacatag gggtgaggct chr10:44479422-44479502 71 2.96e-04 cattttatgt tcacagag ca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:37396486-37396566 1.5e-05 47_[+4]_25 chr22:39167993-39168073 1.5e-05 29_[+4]_43 chr12:68745917-68745997 1.5e-05 62_[+4]_10 chr11:86648398-86648478 1.5e-05 8_[+4]_64 chr10:95034253-95034333 1.5e-05 65_[+4]_7 chr8:29217305-29217385 1.5e-05 2_[+4]_70 chr6:2980149-2980229 1.5e-05 3_[+4]_69 chr7:73574330-73574410 1.5e-05 38_[+4]_34 chr1:167130632-167130712 1.5e-05 24_[+4]_48 chr4:57566987-57567067 1.5e-05 39_[+4]_33 chr3:32090137-32090217 1.5e-05 44_[+4]_28 chr20:30093806-30093886 1.5e-05 24_[+4]_48 chr16:17684940-17685020 1.5e-05 28_[+4]_44 chr16:26981046-26981126 1.5e-05 18_[+4]_54 chr8:29474722-29474802 1.5e-05 33_[+4]_39 chr9:88798426-88798506 1.5e-05 29_[+4]_43 chr1:147143994-147144074 1.5e-05 16_[+4]_56 chr8:41315665-41315745 1.5e-05 11_[+4]_61 chr7:30767706-30767786 1.5e-05 47_[+4]_25 chr15:68212982-68213062 1.5e-05 19_[+4]_53 chr17:42022589-42022669 1.5e-05 33_[+4]_39 chr20:4199271-4199351 1.5e-05 51_[+4]_21 chr5:168007905-168007985 1.5e-05 29_[+4]_43 chrX:44244382-44244462 1.5e-05 5_[+4]_67 chr10:33345932-33346012 1.5e-05 11_[+4]_61 chr4:8244740-8244820 1.5e-05 3_[+4]_69 chr5:67924059-67924139 1.5e-05 11_[+4]_61 chr11:76764479-76764559 1.5e-05 12_[+4]_60 chr16:65798804-65798884 1.5e-05 31_[+4]_41 chr3:32098190-32098270 1.5e-05 40_[+4]_32 chr14:102154568-10215464 3e-05 51_[+4]_21 chr4:4325791-4325871 3e-05 40_[+4]_32 chr7:133895188-133895268 4.7e-05 39_[+4]_33 chr19:12993627-12993707 6.2e-05 26_[+4]_46 chr16:25565141-25565221 7.5e-05 55_[+4]_17 chr21:19062505-19062585 7.5e-05 52_[+4]_20 chr5:1132018-1132098 7.5e-05 13_[+4]_59 chr7:138777023-138777103 9.2e-05 14_[+4]_58 chr17:49512274-49512354 9.2e-05 5_[+4]_67 chr3:44509734-44509814 9.2e-05 50_[+4]_22 chr5:95043435-95043515 9.2e-05 20_[+4]_52 chr3:129895918-129895998 9.2e-05 26_[+4]_46 chr2:98328874-98328954 9.2e-05 4_[+4]_68 chr3:14293112-14293192 0.00013 62_[+4]_10 chr6:16044718-16044798 0.00013 45_[+4]_27 chr2:87816013-87816093 0.00013 24_[+4]_48 chr4:38319052-38319132 0.00013 11_[+4]_61 chr16:15664979-15665059 0.00014 60_[+4]_12 chr6:42284246-42284326 0.00014 22_[+4]_50 chr12:7165611-7165691 0.00014 32_[+4]_40 chr13:96037784-96037864 0.00014 35_[+4]_37 chr19:49385453-49385533 0.00017 35_[+4]_37 chr3:10018080-10018160 0.00017 70_[+4]_2 chr10:89410768-89410848 0.00017 7_[+4]_65 chrX:16604175-16604255 0.0002 19_[+4]_53 chr15:90325462-90325542 0.00021 57_[+4]_15 chr19:56858850-56858930 0.00023 24_[+4]_48 chr6:33345587-33345667 0.00026 65_[+4]_7 chr5:90587952-90588032 0.00026 62_[+4]_10 chr10:44479422-44479502 0.0003 70_[+4]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTCAGAG width=8 seqs=60 chr6:37396486-37396566 ( 48) TGTCAGAG 1 chr22:39167993-39168073 ( 30) TGTCAGAG 1 chr12:68745917-68745997 ( 63) TGTCAGAG 1 chr11:86648398-86648478 ( 9) TGTCAGAG 1 chr10:95034253-95034333 ( 66) TGTCAGAG 1 chr8:29217305-29217385 ( 3) TGTCAGAG 1 chr6:2980149-2980229 ( 4) TGTCAGAG 1 chr7:73574330-73574410 ( 39) TGTCAGAG 1 chr1:167130632-167130712 ( 25) TGTCAGAG 1 chr4:57566987-57567067 ( 40) TGTCAGAG 1 chr3:32090137-32090217 ( 45) TGTCAGAG 1 chr20:30093806-30093886 ( 25) TGTCAGAG 1 chr16:17684940-17685020 ( 29) TGTCAGAG 1 chr16:26981046-26981126 ( 19) TGTCAGAG 1 chr8:29474722-29474802 ( 34) TGTCAGAG 1 chr9:88798426-88798506 ( 30) TGTCAGAG 1 chr1:147143994-147144074 ( 17) TGTCAGAG 1 chr8:41315665-41315745 ( 12) TGTCAGAG 1 chr7:30767706-30767786 ( 48) TGTCAGAG 1 chr15:68212982-68213062 ( 20) TGTCAGAG 1 chr17:42022589-42022669 ( 34) TGTCAGAG 1 chr20:4199271-4199351 ( 52) TGTCAGAG 1 chr5:168007905-168007985 ( 30) TGTCAGAG 1 chrX:44244382-44244462 ( 6) TGTCAGAG 1 chr10:33345932-33346012 ( 12) TGTCAGAG 1 chr4:8244740-8244820 ( 4) TGTCAGAG 1 chr5:67924059-67924139 ( 12) TGTCAGAG 1 chr11:76764479-76764559 ( 13) TGTCAGAG 1 chr16:65798804-65798884 ( 32) TGTCAGAG 1 chr3:32098190-32098270 ( 41) TGTCAGAG 1 chr14:102154568-10215464 ( 52) TGACAGAG 1 chr4:4325791-4325871 ( 41) TGACAGAG 1 chr7:133895188-133895268 ( 40) TGTAAGAG 1 chr19:12993627-12993707 ( 27) TGTCAGTG 1 chr16:25565141-25565221 ( 56) TGTCAGGG 1 chr21:19062505-19062585 ( 53) TGTCAGGG 1 chr5:1132018-1132098 ( 14) TGTCAGGG 1 chr7:138777023-138777103 ( 15) TGAAAGAG 1 chr17:49512274-49512354 ( 6) TGAAAGAG 1 chr3:44509734-44509814 ( 51) TGAAAGAG 1 chr5:95043435-95043515 ( 21) TGAAAGAG 1 chr3:129895918-129895998 ( 27) TGAAAGAG 1 chr2:98328874-98328954 ( 5) TGAAAGAG 1 chr3:14293112-14293192 ( 63) TGTCAGAA 1 chr6:16044718-16044798 ( 46) TGTCATAG 1 chr2:87816013-87816093 ( 25) TGTCATAG 1 chr4:38319052-38319132 ( 12) TGTCAGAA 1 chr16:15664979-15665059 ( 61) TGACAGTG 1 chr6:42284246-42284326 ( 23) TGACAGTG 1 chr12:7165611-7165691 ( 33) TGACAGTG 1 chr13:96037784-96037864 ( 36) TGACAGTG 1 chr19:49385453-49385533 ( 36) TCTCAGAG 1 chr3:10018080-10018160 ( 71) TGTTAGAG 1 chr10:89410768-89410848 ( 8) TGTTAGAG 1 chrX:16604175-16604255 ( 20) TGTGAGAG 1 chr15:90325462-90325542 ( 58) CGTCAGAG 1 chr19:56858850-56858930 ( 25) TGTAAGTG 1 chr6:33345587-33345667 ( 66) TGACAGAA 1 chr5:90587952-90588032 ( 63) TGACATAG 1 chr10:44479422-44479502 ( 71) TCACAGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.91997 E= 2.4e-040 -1255 -381 -1255 188 -1255 -281 205 -1255 -9 -1255 -1255 149 -99 180 -380 -300 191 -1255 -1255 -1255 -1255 -1255 203 -242 168 -1255 -222 -142 -241 -1255 203 -1255 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 60 E= 2.4e-040 0.000000 0.016667 0.000000 0.983333 0.000000 0.033333 0.966667 0.000000 0.250000 0.000000 0.000000 0.750000 0.133333 0.816667 0.016667 0.033333 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.950000 0.050000 0.850000 0.000000 0.050000 0.100000 0.050000 0.000000 0.950000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-4 regular expression -------------------------------------------------------------------------------- TG[TA]CAGAG -------------------------------------------------------------------------------- Time 15.14 secs. ******************************************************************************** ******************************************************************************** MOTIF TCTGGTTC MEME-5 width = 8 sites = 52 llr = 484 E-value = 2.2e-042 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :9::12:9 probability G :::a9::: matrix T a1a::8a1 bits 2.1 1.9 ** * 1.7 * *** ** 1.5 ***** ** Relative 1.3 ******** Entropy 1.1 ******** (13.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCTGGTTC consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:149362607-149362687 61 1.53e-05 atggagttgc tctggttc aaacgcctct chr6:33345587-33345667 49 1.53e-05 atggagttgc tctggttc aaatgtctct chr22:43521332-43521412 50 1.53e-05 atggagtcgc tctggttc aactgcctct chr1:65267954-65268034 73 1.53e-05 atggaggcac tctggttc chr6:158176276-158176356 45 1.53e-05 atggagttgc tctggttc gcatgcctct chr18:874423-874503 44 1.53e-05 atggagttgc tctggttc acatgcctct chr1:241860177-241860257 62 1.53e-05 atggatttgc tctggttc aaatgcctct chr15:68193168-68193248 43 1.53e-05 atggagttgc tctggttc cagtgcttct chr6:20273186-20273266 44 1.53e-05 atggagttgc tctggttc aaatgcctct chr3:37866035-37866115 47 1.53e-05 atggagttgc tctggttc aaacgcctct chr18:46488773-46488853 63 1.53e-05 atggagttgc tctggttc aaactcctct chr3:11310839-11310919 64 1.53e-05 atggagtcat tctggttc aaatgcctc chr9:110438221-110438301 40 1.53e-05 atggagtcac tctggttc aaacgcctct chr7:36257175-36257255 53 1.53e-05 atggagttgt tctggttc aaatgcctct chrX:47668987-47669067 8 1.53e-05 gagttac tctggttc gaacacctct chr12:110709626-11070970 22 1.53e-05 atggagttgc tctggttc acatgcctct chr19:35656553-35656633 40 1.53e-05 atggagttgc tctggttc aaacacccct chr7:29834750-29834830 40 1.53e-05 atggagttgc tctggttc aaacgcctct chr2:104086432-104086512 48 1.53e-05 atggagttgc tctggttc aaatgactct chr17:75084058-75084138 34 1.53e-05 atggagttgc tctggttc aaacgcctct chr1:1071243-1071323 4 1.53e-05 tgc tctggttc aaaggtctct chr21:46265386-46265466 45 1.53e-05 atggagtcac tctggttc gaacgcttct chr2:172435075-172435155 57 1.53e-05 atggagtcgc tctggttc aaacacctca chr17:47154382-47154462 48 1.53e-05 atggagtcgc tctggttc aaacaactct chr10:12307547-12307627 24 1.53e-05 atggagttgc tctggttc aaacgcctct chr2:129201336-129201416 34 1.53e-05 atggagttgc tctggttc acatgcctct chrX:2467545-2467625 71 1.53e-05 atggagttgc tctggttc aa chr12:132038158-13203823 44 1.53e-05 atgcagtcac tctggttc aaacgcctct chr7:138777023-138777103 38 2.87e-05 atggagtctg tctggctc tcttagctaa chr15:45876396-45876476 45 2.87e-05 atggagttgc tctggctc aaatgcctct chr6:10750957-10751037 9 2.87e-05 ggagtctg tctggctc tcttagctaa chr5:95043435-95043515 44 2.87e-05 atggagtctg tctggctc tcttagctaa chr3:129895918-129895998 50 2.87e-05 atggagtctg tctggctc tcttagctaa chr19:56858850-56858930 54 2.87e-05 atggtgtctg tctggctc tctcagctaa chr2:98328874-98328954 28 2.87e-05 atggagtctg tctggctc tcttagctaa chr11:3531005-3531085 14 2.87e-05 atggagtctg tctggctc tcttagctaa chr7:150052898-150052978 27 4.41e-05 ttaggaacta tctgcttc cttgaagttt chr8:37929538-37929618 64 7.93e-05 TATTAAAGTT TTTGGTTC AATCGGAAC chr17:41430097-41430177 38 7.93e-05 atggagtcgc tttggttc aaatgcctcg chr1:162465801-162465881 27 7.93e-05 atggagttgc tctggttt gaacacctct chr17:25434189-25434269 40 7.93e-05 atggagtatc tttggttc aaatgcctct chr12:114022096-11402217 15 7.93e-05 atggagtcac tctggttt aaacgcctct chr2:62031502-62031582 43 7.93e-05 atggagttgc tctggttT CAcacccctc chr5:1132018-1132098 6 9.26e-05 CTGCC CCTGGTTC tgtcaggggc chr3:138129221-138129301 20 1.08e-04 atggagttgc tgtggttc acatgcctct chr15:29965583-29965663 24 1.08e-04 atggagtcgc tgtggttc aaacacctct chr17:40466131-40466211 6 1.21e-04 GCTGT TCTGCCTC ACCTGTGGGG chr5:90587952-90588032 55 1.21e-04 tttaaacgcc tctgcctc tgacataggg chr16:17176440-17176520 26 1.87e-04 atggagtcac tctggtta gagcacctct chr7:140186617-140186697 57 1.87e-04 tagatctctc tctgtttc agtcataatt chr9:100812082-100812162 50 2.16e-04 atggagtcac tctagttc aaatgcctct chr1:56968686-56968766 4 2.16e-04 GGA CCTGGCTC ACCCTCATGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:149362607-149362687 1.5e-05 60_[+5]_12 chr6:33345587-33345667 1.5e-05 48_[+5]_24 chr22:43521332-43521412 1.5e-05 49_[+5]_23 chr1:65267954-65268034 1.5e-05 72_[+5] chr6:158176276-158176356 1.5e-05 44_[+5]_28 chr18:874423-874503 1.5e-05 43_[+5]_29 chr1:241860177-241860257 1.5e-05 61_[+5]_11 chr15:68193168-68193248 1.5e-05 42_[+5]_30 chr6:20273186-20273266 1.5e-05 43_[+5]_29 chr3:37866035-37866115 1.5e-05 46_[+5]_26 chr18:46488773-46488853 1.5e-05 62_[+5]_10 chr3:11310839-11310919 1.5e-05 63_[+5]_9 chr9:110438221-110438301 1.5e-05 39_[+5]_33 chr7:36257175-36257255 1.5e-05 52_[+5]_20 chrX:47668987-47669067 1.5e-05 7_[+5]_65 chr12:110709626-11070970 1.5e-05 21_[+5]_51 chr19:35656553-35656633 1.5e-05 39_[+5]_33 chr7:29834750-29834830 1.5e-05 39_[+5]_33 chr2:104086432-104086512 1.5e-05 47_[+5]_25 chr17:75084058-75084138 1.5e-05 33_[+5]_39 chr1:1071243-1071323 1.5e-05 3_[+5]_69 chr21:46265386-46265466 1.5e-05 44_[+5]_28 chr2:172435075-172435155 1.5e-05 56_[+5]_16 chr17:47154382-47154462 1.5e-05 47_[+5]_25 chr10:12307547-12307627 1.5e-05 23_[+5]_49 chr2:129201336-129201416 1.5e-05 33_[+5]_39 chrX:2467545-2467625 1.5e-05 70_[+5]_2 chr12:132038158-13203823 1.5e-05 43_[+5]_29 chr7:138777023-138777103 2.9e-05 37_[+5]_35 chr15:45876396-45876476 2.9e-05 44_[+5]_28 chr6:10750957-10751037 2.9e-05 8_[+5]_64 chr5:95043435-95043515 2.9e-05 43_[+5]_29 chr3:129895918-129895998 2.9e-05 49_[+5]_23 chr19:56858850-56858930 2.9e-05 53_[+5]_19 chr2:98328874-98328954 2.9e-05 27_[+5]_45 chr11:3531005-3531085 2.9e-05 13_[+5]_59 chr7:150052898-150052978 4.4e-05 26_[+5]_46 chr8:37929538-37929618 7.9e-05 63_[+5]_9 chr17:41430097-41430177 7.9e-05 37_[+5]_35 chr1:162465801-162465881 7.9e-05 26_[+5]_46 chr17:25434189-25434269 7.9e-05 39_[+5]_33 chr12:114022096-11402217 7.9e-05 14_[+5]_58 chr2:62031502-62031582 7.9e-05 42_[+5]_30 chr5:1132018-1132098 9.3e-05 5_[+5]_67 chr3:138129221-138129301 0.00011 19_[+5]_53 chr15:29965583-29965663 0.00011 23_[+5]_49 chr17:40466131-40466211 0.00012 5_[+5]_67 chr5:90587952-90588032 0.00012 54_[+5]_18 chr16:17176440-17176520 0.00019 25_[+5]_47 chr7:140186617-140186697 0.00019 56_[+5]_16 chr9:100812082-100812162 0.00022 49_[+5]_23 chr1:56968686-56968766 0.00022 3_[+5]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCTGGTTC width=8 seqs=52 chr1:149362607-149362687 ( 61) TCTGGTTC 1 chr6:33345587-33345667 ( 49) TCTGGTTC 1 chr22:43521332-43521412 ( 50) TCTGGTTC 1 chr1:65267954-65268034 ( 73) TCTGGTTC 1 chr6:158176276-158176356 ( 45) TCTGGTTC 1 chr18:874423-874503 ( 44) TCTGGTTC 1 chr1:241860177-241860257 ( 62) TCTGGTTC 1 chr15:68193168-68193248 ( 43) TCTGGTTC 1 chr6:20273186-20273266 ( 44) TCTGGTTC 1 chr3:37866035-37866115 ( 47) TCTGGTTC 1 chr18:46488773-46488853 ( 63) TCTGGTTC 1 chr3:11310839-11310919 ( 64) TCTGGTTC 1 chr9:110438221-110438301 ( 40) TCTGGTTC 1 chr7:36257175-36257255 ( 53) TCTGGTTC 1 chrX:47668987-47669067 ( 8) TCTGGTTC 1 chr12:110709626-11070970 ( 22) TCTGGTTC 1 chr19:35656553-35656633 ( 40) TCTGGTTC 1 chr7:29834750-29834830 ( 40) TCTGGTTC 1 chr2:104086432-104086512 ( 48) TCTGGTTC 1 chr17:75084058-75084138 ( 34) TCTGGTTC 1 chr1:1071243-1071323 ( 4) TCTGGTTC 1 chr21:46265386-46265466 ( 45) TCTGGTTC 1 chr2:172435075-172435155 ( 57) TCTGGTTC 1 chr17:47154382-47154462 ( 48) TCTGGTTC 1 chr10:12307547-12307627 ( 24) TCTGGTTC 1 chr2:129201336-129201416 ( 34) TCTGGTTC 1 chrX:2467545-2467625 ( 71) TCTGGTTC 1 chr12:132038158-13203823 ( 44) TCTGGTTC 1 chr7:138777023-138777103 ( 38) TCTGGCTC 1 chr15:45876396-45876476 ( 45) TCTGGCTC 1 chr6:10750957-10751037 ( 9) TCTGGCTC 1 chr5:95043435-95043515 ( 44) TCTGGCTC 1 chr3:129895918-129895998 ( 50) TCTGGCTC 1 chr19:56858850-56858930 ( 54) TCTGGCTC 1 chr2:98328874-98328954 ( 28) TCTGGCTC 1 chr11:3531005-3531085 ( 14) TCTGGCTC 1 chr7:150052898-150052978 ( 27) TCTGCTTC 1 chr8:37929538-37929618 ( 64) TTTGGTTC 1 chr17:41430097-41430177 ( 38) TTTGGTTC 1 chr1:162465801-162465881 ( 27) TCTGGTTT 1 chr17:25434189-25434269 ( 40) TTTGGTTC 1 chr12:114022096-11402217 ( 15) TCTGGTTT 1 chr2:62031502-62031582 ( 43) TCTGGTTT 1 chr5:1132018-1132098 ( 6) CCTGGTTC 1 chr3:138129221-138129301 ( 20) TGTGGTTC 1 chr15:29965583-29965663 ( 24) TGTGGTTC 1 chr17:40466131-40466211 ( 6) TCTGCCTC 1 chr5:90587952-90588032 ( 55) TCTGCCTC 1 chr16:17176440-17176520 ( 26) TCTGGTTA 1 chr7:140186617-140186697 ( 57) TCTGTTTC 1 chr9:100812082-100812162 ( 50) TCTAGTTC 1 chr1:56968686-56968766 ( 4) CCTGGCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.20587 E= 2.2e-042 -1234 -260 -1234 184 -1234 195 -260 -221 -1234 -1234 -1234 190 -378 -1234 207 -1234 -1234 -202 199 -380 -1234 -15 -1234 156 -1234 -1234 -1234 190 -378 198 -1234 -221 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 52 E= 2.2e-042 0.000000 0.038462 0.000000 0.961538 0.000000 0.903846 0.038462 0.057692 0.000000 0.000000 0.000000 1.000000 0.019231 0.000000 0.980769 0.000000 0.000000 0.057692 0.923077 0.019231 0.000000 0.211538 0.000000 0.788462 0.000000 0.000000 0.000000 1.000000 0.019231 0.923077 0.000000 0.057692 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTGGTTC MEME-5 regular expression -------------------------------------------------------------------------------- TCTGG[TC]TC -------------------------------------------------------------------------------- Time 18.38 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:137030913-137030993 8.19e-01 80 chr7:48512404-48512484 5.62e-02 20_[+2(5.01e-05)]_52 chr3:32098190-32098270 3.71e-06 40_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_6 chr2:238848554-238848634 1.44e-01 80 chr14:24409226-24409306 1.91e-01 80 chr1:8998642-8998722 6.21e-02 9_[+1(1.48e-05)]_63 chr8:39801982-39802062 2.34e-04 2_[+3(2.75e-05)]_4_[+2(1.53e-05)]_\ 58 chr16:65798804-65798884 4.65e-06 31_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_15 chr3:24538767-24538847 5.71e-01 80 chrX:113314821-113314901 1.18e-01 41_[+1(6.54e-05)]_31 chr11:76764479-76764559 1.68e-05 12_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(3.28e-05)]_34 chr1:43079512-43079592 4.13e-01 80 chr8:39794264-39794344 2.84e-01 80 chr21:15249958-15250038 1.89e-02 80 chr5:114720481-114720561 8.45e-01 80 chr3:4780443-4780523 2.63e-01 80 chr5:67924059-67924139 2.55e-06 11_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(3.28e-05)]_35 chr10:13580066-13580146 4.35e-02 1_[+2(1.53e-05)]_71 chr2:41954486-41954566 5.92e-01 80 chr17:14426261-14426341 1.88e-02 80 chr6:2926805-2926885 5.31e-03 58_[+1(1.48e-05)]_14 chr4:8244740-8244820 7.26e-06 3_[+4(1.49e-05)]_6_[+3(1.47e-05)]_4_\ [+2(1.53e-05)]_43 chr12:132038158-13203823 2.77e-02 43_[+5(1.53e-05)]_29 chr4:4325791-4325871 1.60e-02 40_[+4(2.97e-05)]_32 chr12:132109867-13210994 1.49e-04 42_[+3(2.75e-05)]_4_[+2(1.53e-05)]_\ 18 chr3:101350930-101351010 7.71e-06 8_[+3(2.75e-05)]_4_[+2(1.53e-05)]_\ 52 chr12:115642878-11564295 5.37e-03 53_[+2(1.53e-05)]_19 chr14:32490169-32490249 1.83e-01 80 chr11:3531005-3531085 3.58e-02 13_[+5(2.87e-05)]_59 chr6:20188874-20188954 2.42e-01 80 chr18:9005945-9006025 8.66e-01 80 chr12:113154129-11315420 2.68e-01 80 chr22:23781916-23781996 4.80e-04 34_[+3(1.47e-05)]_4_[+2(3.28e-05)]_\ 26 chr10:33345932-33346012 2.21e-05 11_[+4(1.49e-05)]_6_[+3(7.57e-05)]_\ 4_[+2(1.53e-05)]_35 chr3:146300161-146300241 2.65e-01 80 chrX:2467545-2467625 3.58e-04 56_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 2 chr10:44479422-44479502 8.63e-03 39_[+2(1.53e-05)]_10_[+2(3.28e-05)]_\ 15 chr13:96037784-96037864 1.10e-04 63_[+2(1.53e-05)]_9 chr2:174156182-174156262 2.72e-02 69_[+2(5.01e-05)]_3 chr2:62031502-62031582 8.03e-04 28_[+1(1.48e-05)]_6_[+5(7.93e-05)]_\ 30 chr9:107826674-107826754 9.82e-01 80 chr17:15430250-15430330 3.46e-02 63_[+1(3.16e-05)]_9 chr2:129201336-129201416 1.29e-03 19_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 39 chr4:129607243-129607323 3.22e-01 80 chr2:171218993-171219073 6.06e-02 80 chrX:44244382-44244462 9.82e-06 5_[+4(1.49e-05)]_6_[+3(4.23e-05)]_4_\ [+2(1.53e-05)]_41 chr3:43729844-43729924 2.36e-02 68_[+2(1.53e-05)]_4 chr5:168007905-168007985 1.02e-03 29_[+4(1.49e-05)]_16_[+2(1.53e-05)]_\ 19 chr20:4199271-4199351 6.61e-04 51_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 7 chr7:36315653-36315733 4.15e-04 19_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 41 chr20:36170891-36170971 6.53e-02 36_[+1(1.48e-05)]_36 chr10:12307547-12307627 1.24e-03 9_[+1(4.85e-05)]_6_[+5(1.53e-05)]_\ 49 chr2:9820340-9820420 1.58e-02 38_[+2(1.53e-05)]_34 chr18:33311091-33311171 3.46e-01 80 chr2:98328874-98328954 4.19e-05 4_[+4(9.15e-05)]_1_[+1(1.48e-05)]_6_\ [+5(2.87e-05)]_45 chr7:150019220-150019300 3.05e-01 80 chr11:63298736-63298816 1.27e-02 80 chr19:56858850-56858930 8.67e-05 39_[+1(1.48e-05)]_6_[+5(2.87e-05)]_\ 19 chr6:30841738-30841818 6.45e-01 80 chr19:35411123-35411203 4.77e-03 24_[+2(3.28e-05)]_48 chr1:161527712-161527792 1.46e-02 25_[+2(1.53e-05)]_10_[+2(3.28e-05)]_\ 29 chr6:110201012-110201092 1.58e-01 80 chr19:46706622-46706702 3.47e-01 80 chr3:129895918-129895998 4.19e-05 26_[+4(9.15e-05)]_1_[+1(1.48e-05)]_\ 6_[+5(2.87e-05)]_23 chr2:29265824-29265904 3.32e-01 80 chr17:42022589-42022669 1.38e-05 33_[+4(1.49e-05)]_6_[+3(4.23e-05)]_\ 4_[+2(1.53e-05)]_13 chr12:70484852-70484932 2.45e-01 80 chr9:102796313-102796393 2.22e-03 5_[+3(7.57e-05)]_4_[+2(9.40e-05)]_\ 55 chr4:38319052-38319132 2.34e-05 25_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 35 chr1:113360333-113360413 4.35e-02 17_[+1(3.16e-05)]_55 chr15:68212982-68213062 3.03e-06 19_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_27 chr7:30767706-30767786 8.28e-05 47_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 11 chr17:47154382-47154462 5.70e-04 33_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 25 chr8:59573576-59573656 9.72e-02 80 chr10:72421532-72421612 1.02e-01 80 chrX:2701030-2701110 1.31e-02 14_[+1(1.48e-05)]_58 chr22:21357328-21357408 3.33e-01 80 chr8:41315665-41315745 6.41e-06 11_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_35 chr9:139684097-139684177 1.24e-02 59_[+1(3.16e-05)]_13 chr17:25435112-25435192 4.15e-02 58_[+1(1.48e-05)]_14 chr19:43949712-43949792 4.31e-02 34_[+1(3.16e-05)]_38 chr12:7165611-7165691 7.76e-04 61_[+2(1.53e-05)]_11 chr11:76522467-76522547 1.40e-02 57_[+2(3.28e-05)]_15 chr1:147143994-147144074 8.40e-05 16_[+4(1.49e-05)]_18_[+2(1.53e-05)]_\ 30 chr10:89410768-89410848 4.77e-05 21_[+3(1.47e-05)]_4_[+2(5.01e-05)]_\ 39 chr14:102154568-10215464 5.84e-02 51_[+4(2.97e-05)]_21 chr10:104215006-10421508 1.09e-02 10_[+1(3.16e-05)]_62 chr17:18719940-18720020 3.46e-03 40_[+2(3.28e-05)]_32 chr5:95043435-95043515 4.19e-05 20_[+4(9.15e-05)]_1_[+1(1.48e-05)]_\ 6_[+5(2.87e-05)]_29 chr3:14314357-14314437 2.27e-02 51_[+2(3.28e-05)]_21 chr8:98337895-98337975 2.05e-01 80 chr15:68344358-68344438 1.33e-02 66_[+1(3.16e-05)]_6 chr22:29136260-29136340 3.21e-03 34_[+1(3.16e-05)]_13_[+2(6.53e-05)]_\ 17 chr19:33177937-33178017 3.52e-04 2_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 58 chr1:20846529-20846609 3.54e-02 61_[+1(1.48e-05)]_11 chr9:88798426-88798506 7.63e-07 29_[+4(1.49e-05)]_6_[+3(8.86e-05)]_\ 4_[+2(1.53e-05)]_17 chr8:144631408-144631488 2.75e-01 80 chr6:43894957-43895037 2.66e-01 80 chr5:36442504-36442584 4.38e-02 45_[+2(5.01e-05)]_27 chr2:172435075-172435155 5.33e-04 42_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 16 chr8:29474722-29474802 3.85e-06 33_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_13 chr6:42284246-42284326 3.98e-04 51_[+2(1.53e-05)]_21 chr21:46265386-46265466 1.53e-04 30_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 28 chr19:18475287-18475367 5.24e-01 80 chr5:1132018-1132098 4.74e-07 5_[+5(9.26e-05)]_[+4(7.48e-05)]_6_\ [+3(1.47e-05)]_4_[+2(1.53e-05)]_33 chr2:111449393-111449473 3.13e-02 80 chr6:145171189-145171269 3.74e-03 29_[+2(7.88e-05)]_19_[+1(3.16e-05)]_\ 16 chr1:85745548-85745628 4.99e-01 80 chr3:186728391-186728471 6.05e-05 16_[+3(2.75e-05)]_4_[+2(1.53e-05)]_\ 44 chr16:26981046-26981126 2.12e-06 18_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_28 chr11:9341176-9341256 8.83e-03 3_[+1(3.16e-05)]_69 chr1:1071243-1071323 1.60e-02 3_[+5(1.53e-05)]_69 chr7:140186617-140186697 7.24e-04 26_[+1(1.48e-05)]_46 chr17:75084058-75084138 9.27e-04 19_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 39 chr16:17684940-17685020 1.63e-05 28_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 30 chr10:28674865-28674945 7.42e-04 30_[+3(1.47e-05)]_4_[+2(3.28e-05)]_\ 30 chr2:87816013-87816093 2.35e-02 68_[+2(6.53e-05)]_4 chr21:45633797-45633877 7.37e-01 80 chr11:61407384-61407464 3.88e-04 13_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 47 chr11:18713081-18713161 2.75e-03 80 chr8:29952253-29952333 4.20e-02 1_[+1(3.16e-05)]_71 chr20:30093806-30093886 8.99e-06 24_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_22 chr3:5124170-5124250 1.64e-02 3_[+1(3.16e-05)]_69 chr22:23878288-23878368 3.57e-03 26_[+2(3.28e-05)]_46 chr8:131674443-131674523 1.92e-01 80 chr1:149362404-149362484 9.92e-01 80 chr12:114022096-11402217 1.09e-03 [+1(1.48e-05)]_6_[+5(7.93e-05)]_58 chr17:64730781-64730861 8.48e-01 80 chr7:138116271-138116351 3.77e-01 80 chr6:34688110-34688190 1.24e-02 19_[+1(3.16e-05)]_53 chr3:13931285-13931365 9.68e-01 80 chr9:99994415-99994495 1.99e-02 68_[+2(3.28e-05)]_4 chr7:150052898-150052978 8.64e-02 26_[+5(4.41e-05)]_46 chr2:104086432-104086512 8.26e-04 33_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 25 chr21:46013670-46013750 8.92e-01 80 chr15:27336933-27337013 3.97e-02 23_[+1(1.48e-05)]_49 chr3:32090137-32090217 7.00e-06 44_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(3.28e-05)]_2 chr2:74852978-74853058 1.07e-02 80 chr7:29834750-29834830 1.93e-04 25_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 33 chr19:35656553-35656633 1.90e-03 39_[+5(1.53e-05)]_33 chr20:36006970-36007050 1.82e-01 80 chr22:21447741-21447821 7.82e-01 80 chr6:16044718-16044798 3.59e-02 80 chr7:137908471-137908551 1.12e-01 33_[+1(6.54e-05)]_39 chr2:120096524-120096604 8.72e-02 3_[+1(6.54e-05)]_12_[+1(1.48e-05)]_\ 49 chr3:10018080-10018160 2.81e-02 80 chr4:57566987-57567067 8.87e-05 39_[+4(1.49e-05)]_18_[+2(1.53e-05)]_\ 7 chr1:167130632-167130712 8.76e-07 24_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_22 chr12:7073388-7073468 6.79e-01 80 chr17:25434189-25434269 1.10e-02 39_[+5(7.93e-05)]_33 chr7:73574330-73574410 8.10e-05 38_[+4(1.49e-05)]_18_[+2(1.53e-05)]_\ 8 chr6:157939918-157939998 7.54e-01 80 chr21:30164064-30164144 5.20e-02 38_[+2(1.53e-05)]_34 chr3:44509734-44509814 1.54e-01 50_[+4(9.15e-05)]_22 chrX:44343352-44343432 6.91e-01 80 chr6:110242164-110242244 3.52e-01 80 chr6:2980149-2980229 2.70e-06 3_[+4(1.49e-05)]_6_[+3(1.47e-05)]_4_\ [+2(1.53e-05)]_43 chr1:201123985-201124065 4.64e-01 80 chr12:110709626-11070970 7.90e-04 7_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 51 chr1:211396339-211396419 7.06e-03 27_[+1(3.16e-05)]_45 chrX:47668987-47669067 6.81e-03 7_[+5(1.53e-05)]_65 chr3:14293112-14293192 2.73e-03 28_[+1(1.48e-05)]_44 chr20:45828644-45828724 1.49e-04 30_[+3(2.75e-05)]_4_[+2(1.53e-05)]_\ 30 chr8:29217305-29217385 4.05e-06 2_[+4(1.49e-05)]_6_[+3(1.47e-05)]_4_\ [+2(1.53e-05)]_44 chr17:32235490-32235570 4.90e-02 80 chr10:95034253-95034333 6.89e-03 65_[+4(1.49e-05)]_7 chr6:37150653-37150733 5.40e-01 80 chr10:99387706-99387786 6.57e-01 80 chr21:19062505-19062585 1.24e-03 52_[+4(7.48e-05)]_6_[+3(7.57e-05)]_\ 6 chr17:13542281-13542361 5.15e-02 40_[+2(6.53e-05)]_32 chr7:36257175-36257255 6.93e-04 38_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 20 chr7:14040888-14040968 8.34e-02 80 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5_[+1(1.48e-05)]_67 chr20:36187878-36187958 5.43e-04 5_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 55 chr16:17176440-17176520 3.28e-03 11_[+1(1.48e-05)]_61 chr17:49512274-49512354 3.33e-03 5_[+4(9.15e-05)]_15_[+2(1.53e-05)]_\ 44 chr6:20273186-20273266 7.27e-04 29_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 29 chr1:56968686-56968766 2.06e-01 80 chr11:86648398-86648478 5.79e-06 8_[+4(1.49e-05)]_6_[+3(1.47e-05)]_4_\ [+2(1.53e-05)]_38 chr15:68193168-68193248 5.48e-04 28_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 30 chr20:49125567-49125647 7.46e-02 39_[+2(3.28e-05)]_33 chr17:41430097-41430177 4.11e-04 23_[+1(3.16e-05)]_6_[+5(7.93e-05)]_\ 35 chr1:241860177-241860257 1.34e-03 47_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 11 chr10:80938033-80938113 9.52e-01 80 chr18:874423-874503 6.81e-04 29_[+1(4.85e-05)]_6_[+5(1.53e-05)]_\ 29 chr6:158176276-158176356 6.00e-04 30_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 28 chr14:70164068-70164148 2.46e-02 58_[+1(1.48e-05)]_14 chr19:21803906-21803986 2.59e-03 61_[+1(3.16e-05)]_11 chr7:133895188-133895268 1.30e-01 39_[+4(4.66e-05)]_33 chr6:27028067-27028147 5.41e-01 80 chr5:90587952-90588032 1.27e-04 25_[+1(1.48e-05)]_47 chr12:68745917-68745997 2.54e-02 62_[+4(1.49e-05)]_10 chr6:10750957-10751037 3.58e-02 8_[+5(2.87e-05)]_64 chr1:65267954-65268034 1.76e-03 58_[+1(1.48e-05)]_6_[+5(1.53e-05)] chrX:16604175-16604255 3.40e-05 33_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 27 chr17:40466131-40466211 2.40e-02 80 chr8:37929538-37929618 5.61e-02 63_[+5(7.93e-05)]_9 chr15:45876396-45876476 1.99e-04 30_[+1(1.48e-05)]_6_[+5(2.87e-05)]_\ 28 chr1:142886384-142886464 6.39e-02 80 chr16:29794622-29794702 7.53e-02 16_[+1(3.16e-05)]_56 chr3:43728868-43728948 1.71e-01 80 chr22:39167993-39168073 7.26e-06 29_[+4(1.49e-05)]_6_[+3(1.47e-05)]_\ 4_[+2(1.53e-05)]_17 chr9:133323722-133323802 9.07e-01 80 chr5:55452792-55452872 1.42e-01 80 chr8:42124064-42124144 8.94e-04 8_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 52 chr19:49385453-49385533 1.64e-04 53_[+2(1.53e-05)]_19 chr10:86285104-86285184 7.00e-03 54_[+1(1.48e-05)]_18 chr19:12993627-12993707 1.37e-03 26_[+4(6.17e-05)]_21_[+2(1.53e-05)]_\ 17 chr22:43521332-43521412 3.61e-04 35_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 23 chr16:58467684-58467764 1.10e-02 1_[+1(3.16e-05)]_71 chr11:96063790-96063870 2.00e-02 34_[+1(1.48e-05)]_38 chr6:33345587-33345667 3.44e-05 34_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 24 chr15:90325462-90325542 1.62e-03 71_[+3(1.47e-05)]_1 chrX:30992018-30992098 3.44e-02 80 chr5:68387004-68387084 1.39e-03 12_[+1(1.48e-05)]_60 chr7:50428367-50428447 2.24e-01 80 chr20:61895485-61895565 2.51e-01 80 chr7:138777023-138777103 4.19e-05 14_[+4(9.15e-05)]_1_[+1(1.48e-05)]_\ 6_[+5(2.87e-05)]_35 chr5:149322878-149322958 5.63e-01 80 chr10:71170388-71170468 4.75e-02 32_[+2(1.53e-05)]_40 chr6:158130771-158130851 1.09e-02 4_[+3(1.47e-05)]_68 chr1:231208401-231208481 7.38e-01 80 chr16:15664979-15665059 4.87e-04 29_[+1(1.48e-05)]_43 chr3:194870124-194870204 1.49e-01 80 chr7:2996642-2996722 7.08e-01 80 chr9:100812082-100812162 4.16e-04 35_[+1(1.48e-05)]_37 chr6:10662516-10662596 1.28e-03 33_[+3(1.47e-05)]_4_[+2(1.53e-05)]_\ 27 chr6:37396486-37396566 2.78e-04 47_[+4(1.49e-05)]_16_[+2(3.28e-05)]_\ 1 chr15:75432971-75433051 1.21e-01 80 chr1:149362607-149362687 1.36e-03 46_[+1(1.48e-05)]_6_[+5(1.53e-05)]_\ 12 chr6:158174031-158174111 5.51e-01 80 chr2:205219405-205219485 6.48e-02 7_[+1(4.85e-05)]_10_[+1(4.85e-05)]_\ 47 chr1:222135882-222135962 1.29e-02 61_[+2(3.28e-05)]_11 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************