******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/NR2F2.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr10:63518399-63518479 1.0000 80 chr2:206004790-206004870 1.0000 80 chr1:61557383-61557463 1.0000 80 chr2:201036670-201036750 1.0000 80 chr3:122801325-122801405 1.0000 80 chr2:175045204-175045284 1.0000 80 chr1:68387925-68388005 1.0000 80 chr19:14618682-14618762 1.0000 80 chr6:105483307-105483387 1.0000 80 chr1:110805628-110805708 1.0000 80 chr3:15339224-15339304 1.0000 80 chr1:201636786-201636866 1.0000 80 chr1:234740744-234740824 1.0000 80 chr7:137628106-137628186 1.0000 80 chr19:727274-727354 1.0000 80 chr2:39173288-39173368 1.0000 80 chr1:153751447-153751527 1.0000 80 chr10:97832594-97832674 1.0000 80 chr7:98725858-98725938 1.0000 80 chr6:157209176-157209256 1.0000 80 chr16:9229757-9229837 1.0000 80 chr17:71285166-71285246 1.0000 80 chr1:110425063-110425143 1.0000 80 chr6:161665864-161665944 1.0000 80 chr4:73572523-73572603 1.0000 80 chr19:49713411-49713491 1.0000 80 chr16:1701734-1701814 1.0000 80 chr19:40512268-40512348 1.0000 80 chr14:76006328-76006408 1.0000 80 chr9:130843458-130843538 1.0000 80 chr15:81388189-81388269 1.0000 80 chrX:118611823-118611903 1.0000 80 chr7:158806097-158806177 1.0000 80 chr16:56390007-56390087 1.0000 80 chr8:100649742-100649822 1.0000 80 chr1:180572554-180572634 1.0000 80 chr4:48625599-48625679 1.0000 80 chr6:136628697-136628777 1.0000 80 chr17:37050670-37050750 1.0000 80 chr5:87674009-87674089 1.0000 80 chr3:24561717-24561797 1.0000 80 chr11:67367986-67368066 1.0000 80 chr4:53886102-53886182 1.0000 80 chr17:55420495-55420575 1.0000 80 chr3:130506688-130506768 1.0000 80 chr9:71123564-71123644 1.0000 80 chr11:62235386-62235466 1.0000 80 chr2:70008648-70008728 1.0000 80 chr20:5762925-5763005 1.0000 80 chr8:19179742-19179822 1.0000 80 chr1:95100686-95100766 1.0000 80 chr3:143734119-143734199 1.0000 80 chr3:143282785-143282865 1.0000 80 chr4:95220105-95220185 1.0000 80 chr1:154469564-154469644 1.0000 80 chr1:193083233-193083313 1.0000 80 chr1:95113896-95113976 1.0000 80 chr8:130595403-130595483 1.0000 80 chrX:131119675-131119755 1.0000 80 chr6:112126180-112126260 1.0000 80 chr9:131355470-131355550 1.0000 80 chr14:23184586-23184666 1.0000 80 chr1:19734397-19734477 1.0000 80 chr16:89230977-89231057 1.0000 80 chr1:218471890-218471970 1.0000 80 chr19:59069489-59069569 1.0000 80 chr9:111895169-111895249 1.0000 80 chr20:23073188-23073268 1.0000 80 chr6:70873026-70873106 1.0000 80 chr2:38779546-38779626 1.0000 80 chr11:68585108-68585188 1.0000 80 chr16:87755377-87755457 1.0000 80 chr4:6889874-6889954 1.0000 80 chr13:50985648-50985728 1.0000 80 chr10:82026403-82026483 1.0000 80 chr22:38539588-38539668 1.0000 80 chr7:99659271-99659351 1.0000 80 chr7:106962601-106962681 1.0000 80 chr5:149879197-149879277 1.0000 80 chr7:140017543-140017623 1.0000 80 chr1:52218445-52218525 1.0000 80 chr5:78054083-78054163 1.0000 80 chr1:8918300-8918380 1.0000 80 chr4:109616412-109616492 1.0000 80 chr12:133070977-13307105 1.0000 80 chr19:51294414-51294494 1.0000 80 chr14:78786721-78786801 1.0000 80 chr17:60996899-60996979 1.0000 80 chr3:126627704-126627784 1.0000 80 chr2:21451500-21451580 1.0000 80 chr1:92783523-92783603 1.0000 80 chr3:14877658-14877738 1.0000 80 chr8:2645847-2645927 1.0000 80 chr12:22201704-22201784 1.0000 80 chr16:11243040-11243120 1.0000 80 chr9:129931157-129931237 1.0000 80 chr10:100538213-10053829 1.0000 80 chr10:126635623-12663570 1.0000 80 chrX:53285183-53285263 1.0000 80 chr6:14452018-14452098 1.0000 80 chr7:129409099-129409179 1.0000 80 chr19:11512977-11513057 1.0000 80 chr1:48643089-48643169 1.0000 80 chr11:15601725-15601805 1.0000 80 chr16:11194427-11194507 1.0000 80 chr4:140187907-140187987 1.0000 80 chr12:120972998-12097307 1.0000 80 chr11:118444101-11844418 1.0000 80 chr19:10445130-10445210 1.0000 80 chr1:46189103-46189183 1.0000 80 chr6:34252800-34252880 1.0000 80 chr1:236696292-236696372 1.0000 80 chr12:108308383-10830846 1.0000 80 chr7:72987293-72987373 1.0000 80 chr7:134278862-134278942 1.0000 80 chr2:102667368-102667448 1.0000 80 chr3:52947064-52947144 1.0000 80 chr1:172411687-172411767 1.0000 80 chr1:226197426-226197506 1.0000 80 chr11:12267171-12267251 1.0000 80 chr1:95273791-95273871 1.0000 80 chr12:54688115-54688195 1.0000 80 chr11:18512815-18512895 1.0000 80 chr7:126339144-126339224 1.0000 80 chr9:139129882-139129962 1.0000 80 chr20:43598959-43599039 1.0000 80 chr7:121035013-121035093 1.0000 80 chr15:63655632-63655712 1.0000 80 chr1:159046734-159046814 1.0000 80 chr15:27465493-27465573 1.0000 80 chr11:1804325-1804405 1.0000 80 chr17:19913652-19913732 1.0000 80 chr1:180579818-180579898 1.0000 80 chr3:151444011-151444091 1.0000 80 chr9:36215951-36216031 1.0000 80 chr12:70559369-70559449 1.0000 80 chr9:110919077-110919157 1.0000 80 chr1:198568149-198568229 1.0000 80 chr3:53384823-53384903 1.0000 80 chr17:54987726-54987806 1.0000 80 chr3:49195696-49195776 1.0000 80 chr5:169514584-169514664 1.0000 80 chr10:72453528-72453608 1.0000 80 chr3:179333391-179333471 1.0000 80 chr12:122791108-12279118 1.0000 80 chr6:117916407-117916487 1.0000 80 chr12:124654243-12465432 1.0000 80 chr3:65603599-65603679 1.0000 80 chr7:30280151-30280231 1.0000 80 chr9:131059075-131059155 1.0000 80 chr8:6286317-6286397 1.0000 80 chr1:12145836-12145916 1.0000 80 chr5:125867533-125867613 1.0000 80 chr2:202298409-202298489 1.0000 80 chr8:17987746-17987826 1.0000 80 chr18:47922530-47922610 1.0000 80 chr17:48439372-48439452 1.0000 80 chr9:5850046-5850126 1.0000 80 chr10:63540250-63540330 1.0000 80 chr6:52166287-52166367 1.0000 80 chr3:143002425-143002505 1.0000 80 chr3:133174976-133175056 1.0000 80 chr17:39835567-39835647 1.0000 80 chr3:133472768-133472848 1.0000 80 chr7:112782550-112782630 1.0000 80 chr5:657867-657947 1.0000 80 chr2:27243338-27243418 1.0000 80 chr5:141087762-141087842 1.0000 80 chr22:36766198-36766278 1.0000 80 chr4:82727825-82727905 1.0000 80 chr17:26075264-26075344 1.0000 80 chr1:208335511-208335591 1.0000 80 chr11:73727501-73727581 1.0000 80 chr2:27230416-27230496 1.0000 80 chr21:45280771-45280851 1.0000 80 chr5:150505893-150505973 1.0000 80 chr19:11379810-11379890 1.0000 80 chr7:158533620-158533700 1.0000 80 chr12:22199788-22199868 1.0000 80 chr7:107727612-107727692 1.0000 80 chr7:116250338-116250418 1.0000 80 chr1:25804005-25804085 1.0000 80 chr11:65319232-65319312 1.0000 80 chr17:8323864-8323944 1.0000 80 chr19:10410321-10410401 1.0000 80 chr15:74872923-74873003 1.0000 80 chr3:47544692-47544772 1.0000 80 chr21:47875769-47875849 1.0000 80 chr10:94837859-94837939 1.0000 80 chr12:56695079-56695159 1.0000 80 chr20:34771246-34771326 1.0000 80 chr1:33475309-33475389 1.0000 80 chr16:68018920-68019000 1.0000 80 chr7:158656170-158656250 1.0000 80 chr19:49136775-49136855 1.0000 80 chr19:29037265-29037345 1.0000 80 chr5:142232493-142232573 1.0000 80 chr4:8254565-8254645 1.0000 80 chr1:28563634-28563714 1.0000 80 chr16:56323931-56324011 1.0000 80 chr6:135439423-135439503 1.0000 80 chr6:163991739-163991819 1.0000 80 chr4:48593566-48593646 1.0000 80 chr4:124365632-124365712 1.0000 80 chr18:33780471-33780551 1.0000 80 chr2:85814833-85814913 1.0000 80 chr2:179266871-179266951 1.0000 80 chr4:32003806-32003886 1.0000 80 chr11:129973425-12997350 1.0000 80 chr1:201139801-201139881 1.0000 80 chr3:67067736-67067816 1.0000 80 chr12:103023201-10302328 1.0000 80 chr1:69945605-69945685 1.0000 80 chr20:40167548-40167628 1.0000 80 chr17:36572816-36572896 1.0000 80 chr2:158755874-158755954 1.0000 80 chr3:16587968-16588048 1.0000 80 chr3:141050807-141050887 1.0000 80 chr6:15970905-15970985 1.0000 80 chr2:196460664-196460744 1.0000 80 chr17:56514434-56514514 1.0000 80 chrX:153119131-153119211 1.0000 80 chr16:193150-193230 1.0000 80 chr1:51986724-51986804 1.0000 80 chr4:96210541-96210621 1.0000 80 chr10:9865390-9865470 1.0000 80 chr17:37027852-37027932 1.0000 80 chr2:39742570-39742650 1.0000 80 chr4:185373071-185373151 1.0000 80 chr12:31910163-31910243 1.0000 80 chr16:81658611-81658691 1.0000 80 chr2:187749463-187749543 1.0000 80 chr6:106344213-106344293 1.0000 80 chr10:22678915-22678995 1.0000 80 chr5:171583785-171583865 1.0000 80 chr1:101594151-101594231 1.0000 80 chr18:52613522-52613602 1.0000 80 chr2:47306261-47306341 1.0000 80 chr22:29666551-29666631 1.0000 80 chr19:11464193-11464273 1.0000 80 chr4:14922076-14922156 1.0000 80 chr19:38687078-38687158 1.0000 80 chr8:125029980-125030060 1.0000 80 chr3:143026585-143026665 1.0000 80 chr4:25052505-25052585 1.0000 80 chr6:10750134-10750214 1.0000 80 chr3:171146196-171146276 1.0000 80 chr17:25897373-25897453 1.0000 80 chr10:33249179-33249259 1.0000 80 chr3:4867744-4867824 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_NR2F2/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/NR2F2.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.247 C 0.249 G 0.253 T 0.251 Background letter frequencies (from file dataset with add-one prior applied): A 0.247 C 0.249 G 0.253 T 0.251 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGACCTYT MEME-1 width = 8 sites = 144 llr = 1007 E-value = 8.3e-074 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :19::::2 pos.-specific C :1:aa252 probability G :81:::1: matrix T a::::745 bits 2.0 * 1.8 * ** 1.6 * ** 1.4 * ** Relative 1.2 ***** Entropy 1.0 ****** (10.1 bits) 0.8 ****** 0.6 ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACCTCT consensus CTC sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:25897373-25897453 37 1.53e-05 ttgcatgtgc tgacctct gtggttcatc chr3:143026585-143026665 13 1.53e-05 GTCTCCAGCC TGACCTCT GGGTGAGCCC chr12:31910163-31910243 52 1.53e-05 acaaatcctg tgacctct ggccacagga chr6:163991739-163991819 16 1.53e-05 TATGACCTTC TGACCTCT GAACTCTTCA chr5:150505893-150505973 66 1.53e-05 GGGGAAGGTC TGACCTCT ACTCGGG chr17:26075264-26075344 54 1.53e-05 GGATGCCCTT TGACCTCT GCTTCCTGCT chr17:54987726-54987806 17 1.53e-05 GTTTCAAACT TGACCTCT GTGACACTGC chr1:236696292-236696372 53 1.53e-05 GATGACCTCC TGACCTCT GGCTTATTTC chr19:51294414-51294494 51 1.53e-05 CTTGCCCTCT TGACCTCT AACCTTTAAC chr4:95220105-95220185 55 1.53e-05 agatgtgcag tgacctct ggcagtcttt chr15:81388189-81388269 3 1.53e-05 TC TGACCTCT CCCTTCCCCT chr9:130843458-130843538 52 1.53e-05 TTCACCCCCT TGACCTCT CTCCTGCCTG chr19:49713411-49713491 36 1.53e-05 AAGTGACCTT TGACCTCT GGCCTTTGCA chr16:9229757-9229837 5 1.53e-05 tcat tgacctct tatcaccggc chr1:153751447-153751527 62 1.53e-05 CCTGTGACAC TGACCTCT GACCTCATCT chr1:110805628-110805708 13 1.53e-05 GGTGACAGCA TGACCTCT GGTGTCTGTT chr2:175045204-175045284 10 1.53e-05 CACAGTACT TGACCTCT GACTGGGGCA chr3:122801325-122801405 25 1.53e-05 ATGTGCCGTG TGACCTCT TGGTCTGGGT chr3:4867744-4867824 18 3.06e-05 AACCCTGGTC TGACCTTT CTGCCCGCCT chr18:52613522-52613602 49 3.06e-05 aaacgtttgc tgaccttt gGGTTGGGGC chr5:171583785-171583865 57 3.06e-05 CGCAGGAAAC TGACCTTT GGACGTGAGC chr17:37027852-37027932 49 3.06e-05 GCTTCCTCAG TGACCTTT GGCCTCTGAG chr12:103023201-10302328 29 3.06e-05 TTCTTATGCT TGACCTTT GGCTTTCTCA chr4:124365632-124365712 55 3.06e-05 TGTTCGGAAG TGACCTTT TGCCCTTGAT chr19:29037265-29037345 52 3.06e-05 AGGCCACACA TGACCTTT CCCCCAGGTC chr12:124654243-12465432 11 3.06e-05 CCTTCAGTGT TGACCTTT AATGGCCGTA chr12:122791108-12279118 69 3.06e-05 TCAGAGGCCA TGACCTTT AACA chr7:121035013-121035093 39 3.06e-05 CTATCAGCAT TGACCTTT Actctcggga chr16:56390007-56390087 54 3.06e-05 CCTGGTAGCA TGACCTTT TGGCCTTTGT chr1:61557383-61557463 68 3.06e-05 ACCAGGCATT TGACCTTT TAGAT chr19:11464193-11464273 26 6.08e-05 GCTGGAAGGA TGACCTCC AGAAGGAACT chr5:142232493-142232573 51 6.08e-05 TTGAAACCTT TGACCTCC CTCATTTCTC chr17:8323864-8323944 7 6.08e-05 GGCCAC TGACCTCC ATTCTCAGCT chr17:39835567-39835647 63 6.08e-05 ggggagcttt tgacctca agcatcctgt chr1:172411687-172411767 39 6.08e-05 TTCTGCCACT TGACCTCC TTGGTGTTAG chr16:11194427-11194507 29 6.08e-05 TCCTGGGAAT TGACCTCC CGGAAGATAA chr1:92783523-92783603 58 6.08e-05 GTCTGCTTTG TGACCTCA TTTTGACCTC chr16:87755377-87755457 36 6.08e-05 CGTTATCTCC TGACCTCC AGGCGCACAA chr19:59069489-59069569 10 6.08e-05 CTCAAGACT TGACCTCC GACCCCCCCC chr1:19734397-19734477 51 6.08e-05 GCTCACCTTC TGACCTCC ATGACTCGCC chr3:130506688-130506768 56 6.08e-05 TTGCAGTACT TGACCTCC AGACTGTCAA chr4:48625599-48625679 28 6.08e-05 ggccttggtg tgacctcc gacctgacta chr2:158755874-158755954 14 9.12e-05 AACAGAGTCA TGACCTTA GACCAGATGG chr11:129973425-12997350 24 9.12e-05 GCTGATGTGT TGACCTTA GTGGTTGACC chr12:22199788-22199868 11 9.12e-05 CCTCCCGGGT TGACCTTA CGGGGAAAAG chr3:179333391-179333471 45 9.12e-05 ATTTGAGTAC TGACCTTA AAACTTTCTC chr15:27465493-27465573 5 9.12e-05 GGGC TGACCTTA ACATATGGTA chr11:12267171-12267251 45 9.12e-05 gccagctgtt tgacctta agcctcctga chr14:78786721-78786801 69 9.12e-05 GTGTGAGATC TGACCTTA TCTG chr10:63518399-63518479 64 9.12e-05 agtaattatt tgacctta ggccaatca chr15:63655632-63655712 42 1.06e-04 GTGGAGACGC TGACCCCT AAGCTGTGCA chr9:111895169-111895249 36 1.06e-04 gaaagtttgc tgacccct gGAGTAGAGA chr3:141050807-141050887 23 1.22e-04 GGAAGACGTG TGACCCTT TGGGGAAGAG chr7:107727612-107727692 38 1.22e-04 AGCTGTTTCA TGACCCTT AGCCCCCACC chr2:27243338-27243418 52 1.22e-04 cagcagcagc tgaccctt ggcctctggg chr8:6286317-6286397 24 1.22e-04 gtctctttct tgaccctt ttcaccctca chr9:110919077-110919157 53 1.22e-04 ttatgttctc tgaccctt ggtttcctct chr3:126627704-126627784 38 1.22e-04 ccagaggtct tgaccctt gcctgtggtt chr8:19179742-19179822 44 1.22e-04 GCTAAGCCCA TGACCCTT GTGGGTTGAC chr2:179266871-179266951 8 1.37e-04 AGCTCAG TGACCTGT GACTCACTTT chr7:116250338-116250418 17 1.37e-04 tactgggtca tgacctgt ggtttaaaaa chr1:95273791-95273871 23 1.37e-04 GGCTGCGGTT TGACCTGT GGGCCCCTGC chr12:56695079-56695159 48 1.67e-04 TCGTAGTCAT TGACCCCA AGGACAAGAG chr7:112782550-112782630 8 1.67e-04 agttcgt tgaccccc acctaatccc chr16:11243040-11243120 24 1.67e-04 CAGCGGGACT TGACCCCA TGGGGTCACT chr3:14877658-14877738 29 1.67e-04 TGGCAGGCCA TGACCCCA GTCCTGCTCT chr17:60996899-60996979 64 1.67e-04 CCCACAAAGG TGACCCCA CTGTAAAAG chr7:99659271-99659351 13 1.67e-04 GCTGAAGCTC TGACCCCC AGCAGATGGT chr3:143734119-143734199 43 1.67e-04 CATTGCGGTC TGACCCCC AGGGGTTGGA chr19:727274-727354 4 1.67e-04 ccc tgacccca acctgaccct chr10:22678915-22678995 14 1.97e-04 GTGTGTGCGG TGACCCTC TGGGGTGTGG chr4:185373071-185373151 51 1.97e-04 TGACCCTGTA TGACCCTA GGGTTGCACC chr3:16587968-16588048 54 1.97e-04 cctaaatgtg tgacccta gataagtcgc chr4:8254565-8254645 31 1.97e-04 GTCTGCTGCA TGACCCTA CGTCCCTGTG chr1:46189103-46189183 49 1.97e-04 GAAGGACCTC TGACCCTA GGTTAAACAG chr7:129409099-129409179 46 1.97e-04 GAACCACACA TGACCCTC CGAGGGCAGG chr5:149879197-149879277 42 1.97e-04 GCCTGCTCTG TGACCCTC GAATCCTCCC chrX:153119131-153119211 1 2.28e-04 . tcacctct taagtctgct chr1:69945605-69945685 68 2.28e-04 tttggcctct tggcctct tgacc chr16:68018920-68019000 27 2.28e-04 AGAAGGGCCT TGGCCTCT GGCGACCACT chr20:23073188-23073268 19 2.28e-04 TAACTTGTGC TCACCTCT TGACACTGGC chr10:97832594-97832674 44 2.28e-04 GATAACCTTT TCACCTCT GTCCTCCTGT chr1:201636786-201636866 50 2.28e-04 AGTAACAAAC TCACCTCT CCCTCCCTGT chr3:133472768-133472848 47 2.73e-04 GTGTGCAGCT TGACCTGA AGGCTACTGC chr7:72987293-72987373 43 2.73e-04 TCACGGGCAG TGACCTGA CCAACTGTCA chr4:140187907-140187987 31 2.73e-04 GCAGCATTTG TAACCTCT GGGGTTGTTT chr1:95113896-95113976 59 2.73e-04 GCAAGCCTCC TGACCTGA GCAGGCTGAG chr3:143282785-143282865 30 2.73e-04 gctaggttcc tgacctgc tgtcttatcg chr17:37050670-37050750 49 2.73e-04 gcaagttgct taacctct gtgcacagtg chr1:180572554-180572634 51 2.73e-04 TCCTGGCCTG TGACCTGC CTAGAGCAGT chr8:100649742-100649822 36 2.73e-04 gtaacctttg tgacctga gctgatagct chr10:33249179-33249259 35 3.19e-04 CAGATAGCTC TCACCTTT CCATGTCTAA chr6:15970905-15970985 59 3.19e-04 TCAATCACTT TGACCTAT TGACTCTGCA chr1:28563634-28563714 55 3.19e-04 GCTTGTCCTT TGGCCTTT CACTTCTGCC chr2:21451500-21451580 20 3.19e-04 CAGTGGCCTT TGGCCTTT GGTGACTCTT chr6:136628697-136628777 32 3.19e-04 gtttactatc tggccttt tgcagaaaga chr6:105483307-105483387 12 3.19e-04 CTGTCTATTC TGACCTAT AACCCCTATT chr2:201036670-201036750 6 3.19e-04 ctgta tcaccttt tatgacccag chr22:38539588-38539668 28 3.34e-04 gcaattcact taaccttt ctgggcgtca chr1:193083233-193083313 55 3.34e-04 TGGTGACCAT TAACCTTT GGCCAATTTA chr16:56323931-56324011 73 4.10e-04 cacgacctcc tggcctca chr3:47544692-47544772 23 4.10e-04 TCAGGAAACA TGGCCTCA CACCCACTGC chr10:63540250-63540330 13 4.10e-04 CAGTGATGTT TGGCCTCC ACTAGATAAA chr12:133070977-13307105 17 4.10e-04 CATCCTTATC TGGCCTCA GGCCACAGAA chr11:67367986-67368066 18 4.10e-04 ATACTGGCCA TGGCCTCA TGACCGGCTG chr19:10410321-10410401 30 4.55e-04 CACCCAGCAC TGCCCTCT GATCCGGGTC chr7:126339144-126339224 54 4.55e-04 GCTAATCACT TAACCTCC CAGTGAATTA chr14:23184586-23184666 6 4.55e-04 gctca taacctcc aggagggtag chr6:112126180-112126260 22 4.55e-04 ACCCAGGGGT TAACCTCC AGGAGTCCTT chr6:52166287-52166367 73 5.61e-04 Actgccctcc tgacctaa chr5:78054083-78054163 8 5.61e-04 GGCAGTT TCACCTTC ACCTTGGGGT chr5:87674009-87674089 4 5.61e-04 agt tcaccttc tcagagagac chr1:52218445-52218525 68 6.52e-04 tgatcccatt taacctta gttac chr7:137628106-137628186 40 6.52e-04 GGGTGATCTC TGCCCTTT CAACAGCTGG chr1:234740744-234740824 12 6.52e-04 AACCACAGGT TGCCCTTT CCACAGCTGG chr3:15339224-15339304 25 6.52e-04 cgtggcctag tcacccct gctaccctag chr1:68387925-68388005 38 6.52e-04 atgtgggaga tgcccttt catgacttgg chr10:72453528-72453608 18 7.13e-04 GCAGAGGTCA TGACCTTG GGAACTGTGG chr15:74872923-74873003 29 8.19e-04 gcaaaggtta tcacctgt aaccctgaag chr11:15601725-15601805 48 8.19e-04 ctcaattagt tggcctgt gtgaacctga chrX:131119675-131119755 11 8.19e-04 ATCTGGTGGC TGGCCTGT GTGAGCCTGA chr6:135439423-135439503 15 8.65e-04 ATCTGTGCCT TGCCCTCC ACCCTCTGCT chr20:40167548-40167628 25 9.85e-04 tgcctcctgg tgaccacc cacctatggg chr7:30280151-30280231 51 9.85e-04 TAATTGGCTG TGACCACA AAGGTCAACC chr4:6889874-6889954 38 9.85e-04 CCTTGAGTGC TGACCACA GTGCTGTCAC chr3:171146196-171146276 51 1.03e-03 CACTGCTTCC TGCCCCCT GTGGTCAACC chr12:108308383-10830846 55 1.03e-03 ctcaaaggat taaccccc tggcccaggt chr6:106344213-106344293 6 1.20e-03 GTCTG TGACCATC TGTCTGAAAG chr3:67067736-67067816 20 1.20e-03 TTCCCACCCC TGACCCAA AACATCTGGT chr18:33780471-33780551 9 1.20e-03 GTGTTCAG TGAACTCT ACCCCCATTT chr17:48439372-48439452 64 1.20e-03 ACCTCTAAAG TCACCCTA TCAGCCAGC chr5:169514584-169514664 36 1.20e-03 taagtgtctc tgacccac aggtcacact chr1:159046734-159046814 45 1.20e-03 TGACCGCAGA TGACTTCT TGATACACTT chrX:53285183-53285263 49 1.20e-03 GCCTGGGGCA TCACCCTC CACACTGTGG chr2:70008648-70008728 25 1.20e-03 CTTGGGTGGC TGAACTCT GATCTTGACC chr17:55420495-55420575 54 1.20e-03 taagccctct tgacccac tttgcagatg chr8:2645847-2645927 1 1.26e-03 . taaccctc actgctgcag chr4:96210541-96210621 52 1.38e-03 GACCTAGGCC TGACCCTG CATTAAGCAA chr21:47875769-47875849 28 1.38e-03 ttccaacctc tagcctct gaactgctcc chr4:82727825-82727905 44 1.38e-03 caaggGTCAT TGGCCTGC ACAGGTATCA chr2:202298409-202298489 17 1.38e-03 TATTAGAGCT TCACCTGC AGATAAGAAA chr20:43598959-43599039 33 1.38e-03 GTTGAAATAG TGACTTTT GCATTTTGTA chr5:657867-657947 30 1.52e-03 TCCCTGCCAG TGACCTGG GCAGCTGCAT chr9:129931157-129931237 72 1.76e-03 GCGTGCAGTG TGATCTTT G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:25897373-25897453 1.5e-05 36_[+1]_36 chr3:143026585-143026665 1.5e-05 12_[+1]_60 chr12:31910163-31910243 1.5e-05 51_[+1]_21 chr6:163991739-163991819 1.5e-05 15_[+1]_57 chr5:150505893-150505973 1.5e-05 65_[+1]_7 chr17:26075264-26075344 1.5e-05 53_[+1]_19 chr17:54987726-54987806 1.5e-05 16_[+1]_56 chr1:236696292-236696372 1.5e-05 52_[+1]_20 chr19:51294414-51294494 1.5e-05 50_[+1]_22 chr4:95220105-95220185 1.5e-05 54_[+1]_18 chr15:81388189-81388269 1.5e-05 2_[+1]_70 chr9:130843458-130843538 1.5e-05 51_[+1]_21 chr19:49713411-49713491 1.5e-05 35_[+1]_37 chr16:9229757-9229837 1.5e-05 4_[+1]_68 chr1:153751447-153751527 1.5e-05 61_[+1]_11 chr1:110805628-110805708 1.5e-05 12_[+1]_60 chr2:175045204-175045284 1.5e-05 9_[+1]_63 chr3:122801325-122801405 1.5e-05 24_[+1]_48 chr3:4867744-4867824 3.1e-05 17_[+1]_55 chr18:52613522-52613602 3.1e-05 48_[+1]_24 chr5:171583785-171583865 3.1e-05 56_[+1]_16 chr17:37027852-37027932 3.1e-05 48_[+1]_24 chr12:103023201-10302328 3.1e-05 28_[+1]_44 chr4:124365632-124365712 3.1e-05 54_[+1]_18 chr19:29037265-29037345 3.1e-05 51_[+1]_21 chr12:124654243-12465432 3.1e-05 10_[+1]_62 chr12:122791108-12279118 3.1e-05 68_[+1]_4 chr7:121035013-121035093 3.1e-05 38_[+1]_34 chr16:56390007-56390087 3.1e-05 53_[+1]_19 chr1:61557383-61557463 3.1e-05 67_[+1]_5 chr19:11464193-11464273 6.1e-05 25_[+1]_47 chr5:142232493-142232573 6.1e-05 50_[+1]_22 chr17:8323864-8323944 6.1e-05 6_[+1]_66 chr17:39835567-39835647 6.1e-05 62_[+1]_10 chr1:172411687-172411767 6.1e-05 38_[+1]_34 chr16:11194427-11194507 6.1e-05 28_[+1]_44 chr1:92783523-92783603 6.1e-05 57_[+1]_15 chr16:87755377-87755457 6.1e-05 35_[+1]_37 chr19:59069489-59069569 6.1e-05 9_[+1]_63 chr1:19734397-19734477 6.1e-05 50_[+1]_22 chr3:130506688-130506768 6.1e-05 55_[+1]_17 chr4:48625599-48625679 6.1e-05 27_[+1]_45 chr2:158755874-158755954 9.1e-05 13_[+1]_59 chr11:129973425-12997350 9.1e-05 23_[+1]_49 chr12:22199788-22199868 9.1e-05 10_[+1]_62 chr3:179333391-179333471 9.1e-05 44_[+1]_28 chr15:27465493-27465573 9.1e-05 4_[+1]_68 chr11:12267171-12267251 9.1e-05 44_[+1]_28 chr14:78786721-78786801 9.1e-05 68_[+1]_4 chr10:63518399-63518479 9.1e-05 63_[+1]_9 chr15:63655632-63655712 0.00011 41_[+1]_31 chr9:111895169-111895249 0.00011 35_[+1]_37 chr3:141050807-141050887 0.00012 22_[+1]_50 chr7:107727612-107727692 0.00012 37_[+1]_35 chr2:27243338-27243418 0.00012 51_[+1]_21 chr8:6286317-6286397 0.00012 23_[+1]_49 chr9:110919077-110919157 0.00012 52_[+1]_20 chr3:126627704-126627784 0.00012 37_[+1]_35 chr8:19179742-19179822 0.00012 43_[+1]_29 chr2:179266871-179266951 0.00014 7_[+1]_65 chr7:116250338-116250418 0.00014 16_[+1]_56 chr1:95273791-95273871 0.00014 22_[+1]_50 chr12:56695079-56695159 0.00017 47_[+1]_25 chr7:112782550-112782630 0.00017 7_[+1]_65 chr16:11243040-11243120 0.00017 23_[+1]_49 chr3:14877658-14877738 0.00017 28_[+1]_44 chr17:60996899-60996979 0.00017 63_[+1]_9 chr7:99659271-99659351 0.00017 12_[+1]_60 chr3:143734119-143734199 0.00017 42_[+1]_30 chr19:727274-727354 0.00017 3_[+1]_69 chr10:22678915-22678995 0.0002 13_[+1]_59 chr4:185373071-185373151 0.0002 50_[+1]_22 chr3:16587968-16588048 0.0002 53_[+1]_19 chr4:8254565-8254645 0.0002 30_[+1]_42 chr1:46189103-46189183 0.0002 48_[+1]_24 chr7:129409099-129409179 0.0002 45_[+1]_27 chr5:149879197-149879277 0.0002 41_[+1]_31 chrX:153119131-153119211 0.00023 [+1]_72 chr1:69945605-69945685 0.00023 67_[+1]_5 chr16:68018920-68019000 0.00023 26_[+1]_46 chr20:23073188-23073268 0.00023 18_[+1]_54 chr10:97832594-97832674 0.00023 43_[+1]_29 chr1:201636786-201636866 0.00023 49_[+1]_23 chr3:133472768-133472848 0.00027 46_[+1]_26 chr7:72987293-72987373 0.00027 42_[+1]_30 chr4:140187907-140187987 0.00027 30_[+1]_42 chr1:95113896-95113976 0.00027 58_[+1]_14 chr3:143282785-143282865 0.00027 29_[+1]_43 chr17:37050670-37050750 0.00027 48_[+1]_24 chr1:180572554-180572634 0.00027 50_[+1]_22 chr8:100649742-100649822 0.00027 35_[+1]_37 chr10:33249179-33249259 0.00032 34_[+1]_38 chr6:15970905-15970985 0.00032 58_[+1]_14 chr1:28563634-28563714 0.00032 54_[+1]_18 chr2:21451500-21451580 0.00032 19_[+1]_53 chr6:136628697-136628777 0.00032 31_[+1]_41 chr6:105483307-105483387 0.00032 11_[+1]_61 chr2:201036670-201036750 0.00032 5_[+1]_67 chr22:38539588-38539668 0.00033 27_[+1]_45 chr1:193083233-193083313 0.00033 54_[+1]_18 chr16:56323931-56324011 0.00041 72_[+1] chr3:47544692-47544772 0.00041 22_[+1]_50 chr10:63540250-63540330 0.00041 12_[+1]_60 chr12:133070977-13307105 0.00041 16_[+1]_56 chr11:67367986-67368066 0.00041 17_[+1]_55 chr19:10410321-10410401 0.00046 29_[+1]_43 chr7:126339144-126339224 0.00046 53_[+1]_19 chr14:23184586-23184666 0.00046 5_[+1]_67 chr6:112126180-112126260 0.00046 21_[+1]_51 chr6:52166287-52166367 0.00056 72_[+1] chr5:78054083-78054163 0.00056 7_[+1]_65 chr5:87674009-87674089 0.00056 3_[+1]_69 chr1:52218445-52218525 0.00065 67_[+1]_5 chr7:137628106-137628186 0.00065 39_[+1]_33 chr1:234740744-234740824 0.00065 11_[+1]_61 chr3:15339224-15339304 0.00065 24_[+1]_48 chr1:68387925-68388005 0.00065 37_[+1]_35 chr10:72453528-72453608 0.00071 17_[+1]_55 chr15:74872923-74873003 0.00082 28_[+1]_44 chr11:15601725-15601805 0.00082 47_[+1]_25 chrX:131119675-131119755 0.00082 10_[+1]_62 chr6:135439423-135439503 0.00086 14_[+1]_58 chr20:40167548-40167628 0.00099 24_[+1]_48 chr7:30280151-30280231 0.00099 50_[+1]_22 chr4:6889874-6889954 0.00099 37_[+1]_35 chr3:171146196-171146276 0.001 50_[+1]_22 chr12:108308383-10830846 0.001 54_[+1]_18 chr6:106344213-106344293 0.0012 5_[+1]_67 chr3:67067736-67067816 0.0012 19_[+1]_53 chr18:33780471-33780551 0.0012 8_[+1]_64 chr17:48439372-48439452 0.0012 63_[+1]_9 chr5:169514584-169514664 0.0012 35_[+1]_37 chr1:159046734-159046814 0.0012 44_[+1]_28 chrX:53285183-53285263 0.0012 48_[+1]_24 chr2:70008648-70008728 0.0012 24_[+1]_48 chr17:55420495-55420575 0.0012 53_[+1]_19 chr8:2645847-2645927 0.0013 [+1]_72 chr4:96210541-96210621 0.0014 51_[+1]_21 chr21:47875769-47875849 0.0014 27_[+1]_45 chr4:82727825-82727905 0.0014 43_[+1]_29 chr2:202298409-202298489 0.0014 16_[+1]_56 chr20:43598959-43599039 0.0014 32_[+1]_40 chr5:657867-657947 0.0015 29_[+1]_43 chr9:129931157-129931237 0.0018 71_[+1]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACCTYT width=8 seqs=144 chr17:25897373-25897453 ( 37) TGACCTCT 1 chr3:143026585-143026665 ( 13) TGACCTCT 1 chr12:31910163-31910243 ( 52) TGACCTCT 1 chr6:163991739-163991819 ( 16) TGACCTCT 1 chr5:150505893-150505973 ( 66) TGACCTCT 1 chr17:26075264-26075344 ( 54) TGACCTCT 1 chr17:54987726-54987806 ( 17) TGACCTCT 1 chr1:236696292-236696372 ( 53) TGACCTCT 1 chr19:51294414-51294494 ( 51) TGACCTCT 1 chr4:95220105-95220185 ( 55) TGACCTCT 1 chr15:81388189-81388269 ( 3) TGACCTCT 1 chr9:130843458-130843538 ( 52) TGACCTCT 1 chr19:49713411-49713491 ( 36) TGACCTCT 1 chr16:9229757-9229837 ( 5) TGACCTCT 1 chr1:153751447-153751527 ( 62) TGACCTCT 1 chr1:110805628-110805708 ( 13) TGACCTCT 1 chr2:175045204-175045284 ( 10) TGACCTCT 1 chr3:122801325-122801405 ( 25) TGACCTCT 1 chr3:4867744-4867824 ( 18) TGACCTTT 1 chr18:52613522-52613602 ( 49) TGACCTTT 1 chr5:171583785-171583865 ( 57) TGACCTTT 1 chr17:37027852-37027932 ( 49) TGACCTTT 1 chr12:103023201-10302328 ( 29) TGACCTTT 1 chr4:124365632-124365712 ( 55) TGACCTTT 1 chr19:29037265-29037345 ( 52) TGACCTTT 1 chr12:124654243-12465432 ( 11) TGACCTTT 1 chr12:122791108-12279118 ( 69) TGACCTTT 1 chr7:121035013-121035093 ( 39) TGACCTTT 1 chr16:56390007-56390087 ( 54) TGACCTTT 1 chr1:61557383-61557463 ( 68) TGACCTTT 1 chr19:11464193-11464273 ( 26) TGACCTCC 1 chr5:142232493-142232573 ( 51) TGACCTCC 1 chr17:8323864-8323944 ( 7) TGACCTCC 1 chr17:39835567-39835647 ( 63) TGACCTCA 1 chr1:172411687-172411767 ( 39) TGACCTCC 1 chr16:11194427-11194507 ( 29) TGACCTCC 1 chr1:92783523-92783603 ( 58) TGACCTCA 1 chr16:87755377-87755457 ( 36) TGACCTCC 1 chr19:59069489-59069569 ( 10) TGACCTCC 1 chr1:19734397-19734477 ( 51) TGACCTCC 1 chr3:130506688-130506768 ( 56) TGACCTCC 1 chr4:48625599-48625679 ( 28) TGACCTCC 1 chr2:158755874-158755954 ( 14) TGACCTTA 1 chr11:129973425-12997350 ( 24) TGACCTTA 1 chr12:22199788-22199868 ( 11) TGACCTTA 1 chr3:179333391-179333471 ( 45) TGACCTTA 1 chr15:27465493-27465573 ( 5) TGACCTTA 1 chr11:12267171-12267251 ( 45) TGACCTTA 1 chr14:78786721-78786801 ( 69) TGACCTTA 1 chr10:63518399-63518479 ( 64) TGACCTTA 1 chr15:63655632-63655712 ( 42) TGACCCCT 1 chr9:111895169-111895249 ( 36) TGACCCCT 1 chr3:141050807-141050887 ( 23) TGACCCTT 1 chr7:107727612-107727692 ( 38) TGACCCTT 1 chr2:27243338-27243418 ( 52) TGACCCTT 1 chr8:6286317-6286397 ( 24) TGACCCTT 1 chr9:110919077-110919157 ( 53) TGACCCTT 1 chr3:126627704-126627784 ( 38) TGACCCTT 1 chr8:19179742-19179822 ( 44) TGACCCTT 1 chr2:179266871-179266951 ( 8) TGACCTGT 1 chr7:116250338-116250418 ( 17) TGACCTGT 1 chr1:95273791-95273871 ( 23) TGACCTGT 1 chr12:56695079-56695159 ( 48) TGACCCCA 1 chr7:112782550-112782630 ( 8) TGACCCCC 1 chr16:11243040-11243120 ( 24) TGACCCCA 1 chr3:14877658-14877738 ( 29) TGACCCCA 1 chr17:60996899-60996979 ( 64) TGACCCCA 1 chr7:99659271-99659351 ( 13) TGACCCCC 1 chr3:143734119-143734199 ( 43) TGACCCCC 1 chr19:727274-727354 ( 4) TGACCCCA 1 chr10:22678915-22678995 ( 14) TGACCCTC 1 chr4:185373071-185373151 ( 51) TGACCCTA 1 chr3:16587968-16588048 ( 54) TGACCCTA 1 chr4:8254565-8254645 ( 31) TGACCCTA 1 chr1:46189103-46189183 ( 49) TGACCCTA 1 chr7:129409099-129409179 ( 46) TGACCCTC 1 chr5:149879197-149879277 ( 42) TGACCCTC 1 chrX:153119131-153119211 ( 1) TCACCTCT 1 chr1:69945605-69945685 ( 68) TGGCCTCT 1 chr16:68018920-68019000 ( 27) TGGCCTCT 1 chr20:23073188-23073268 ( 19) TCACCTCT 1 chr10:97832594-97832674 ( 44) TCACCTCT 1 chr1:201636786-201636866 ( 50) TCACCTCT 1 chr3:133472768-133472848 ( 47) TGACCTGA 1 chr7:72987293-72987373 ( 43) TGACCTGA 1 chr4:140187907-140187987 ( 31) TAACCTCT 1 chr1:95113896-95113976 ( 59) TGACCTGA 1 chr3:143282785-143282865 ( 30) TGACCTGC 1 chr17:37050670-37050750 ( 49) TAACCTCT 1 chr1:180572554-180572634 ( 51) TGACCTGC 1 chr8:100649742-100649822 ( 36) TGACCTGA 1 chr10:33249179-33249259 ( 35) TCACCTTT 1 chr6:15970905-15970985 ( 59) TGACCTAT 1 chr1:28563634-28563714 ( 55) TGGCCTTT 1 chr2:21451500-21451580 ( 20) TGGCCTTT 1 chr6:136628697-136628777 ( 32) TGGCCTTT 1 chr6:105483307-105483387 ( 12) TGACCTAT 1 chr2:201036670-201036750 ( 6) TCACCTTT 1 chr22:38539588-38539668 ( 28) TAACCTTT 1 chr1:193083233-193083313 ( 55) TAACCTTT 1 chr16:56323931-56324011 ( 73) TGGCCTCA 1 chr3:47544692-47544772 ( 23) TGGCCTCA 1 chr10:63540250-63540330 ( 13) TGGCCTCC 1 chr12:133070977-13307105 ( 17) TGGCCTCA 1 chr11:67367986-67368066 ( 18) TGGCCTCA 1 chr19:10410321-10410401 ( 30) TGCCCTCT 1 chr7:126339144-126339224 ( 54) TAACCTCC 1 chr14:23184586-23184666 ( 6) TAACCTCC 1 chr6:112126180-112126260 ( 22) TAACCTCC 1 chr6:52166287-52166367 ( 73) TGACCTAA 1 chr5:78054083-78054163 ( 8) TCACCTTC 1 chr5:87674009-87674089 ( 4) TCACCTTC 1 chr1:52218445-52218525 ( 68) TAACCTTA 1 chr7:137628106-137628186 ( 40) TGCCCTTT 1 chr1:234740744-234740824 ( 12) TGCCCTTT 1 chr3:15339224-15339304 ( 25) TCACCCCT 1 chr1:68387925-68388005 ( 38) TGCCCTTT 1 chr10:72453528-72453608 ( 18) TGACCTTG 1 chr15:74872923-74873003 ( 29) TCACCTGT 1 chr11:15601725-15601805 ( 48) TGGCCTGT 1 chrX:131119675-131119755 ( 11) TGGCCTGT 1 chr6:135439423-135439503 ( 15) TGCCCTCC 1 chr20:40167548-40167628 ( 25) TGACCACC 1 chr7:30280151-30280231 ( 51) TGACCACA 1 chr4:6889874-6889954 ( 38) TGACCACA 1 chr3:171146196-171146276 ( 51) TGCCCCCT 1 chr12:108308383-10830846 ( 55) TAACCCCC 1 chr6:106344213-106344293 ( 6) TGACCATC 1 chr3:67067736-67067816 ( 20) TGACCCAA 1 chr18:33780471-33780551 ( 9) TGAACTCT 1 chr17:48439372-48439452 ( 64) TCACCCTA 1 chr5:169514584-169514664 ( 36) TGACCCAC 1 chr1:159046734-159046814 ( 45) TGACTTCT 1 chrX:53285183-53285263 ( 49) TCACCCTC 1 chr2:70008648-70008728 ( 25) TGAACTCT 1 chr17:55420495-55420575 ( 54) TGACCCAC 1 chr8:2645847-2645927 ( 1) TAACCCTC 1 chr4:96210541-96210621 ( 52) TGACCCTG 1 chr21:47875769-47875849 ( 28) TAGCCTCT 1 chr4:82727825-82727905 ( 44) TGGCCTGC 1 chr2:202298409-202298489 ( 17) TCACCTGC 1 chr20:43598959-43599039 ( 33) TGACTTTT 1 chr5:657867-657947 ( 30) TGACCTGG 1 chr9:129931157-129931237 ( 72) TGATCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.82734 E= 8.3e-074 -1381 -1381 -1381 200 -169 -147 172 -1381 180 -258 -138 -1381 -415 197 -1381 -517 -1381 198 -1381 -417 -315 -8 -1381 155 -257 92 -128 61 -11 -8 -360 104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 144 E= 8.3e-074 0.000000 0.000000 0.000000 1.000000 0.076389 0.090278 0.833333 0.000000 0.861111 0.041667 0.097222 0.000000 0.013889 0.979167 0.000000 0.006944 0.000000 0.986111 0.000000 0.013889 0.027778 0.236111 0.000000 0.736111 0.041667 0.472222 0.104167 0.381944 0.229167 0.236111 0.020833 0.513889 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-1 regular expression -------------------------------------------------------------------------------- TGACC[TC][CT][TCA] -------------------------------------------------------------------------------- Time 4.95 secs. ******************************************************************************** ******************************************************************************** MOTIF ARAGGTCA MEME-2 width = 8 sites = 118 llr = 872 E-value = 4.2e-064 ******************************************************************************** -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 567::::a pos.-specific C 21:::19: probability G 143aa1:: matrix T 2::::81: bits 2.0 * * 1.8 ** * 1.6 ** ** 1.4 ** ** Relative 1.2 ****** Entropy 1.0 ****** (10.7 bits) 0.8 ****** 0.6 ******* 0.4 ******* 0.2 ******** 0.0 -------- Multilevel AAAGGTCA consensus TGG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:125029980-125030060 71 1.49e-05 GTTGAGGTTT AAAGGTCA TA chr2:47306261-47306341 16 1.49e-05 taccaagaac aaaggtca tccctgtatc chr2:39742570-39742650 50 1.49e-05 TGCAATTTGA AAAGGTCA ATTTGATTGA chr4:32003806-32003886 56 1.49e-05 AAGTCTCCCC AAAGGTCA GATCTGATCA chr2:85814833-85814913 44 1.49e-05 tggaggtcag aaaggtca tatcctcagt chr19:49136775-49136855 73 1.49e-05 GGTCGGGTTC AAAGGTCA chr20:34771246-34771326 7 1.49e-05 TCGACC AAAGGTCA AGGTGCTGAC chr2:27230416-27230496 48 1.49e-05 gaacacagca aaaggtca tccacatgtc chr9:5850046-5850126 19 1.49e-05 aataggccca aaaggtca cacagcctgc chr3:49195696-49195776 55 1.49e-05 GACAAAGGGC AAAGGTCA GGGTCATGAA chr2:102667368-102667448 38 1.49e-05 CACAGATGTC AAAGGTCA CTCATACATC chr19:10445130-10445210 51 1.49e-05 TGGAGGGATT AAAGGTCA GGGTGACCGA chr13:50985648-50985728 41 1.49e-05 GGTTATCAGG AAAGGTCA AAGACTGCAT chr20:5762925-5763005 21 1.49e-05 GCAAGATCAC AAAGGTCA CCCGAAGGCC chr4:53886102-53886182 50 1.49e-05 TTCCAAACAC AAAGGTCA ACGCTGGGCT chrX:118611823-118611903 32 1.49e-05 GAAAGAGACC AAAGGTCA AAGATAAATC chr14:76006328-76006408 29 1.49e-05 GTGGGAGCCA AAAGGTCA CCCTGCCAAT chr22:29666551-29666631 32 3.01e-05 CTCACTGATA AGAGGTCA TTGGTTGTTC chr2:187749463-187749543 37 3.01e-05 TCTACTTGAC AGAGGTCA AAGGGCATTG chr17:56514434-56514514 7 3.01e-05 ggagga agaggtca aagaaagtgg chr17:36572816-36572896 51 3.01e-05 tgcagggcag agaggtca gaacacttgc chr7:158656170-158656250 30 3.01e-05 TGCTGAGTCA AGAGGTCA TAAAGCAGGC chr5:150505893-150505973 38 3.01e-05 GCTGTGGTCA AGAGGTCA AGCAGGAGGA chr8:17987746-17987826 38 3.01e-05 caggaaccgc agaggtca gaaaggagtg chr10:72453528-72453608 10 3.01e-05 GGGGCCTGC AGAGGTCA TGACCTTGGG chr1:180579818-180579898 34 3.01e-05 AACGTCTGGC AGAGGTCA CAAACAACAC chrX:131119675-131119755 49 3.01e-05 GAGAGACCCG AGAGGTCA CCACCAGTCT chr9:71123564-71123644 36 3.01e-05 ACACAAGTCC AGAGGTCA CTGGTCATCA chr19:40512268-40512348 53 3.01e-05 CCTCAGAGGC AGAGGTCA GATCCCATGC chr16:1701734-1701814 10 3.01e-05 AGGTCACAC AGAGGTCA TAGAGAGGTG chr10:33249179-33249259 15 6.03e-05 TTCCCATGTG TAAGGTCA ACCAGATAGC chr22:36766198-36766278 29 6.03e-05 atgactcact caaggtca aagggcctgc chr5:141087762-141087842 30 6.03e-05 GGTGCGGTCC CAAGGTCA TCCTGCATCT chr9:36215951-36216031 51 6.03e-05 AAGATAAGGA CAAGGTCA CTAAGGCCAC chr12:120972998-12097307 36 6.03e-05 tgagaaaggg taaggtca cccagctagt chr11:15601725-15601805 22 6.03e-05 AACAAaggtc taaggtca agttctggct chr10:82026403-82026483 70 6.03e-05 CCTCTGACCG CAAGGTCA AAC chr6:105483307-105483387 34 6.03e-05 CCTATTCTTA CAAGGTCA ACATCTGAGG chr1:61557383-61557463 39 6.03e-05 TTTAAGTTGT TAAGGTCA TAACCTTAGC chr4:82727825-82727905 35 7.55e-05 agacctaatc aaggGTCA TTGGCCTGCA chr12:54688115-54688195 21 7.55e-05 TCTAGGGTCA AAGGGTCA AGTTCAGATC chr8:130595403-130595483 36 7.55e-05 CAAACACAGA AAGGGTCA TCCGATATCA chr19:14618682-14618762 24 7.55e-05 CAAACACTCA AAGGGTCA GTTCCGGGGC chr7:106962601-106962681 61 1.06e-04 tcagaggtga tgaggtca gggggagaaa chr16:87755377-87755457 61 1.06e-04 CAATGACAAC TGAGGTCA AAACGCAGGC chr1:33475309-33475389 49 1.22e-04 CATAGGAGCT GAAGGTCA AGAGGTTGCA chr6:161665864-161665944 17 1.22e-04 CCTAATCAGT GAAGGTCA CCAACCACAG chr11:65319232-65319312 60 1.37e-04 TATCTGGGTC AGGGGTCA GAGGGTCAGG chr3:53384823-53384903 36 1.37e-04 gcatctggtc aggggtca agaagctctg chr19:11379810-11379890 29 1.52e-04 CTGGGCCTAG ACAGGTCA GAGGGGCAGG chr8:19179742-19179822 60 1.52e-04 TTGTGGGTTG ACAGGTCA CTCGTGCATC chr19:38687078-38687158 25 1.68e-04 ggcggagtgt ggaggtca agggcagagt chr5:171583785-171583865 26 1.68e-04 AGGAGATACA GGAGGTCA ACAAGGCATG chr6:106344213-106344293 30 1.68e-04 AAAGTATGCT GGAGGTCA GAGGCTCGGT chr3:65603599-65603679 54 1.68e-04 caggcatgaa ggaggtca cggagtgcag chr6:14452018-14452098 6 1.68e-04 AAGCA GGAGGTCA TGGCCAAAGA chr2:39173288-39173368 23 1.68e-04 CCAGCAGGCG GGAGGTCA TAGGGGAGAG chr3:171146196-171146276 13 1.99e-04 agcaagactg caggGTCA TAGCTTTATC chr4:25052505-25052585 29 1.99e-04 TCTCTCCTGT TAGGGTCA GATAAGTCCT chr1:51986724-51986804 29 1.99e-04 tgaggtaatg cagggtca cagaggctaa chr3:47544692-47544772 8 1.99e-04 tcacaca CAGGGTCA GGAAACATGG chr1:12145836-12145916 12 1.99e-04 GCAGCTGGAA TAGGGTCA TGAGGCATTT chr4:109616412-109616492 53 1.99e-04 aaagataaca cagggtca catcacattg chr1:8918300-8918380 31 1.99e-04 TCTGTGTCTC CAGGGTCA ATGTGGTAAA chr2:38779546-38779626 67 1.99e-04 caaagtcagg cagggtca ccctgt chr1:154469564-154469644 7 1.99e-04 GACCTT CAGGGTCA CAGCCTGGCC chr7:158806097-158806177 54 1.99e-04 aggttggggt cagggtca aggttgggat chr1:201636786-201636866 32 1.99e-04 TCTGAGGTTT TAGGGTCA AGTAACAAAC chr1:208335511-208335591 5 2.14e-04 tagg aaaggcca aagggctcag chr12:133070977-13307105 1 2.14e-04 . AAAGGCCA TCCTTATCTG chr1:110425063-110425143 9 2.14e-04 GTACTGAC AAAGGCCA CCTCTGTGCC chr2:196460664-196460744 17 2.45e-04 atgcagggtg tggggtca gtggggtgag chr21:45280771-45280851 28 2.45e-04 CATTTGGCCC TGGGGTCA TCTCTCTGGC chr16:11243040-11243120 32 2.45e-04 CTTGACCCCA TGGGGTCA CTGAGGCCCT chr5:78054083-78054163 20 2.45e-04 ACCTTCACCT TGGGGTCA AAAAGATTTG chr11:68585108-68585188 7 2.45e-04 GGAAGC TGGGGTCA AGGGCAGGAG chr1:218471890-218471970 20 2.45e-04 CATTCGTATC TGGGGTCA GGGAACAGAT chr11:62235386-62235466 45 2.45e-04 gacacagtgc cggggtca agggctcaaa chr10:9865390-9865470 63 2.91e-04 aactctaaat aaagggca ggtcaaagtt chr3:141050807-141050887 38 2.91e-04 CTTTGGGGAA GAGGGTCA GCAGCGGGGA chr1:201139801-201139881 6 2.91e-04 aatgg aaaggtta aatatttgcc chr15:74872923-74873003 21 2.91e-04 tagagagagc aaaggtta tcacctgtaa chr7:158533620-158533700 23 2.91e-04 ACCAAGAGGA AAAGGTTA ACATCTGAAG chr11:118444101-11844418 28 2.91e-04 CAAGGATGAG AAAGGTTA ATGTGGTTGA chr10:100538213-10053829 19 2.91e-04 tgcgggatgt gagggtca gtggggcaag chr6:157209176-157209256 69 2.91e-04 CAGCCTCAGC AAAGGTTA TCTC chr1:101594151-101594231 22 3.36e-04 AGCAAAGCAC CCAGGTCA TAGACCAGTG chr3:133174976-133175056 49 3.36e-04 TGCACTTGCC TCAGGTCA GTTTGAGGCA chr12:122791108-12279118 61 3.36e-04 GCTCAAGATC AGAGGCCA TGACCTTTAA chr15:27465493-27465573 70 3.36e-04 tataccagag tcaggtca cca chr9:139129882-139129962 73 3.36e-04 tgtccgtgcc ccaggtca chr11:12267171-12267251 20 3.36e-04 GCCACCTgct ccaggtca gccacaggcc chr12:108308383-10830846 67 3.36e-04 accccctggc ccaggtca ccgact chrX:53285183-53285263 29 3.36e-04 ACCGCTGTGC TCAGGTCA CTGCCTGGGG chr4:6889874-6889954 15 3.36e-04 TCAGCCCCAC AGAGGCCA TTCATCCTTG chr2:206004790-206004870 54 3.36e-04 CGGCACATTG AGAGGCCA GGGCGGAGTA chr12:70559369-70559449 13 3.98e-04 tgcaaagtgt gggggtca gcggggcagg chr10:126635623-12663570 3 3.98e-04 TG AGAGGGCA GATGTCAACT chr16:81658611-81658691 67 4.28e-04 cacaaggttc caaggcca ccaaga chr3:15339224-15339304 70 4.28e-04 gcttgacaga taaggcca agg chr16:193150-193230 46 4.59e-04 CTGGGCCTCA AAGGGCCA CCGCCATCTG chr1:198568149-198568229 7 5.34e-04 GTGGTC AAAGTTCA TGGTTGGGTT chr17:19913652-19913732 37 5.34e-04 GTTTTTTGAG TAAGGGCA CAAGTCAGCC chr1:226197426-226197506 43 5.34e-04 cctcttctga taagggca ctaatcccat chr7:134278862-134278942 65 5.34e-04 CTATCTGGCC TAAGGGCA TTTTGCTC chr12:22201704-22201784 4 5.34e-04 ggc aaagttca gtggacacct chr17:55420495-55420575 38 6.11e-04 tgaggtaggg aagggtta agccctcttg chr19:10410321-10410401 41 6.58e-04 GCCCTCTGAT CCGGGTCA CTCTTGGAGG chr3:151444011-151444091 56 7.35e-04 tcccttggtt cgaggtta tctaattttt chr1:46189103-46189183 68 7.35e-04 GTTAAACAGA AGAGTTCA AGTGA chr7:129409099-129409179 54 7.35e-04 CATGACCCTC CGAGGGCA GGTGAGGAGA chr20:23073188-23073268 3 7.35e-04 TT TGAGGTTA ACTTGTGCTC chr7:98725858-98725938 71 7.35e-04 ATTTGGCTGA TGAGGTTA AG chr1:48643089-48643169 37 7.81e-04 agagggctct gaagggca gcagcctgca chr19:29037265-29037345 40 8.28e-04 AGGGAATCCA GGAGGCCA CACATGACCT chr12:22199788-22199868 33 8.28e-04 GAAAAGTAAA GGAGGCCA CCCCGGTGCA chr19:49713411-49713491 73 9.34e-04 TCGGCAAAGT ACAGGGCA chr4:73572523-73572603 46 9.34e-04 ATTCGGTTGA CAAGTTCA ATCAGAGGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:125029980-125030060 1.5e-05 70_[+2]_2 chr2:47306261-47306341 1.5e-05 15_[+2]_57 chr2:39742570-39742650 1.5e-05 49_[+2]_23 chr4:32003806-32003886 1.5e-05 55_[+2]_17 chr2:85814833-85814913 1.5e-05 43_[+2]_29 chr19:49136775-49136855 1.5e-05 72_[+2] chr20:34771246-34771326 1.5e-05 6_[+2]_66 chr2:27230416-27230496 1.5e-05 47_[+2]_25 chr9:5850046-5850126 1.5e-05 18_[+2]_54 chr3:49195696-49195776 1.5e-05 54_[+2]_18 chr2:102667368-102667448 1.5e-05 37_[+2]_35 chr19:10445130-10445210 1.5e-05 50_[+2]_22 chr13:50985648-50985728 1.5e-05 40_[+2]_32 chr20:5762925-5763005 1.5e-05 20_[+2]_52 chr4:53886102-53886182 1.5e-05 49_[+2]_23 chrX:118611823-118611903 1.5e-05 31_[+2]_41 chr14:76006328-76006408 1.5e-05 28_[+2]_44 chr22:29666551-29666631 3e-05 31_[+2]_41 chr2:187749463-187749543 3e-05 36_[+2]_36 chr17:56514434-56514514 3e-05 6_[+2]_66 chr17:36572816-36572896 3e-05 50_[+2]_22 chr7:158656170-158656250 3e-05 29_[+2]_43 chr5:150505893-150505973 3e-05 37_[+2]_35 chr8:17987746-17987826 3e-05 37_[+2]_35 chr10:72453528-72453608 3e-05 9_[+2]_63 chr1:180579818-180579898 3e-05 33_[+2]_39 chrX:131119675-131119755 3e-05 48_[+2]_24 chr9:71123564-71123644 3e-05 35_[+2]_37 chr19:40512268-40512348 3e-05 52_[+2]_20 chr16:1701734-1701814 3e-05 9_[+2]_63 chr10:33249179-33249259 6e-05 14_[+2]_58 chr22:36766198-36766278 6e-05 28_[+2]_44 chr5:141087762-141087842 6e-05 29_[+2]_43 chr9:36215951-36216031 6e-05 50_[+2]_22 chr12:120972998-12097307 6e-05 35_[+2]_37 chr11:15601725-15601805 6e-05 21_[+2]_51 chr10:82026403-82026483 6e-05 69_[+2]_3 chr6:105483307-105483387 6e-05 33_[+2]_39 chr1:61557383-61557463 6e-05 38_[+2]_34 chr4:82727825-82727905 7.6e-05 34_[+2]_38 chr12:54688115-54688195 7.6e-05 20_[+2]_52 chr8:130595403-130595483 7.6e-05 35_[+2]_37 chr19:14618682-14618762 7.6e-05 23_[+2]_49 chr7:106962601-106962681 0.00011 60_[+2]_12 chr16:87755377-87755457 0.00011 60_[+2]_12 chr1:33475309-33475389 0.00012 48_[+2]_24 chr6:161665864-161665944 0.00012 16_[+2]_56 chr11:65319232-65319312 0.00014 59_[+2]_13 chr3:53384823-53384903 0.00014 35_[+2]_37 chr19:11379810-11379890 0.00015 28_[+2]_44 chr8:19179742-19179822 0.00015 59_[+2]_13 chr19:38687078-38687158 0.00017 24_[+2]_48 chr5:171583785-171583865 0.00017 25_[+2]_47 chr6:106344213-106344293 0.00017 29_[+2]_43 chr3:65603599-65603679 0.00017 53_[+2]_19 chr6:14452018-14452098 0.00017 5_[+2]_67 chr2:39173288-39173368 0.00017 22_[+2]_50 chr3:171146196-171146276 0.0002 12_[+2]_60 chr4:25052505-25052585 0.0002 28_[+2]_44 chr1:51986724-51986804 0.0002 28_[+2]_44 chr3:47544692-47544772 0.0002 7_[+2]_65 chr1:12145836-12145916 0.0002 11_[+2]_61 chr4:109616412-109616492 0.0002 52_[+2]_20 chr1:8918300-8918380 0.0002 30_[+2]_42 chr2:38779546-38779626 0.0002 66_[+2]_6 chr1:154469564-154469644 0.0002 6_[+2]_66 chr7:158806097-158806177 0.0002 53_[+2]_19 chr1:201636786-201636866 0.0002 31_[+2]_41 chr1:208335511-208335591 0.00021 4_[+2]_68 chr12:133070977-13307105 0.00021 [+2]_72 chr1:110425063-110425143 0.00021 8_[+2]_64 chr2:196460664-196460744 0.00025 16_[+2]_56 chr21:45280771-45280851 0.00025 27_[+2]_45 chr16:11243040-11243120 0.00025 31_[+2]_41 chr5:78054083-78054163 0.00025 19_[+2]_53 chr11:68585108-68585188 0.00025 6_[+2]_66 chr1:218471890-218471970 0.00025 19_[+2]_53 chr11:62235386-62235466 0.00025 44_[+2]_28 chr10:9865390-9865470 0.00029 62_[+2]_10 chr3:141050807-141050887 0.00029 37_[+2]_35 chr1:201139801-201139881 0.00029 5_[+2]_67 chr15:74872923-74873003 0.00029 20_[+2]_52 chr7:158533620-158533700 0.00029 22_[+2]_50 chr11:118444101-11844418 0.00029 27_[+2]_45 chr10:100538213-10053829 0.00029 18_[+2]_54 chr6:157209176-157209256 0.00029 68_[+2]_4 chr1:101594151-101594231 0.00034 21_[+2]_51 chr3:133174976-133175056 0.00034 48_[+2]_24 chr12:122791108-12279118 0.00034 60_[+2]_12 chr15:27465493-27465573 0.00034 69_[+2]_3 chr9:139129882-139129962 0.00034 72_[+2] chr11:12267171-12267251 0.00034 19_[+2]_53 chr12:108308383-10830846 0.00034 66_[+2]_6 chrX:53285183-53285263 0.00034 28_[+2]_44 chr4:6889874-6889954 0.00034 14_[+2]_58 chr2:206004790-206004870 0.00034 53_[+2]_19 chr12:70559369-70559449 0.0004 12_[+2]_60 chr10:126635623-12663570 0.0004 2_[+2]_70 chr16:81658611-81658691 0.00043 66_[+2]_6 chr3:15339224-15339304 0.00043 69_[+2]_3 chr16:193150-193230 0.00046 45_[+2]_27 chr1:198568149-198568229 0.00053 6_[+2]_66 chr17:19913652-19913732 0.00053 36_[+2]_36 chr1:226197426-226197506 0.00053 42_[+2]_30 chr7:134278862-134278942 0.00053 64_[+2]_8 chr12:22201704-22201784 0.00053 3_[+2]_69 chr17:55420495-55420575 0.00061 37_[+2]_35 chr19:10410321-10410401 0.00066 40_[+2]_32 chr3:151444011-151444091 0.00073 55_[+2]_17 chr1:46189103-46189183 0.00073 67_[+2]_5 chr7:129409099-129409179 0.00073 53_[+2]_19 chr20:23073188-23073268 0.00073 2_[+2]_70 chr7:98725858-98725938 0.00073 70_[+2]_2 chr1:48643089-48643169 0.00078 36_[+2]_36 chr19:29037265-29037345 0.00083 39_[+2]_33 chr12:22199788-22199868 0.00083 32_[+2]_40 chr19:49713411-49713491 0.00093 72_[+2] chr4:73572523-73572603 0.00093 45_[+2]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ARAGGTCA width=8 seqs=118 chr8:125029980-125030060 ( 71) AAAGGTCA 1 chr2:47306261-47306341 ( 16) AAAGGTCA 1 chr2:39742570-39742650 ( 50) AAAGGTCA 1 chr4:32003806-32003886 ( 56) AAAGGTCA 1 chr2:85814833-85814913 ( 44) AAAGGTCA 1 chr19:49136775-49136855 ( 73) AAAGGTCA 1 chr20:34771246-34771326 ( 7) AAAGGTCA 1 chr2:27230416-27230496 ( 48) AAAGGTCA 1 chr9:5850046-5850126 ( 19) AAAGGTCA 1 chr3:49195696-49195776 ( 55) AAAGGTCA 1 chr2:102667368-102667448 ( 38) AAAGGTCA 1 chr19:10445130-10445210 ( 51) AAAGGTCA 1 chr13:50985648-50985728 ( 41) AAAGGTCA 1 chr20:5762925-5763005 ( 21) AAAGGTCA 1 chr4:53886102-53886182 ( 50) AAAGGTCA 1 chrX:118611823-118611903 ( 32) AAAGGTCA 1 chr14:76006328-76006408 ( 29) AAAGGTCA 1 chr22:29666551-29666631 ( 32) AGAGGTCA 1 chr2:187749463-187749543 ( 37) AGAGGTCA 1 chr17:56514434-56514514 ( 7) AGAGGTCA 1 chr17:36572816-36572896 ( 51) AGAGGTCA 1 chr7:158656170-158656250 ( 30) AGAGGTCA 1 chr5:150505893-150505973 ( 38) AGAGGTCA 1 chr8:17987746-17987826 ( 38) AGAGGTCA 1 chr10:72453528-72453608 ( 10) AGAGGTCA 1 chr1:180579818-180579898 ( 34) AGAGGTCA 1 chrX:131119675-131119755 ( 49) AGAGGTCA 1 chr9:71123564-71123644 ( 36) AGAGGTCA 1 chr19:40512268-40512348 ( 53) AGAGGTCA 1 chr16:1701734-1701814 ( 10) AGAGGTCA 1 chr10:33249179-33249259 ( 15) TAAGGTCA 1 chr22:36766198-36766278 ( 29) CAAGGTCA 1 chr5:141087762-141087842 ( 30) CAAGGTCA 1 chr9:36215951-36216031 ( 51) CAAGGTCA 1 chr12:120972998-12097307 ( 36) TAAGGTCA 1 chr11:15601725-15601805 ( 22) TAAGGTCA 1 chr10:82026403-82026483 ( 70) CAAGGTCA 1 chr6:105483307-105483387 ( 34) CAAGGTCA 1 chr1:61557383-61557463 ( 39) TAAGGTCA 1 chr4:82727825-82727905 ( 35) AAGGGTCA 1 chr12:54688115-54688195 ( 21) AAGGGTCA 1 chr8:130595403-130595483 ( 36) AAGGGTCA 1 chr19:14618682-14618762 ( 24) AAGGGTCA 1 chr7:106962601-106962681 ( 61) TGAGGTCA 1 chr16:87755377-87755457 ( 61) TGAGGTCA 1 chr1:33475309-33475389 ( 49) GAAGGTCA 1 chr6:161665864-161665944 ( 17) GAAGGTCA 1 chr11:65319232-65319312 ( 60) AGGGGTCA 1 chr3:53384823-53384903 ( 36) AGGGGTCA 1 chr19:11379810-11379890 ( 29) ACAGGTCA 1 chr8:19179742-19179822 ( 60) ACAGGTCA 1 chr19:38687078-38687158 ( 25) GGAGGTCA 1 chr5:171583785-171583865 ( 26) GGAGGTCA 1 chr6:106344213-106344293 ( 30) GGAGGTCA 1 chr3:65603599-65603679 ( 54) GGAGGTCA 1 chr6:14452018-14452098 ( 6) GGAGGTCA 1 chr2:39173288-39173368 ( 23) GGAGGTCA 1 chr3:171146196-171146276 ( 13) CAGGGTCA 1 chr4:25052505-25052585 ( 29) TAGGGTCA 1 chr1:51986724-51986804 ( 29) CAGGGTCA 1 chr3:47544692-47544772 ( 8) CAGGGTCA 1 chr1:12145836-12145916 ( 12) TAGGGTCA 1 chr4:109616412-109616492 ( 53) CAGGGTCA 1 chr1:8918300-8918380 ( 31) CAGGGTCA 1 chr2:38779546-38779626 ( 67) CAGGGTCA 1 chr1:154469564-154469644 ( 7) CAGGGTCA 1 chr7:158806097-158806177 ( 54) CAGGGTCA 1 chr1:201636786-201636866 ( 32) TAGGGTCA 1 chr1:208335511-208335591 ( 5) AAAGGCCA 1 chr12:133070977-13307105 ( 1) AAAGGCCA 1 chr1:110425063-110425143 ( 9) AAAGGCCA 1 chr2:196460664-196460744 ( 17) TGGGGTCA 1 chr21:45280771-45280851 ( 28) TGGGGTCA 1 chr16:11243040-11243120 ( 32) TGGGGTCA 1 chr5:78054083-78054163 ( 20) TGGGGTCA 1 chr11:68585108-68585188 ( 7) TGGGGTCA 1 chr1:218471890-218471970 ( 20) TGGGGTCA 1 chr11:62235386-62235466 ( 45) CGGGGTCA 1 chr10:9865390-9865470 ( 63) AAAGGGCA 1 chr3:141050807-141050887 ( 38) GAGGGTCA 1 chr1:201139801-201139881 ( 6) AAAGGTTA 1 chr15:74872923-74873003 ( 21) AAAGGTTA 1 chr7:158533620-158533700 ( 23) AAAGGTTA 1 chr11:118444101-11844418 ( 28) AAAGGTTA 1 chr10:100538213-10053829 ( 19) GAGGGTCA 1 chr6:157209176-157209256 ( 69) AAAGGTTA 1 chr1:101594151-101594231 ( 22) CCAGGTCA 1 chr3:133174976-133175056 ( 49) TCAGGTCA 1 chr12:122791108-12279118 ( 61) AGAGGCCA 1 chr15:27465493-27465573 ( 70) TCAGGTCA 1 chr9:139129882-139129962 ( 73) CCAGGTCA 1 chr11:12267171-12267251 ( 20) CCAGGTCA 1 chr12:108308383-10830846 ( 67) CCAGGTCA 1 chrX:53285183-53285263 ( 29) TCAGGTCA 1 chr4:6889874-6889954 ( 15) AGAGGCCA 1 chr2:206004790-206004870 ( 54) AGAGGCCA 1 chr12:70559369-70559449 ( 13) GGGGGTCA 1 chr10:126635623-12663570 ( 3) AGAGGGCA 1 chr16:81658611-81658691 ( 67) CAAGGCCA 1 chr3:15339224-15339304 ( 70) TAAGGCCA 1 chr16:193150-193230 ( 46) AAGGGCCA 1 chr1:198568149-198568229 ( 7) AAAGTTCA 1 chr17:19913652-19913732 ( 37) TAAGGGCA 1 chr1:226197426-226197506 ( 43) TAAGGGCA 1 chr7:134278862-134278942 ( 65) TAAGGGCA 1 chr12:22201704-22201784 ( 4) AAAGTTCA 1 chr17:55420495-55420575 ( 38) AAGGGTTA 1 chr19:10410321-10410401 ( 41) CCGGGTCA 1 chr3:151444011-151444091 ( 56) CGAGGTTA 1 chr1:46189103-46189183 ( 68) AGAGTTCA 1 chr7:129409099-129409179 ( 54) CGAGGGCA 1 chr20:23073188-23073268 ( 3) TGAGGTTA 1 chr7:98725858-98725938 ( 71) TGAGGTTA 1 chr1:48643089-48643169 ( 37) GAAGGGCA 1 chr19:29037265-29037345 ( 40) GGAGGCCA 1 chr12:22199788-22199868 ( 33) GGAGGCCA 1 chr19:49713411-49713491 ( 73) ACAGGGCA 1 chr4:73572523-73572603 ( 46) CAAGTTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.53113 E= 4.2e-064 97 -36 -109 -30 116 -142 49 -1353 160 -1353 1 -1353 -1353 -1353 198 -1353 -1353 -1353 193 -289 -1353 -142 -190 174 -1353 189 -1353 -172 202 -1353 -1353 -1353 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 118 E= 4.2e-064 0.483051 0.194915 0.118644 0.203390 0.550847 0.093220 0.355932 0.000000 0.745763 0.000000 0.254237 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.966102 0.033898 0.000000 0.093220 0.067797 0.838983 0.000000 0.923729 0.000000 0.076271 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-2 regular expression -------------------------------------------------------------------------------- [AT][AG][AG]GGTCA -------------------------------------------------------------------------------- Time 8.44 secs. ******************************************************************************** ******************************************************************************** MOTIF BCTTATCT MEME-3 width = 8 sites = 44 llr = 383 E-value = 6.6e-018 ******************************************************************************** -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::a::2 pos.-specific C 37::::a: probability G 31:::::: matrix T 43aa:a:8 bits 2.0 ***** 1.8 ***** 1.6 ***** 1.4 ****** Relative 1.2 ****** Entropy 1.0 ****** (12.5 bits) 0.8 ******* 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCTTATCT consensus CT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:8254565-8254645 53 1.53e-05 CCTGTGGTTT TCTTATCT AGCATTTTGA chr12:56695079-56695159 68 1.53e-05 GACAAGAGCA TCTTATCT ACAAA chr18:47922530-47922610 23 1.53e-05 accacagtct tcttatct tctgtaacaa chr3:53384823-53384903 11 1.53e-05 ttttatggtg tcttatct tcctctggca chr3:52947064-52947144 26 1.53e-05 ctgaaaggTC TCTTATCT GTTACTTGCA chr12:108308383-10830846 9 1.53e-05 ggcactat tcttatct ctgttttgca chr19:40512268-40512348 8 1.53e-05 TGTTTTC TCTTATCT GTGCTCAAAC chr1:68387925-68388005 69 1.53e-05 aaaggagcct tcttatct ctga chr18:52613522-52613602 18 3.04e-05 taaaatattt ccttatct agccctttac chr17:37027852-37027932 8 3.04e-05 TTGGACA CCTTATCT CTCCCCTCCC chr16:56323931-56324011 11 3.04e-05 ataaagccag ccttatct cctgtagctc chr11:73727501-73727581 40 3.04e-05 ACCTAGGGGG CCTTATCT GCAAGGCCCA chr1:154469564-154469644 51 3.04e-05 ACACGGAGGG CCTTATCT CTGTAAGCAG chr11:62235386-62235466 20 3.04e-05 cttcctgaag ccttatct caggtcagac chr4:14922076-14922156 61 4.58e-05 CTCCAAAATA GCTTATCT GTGCATTCAT chr6:15970905-15970985 27 4.58e-05 GCCTGCACAG GCTTATCT TCCACAAGTA chr1:33475309-33475389 68 4.58e-05 GAGGTTGCAG GCTTATCT CATAT chr21:45280771-45280851 53 4.58e-05 GGCTCAGTTT GCTTATCT GTGAGCCCAG chr2:27230416-27230496 27 4.58e-05 cagtcttgga gcttatct ttagaacaca chr9:131355470-131355550 39 4.58e-05 GTCGATGACT GCTTATCT CATTGGTTGC chr8:19179742-19179822 13 4.58e-05 TGCCAGAGGT GCTTATCT GTGCTGCAGA chr10:94837859-94837939 22 6.11e-05 CAGATAAAGT TTTTATCT ATCCCAGGCA chr7:126339144-126339224 4 6.11e-05 GAC TTTTATCT AATCTTAACC chr10:100538213-10053829 46 6.11e-05 gtcaagtaag ttttatct agctgtccca chr1:193083233-193083313 4 6.11e-05 TAA TTTTATCT GCTTGGAATC chr3:171146196-171146276 24 7.64e-05 aggGTCATAG CTTTATCT CTCCCCCACC chr6:10750134-10750214 18 7.64e-05 ATTTTTGCCT CTTTATCT AAAGGTAGGC chr4:48593566-48593646 64 7.64e-05 gctgtgtcat ctttatct gcatttcag chr7:134278862-134278942 49 7.64e-05 TTAACTGGGC CTTTATCT ATCTGGCCTA chr17:55420495-55420575 6 7.64e-05 TGTta ctttatct ttctgcacag chr10:22678915-22678995 35 1.07e-04 GGTGTGGGTT TCTTATCA GCATAGAAAA chr16:81658611-81658691 2 1.07e-04 t tcttatca acatttgcag chr9:110919077-110919157 1 1.07e-04 . gtttatct cattgcttgg chr2:102667368-102667448 5 1.07e-04 GATG GTTTATCT TGACAGCAGC chr2:206004790-206004870 9 1.07e-04 TTGGCATC TCTTATCA GAAGCACACA chr1:25804005-25804085 16 1.22e-04 AGCTGAGGCT CCTTATCA TCCCCAGGGG chr1:180572554-180572634 9 1.22e-04 GGTTAAGA CCTTATCA GCCACTCTGC chr3:133472768-133472848 12 1.37e-04 AGGGGCATAT GCTTATCA GAGAAACACA chr9:129931157-129931237 9 1.37e-04 CCTGCAGG GCTTATCA GAGTCCACAG chr6:70873026-70873106 36 1.37e-04 CCTTCCAAGG GCTTATCA GCAGGATACA chr12:31910163-31910243 13 1.52e-04 acagtagtgg tgttatct ataggagcaa chr4:96210541-96210621 8 1.52e-04 TTCATGT TGTTATCT GCTGCTGGCC chr2:38779546-38779626 12 1.52e-04 tctagattgg tgttatct tccctttgac chr16:87755377-87755457 26 1.68e-04 TATGCATGGA CGTTATCT CCTGACCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:8254565-8254645 1.5e-05 52_[+3]_20 chr12:56695079-56695159 1.5e-05 67_[+3]_5 chr18:47922530-47922610 1.5e-05 22_[+3]_50 chr3:53384823-53384903 1.5e-05 10_[+3]_62 chr3:52947064-52947144 1.5e-05 25_[+3]_47 chr12:108308383-10830846 1.5e-05 8_[+3]_64 chr19:40512268-40512348 1.5e-05 7_[+3]_65 chr1:68387925-68388005 1.5e-05 68_[+3]_4 chr18:52613522-52613602 3e-05 17_[+3]_55 chr17:37027852-37027932 3e-05 7_[+3]_65 chr16:56323931-56324011 3e-05 10_[+3]_62 chr11:73727501-73727581 3e-05 39_[+3]_33 chr1:154469564-154469644 3e-05 50_[+3]_22 chr11:62235386-62235466 3e-05 19_[+3]_53 chr4:14922076-14922156 4.6e-05 60_[+3]_12 chr6:15970905-15970985 4.6e-05 26_[+3]_46 chr1:33475309-33475389 4.6e-05 67_[+3]_5 chr21:45280771-45280851 4.6e-05 52_[+3]_20 chr2:27230416-27230496 4.6e-05 26_[+3]_46 chr9:131355470-131355550 4.6e-05 38_[+3]_34 chr8:19179742-19179822 4.6e-05 12_[+3]_60 chr10:94837859-94837939 6.1e-05 21_[+3]_51 chr7:126339144-126339224 6.1e-05 3_[+3]_69 chr10:100538213-10053829 6.1e-05 45_[+3]_27 chr1:193083233-193083313 6.1e-05 3_[+3]_69 chr3:171146196-171146276 7.6e-05 23_[+3]_49 chr6:10750134-10750214 7.6e-05 17_[+3]_55 chr4:48593566-48593646 7.6e-05 63_[+3]_9 chr7:134278862-134278942 7.6e-05 48_[+3]_24 chr17:55420495-55420575 7.6e-05 5_[+3]_67 chr10:22678915-22678995 0.00011 34_[+3]_38 chr16:81658611-81658691 0.00011 1_[+3]_71 chr9:110919077-110919157 0.00011 [+3]_72 chr2:102667368-102667448 0.00011 4_[+3]_68 chr2:206004790-206004870 0.00011 8_[+3]_64 chr1:25804005-25804085 0.00012 15_[+3]_57 chr1:180572554-180572634 0.00012 8_[+3]_64 chr3:133472768-133472848 0.00014 11_[+3]_61 chr9:129931157-129931237 0.00014 8_[+3]_64 chr6:70873026-70873106 0.00014 35_[+3]_37 chr12:31910163-31910243 0.00015 12_[+3]_60 chr4:96210541-96210621 0.00015 7_[+3]_65 chr2:38779546-38779626 0.00015 11_[+3]_61 chr16:87755377-87755457 0.00017 25_[+3]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BCTTATCT width=8 seqs=44 chr4:8254565-8254645 ( 53) TCTTATCT 1 chr12:56695079-56695159 ( 68) TCTTATCT 1 chr18:47922530-47922610 ( 23) TCTTATCT 1 chr3:53384823-53384903 ( 11) TCTTATCT 1 chr3:52947064-52947144 ( 26) TCTTATCT 1 chr12:108308383-10830846 ( 9) TCTTATCT 1 chr19:40512268-40512348 ( 8) TCTTATCT 1 chr1:68387925-68388005 ( 69) TCTTATCT 1 chr18:52613522-52613602 ( 18) CCTTATCT 1 chr17:37027852-37027932 ( 8) CCTTATCT 1 chr16:56323931-56324011 ( 11) CCTTATCT 1 chr11:73727501-73727581 ( 40) CCTTATCT 1 chr1:154469564-154469644 ( 51) CCTTATCT 1 chr11:62235386-62235466 ( 20) CCTTATCT 1 chr4:14922076-14922156 ( 61) GCTTATCT 1 chr6:15970905-15970985 ( 27) GCTTATCT 1 chr1:33475309-33475389 ( 68) GCTTATCT 1 chr21:45280771-45280851 ( 53) GCTTATCT 1 chr2:27230416-27230496 ( 27) GCTTATCT 1 chr9:131355470-131355550 ( 39) GCTTATCT 1 chr8:19179742-19179822 ( 13) GCTTATCT 1 chr10:94837859-94837939 ( 22) TTTTATCT 1 chr7:126339144-126339224 ( 4) TTTTATCT 1 chr10:100538213-10053829 ( 46) TTTTATCT 1 chr1:193083233-193083313 ( 4) TTTTATCT 1 chr3:171146196-171146276 ( 24) CTTTATCT 1 chr6:10750134-10750214 ( 18) CTTTATCT 1 chr4:48593566-48593646 ( 64) CTTTATCT 1 chr7:134278862-134278942 ( 49) CTTTATCT 1 chr17:55420495-55420575 ( 6) CTTTATCT 1 chr10:22678915-22678995 ( 35) TCTTATCA 1 chr16:81658611-81658691 ( 2) TCTTATCA 1 chr9:110919077-110919157 ( 1) GTTTATCT 1 chr2:102667368-102667448 ( 5) GTTTATCT 1 chr2:206004790-206004870 ( 9) TCTTATCA 1 chr1:25804005-25804085 ( 16) CCTTATCA 1 chr1:180572554-180572634 ( 9) CCTTATCA 1 chr3:133472768-133472848 ( 12) GCTTATCA 1 chr9:129931157-129931237 ( 9) GCTTATCA 1 chr6:70873026-70873106 ( 36) GCTTATCA 1 chr12:31910163-31910243 ( 13) TGTTATCT 1 chr4:96210541-96210621 ( 8) TGTTATCT 1 chr2:38779546-38779626 ( 12) TGTTATCT 1 chr16:87755377-87755457 ( 26) CGTTATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.04855 E= 6.6e-018 -1210 35 11 71 -1210 140 -148 0 -1210 -1210 -1210 200 -1210 -1210 -1210 200 202 -1210 -1210 -1210 -1210 -1210 -1210 200 -1210 200 -1210 -1210 -44 -1210 -1210 171 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 44 E= 6.6e-018 0.000000 0.318182 0.272727 0.409091 0.000000 0.659091 0.090909 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.181818 0.000000 0.000000 0.818182 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BCTTATCT MEME-3 regular expression -------------------------------------------------------------------------------- [TCG][CT]TTATCT -------------------------------------------------------------------------------- Time 11.78 secs. ******************************************************************************** ******************************************************************************** MOTIF DVCAGCTG MEME-4 width = 8 sites = 117 llr = 746 E-value = 9.6e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 32:8:23: pos.-specific C 22a::8:: probability G 24::8::a matrix T 31:22:7: bits 2.0 * * 1.8 * * 1.6 * * 1.4 * * * Relative 1.2 ****** Entropy 1.0 ****** (9.2 bits) 0.8 ****** 0.6 ****** 0.4 ****** 0.2 ******* 0.0 -------- Multilevel AGCAGCTG consensus TA T AA sequence GC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:185373071-185373151 2 1.54e-05 T AGCAGCTG TCTGGGACTC chr1:12145836-12145916 1 1.54e-05 . AGCAGCTG GAATAGGGTC chr7:99659271-99659351 51 1.54e-05 TGAGCCTGGA AGCAGCTG ATAGTCACTG chr16:89230977-89231057 36 1.54e-05 CTCTCCCACC AGCAGCTG GAGACGGAGA chr1:95100686-95100766 32 1.54e-05 GGGAGCGGGG AGCAGCTG GTTATCATGA chr7:107727612-107727692 25 3.10e-05 TCATGTTACA TGCAGCTG TTTCATGACC chr15:63655632-63655712 22 3.10e-05 TATCTGCCTA TGCAGCTG CTGTGGAGAC chr9:131355470-131355550 16 3.10e-05 GAGGTCGCGG TGCAGCTG TGTCGGTCGA chr3:130506688-130506768 26 3.10e-05 CCTTGCGGTT TGCAGCTG CGGTTTGCAA chr3:122801325-122801405 48 3.10e-05 TGGGTCGCTG TGCAGCTG GTGATGATTT chr3:49195696-49195776 33 7.69e-05 GCCACCTAGA GGCAGCTG CAGGGACAAA chr11:1804325-1804405 71 7.69e-05 GTGCCGGGTG ACCAGCTG AC chr7:140017543-140017623 62 7.69e-05 agcttggtct ggcagctg tggcaagatg chr8:130595403-130595483 56 7.69e-05 CGATATCATT AACAGCTG TCTGTACTGG chr1:95113896-95113976 31 7.69e-05 TATCTGTTTA GGCAGCTG GCGCATTTCC chr17:37050670-37050750 20 7.69e-05 atctgctgcc accagctg tgtgaccttg chr9:130843458-130843538 5 7.69e-05 CCTG AACAGCTG TGCTGCGTGT chr7:137628106-137628186 13 7.69e-05 TGGCTGAGCT AACAGCTG GGCAGTACTG chr4:96210541-96210621 71 1.23e-04 ATTAAGCAAA TACAGCTG CT chr21:47875769-47875849 43 1.23e-04 tctgaactgc tccagctg aggcctcaga chr10:72453528-72453608 62 1.23e-04 GATAACTCTC TCCAGCTG GCAGAGGCTC chr6:70873026-70873106 50 1.23e-04 ATCAGCAGGA TACAGCTG CTGTATCAGC chr5:150505893-150505973 2 1.38e-04 G AGCAGCAG GAAGGTGCAA chr2:27243338-27243418 43 1.38e-04 gtcagttagc agcagcag ctgacccttg chr3:53384823-53384903 73 1.38e-04 ggtttcttta agcagcag chr3:24561717-24561797 1 1.38e-04 . AGCAGCAG CACAGTGAAC chr1:208335511-208335591 23 1.84e-04 aagggctcag gacagctg acatccatta chr3:65603599-65603679 15 1.84e-04 caggcaggca tgcagcag gcactacaat chr11:12267171-12267251 35 1.84e-04 tcagccacag gccagctg tttgacctta chr1:198568149-198568229 44 2.30e-04 TGGTTAGAAA CACAGCTG CCGATATCTG chr1:48643089-48643169 15 2.30e-04 catggtagga agctgctg ggtcagaggg chr17:60996899-60996979 30 2.30e-04 TCTGTGGCTG CCCAGCTG TTGGTGGCTG chr22:38539588-38539668 63 2.30e-04 tatcgacaca agctgctg tgcctgcccc chr1:234740744-234740824 21 2.30e-04 TTGCCCTTTC CACAGCTG GATAGACTTA chr4:82727825-82727905 72 2.91e-04 GGACTGTACA ACCAGCAG C chr3:133174976-133175056 28 2.91e-04 TATCTTCTCT AACAGCAG GTCTGCACTT chr5:125867533-125867613 3 2.91e-04 TG AGCAGATG TGATAACTCT chr12:122791108-12279118 35 2.91e-04 ACCACAAAGG GGCAGCAG CTTGCTCTGC chr17:19913652-19913732 12 2.91e-04 AGGAGCTGCA GGCAGCAG ATAAAGTGTT chr9:139129882-139129962 41 2.91e-04 atcagcagtg aacagcag gataaacaca chr1:236696292-236696372 24 2.91e-04 CCAGGCTTAT GGCAGCAG TCAGTCACCC chr10:22678915-22678995 55 3.22e-04 ATAGAAAACC TGCTGCTG TATGTTAAAC chr16:56323931-56324011 42 3.22e-04 ccacaggctc tgctgctg actctttaaa chr19:49136775-49136855 55 3.22e-04 ATAGGGCAAG ATCAGCTG GGTCGGGTTC chr2:187749463-187749543 68 3.98e-04 TCCTCTTCAA TCCAGCAG CCAAC chr16:81658611-81658691 15 3.98e-04 tatcaacatt tgcagatg gggaaacctg chr17:26075264-26075344 35 3.98e-04 GCACATTCCC TCCAGCAG GGGATGCCCT chr7:112782550-112782630 38 3.98e-04 ttcctcattt tgcagatg aggaaactga chr12:108308383-10830846 23 3.98e-04 atctctgttt tgcagatg gaggagctga chr17:55420495-55420575 64 3.98e-04 tgacccactt tgcagatg aaatggagc chr2:39173288-39173368 12 3.98e-04 GTTGCAAGCC TCCAGCAG GCGGGAGGTC chr19:11464193-11464273 12 4.76e-04 GGGAGCCAGT GGCTGCTG GAAGGATGAC chr17:56514434-56514514 34 4.76e-04 ggccaagttc tgcatctg gtatagcatg chr6:15970905-15970985 73 4.76e-04 CTATTGACTC TGCATCTG chr5:141087762-141087842 41 4.76e-04 AAGGTCATCC TGCATCTG GAGCCACAGA chr11:118444101-11844418 62 4.76e-04 AGGAAATCAG AACTGCTG ACATCACTCA chr6:14452018-14452098 68 4.76e-04 CACAGCAACA TGCATCTG TCACT chr8:19179742-19179822 72 4.76e-04 AGGTCACTCG TGCATCTG A chr1:110805628-110805708 43 4.76e-04 ATGACCTGTT TGCATCTG TCACTTGCAC chr2:158755874-158755954 23 5.52e-04 ATGACCTTAG ACCAGATG GTCCCTGTGG chr19:11379810-11379890 71 5.52e-04 TTTTTCTTTG AACAGATG GC chr22:36766198-36766278 68 5.52e-04 ccaagattag ggcagatg gtctg chr2:102667368-102667448 14 5.52e-04 GGTTTATCTT GACAGCAG CAAGCCCACA chr1:218471890-218471970 31 5.52e-04 GGGGTCAGGG AACAGATG GCAAGTTTGA chr4:95220105-95220185 42 5.52e-04 atgcaggaat aacagatg tgcagtgacc chrX:131119675-131119755 73 6.14e-04 GTCTGTCTTT GTCAGCTG chr7:98725858-98725938 51 6.14e-04 AAAAGCAGAA TCCTGCTG ACATTTGGCT chr2:47306261-47306341 38 7.51e-04 tgtatctaac cacagcag agttaacaaa chr1:101594151-101594231 60 7.51e-04 CCCCTTCCTA AGCTGCAG TCTGCTTCTT chr2:39742570-39742650 3 7.51e-04 GT CACAGCAG ACCATTTCTG chr17:36572816-36572896 38 7.51e-04 cagataaggg agctgcag ggcagagagg chr3:67067736-67067816 28 7.51e-04 CCTGACCCAA AACATCTG GTTTGTGATA chr17:8323864-8323944 51 7.51e-04 CTGGACGCTG TCCAGATG TAGGTCAAGT chr12:22199788-22199868 50 7.51e-04 ACCCCGGTGC AACATCTG TGATAATATG chr3:133472768-133472848 26 7.51e-04 ATCAGAGAAA CACAGCAG GCTGTGTGCA chr10:63540250-63540330 56 7.51e-04 GTCTGAGCTT ACCATCTG GGTGGCCTAC chr12:54688115-54688195 57 7.51e-04 GCCCCAGATG CCCAGCAG AGGGAGCCGC chr6:34252800-34252880 72 7.51e-04 CTTTGATCCT TCCAGATG G chr12:120972998-12097307 62 7.51e-04 gtatttggct cacagcag gccttaagac chr9:129931157-129931237 22 7.51e-04 TATCAGAGTC CACAGCAG TAGCGCCCAG chr3:143282785-143282865 54 7.51e-04 atcgctgacc cacagcag tgtccagcac chr8:100649742-100649822 7 7.51e-04 ttagtt accatctg acttctgttc chrX:153119131-153119211 45 7.81e-04 ttcttgggcc ctcagctg tctctgctgg chr2:85814833-85814913 70 7.81e-04 gtctcagtca ctcagctg gtg chr9:36215951-36216031 26 7.81e-04 CCAGTGGCTT CTCAGCTG TCCTAAGAAG chr11:15601725-15601805 4 7.81e-04 TGA CTCAGCTG AACAAaggtc chr6:163991739-163991819 58 8.89e-04 GACCATGCCT GCCTGCTG ATCAGTTAAC chr5:142232493-142232573 31 8.89e-04 TTTTGCAGAG GCCTGCTG CTTTGAAACC chr9:5850046-5850126 31 8.89e-04 aggtcacaca gcctgctg ttatcagagc chr7:121035013-121035093 66 8.89e-04 agttcatatt tccatctg taaaact chr10:126635623-12663570 26 8.89e-04 CAACTAACAC ATCAGCAG TATCGAGCAA chr8:2645847-2645927 11 8.89e-04 taaccctcac tgctgcag gattgctgat chr20:34771246-34771326 43 9.50e-04 TGGGAGATAA GACAGATG TTCCTGGAAC chr9:71123564-71123644 62 9.50e-04 CACTTCTCTT GCCAGATG GATGGGTTTG chr6:161665864-161665944 34 9.50e-04 ACCAACCACA GACAGATG GGCCAAAACC chr16:193150-193230 56 1.13e-03 AAGGGCCACC GCCATCTG CAGGAGGGCC chr1:201139801-201139881 51 1.13e-03 GCAAGTGTAT TGCATCAG GGTTGAACAG chr1:25804005-25804085 47 1.13e-03 ATGGGGTCCA ACCTGCAG CCCACAGACA chr21:45280771-45280851 66 1.13e-03 TATCTGTGAG CCCAGATG TCGGCAA chr11:67367986-67368066 31 1.13e-03 CCTCATGACC GGCTGCAG CCACAGAGGT chr4:73572523-73572603 10 1.13e-03 GAGGAGCAG AGCTGATG TCCGGATGGA chr2:201036670-201036750 69 1.13e-03 cataaacgca cacagatg gaag chr7:30280151-30280231 20 1.19e-03 TGGTTTGCTG GGCAGAAG GAAAAGCACC chr15:81388189-81388269 40 1.19e-03 TGATAAGGAC AACAGAAG TCTGTTTTTG chr18:33780471-33780551 60 1.65e-03 GAGGACTGGG GCCTGCAG ATAAGAACTG chr4:48625599-48625679 66 1.65e-03 aatgaccata ggctgatg ccttatg chr17:25897373-25897453 49 1.71e-03 acctctgtgg ttcatctg acagtgcctg chr4:8254565-8254645 21 1.71e-03 CACTGCTTGC GTCTGCTG CATGACCCTA chr8:17987746-17987826 4 1.71e-03 caa ttcatctg tcaacagact chr5:169514584-169514664 53 1.71e-03 caggtcacac ttcatctg gactgggttg chr11:129973425-12997350 13 1.85e-03 ATGCACTTAG CGCTGATG TGTTGACCTT chr1:172411687-172411767 26 1.85e-03 CTCATACAAG ACCTTCTG CCACTTGACC chr13:50985648-50985728 4 1.85e-03 CTG CCCTGCAG GCAGAATGAA chr2:70008648-70008728 7 1.85e-03 CAGAAG AACTTCTG CTTGGGTGGC chr16:9229757-9229837 57 1.85e-03 gacaggatgt ggcttctg ctctgtgcag chr1:46189103-46189183 35 1.99e-03 ATGCAAGTGT CACAGAAG GACCTCTGAC chr3:126627704-126627784 12 1.99e-03 acagataaga agctgaag aaacagaccc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:185373071-185373151 1.5e-05 1_[+4]_71 chr1:12145836-12145916 1.5e-05 [+4]_72 chr7:99659271-99659351 1.5e-05 50_[+4]_22 chr16:89230977-89231057 1.5e-05 35_[+4]_37 chr1:95100686-95100766 1.5e-05 31_[+4]_41 chr7:107727612-107727692 3.1e-05 24_[+4]_48 chr15:63655632-63655712 3.1e-05 21_[+4]_51 chr9:131355470-131355550 3.1e-05 15_[+4]_57 chr3:130506688-130506768 3.1e-05 25_[+4]_47 chr3:122801325-122801405 3.1e-05 47_[+4]_25 chr3:49195696-49195776 7.7e-05 32_[+4]_40 chr11:1804325-1804405 7.7e-05 70_[+4]_2 chr7:140017543-140017623 7.7e-05 61_[+4]_11 chr8:130595403-130595483 7.7e-05 55_[+4]_17 chr1:95113896-95113976 7.7e-05 30_[+4]_42 chr17:37050670-37050750 7.7e-05 19_[+4]_53 chr9:130843458-130843538 7.7e-05 4_[+4]_68 chr7:137628106-137628186 7.7e-05 12_[+4]_60 chr4:96210541-96210621 0.00012 70_[+4]_2 chr21:47875769-47875849 0.00012 42_[+4]_30 chr10:72453528-72453608 0.00012 61_[+4]_11 chr6:70873026-70873106 0.00012 49_[+4]_23 chr5:150505893-150505973 0.00014 1_[+4]_71 chr2:27243338-27243418 0.00014 42_[+4]_30 chr3:53384823-53384903 0.00014 72_[+4] chr3:24561717-24561797 0.00014 [+4]_72 chr1:208335511-208335591 0.00018 22_[+4]_50 chr3:65603599-65603679 0.00018 14_[+4]_58 chr11:12267171-12267251 0.00018 34_[+4]_38 chr1:198568149-198568229 0.00023 43_[+4]_29 chr1:48643089-48643169 0.00023 14_[+4]_58 chr17:60996899-60996979 0.00023 29_[+4]_43 chr22:38539588-38539668 0.00023 62_[+4]_10 chr1:234740744-234740824 0.00023 20_[+4]_52 chr4:82727825-82727905 0.00029 71_[+4]_1 chr3:133174976-133175056 0.00029 27_[+4]_45 chr5:125867533-125867613 0.00029 2_[+4]_70 chr12:122791108-12279118 0.00029 34_[+4]_38 chr17:19913652-19913732 0.00029 11_[+4]_61 chr9:139129882-139129962 0.00029 40_[+4]_32 chr1:236696292-236696372 0.00029 23_[+4]_49 chr10:22678915-22678995 0.00032 54_[+4]_18 chr16:56323931-56324011 0.00032 41_[+4]_31 chr19:49136775-49136855 0.00032 54_[+4]_18 chr2:187749463-187749543 0.0004 67_[+4]_5 chr16:81658611-81658691 0.0004 14_[+4]_58 chr17:26075264-26075344 0.0004 34_[+4]_38 chr7:112782550-112782630 0.0004 37_[+4]_35 chr12:108308383-10830846 0.0004 22_[+4]_50 chr17:55420495-55420575 0.0004 63_[+4]_9 chr2:39173288-39173368 0.0004 11_[+4]_61 chr19:11464193-11464273 0.00048 11_[+4]_61 chr17:56514434-56514514 0.00048 33_[+4]_39 chr6:15970905-15970985 0.00048 72_[+4] chr5:141087762-141087842 0.00048 40_[+4]_32 chr11:118444101-11844418 0.00048 61_[+4]_11 chr6:14452018-14452098 0.00048 67_[+4]_5 chr8:19179742-19179822 0.00048 71_[+4]_1 chr1:110805628-110805708 0.00048 42_[+4]_30 chr2:158755874-158755954 0.00055 22_[+4]_50 chr19:11379810-11379890 0.00055 70_[+4]_2 chr22:36766198-36766278 0.00055 67_[+4]_5 chr2:102667368-102667448 0.00055 13_[+4]_59 chr1:218471890-218471970 0.00055 30_[+4]_42 chr4:95220105-95220185 0.00055 41_[+4]_31 chrX:131119675-131119755 0.00061 72_[+4] chr7:98725858-98725938 0.00061 50_[+4]_22 chr2:47306261-47306341 0.00075 37_[+4]_35 chr1:101594151-101594231 0.00075 59_[+4]_13 chr2:39742570-39742650 0.00075 2_[+4]_70 chr17:36572816-36572896 0.00075 37_[+4]_35 chr3:67067736-67067816 0.00075 27_[+4]_45 chr17:8323864-8323944 0.00075 50_[+4]_22 chr12:22199788-22199868 0.00075 49_[+4]_23 chr3:133472768-133472848 0.00075 25_[+4]_47 chr10:63540250-63540330 0.00075 55_[+4]_17 chr12:54688115-54688195 0.00075 56_[+4]_16 chr6:34252800-34252880 0.00075 71_[+4]_1 chr12:120972998-12097307 0.00075 61_[+4]_11 chr9:129931157-129931237 0.00075 21_[+4]_51 chr3:143282785-143282865 0.00075 53_[+4]_19 chr8:100649742-100649822 0.00075 6_[+4]_66 chrX:153119131-153119211 0.00078 44_[+4]_28 chr2:85814833-85814913 0.00078 69_[+4]_3 chr9:36215951-36216031 0.00078 25_[+4]_47 chr11:15601725-15601805 0.00078 3_[+4]_69 chr6:163991739-163991819 0.00089 57_[+4]_15 chr5:142232493-142232573 0.00089 30_[+4]_42 chr9:5850046-5850126 0.00089 30_[+4]_42 chr7:121035013-121035093 0.00089 65_[+4]_7 chr10:126635623-12663570 0.00089 25_[+4]_47 chr8:2645847-2645927 0.00089 10_[+4]_62 chr20:34771246-34771326 0.00095 42_[+4]_30 chr9:71123564-71123644 0.00095 61_[+4]_11 chr6:161665864-161665944 0.00095 33_[+4]_39 chr16:193150-193230 0.0011 55_[+4]_17 chr1:201139801-201139881 0.0011 50_[+4]_22 chr1:25804005-25804085 0.0011 46_[+4]_26 chr21:45280771-45280851 0.0011 65_[+4]_7 chr11:67367986-67368066 0.0011 30_[+4]_42 chr4:73572523-73572603 0.0011 9_[+4]_63 chr2:201036670-201036750 0.0011 68_[+4]_4 chr7:30280151-30280231 0.0012 19_[+4]_53 chr15:81388189-81388269 0.0012 39_[+4]_33 chr18:33780471-33780551 0.0017 59_[+4]_13 chr4:48625599-48625679 0.0017 65_[+4]_7 chr17:25897373-25897453 0.0017 48_[+4]_24 chr4:8254565-8254645 0.0017 20_[+4]_52 chr8:17987746-17987826 0.0017 3_[+4]_69 chr5:169514584-169514664 0.0017 52_[+4]_20 chr11:129973425-12997350 0.0019 12_[+4]_60 chr1:172411687-172411767 0.0019 25_[+4]_47 chr13:50985648-50985728 0.0019 3_[+4]_69 chr2:70008648-70008728 0.0019 6_[+4]_66 chr16:9229757-9229837 0.0019 56_[+4]_16 chr1:46189103-46189183 0.002 34_[+4]_38 chr3:126627704-126627784 0.002 11_[+4]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF DVCAGCTG width=8 seqs=117 chr4:185373071-185373151 ( 2) AGCAGCTG 1 chr1:12145836-12145916 ( 1) AGCAGCTG 1 chr7:99659271-99659351 ( 51) AGCAGCTG 1 chr16:89230977-89231057 ( 36) AGCAGCTG 1 chr1:95100686-95100766 ( 32) AGCAGCTG 1 chr7:107727612-107727692 ( 25) TGCAGCTG 1 chr15:63655632-63655712 ( 22) TGCAGCTG 1 chr9:131355470-131355550 ( 16) TGCAGCTG 1 chr3:130506688-130506768 ( 26) TGCAGCTG 1 chr3:122801325-122801405 ( 48) TGCAGCTG 1 chr3:49195696-49195776 ( 33) GGCAGCTG 1 chr11:1804325-1804405 ( 71) ACCAGCTG 1 chr7:140017543-140017623 ( 62) GGCAGCTG 1 chr8:130595403-130595483 ( 56) AACAGCTG 1 chr1:95113896-95113976 ( 31) GGCAGCTG 1 chr17:37050670-37050750 ( 20) ACCAGCTG 1 chr9:130843458-130843538 ( 5) AACAGCTG 1 chr7:137628106-137628186 ( 13) AACAGCTG 1 chr4:96210541-96210621 ( 71) TACAGCTG 1 chr21:47875769-47875849 ( 43) TCCAGCTG 1 chr10:72453528-72453608 ( 62) TCCAGCTG 1 chr6:70873026-70873106 ( 50) TACAGCTG 1 chr5:150505893-150505973 ( 2) AGCAGCAG 1 chr2:27243338-27243418 ( 43) AGCAGCAG 1 chr3:53384823-53384903 ( 73) AGCAGCAG 1 chr3:24561717-24561797 ( 1) AGCAGCAG 1 chr1:208335511-208335591 ( 23) GACAGCTG 1 chr3:65603599-65603679 ( 15) TGCAGCAG 1 chr11:12267171-12267251 ( 35) GCCAGCTG 1 chr1:198568149-198568229 ( 44) CACAGCTG 1 chr1:48643089-48643169 ( 15) AGCTGCTG 1 chr17:60996899-60996979 ( 30) CCCAGCTG 1 chr22:38539588-38539668 ( 63) AGCTGCTG 1 chr1:234740744-234740824 ( 21) CACAGCTG 1 chr4:82727825-82727905 ( 72) ACCAGCAG 1 chr3:133174976-133175056 ( 28) AACAGCAG 1 chr5:125867533-125867613 ( 3) AGCAGATG 1 chr12:122791108-12279118 ( 35) GGCAGCAG 1 chr17:19913652-19913732 ( 12) GGCAGCAG 1 chr9:139129882-139129962 ( 41) AACAGCAG 1 chr1:236696292-236696372 ( 24) GGCAGCAG 1 chr10:22678915-22678995 ( 55) TGCTGCTG 1 chr16:56323931-56324011 ( 42) TGCTGCTG 1 chr19:49136775-49136855 ( 55) ATCAGCTG 1 chr2:187749463-187749543 ( 68) TCCAGCAG 1 chr16:81658611-81658691 ( 15) TGCAGATG 1 chr17:26075264-26075344 ( 35) TCCAGCAG 1 chr7:112782550-112782630 ( 38) TGCAGATG 1 chr12:108308383-10830846 ( 23) TGCAGATG 1 chr17:55420495-55420575 ( 64) TGCAGATG 1 chr2:39173288-39173368 ( 12) TCCAGCAG 1 chr19:11464193-11464273 ( 12) GGCTGCTG 1 chr17:56514434-56514514 ( 34) TGCATCTG 1 chr6:15970905-15970985 ( 73) TGCATCTG 1 chr5:141087762-141087842 ( 41) TGCATCTG 1 chr11:118444101-11844418 ( 62) AACTGCTG 1 chr6:14452018-14452098 ( 68) TGCATCTG 1 chr8:19179742-19179822 ( 72) TGCATCTG 1 chr1:110805628-110805708 ( 43) TGCATCTG 1 chr2:158755874-158755954 ( 23) ACCAGATG 1 chr19:11379810-11379890 ( 71) AACAGATG 1 chr22:36766198-36766278 ( 68) GGCAGATG 1 chr2:102667368-102667448 ( 14) GACAGCAG 1 chr1:218471890-218471970 ( 31) AACAGATG 1 chr4:95220105-95220185 ( 42) AACAGATG 1 chrX:131119675-131119755 ( 73) GTCAGCTG 1 chr7:98725858-98725938 ( 51) TCCTGCTG 1 chr2:47306261-47306341 ( 38) CACAGCAG 1 chr1:101594151-101594231 ( 60) AGCTGCAG 1 chr2:39742570-39742650 ( 3) CACAGCAG 1 chr17:36572816-36572896 ( 38) AGCTGCAG 1 chr3:67067736-67067816 ( 28) AACATCTG 1 chr17:8323864-8323944 ( 51) TCCAGATG 1 chr12:22199788-22199868 ( 50) AACATCTG 1 chr3:133472768-133472848 ( 26) CACAGCAG 1 chr10:63540250-63540330 ( 56) ACCATCTG 1 chr12:54688115-54688195 ( 57) CCCAGCAG 1 chr6:34252800-34252880 ( 72) TCCAGATG 1 chr12:120972998-12097307 ( 62) CACAGCAG 1 chr9:129931157-129931237 ( 22) CACAGCAG 1 chr3:143282785-143282865 ( 54) CACAGCAG 1 chr8:100649742-100649822 ( 7) ACCATCTG 1 chrX:153119131-153119211 ( 45) CTCAGCTG 1 chr2:85814833-85814913 ( 70) CTCAGCTG 1 chr9:36215951-36216031 ( 26) CTCAGCTG 1 chr11:15601725-15601805 ( 4) CTCAGCTG 1 chr6:163991739-163991819 ( 58) GCCTGCTG 1 chr5:142232493-142232573 ( 31) GCCTGCTG 1 chr9:5850046-5850126 ( 31) GCCTGCTG 1 chr7:121035013-121035093 ( 66) TCCATCTG 1 chr10:126635623-12663570 ( 26) ATCAGCAG 1 chr8:2645847-2645927 ( 11) TGCTGCAG 1 chr20:34771246-34771326 ( 43) GACAGATG 1 chr9:71123564-71123644 ( 62) GCCAGATG 1 chr6:161665864-161665944 ( 34) GACAGATG 1 chr16:193150-193230 ( 56) GCCATCTG 1 chr1:201139801-201139881 ( 51) TGCATCAG 1 chr1:25804005-25804085 ( 47) ACCTGCAG 1 chr21:45280771-45280851 ( 66) CCCAGATG 1 chr11:67367986-67368066 ( 31) GGCTGCAG 1 chr4:73572523-73572603 ( 10) AGCTGATG 1 chr2:201036670-201036750 ( 69) CACAGATG 1 chr7:30280151-30280231 ( 20) GGCAGAAG 1 chr15:81388189-81388269 ( 40) AACAGAAG 1 chr18:33780471-33780551 ( 60) GCCTGCAG 1 chr4:48625599-48625679 ( 66) GGCTGATG 1 chr17:25897373-25897453 ( 49) TTCATCTG 1 chr4:8254565-8254645 ( 21) GTCTGCTG 1 chr8:17987746-17987826 ( 4) TTCATCTG 1 chr5:169514584-169514664 ( 53) TTCATCTG 1 chr11:129973425-12997350 ( 13) CGCTGATG 1 chr1:172411687-172411767 ( 26) ACCTTCTG 1 chr13:50985648-50985728 ( 4) CCCTGCAG 1 chr2:70008648-70008728 ( 7) AACTTCTG 1 chr16:9229757-9229837 ( 57) GGCTTCTG 1 chr1:46189103-46189183 ( 35) CACAGAAG 1 chr3:126627704-126627784 ( 12) AGCTGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.53702 E= 9.6e-012 43 -62 -25 21 1 -6 73 -141 -1351 200 -1351 -1351 167 -1351 -1351 -23 -1351 -1351 173 -63 -27 167 -1351 -1351 28 -1351 -1351 148 -1351 -1351 198 -1351 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 117 E= 9.6e-012 0.333333 0.162393 0.213675 0.290598 0.247863 0.239316 0.418803 0.094017 0.000000 1.000000 0.000000 0.000000 0.786325 0.000000 0.000000 0.213675 0.000000 0.000000 0.837607 0.162393 0.205128 0.794872 0.000000 0.000000 0.299145 0.000000 0.000000 0.700855 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif DVCAGCTG MEME-4 regular expression -------------------------------------------------------------------------------- [ATG][GAC]C[AT]G[CA][TA]G -------------------------------------------------------------------------------- Time 15.05 secs. ******************************************************************************** ******************************************************************************** MOTIF SAGATAAG MEME-5 width = 8 sites = 29 llr = 250 E-value = 1.4e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 17:a:aa: pos.-specific C 6::::::3 probability G 3:a:1::7 matrix T :3::9::: bits 2.0 ** ** 1.8 ** ** 1.6 ***** 1.4 ***** Relative 1.2 ******* Entropy 1.0 ******* (12.5 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGATAAG consensus GT C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:56514434-56514514 59 1.49e-05 atggaacaga cagataag aacagccctg chr17:36572816-36572896 28 1.49e-05 gtctggttta cagataag ggagctgcag chr9:131059075-131059155 16 1.49e-05 AAGGTTTCAC CAGATAAG GGATTGATGG chr3:126627704-126627784 3 1.49e-05 ta cagataag aagctgaaga chr2:175045204-175045284 69 1.49e-05 TGTTATTCCT CAGATAAG ACAG chr6:106344213-106344293 73 3.00e-05 CAAGTGGAAT GAGATAAG chr3:47544692-47544772 61 3.00e-05 GTGTGTCTGA GAGATAAG GCAGTGGGGG chrX:53285183-53285263 71 3.00e-05 CTGTGGGGAT GAGATAAG AT chr9:111895169-111895249 50 3.00e-05 ccctgGAGTA GAGATAAG AATGACACAC chr1:101594151-101594231 4 4.47e-05 TAA CAGATAAC AGCAAAGCAC chr10:72453528-72453608 50 4.47e-05 GTGGTCATCC CAGATAAC TCTCTCCAGC chr10:97832594-97832674 32 4.47e-05 ATTTGTCTGG CAGATAAC CTTTTCACCT chr2:187749463-187749543 13 5.98e-05 TGGTGAGGAT CTGATAAG CTTTATTCTA chr11:15601725-15601805 62 5.98e-05 ctgtgtgaac ctgataag tcacttccca chr17:60996899-60996979 4 5.98e-05 GTC CTGATAAG TCATGGTTTC chrX:131119675-131119755 25 5.98e-05 CTGTGTGAGC CTGATAAG GAGGCAGAGA chr15:81388189-81388269 29 5.98e-05 CTGGCACTGA CTGATAAG GACAACAGAA chr17:54987726-54987806 62 7.46e-05 AACAGTGGCC AAGATAAG GTGTGGGCCA chr9:36215951-36216031 41 7.46e-05 CTGTCCTAAG AAGATAAG GACAAGGTCA chr5:149879197-149879277 62 7.46e-05 ATCCTCCCCC AAGATAAG CTCTGCCTGC chr21:47875769-47875849 73 8.95e-05 ctgtggaaga gagataac chr6:117916407-117916487 38 8.95e-05 gtggcttcca gagataac tgcttaggtc chr3:67067736-67067816 40 1.05e-04 CATCTGGTTT GTGATAAG GGCTCAATTA chr16:11243040-11243120 59 1.20e-04 TGGGGATGAG CTGATAAC AGGAATGGAT chr5:150505893-150505973 21 1.35e-04 AAGGTGCAAG CAGAGAAG CTGTGGTCAA chr1:154469564-154469644 66 1.35e-04 TCTCTGTAAG CAGAGAAG CAGGAAG chr16:11194427-11194507 40 1.49e-04 GACCTCCCGG AAGATAAC attagcagca chr7:158533620-158533700 44 1.79e-04 TCTGAAGCTT GTGATAAC TACAGACAAC chr3:14877658-14877738 59 1.95e-04 GGGATAACAA GAGAGAAG GGTGATGTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:56514434-56514514 1.5e-05 58_[+5]_14 chr17:36572816-36572896 1.5e-05 27_[+5]_45 chr9:131059075-131059155 1.5e-05 15_[+5]_57 chr3:126627704-126627784 1.5e-05 2_[+5]_70 chr2:175045204-175045284 1.5e-05 68_[+5]_4 chr6:106344213-106344293 3e-05 72_[+5] chr3:47544692-47544772 3e-05 60_[+5]_12 chrX:53285183-53285263 3e-05 70_[+5]_2 chr9:111895169-111895249 3e-05 49_[+5]_23 chr1:101594151-101594231 4.5e-05 3_[+5]_69 chr10:72453528-72453608 4.5e-05 49_[+5]_23 chr10:97832594-97832674 4.5e-05 31_[+5]_41 chr2:187749463-187749543 6e-05 12_[+5]_60 chr11:15601725-15601805 6e-05 61_[+5]_11 chr17:60996899-60996979 6e-05 3_[+5]_69 chrX:131119675-131119755 6e-05 24_[+5]_48 chr15:81388189-81388269 6e-05 28_[+5]_44 chr17:54987726-54987806 7.5e-05 61_[+5]_11 chr9:36215951-36216031 7.5e-05 40_[+5]_32 chr5:149879197-149879277 7.5e-05 61_[+5]_11 chr21:47875769-47875849 8.9e-05 72_[+5] chr6:117916407-117916487 8.9e-05 37_[+5]_35 chr3:67067736-67067816 0.0001 39_[+5]_33 chr16:11243040-11243120 0.00012 58_[+5]_14 chr5:150505893-150505973 0.00013 20_[+5]_52 chr1:154469564-154469644 0.00013 65_[+5]_7 chr16:11194427-11194507 0.00015 39_[+5]_33 chr7:158533620-158533700 0.00018 43_[+5]_29 chr3:14877658-14877738 0.00019 58_[+5]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SAGATAAG width=8 seqs=29 chr17:56514434-56514514 ( 59) CAGATAAG 1 chr17:36572816-36572896 ( 28) CAGATAAG 1 chr9:131059075-131059155 ( 16) CAGATAAG 1 chr3:126627704-126627784 ( 3) CAGATAAG 1 chr2:175045204-175045284 ( 69) CAGATAAG 1 chr6:106344213-106344293 ( 73) GAGATAAG 1 chr3:47544692-47544772 ( 61) GAGATAAG 1 chrX:53285183-53285263 ( 71) GAGATAAG 1 chr9:111895169-111895249 ( 50) GAGATAAG 1 chr1:101594151-101594231 ( 4) CAGATAAC 1 chr10:72453528-72453608 ( 50) CAGATAAC 1 chr10:97832594-97832674 ( 32) CAGATAAC 1 chr2:187749463-187749543 ( 13) CTGATAAG 1 chr11:15601725-15601805 ( 62) CTGATAAG 1 chr17:60996899-60996979 ( 4) CTGATAAG 1 chrX:131119675-131119755 ( 25) CTGATAAG 1 chr15:81388189-81388269 ( 29) CTGATAAG 1 chr17:54987726-54987806 ( 62) AAGATAAG 1 chr9:36215951-36216031 ( 41) AAGATAAG 1 chr5:149879197-149879277 ( 62) AAGATAAG 1 chr21:47875769-47875849 ( 73) GAGATAAC 1 chr6:117916407-117916487 ( 38) GAGATAAC 1 chr3:67067736-67067816 ( 40) GTGATAAG 1 chr16:11243040-11243120 ( 59) CTGATAAC 1 chr5:150505893-150505973 ( 21) CAGAGAAG 1 chr1:154469564-154469644 ( 66) CAGAGAAG 1 chr16:11194427-11194507 ( 40) AAGATAAC 1 chr7:158533620-158533700 ( 44) GTGATAAC 1 chr3:14877658-14877738 ( 59) GAGAGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.31821 E= 1.4e-001 -84 115 29 -1150 155 -1150 -1150 14 -1150 -1150 198 -1150 202 -1150 -1150 -1150 -1150 -1150 -129 184 202 -1150 -1150 -1150 202 -1150 -1150 -1150 -1150 15 152 -1150 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 29 E= 1.4e-001 0.137931 0.551724 0.310345 0.000000 0.724138 0.000000 0.000000 0.275862 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.103448 0.896552 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.275862 0.724138 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGATAAG MEME-5 regular expression -------------------------------------------------------------------------------- [CG][AT]GATAA[GC] -------------------------------------------------------------------------------- Time 18.11 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:63518399-63518479 9.10e-02 63_[+1(9.12e-05)]_9 chr2:206004790-206004870 7.96e-03 80 chr1:61557383-61557463 1.30e-03 17_[+2(6.03e-05)]_13_[+2(6.03e-05)]_\ 21_[+1(3.06e-05)]_5 chr2:201036670-201036750 3.91e-02 80 chr3:122801325-122801405 7.68e-04 24_[+1(1.53e-05)]_15_[+4(3.10e-05)]_\ 25 chr2:175045204-175045284 6.73e-04 9_[+1(1.53e-05)]_51_[+5(1.49e-05)]_\ 4 chr1:68387925-68388005 7.04e-03 68_[+3(1.53e-05)]_4 chr19:14618682-14618762 7.33e-02 23_[+2(7.55e-05)]_49 chr6:105483307-105483387 2.21e-03 33_[+2(6.03e-05)]_39 chr1:110805628-110805708 1.41e-02 12_[+1(1.53e-05)]_60 chr3:15339224-15339304 7.14e-04 65_[+5(1.49e-05)]_7 chr1:201636786-201636866 5.18e-02 80 chr1:234740744-234740824 5.02e-02 80 chr7:137628106-137628186 8.19e-03 12_[+4(7.69e-05)]_28_[+4(7.69e-05)]_\ 24 chr19:727274-727354 1.28e-01 80 chr2:39173288-39173368 7.60e-03 80 chr1:153751447-153751527 2.06e-02 61_[+1(1.53e-05)]_11 chr10:97832594-97832674 6.45e-03 31_[+5(4.47e-05)]_41 chr7:98725858-98725938 9.31e-03 80 chr6:157209176-157209256 3.22e-02 80 chr16:9229757-9229837 3.86e-04 4_[+1(1.53e-05)]_68 chr17:71285166-71285246 4.81e-01 80 chr1:110425063-110425143 1.61e-01 80 chr6:161665864-161665944 9.04e-03 80 chr4:73572523-73572603 1.70e-01 80 chr19:49713411-49713491 1.96e-02 18_[+1(6.08e-05)]_9_[+1(1.53e-05)]_\ 37 chr16:1701734-1701814 5.59e-02 9_[+2(3.01e-05)]_45_[+2(3.01e-05)]_\ 10 chr19:40512268-40512348 1.48e-03 7_[+3(1.53e-05)]_37_[+2(3.01e-05)]_\ 20 chr14:76006328-76006408 1.55e-02 28_[+2(1.49e-05)]_44 chr9:130843458-130843538 3.58e-03 4_[+4(7.69e-05)]_39_[+1(1.53e-05)]_\ 21 chr15:81388189-81388269 2.19e-04 2_[+1(1.53e-05)]_18_[+5(5.98e-05)]_\ 44 chrX:118611823-118611903 2.39e-02 31_[+2(1.49e-05)]_41 chr7:158806097-158806177 4.60e-01 80 chr16:56390007-56390087 5.24e-02 53_[+1(3.06e-05)]_19 chr8:100649742-100649822 2.40e-02 80 chr1:180572554-180572634 2.09e-02 80 chr4:48625599-48625679 6.66e-02 27_[+1(6.08e-05)]_45 chr6:136628697-136628777 1.11e-01 80 chr17:37050670-37050750 2.74e-02 19_[+4(7.69e-05)]_53 chr5:87674009-87674089 3.90e-02 80 chr3:24561717-24561797 6.72e-02 80 chr11:67367986-67368066 1.16e-01 80 chr4:53886102-53886182 1.58e-02 49_[+2(1.49e-05)]_23 chr17:55420495-55420575 6.81e-04 5_[+3(7.64e-05)]_67 chr3:130506688-130506768 1.71e-03 25_[+4(3.10e-05)]_22_[+1(6.08e-05)]_\ 17 chr9:71123564-71123644 5.92e-03 35_[+2(3.01e-05)]_37 chr11:62235386-62235466 1.62e-03 19_[+3(3.04e-05)]_53 chr2:70008648-70008728 2.55e-02 80 chr20:5762925-5763005 1.64e-02 20_[+2(1.49e-05)]_52 chr8:19179742-19179822 1.03e-05 12_[+3(4.58e-05)]_60 chr1:95100686-95100766 5.30e-04 31_[+4(1.54e-05)]_41 chr3:143734119-143734199 1.91e-02 80 chr3:143282785-143282865 5.22e-03 80 chr4:95220105-95220185 3.20e-03 54_[+1(1.53e-05)]_18 chr1:154469564-154469644 1.38e-04 50_[+3(3.04e-05)]_22 chr1:193083233-193083313 2.97e-02 3_[+3(6.11e-05)]_69 chr1:95113896-95113976 8.52e-04 30_[+4(7.69e-05)]_42 chr8:130595403-130595483 2.84e-03 35_[+2(7.55e-05)]_12_[+4(7.69e-05)]_\ 17 chrX:131119675-131119755 4.07e-05 24_[+5(5.98e-05)]_16_[+2(3.01e-05)]_\ 24 chr6:112126180-112126260 2.47e-02 80 chr9:131355470-131355550 2.57e-03 15_[+4(3.10e-05)]_15_[+3(4.58e-05)]_\ 17_[+4(3.10e-05)]_9 chr14:23184586-23184666 5.14e-02 80 chr1:19734397-19734477 4.70e-02 50_[+1(6.08e-05)]_22 chr16:89230977-89231057 3.72e-02 35_[+4(1.54e-05)]_37 chr1:218471890-218471970 1.15e-03 80 chr19:59069489-59069569 2.36e-01 9_[+1(6.08e-05)]_63 chr9:111895169-111895249 2.80e-03 49_[+5(3.00e-05)]_23 chr20:23073188-23073268 2.39e-03 80 chr6:70873026-70873106 8.33e-03 80 chr2:38779546-38779626 1.77e-02 80 chr11:68585108-68585188 3.82e-01 80 chr16:87755377-87755457 1.78e-04 35_[+1(6.08e-05)]_37 chr4:6889874-6889954 4.79e-02 80 chr13:50985648-50985728 5.25e-04 40_[+2(1.49e-05)]_32 chr10:82026403-82026483 5.86e-02 69_[+2(6.03e-05)]_3 chr22:38539588-38539668 6.51e-03 80 chr7:99659271-99659351 3.02e-03 50_[+4(1.54e-05)]_22 chr7:106962601-106962681 5.58e-02 80 chr5:149879197-149879277 9.62e-03 61_[+5(7.46e-05)]_11 chr7:140017543-140017623 1.19e-01 61_[+4(7.69e-05)]_11 chr1:52218445-52218525 9.28e-02 80 chr5:78054083-78054163 7.17e-02 80 chr1:8918300-8918380 7.81e-02 80 chr4:109616412-109616492 2.39e-02 80 chr12:133070977-13307105 2.30e-04 9_[+3(3.04e-05)]_63 chr19:51294414-51294494 1.00e-01 50_[+1(1.53e-05)]_22 chr14:78786721-78786801 1.64e-03 71_[+3(3.04e-05)]_1 chr17:60996899-60996979 4.67e-04 3_[+5(5.98e-05)]_69 chr3:126627704-126627784 6.28e-04 2_[+5(1.49e-05)]_70 chr2:21451500-21451580 3.72e-02 80 chr1:92783523-92783603 2.88e-02 57_[+1(6.08e-05)]_3_[+1(6.08e-05)]_\ 4 chr3:14877658-14877738 3.49e-03 80 chr8:2645847-2645927 1.53e-02 80 chr12:22201704-22201784 2.14e-02 80 chr16:11243040-11243120 1.09e-03 80 chr9:129931157-129931237 5.05e-03 80 chr10:100538213-10053829 7.03e-03 45_[+3(6.11e-05)]_27 chr10:126635623-12663570 4.11e-02 80 chrX:53285183-53285263 2.06e-03 70_[+5(3.00e-05)]_2 chr6:14452018-14452098 3.60e-03 80 chr7:129409099-129409179 3.72e-02 80 chr19:11512977-11513057 9.39e-01 80 chr1:48643089-48643169 4.05e-02 80 chr11:15601725-15601805 2.10e-04 21_[+2(6.03e-05)]_32_[+5(5.98e-05)]_\ 11 chr16:11194427-11194507 7.00e-03 28_[+1(6.08e-05)]_44 chr4:140187907-140187987 1.12e-01 80 chr12:120972998-12097307 1.11e-03 35_[+2(6.03e-05)]_37 chr11:118444101-11844418 2.32e-02 80 chr19:10445130-10445210 2.22e-03 50_[+2(1.49e-05)]_22 chr1:46189103-46189183 1.08e-02 80 chr6:34252800-34252880 1.63e-01 80 chr1:236696292-236696372 4.02e-04 44_[+1(6.08e-05)]_[+1(1.53e-05)]_20 chr12:108308383-10830846 1.52e-04 8_[+3(1.53e-05)]_64 chr7:72987293-72987373 2.15e-01 80 chr7:134278862-134278942 1.30e-02 48_[+3(7.64e-05)]_24 chr2:102667368-102667448 1.58e-04 37_[+2(1.49e-05)]_35 chr3:52947064-52947144 2.24e-02 25_[+3(1.53e-05)]_47 chr1:172411687-172411767 2.49e-02 38_[+1(6.08e-05)]_34 chr1:226197426-226197506 1.03e-02 38_[+5(5.98e-05)]_34 chr11:12267171-12267251 1.28e-03 44_[+1(9.12e-05)]_28 chr1:95273791-95273871 4.22e-02 80 chr12:54688115-54688195 9.41e-03 20_[+2(7.55e-05)]_52 chr11:18512815-18512895 3.68e-01 80 chr7:126339144-126339224 3.62e-03 3_[+3(6.11e-05)]_69 chr9:139129882-139129962 8.03e-03 80 chr20:43598959-43599039 4.14e-01 80 chr7:121035013-121035093 4.69e-03 38_[+1(3.06e-05)]_34 chr15:63655632-63655712 7.84e-03 21_[+4(3.10e-05)]_51 chr1:159046734-159046814 7.58e-02 80 chr15:27465493-27465573 9.83e-04 4_[+1(9.12e-05)]_68 chr11:1804325-1804405 2.75e-02 70_[+4(7.69e-05)]_2 chr17:19913652-19913732 1.31e-02 80 chr1:180579818-180579898 9.06e-03 33_[+2(3.01e-05)]_39 chr3:151444011-151444091 8.55e-02 80 chr9:36215951-36216031 2.31e-04 40_[+5(7.46e-05)]_2_[+2(6.03e-05)]_\ 22 chr12:70559369-70559449 1.36e-01 80 chr9:110919077-110919157 6.49e-03 80 chr1:198568149-198568229 7.79e-03 80 chr3:53384823-53384903 2.23e-04 10_[+3(1.53e-05)]_62 chr17:54987726-54987806 2.48e-03 16_[+1(1.53e-05)]_37_[+5(7.46e-05)]_\ 11 chr3:49195696-49195776 9.79e-04 32_[+4(7.69e-05)]_14_[+2(1.49e-05)]_\ 18 chr5:169514584-169514664 1.40e-03 80 chr10:72453528-72453608 2.17e-05 9_[+2(3.01e-05)]_32_[+5(4.47e-05)]_\ 23 chr3:179333391-179333471 7.40e-02 44_[+1(9.12e-05)]_28 chr12:122791108-12279118 1.60e-04 68_[+1(3.06e-05)]_4 chr6:117916407-117916487 5.84e-02 37_[+5(8.95e-05)]_35 chr12:124654243-12465432 2.08e-02 10_[+1(3.06e-05)]_62 chr3:65603599-65603679 4.69e-02 80 chr7:30280151-30280231 5.29e-03 57_[+2(1.49e-05)]_15 chr9:131059075-131059155 1.32e-02 15_[+5(1.49e-05)]_57 chr8:6286317-6286397 8.79e-02 80 chr1:12145836-12145916 1.07e-03 [+4(1.54e-05)]_72 chr5:125867533-125867613 9.60e-03 80 chr2:202298409-202298489 3.93e-03 23_[+5(1.49e-05)]_49 chr8:17987746-17987826 8.63e-03 37_[+2(3.01e-05)]_35 chr18:47922530-47922610 4.72e-03 22_[+3(1.53e-05)]_50 chr17:48439372-48439452 2.33e-01 80 chr9:5850046-5850126 2.50e-04 18_[+2(1.49e-05)]_54 chr10:63540250-63540330 3.56e-02 80 chr6:52166287-52166367 1.94e-01 80 chr3:143002425-143002505 8.48e-01 80 chr3:133174976-133175056 7.06e-03 80 chr17:39835567-39835647 3.08e-02 62_[+1(6.08e-05)]_10 chr3:133472768-133472848 3.01e-04 80 chr7:112782550-112782630 8.51e-03 80 chr5:657867-657947 1.32e-02 36_[+4(7.69e-05)]_36 chr2:27243338-27243418 3.72e-04 45_[+4(1.54e-05)]_27 chr5:141087762-141087842 3.01e-02 29_[+2(6.03e-05)]_43 chr22:36766198-36766278 9.10e-03 28_[+2(6.03e-05)]_44 chr4:82727825-82727905 1.27e-03 34_[+2(7.55e-05)]_38 chr17:26075264-26075344 9.24e-03 53_[+1(1.53e-05)]_19 chr1:208335511-208335591 3.80e-02 80 chr11:73727501-73727581 1.46e-02 39_[+3(3.04e-05)]_33 chr2:27230416-27230496 1.26e-03 26_[+3(4.58e-05)]_13_[+2(1.49e-05)]_\ 25 chr21:45280771-45280851 1.68e-03 52_[+3(4.58e-05)]_20 chr5:150505893-150505973 1.43e-06 37_[+2(3.01e-05)]_20_[+1(1.53e-05)]_\ 7 chr19:11379810-11379890 1.53e-02 80 chr7:158533620-158533700 1.41e-03 80 chr12:22199788-22199868 3.07e-03 10_[+1(9.12e-05)]_62 chr7:107727612-107727692 7.30e-04 24_[+4(3.10e-05)]_48 chr7:116250338-116250418 7.41e-02 80 chr1:25804005-25804085 2.25e-02 80 chr11:65319232-65319312 2.27e-01 80 chr17:8323864-8323944 2.01e-02 6_[+1(6.08e-05)]_66 chr19:10410321-10410401 1.32e-02 80 chr15:74872923-74873003 2.73e-03 80 chr3:47544692-47544772 4.14e-04 60_[+5(3.00e-05)]_12 chr21:47875769-47875849 2.62e-03 72_[+5(8.95e-05)] chr10:94837859-94837939 2.35e-02 21_[+3(6.11e-05)]_51 chr12:56695079-56695159 1.20e-03 67_[+3(1.53e-05)]_5 chr20:34771246-34771326 1.26e-04 6_[+2(1.49e-05)]_21_[+5(3.00e-05)]_\ 37 chr1:33475309-33475389 1.63e-04 67_[+3(4.58e-05)]_5 chr16:68018920-68019000 3.44e-01 80 chr7:158656170-158656250 6.13e-02 29_[+2(3.01e-05)]_43 chr19:49136775-49136855 2.90e-03 72_[+2(1.49e-05)] chr19:29037265-29037345 3.99e-03 51_[+1(3.06e-05)]_21 chr5:142232493-142232573 8.91e-03 50_[+1(6.08e-05)]_22 chr4:8254565-8254645 3.13e-03 52_[+3(1.53e-05)]_20 chr1:28563634-28563714 8.93e-02 80 chr16:56323931-56324011 1.25e-03 10_[+3(3.04e-05)]_62 chr6:135439423-135439503 2.10e-02 80 chr6:163991739-163991819 1.95e-03 7_[+1(9.12e-05)]_[+1(1.53e-05)]_57 chr4:48593566-48593646 8.39e-02 63_[+3(7.64e-05)]_9 chr4:124365632-124365712 6.81e-02 54_[+1(3.06e-05)]_18 chr18:33780471-33780551 5.59e-03 64_[+5(1.49e-05)]_8 chr2:85814833-85814913 3.62e-03 43_[+2(1.49e-05)]_29 chr2:179266871-179266951 6.46e-02 80 chr4:32003806-32003886 5.21e-03 55_[+2(1.49e-05)]_17 chr11:129973425-12997350 9.63e-02 23_[+1(9.12e-05)]_49 chr1:201139801-201139881 1.37e-01 80 chr3:67067736-67067816 1.09e-02 80 chr12:103023201-10302328 8.71e-03 28_[+1(3.06e-05)]_44 chr1:69945605-69945685 1.00e-01 80 chr20:40167548-40167628 4.73e-01 80 chr17:36572816-36572896 1.40e-04 27_[+5(1.49e-05)]_15_[+2(3.01e-05)]_\ 22 chr2:158755874-158755954 2.82e-02 13_[+1(9.12e-05)]_59 chr3:16587968-16588048 2.75e-02 80 chr3:141050807-141050887 1.22e-02 80 chr6:15970905-15970985 1.69e-03 26_[+3(4.58e-05)]_46 chr2:196460664-196460744 2.11e-01 80 chr17:56514434-56514514 2.33e-04 6_[+2(3.01e-05)]_44_[+5(1.49e-05)]_\ 14 chrX:153119131-153119211 2.48e-02 80 chr16:193150-193230 3.50e-02 80 chr1:51986724-51986804 1.36e-01 80 chr4:96210541-96210621 6.20e-03 80 chr10:9865390-9865470 7.08e-02 80 chr17:37027852-37027932 1.87e-03 7_[+3(3.04e-05)]_33_[+1(3.06e-05)]_\ 24 chr2:39742570-39742650 1.20e-02 49_[+2(1.49e-05)]_23 chr4:185373071-185373151 9.33e-03 1_[+4(1.54e-05)]_71 chr12:31910163-31910243 2.32e-03 51_[+1(1.53e-05)]_21 chr16:81658611-81658691 1.07e-03 80 chr2:187749463-187749543 2.78e-04 12_[+5(5.98e-05)]_16_[+2(3.01e-05)]_\ 36 chr6:106344213-106344293 3.92e-04 72_[+5(3.00e-05)] chr10:22678915-22678995 2.10e-03 80 chr5:171583785-171583865 4.95e-03 56_[+1(3.06e-05)]_16 chr1:101594151-101594231 3.19e-03 3_[+5(4.47e-05)]_69 chr18:52613522-52613602 3.71e-03 17_[+3(3.04e-05)]_23_[+1(3.06e-05)]_\ 24 chr2:47306261-47306341 6.21e-04 15_[+2(1.49e-05)]_57 chr22:29666551-29666631 1.31e-03 31_[+2(3.01e-05)]_41 chr19:11464193-11464273 3.41e-02 25_[+1(6.08e-05)]_47 chr4:14922076-14922156 6.28e-02 60_[+3(4.58e-05)]_12 chr19:38687078-38687158 5.03e-01 80 chr8:125029980-125030060 4.94e-02 70_[+2(1.49e-05)]_2 chr3:143026585-143026665 6.12e-02 12_[+1(1.53e-05)]_60 chr4:25052505-25052585 3.70e-03 34_[+5(1.49e-05)]_38 chr6:10750134-10750214 8.55e-02 17_[+3(7.64e-05)]_55 chr3:171146196-171146276 1.38e-03 23_[+3(7.64e-05)]_49 chr17:25897373-25897453 7.93e-03 36_[+1(1.53e-05)]_36 chr10:33249179-33249259 3.67e-03 14_[+2(6.03e-05)]_27_[+2(6.03e-05)]_\ 23 chr3:4867744-4867824 6.92e-02 17_[+1(3.06e-05)]_55 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************