******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/NR2F1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr6:6665810-6665890 1.0000 80 chr2:99029522-99029602 1.0000 80 chr21:36842885-36842965 1.0000 80 chr1:8499644-8499724 1.0000 80 chr12:122791127-12279120 1.0000 80 chr3:49195703-49195783 1.0000 80 chr7:2885693-2885773 1.0000 80 chr4:84176876-84176956 1.0000 80 chr1:48221223-48221303 1.0000 80 chr19:49713401-49713481 1.0000 80 chr11:66601918-66601998 1.0000 80 chr16:75163824-75163904 1.0000 80 chr1:182328955-182329035 1.0000 80 chr9:116036901-116036981 1.0000 80 chr9:75763499-75763579 1.0000 80 chr5:149501798-149501878 1.0000 80 chr1:29107986-29108066 1.0000 80 chr19:10197266-10197346 1.0000 80 chr19:11513001-11513081 1.0000 80 chr1:61557383-61557463 1.0000 80 chr2:30687602-30687682 1.0000 80 chr10:97832593-97832673 1.0000 80 chr11:76316950-76317030 1.0000 80 chr5:149730175-149730255 1.0000 80 chr17:26075268-26075348 1.0000 80 chr1:23428157-23428237 1.0000 80 chr8:125488598-125488678 1.0000 80 chr21:45011731-45011811 1.0000 80 chr2:29229745-29229825 1.0000 80 chr19:51294414-51294494 1.0000 80 chr5:78211113-78211193 1.0000 80 chr3:127314338-127314418 1.0000 80 chr4:1595968-1596048 1.0000 80 chr17:65106932-65107012 1.0000 80 chr3:39225964-39226044 1.0000 80 chr1:2203533-2203613 1.0000 80 chr3:52272263-52272343 1.0000 80 chr6:149450708-149450788 1.0000 80 chr16:85884053-85884133 1.0000 80 chr1:200398490-200398570 1.0000 80 chr1:95273796-95273876 1.0000 80 chr1:27934003-27934083 1.0000 80 chr3:141428126-141428206 1.0000 80 chr13:52736937-52737017 1.0000 80 chr6:105483311-105483391 1.0000 80 chr1:228974293-228974373 1.0000 80 chr12:131925526-13192560 1.0000 80 chr5:132759654-132759734 1.0000 80 chr16:77265085-77265165 1.0000 80 chr19:10416120-10416200 1.0000 80 chr20:35513917-35513997 1.0000 80 chr11:62240279-62240359 1.0000 80 chr7:99867451-99867531 1.0000 80 chr12:56596274-56596354 1.0000 80 chr19:59069477-59069557 1.0000 80 chr1:27675491-27675571 1.0000 80 chr21:40376126-40376206 1.0000 80 chr12:104351283-10435136 1.0000 80 chr15:58574627-58574707 1.0000 80 chr16:86962282-86962362 1.0000 80 chr7:99137104-99137184 1.0000 80 chr8:123772619-123772699 1.0000 80 chr1:213140125-213140205 1.0000 80 chr15:77359785-77359865 1.0000 80 chr1:246859892-246859972 1.0000 80 chr1:136884-136964 1.0000 80 chr17:55536810-55536890 1.0000 80 chr1:136680-136760 1.0000 80 chr16:29361495-29361575 1.0000 80 chr18:10081623-10081703 1.0000 80 chr8:11724164-11724244 1.0000 80 chr2:175901424-175901504 1.0000 80 chr2:9843956-9844036 1.0000 80 chr17:8080525-8080605 1.0000 80 chr19:46914875-46914955 1.0000 80 chr17:71285140-71285220 1.0000 80 chr22:40002813-40002893 1.0000 80 chr21:37582567-37582647 1.0000 80 chr7:116250342-116250422 1.0000 80 chr9:95871634-95871714 1.0000 80 chr11:15601733-15601813 1.0000 80 chr18:54318778-54318858 1.0000 80 chr10:32241069-32241149 1.0000 80 chr8:127335201-127335281 1.0000 80 chr16:90235311-90235391 1.0000 80 chr12:54688116-54688196 1.0000 80 chr20:44399901-44399981 1.0000 80 chr20:42087835-42087915 1.0000 80 chr5:150505894-150505974 1.0000 80 chr16:11243051-11243131 1.0000 80 chr12:122155071-12215515 1.0000 80 chr2:72025566-72025646 1.0000 80 chr18:12767157-12767237 1.0000 80 chr19:50864972-50865052 1.0000 80 chr1:176660972-176661052 1.0000 80 chr1:28481506-28481586 1.0000 80 chr4:185736683-185736763 1.0000 80 chr4:41911343-41911423 1.0000 80 chr1:53376399-53376479 1.0000 80 chr19:49136792-49136872 1.0000 80 chr22:38589769-38589849 1.0000 80 chr16:56390026-56390106 1.0000 80 chr2:65086624-65086704 1.0000 80 chr21:44357354-44357434 1.0000 80 chr17:57635538-57635618 1.0000 80 chr2:102667364-102667444 1.0000 80 chr19:50919325-50919405 1.0000 80 chr17:7370339-7370419 1.0000 80 chr7:121035005-121035085 1.0000 80 chr15:29360322-29360402 1.0000 80 chr3:46458053-46458133 1.0000 80 chr11:64027144-64027224 1.0000 80 chr17:6325374-6325454 1.0000 80 chr22:18260168-18260248 1.0000 80 chr22:19592473-19592553 1.0000 80 chr8:22287745-22287825 1.0000 80 chr5:49729-49809 1.0000 80 chr16:90235511-90235591 1.0000 80 chr19:1068262-1068342 1.0000 80 chr11:62235386-62235466 1.0000 80 chr12:65587062-65587142 1.0000 80 chr5:150632168-150632248 1.0000 80 chr19:13283396-13283476 1.0000 80 chr3:14877723-14877803 1.0000 80 chr19:8420647-8420727 1.0000 80 chr6:26219234-26219314 1.0000 80 chr13:114035512-11403559 1.0000 80 chr9:139917775-139917855 1.0000 80 chr19:4078341-4078421 1.0000 80 chr10:72453521-72453601 1.0000 80 chr6:7106519-7106599 1.0000 80 chr11:65406015-65406095 1.0000 80 chr11:73730473-73730553 1.0000 80 chr9:130184615-130184695 1.0000 80 chr2:68514879-68514959 1.0000 80 chrX:118611847-118611927 1.0000 80 chr19:38806263-38806343 1.0000 80 chr1:201139781-201139861 1.0000 80 chr2:201232022-201232102 1.0000 80 chr16:30198621-30198701 1.0000 80 chr1:161147739-161147819 1.0000 80 chr7:106456286-106456366 1.0000 80 chr17:37027845-37027925 1.0000 80 chr1:203725737-203725817 1.0000 80 chr12:117141187-11714126 1.0000 80 chr5:78054089-78054169 1.0000 80 chr19:19745179-19745259 1.0000 80 chr1:36936012-36936092 1.0000 80 chr1:45142312-45142392 1.0000 80 chr8:20061378-20061458 1.0000 80 chr16:79985437-79985517 1.0000 80 chr17:54987715-54987795 1.0000 80 chr6:36650151-36650231 1.0000 80 chr10:126329466-12632954 1.0000 80 chr18:43246630-43246710 1.0000 80 chr1:154469524-154469604 1.0000 80 chr19:38687052-38687132 1.0000 80 chr10:32790981-32791061 1.0000 80 chr20:49039765-49039845 1.0000 80 chr20:36825075-36825155 1.0000 80 chr16:2547485-2547565 1.0000 80 chr7:107204940-107205020 1.0000 80 chr20:35502104-35502184 1.0000 80 chr1:19835551-19835631 1.0000 80 chr4:154331156-154331236 1.0000 80 chr11:94877700-94877780 1.0000 80 chr3:186928861-186928941 1.0000 80 chr1:202131971-202132051 1.0000 80 chr22:47158720-47158800 1.0000 80 chr19:13162543-13162623 1.0000 80 chr16:79931670-79931750 1.0000 80 chr5:93430931-93431011 1.0000 80 chr11:75133711-75133791 1.0000 80 chr1:92783528-92783608 1.0000 80 chr1:211806929-211807009 1.0000 80 chr7:101331553-101331633 1.0000 80 chr11:65319234-65319314 1.0000 80 chr9:78968308-78968388 1.0000 80 chr5:149509686-149509766 1.0000 80 chr11:64073595-64073675 1.0000 80 chr19:41827982-41828062 1.0000 80 chr13:28982439-28982519 1.0000 80 chr7:158806121-158806201 1.0000 80 chr6:151695336-151695416 1.0000 80 chr4:38385361-38385441 1.0000 80 chr9:37362577-37362657 1.0000 80 chr6:170125477-170125557 1.0000 80 chr17:61920563-61920643 1.0000 80 chr17:36572800-36572880 1.0000 80 chr22:20267492-20267572 1.0000 80 chr15:51673523-51673603 1.0000 80 chr21:46738903-46738983 1.0000 80 chr1:231330875-231330955 1.0000 80 chr17:6374180-6374260 1.0000 80 chrX:109103050-109103130 1.0000 80 chr19:6568155-6568235 1.0000 80 chr5:6408849-6408929 1.0000 80 chr1:236696292-236696372 1.0000 80 chr2:27229506-27229586 1.0000 80 chr8:100649729-100649809 1.0000 80 chr3:16588013-16588093 1.0000 80 chr10:82026397-82026477 1.0000 80 chr8:23405466-23405546 1.0000 80 chr2:64246970-64247050 1.0000 80 chr13:50909293-50909373 1.0000 80 chr7:75536525-75536605 1.0000 80 chr16:87755381-87755461 1.0000 80 chr6:112365090-112365170 1.0000 80 chr1:11812869-11812949 1.0000 80 chr18:55578211-55578291 1.0000 80 chr17:4110417-4110497 1.0000 80 chr12:31910160-31910240 1.0000 80 chr1:211869049-211869129 1.0000 80 chr9:33165801-33165881 1.0000 80 chr9:124861714-124861794 1.0000 80 chr3:142569294-142569374 1.0000 80 chr17:76407713-76407793 1.0000 80 chr7:132521673-132521753 1.0000 80 chr18:53331262-53331342 1.0000 80 chr16:56998867-56998947 1.0000 80 chr7:129425030-129425110 1.0000 80 chr21:47438688-47438768 1.0000 80 chr6:105402494-105402574 1.0000 80 chr12:57395366-57395446 1.0000 80 chr6:158826493-158826573 1.0000 80 chr1:150849371-150849451 1.0000 80 chr10:73930997-73931077 1.0000 80 chrX:13077964-13078044 1.0000 80 chr1:15790960-15791040 1.0000 80 chr1:161277259-161277339 1.0000 80 chr8:8923468-8923548 1.0000 80 chr6:99873759-99873839 1.0000 80 chr16:69787-69867 1.0000 80 chr12:92172815-92172895 1.0000 80 chr1:46087992-46088072 1.0000 80 chr21:45277523-45277603 1.0000 80 chr8:11799830-11799910 1.0000 80 chr7:129485557-129485637 1.0000 80 chr16:30710512-30710592 1.0000 80 chr3:45506086-45506166 1.0000 80 chr6:30524562-30524642 1.0000 80 chr9:35731547-35731627 1.0000 80 chr22:20267287-20267367 1.0000 80 chr13:50735438-50735518 1.0000 80 chr8:27180422-27180502 1.0000 80 chr19:51041200-51041280 1.0000 80 chr6:15970895-15970975 1.0000 80 chr8:17987733-17987813 1.0000 80 chr5:133625329-133625409 1.0000 80 chr17:61920777-61920857 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_NR2F1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/NR2F1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.242 C 0.259 G 0.255 T 0.244 Background letter frequencies (from file dataset with add-one prior applied): A 0.242 C 0.259 G 0.255 T 0.244 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ARAGGTCA MEME-1 width = 8 sites = 131 llr = 1059 E-value = 1.3e-120 ******************************************************************************** -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 648::::a pos.-specific C 11::::a: probability G 252aa1:: matrix T 2::::9:: bits 2.0 ** ** 1.8 ** ** 1.6 ***** 1.4 ***** Relative 1.2 ****** Entropy 1.0 ****** (11.7 bits) 0.8 ****** 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGAGGTCA consensus AG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:17987733-17987813 51 1.49e-05 caggaaccgc agaggtca gaaaggagtg chr19:51041200-51041280 57 1.49e-05 TGACCTCAAG AGAGGTCA GCTCCTAGAT chrX:13077964-13078044 57 1.49e-05 GAAAGGGTCA AGAGGTCA GCTAGCCTGA chr1:150849371-150849451 33 1.49e-05 TCCTTGCGTA AGAGGTCA ATGACCGAGT chr3:142569294-142569374 26 1.49e-05 aagtctgtga agaggtca aaccacaata chr17:6374180-6374260 57 1.49e-05 GTCCAGGGTC AGAGGTCA AGGTTCCTCC chr17:36572800-36572880 67 1.49e-05 tgcagggcag agaggtca gaacac chr6:170125477-170125557 50 1.49e-05 CTCAGGTCAG AGAGGTCA CCACTGACGA chr9:37362577-37362657 34 1.49e-05 CCTTGCAGGG AGAGGTCA CTGACCTCTT chr22:47158720-47158800 65 1.49e-05 GTCAGGGGTC AGAGGTCA GGTGGCCG chr1:19835551-19835631 2 1.49e-05 a agaggtca ctttcatcat chr1:45142312-45142392 69 1.49e-05 tgatgggagc agaggtca aatt chr19:19745179-19745259 46 1.49e-05 GTCAAAGGTC AGAGGTCA GTGTCAGGGG chr10:72453521-72453601 17 1.49e-05 TGGGGCCTGC AGAGGTCA TGACCTTGGG chr16:90235511-90235591 8 1.49e-05 CGCTGAG AGAGGTCA GCCCGAGCCC chr1:53376399-53376479 27 1.49e-05 AAGAAGGCTG AGAGGTCA AAGGTCAAGT chr4:185736683-185736763 31 1.49e-05 CACAGCTCGC AGAGGTCA CAGCTATCAC chr5:150505894-150505974 37 1.49e-05 GCTGTGGTCA AGAGGTCA AGCAGGAGGA chr16:90235311-90235391 15 1.49e-05 CCACGTGGAC AGAGGTCA GCGTGAGCCC chr19:10416120-10416200 50 1.49e-05 CTGAAGGGTC AGAGGTCA AAGGGCAGGG chr3:52272263-52272343 42 1.49e-05 GAGGGAGGTC AGAGGTCA AGGTCAGATA chr7:129425030-129425110 38 2.89e-05 CAGATTATCC AAAGGTCA GTGACCCAGA chr17:76407713-76407793 57 2.89e-05 TGTCAGGCCC AAAGGTCA GGCCCTGGGA chr2:64246970-64247050 46 2.89e-05 TCCAAAGGTT AAAGGTCA CCCCTCCGCA chr5:6408849-6408929 9 2.89e-05 caaaccca aaaggtca gggttatcat chr19:6568155-6568235 48 2.89e-05 gcagatgacc aaaggtca gtcttaggac chr11:64073595-64073675 33 2.89e-05 TCTCTGGGTC AAAGGTCA TCGCACCGGC chr12:117141187-11714126 56 2.89e-05 CCGGGCAATG AAAGGTCA GGGACAGGGC chr7:106456286-106456366 19 2.89e-05 ACACAAGGTC AAAGGTCA AATCCCAATC chrX:118611847-118611927 8 2.89e-05 AGAGACC AAAGGTCA AAGATAAATC chr6:26219234-26219314 32 2.89e-05 ATCTGATATG AAAGGTCA TGGCCTGCAC chr19:13283396-13283476 34 2.89e-05 GCATCCCCAT AAAGGTCA GGACCCTTGA chr2:102667364-102667444 42 2.89e-05 CACAGATGTC AAAGGTCA CTCATACATC chr22:38589769-38589849 32 2.89e-05 gcatgctgtc aaaggtca agacagatta chr19:49136792-49136872 56 2.89e-05 GGTCGGGTTC AAAGGTCA TCAACACCTC chr18:12767157-12767237 24 2.89e-05 ggtcagatgt aaaggtca gctcagtgac chr8:127335201-127335281 22 2.89e-05 aggtcagcct aaaggtca cttcctcttg chr21:40376126-40376206 27 2.89e-05 ATCCAGGGTT AAAGGTCA GGGTGACTGG chr20:35513917-35513997 24 2.89e-05 ccttcaggtc aaaggtca tgtccttcga chr1:27934003-27934083 22 2.89e-05 GCCAGAGGGC AAAGGTCA GCTTTGTTCC chr16:85884053-85884133 56 2.89e-05 agctgagggc aaaggtca ggtctctctt chr1:2203533-2203613 20 2.89e-05 GGCCGGGTCA AAAGGTCA CTGCCCCGAT chr11:76316950-76317030 39 2.89e-05 cctcggggtc aaaggtca aaggtcaagc chr5:149501798-149501878 57 2.89e-05 ACCCCAGGGC AAAGGTCA CAAGACGGGT chr3:49195703-49195783 48 2.89e-05 GACAAAGGGC AAAGGTCA GGGTCATGAA chr1:8499644-8499724 44 2.89e-05 GAGGAGCAAG AAAGGTCA ATGACCCTTG chr17:61920777-61920857 1 4.39e-05 . tgaggtca gaagttcgag chr21:45277523-45277603 38 4.39e-05 gcagatcacc tgaggtca ggagttcaag chr1:11812869-11812949 36 4.39e-05 aagaagacaa tgaggtca gaaggtggct chr16:87755381-87755461 57 4.39e-05 CAATGACAAC TGAGGTCA AAACGCAGGC chrX:109103050-109103130 69 4.39e-05 taagttaaaa tgaggtca ttag chr21:37582567-37582647 23 4.39e-05 gtgaatcact tgaggtca ggaggtcaag chr11:62240279-62240359 63 4.39e-05 gtggatcgct tgaggtca ggaggtcaag chr1:48221223-48221303 31 4.39e-05 GTTTAGAGCC TGAGGTCA CGACCTGAGT chr10:73930997-73931077 7 7.38e-05 tcttct ggaggtca gaagtctaac chr16:56998867-56998947 62 7.38e-05 ggaggccagg ggaggtca aggctgcggt chr18:53331262-53331342 5 7.38e-05 GTGA GGAGGTCA GAAGGTCAAA chr17:61920563-61920643 1 7.38e-05 . TAAGGTCA CTTAGGGGCT chr1:211806929-211807009 70 7.38e-05 AGACAGGTCA GGAGGTCA GTG chr19:38687052-38687132 31 7.38e-05 ggcagagcaa ggaggtca agggcggagt chr2:68514879-68514959 11 7.38e-05 cccaggccat ggaggtca gatcctatca chr15:29360322-29360402 18 7.38e-05 AGGCCACAGG GGAGGTCA CAGGTCAAGC chr17:57635538-57635618 12 7.38e-05 gcctaatggc taaggtca gcatgaccat chr1:176660972-176661052 49 7.38e-05 TGCCCAACTT TAAGGTCA TGACCTTGCT chr11:15601733-15601813 14 7.38e-05 AACAAaggtc taaggtca agttctggct chr9:95871634-95871714 33 7.38e-05 TCCAGGTCCT GGAGGTCA AGGCCCAGTG chr15:58574627-58574707 51 7.38e-05 actgaacaaa ggaggtca gaaggtcagc chr12:104351283-10435136 29 7.38e-05 TGCTTTTATG GGAGGTCA CCCTCCTGTG chr1:200398490-200398570 30 7.38e-05 cttgggccca ggaggtca aggttgcagt chr1:23428157-23428237 30 7.38e-05 AATGGGGTTA GGAGGTCA CTTATCTCTG chr1:61557383-61557463 39 7.38e-05 TTTAAGTTGT TAAGGTCA TAACCTTAGC chr7:2885693-2885773 7 7.38e-05 agccca ggaggtca agggtgcagt chr21:36842885-36842965 7 7.38e-05 ATATGT GGAGGTCA TCTGATAAGC chr17:7370339-7370419 33 8.86e-05 AGGTCATGGT GAAGGTCA AGGGGTCATG chr12:122155071-12215515 8 8.86e-05 GACCGCA GAAGGTCA CTTACAGACA chr2:99029522-99029602 34 8.86e-05 CTTGAGGGCA GAAGGTCA AATTCTTATC chr6:6665810-6665890 17 8.86e-05 ACTAGGCAAG GAAGGTCA AAAGGCCAGC chr18:55578211-55578291 6 1.04e-04 TGAGC AGGGGTCA CCAGCAGAGG chr8:23405466-23405546 15 1.04e-04 TGAGTCATCC AGGGGTCA GCCGGCATGG chr11:65319234-65319314 58 1.04e-04 TATCTGGGTC AGGGGTCA GAGGGTCAGG chr1:154469524-154469604 24 1.04e-04 AGATTTCATT AGGGGTCA CAGTCCAGTG chr2:72025566-72025646 35 1.04e-04 AGGTCAGGCC AGGGGTCA CTGCAGGCTC chr8:123772619-123772699 32 1.04e-04 GTTAGGGTCA AGGGGTCA ACCTGAACTG chr1:228974293-228974373 59 1.04e-04 GAATGACCTC AGGGGTCA GTGACTCATG chr1:29107986-29108066 49 1.04e-04 cgattaggtc aggggtca gattaggtca chr12:54688116-54688196 20 1.19e-04 TCTAGGGTCA AAGGGTCA AGTTCAGATC chr1:161277259-161277339 47 1.34e-04 GTGCTGAGTC ACAGGTCA GAGGCCAATT chr3:186928861-186928941 21 1.34e-04 GACCCTTCCA ACAGGTCA TCTGATTGTT chr4:1595968-1596048 9 1.34e-04 ACCGATTC ACAGGTCA CCAGGTCAGG chr10:126329466-12632954 5 1.66e-04 CCGC AGAGGGCA CGCCCCGCTG chr16:75163824-75163904 18 1.66e-04 aagagggcca agagggca acttgaaaga chr22:20267287-20267367 10 1.95e-04 GAGATCATC AAAGGGCA GATTGTGGGG chr6:158826493-158826573 14 1.95e-04 gtgggggtca aaagggca ccgttgcatt chr21:46738903-46738983 38 1.95e-04 GGCCAAGGTC AAAGGGCA CCGGACGCCG chr1:201139781-201139861 56 1.95e-04 GGGTAAACGC AAAGGGCA AGTGTATTGC chr4:41911343-41911423 37 1.95e-04 ctcccccaac caaggtca agcatcccag chr5:132759654-132759734 53 1.95e-04 GCACGAGGGC AAAGGGCA CCCGCAGACC chr6:105483311-105483391 30 1.95e-04 CCTATTCTTA CAAGGTCA ACATCTGAGG chr13:52736937-52737017 28 1.95e-04 tcccacttcc aaagggca accactttga chr9:116036901-116036981 16 1.95e-04 tgtagaggtt aaagggca caggttttaa chr8:8923468-8923548 24 2.25e-04 TGGAGGGTGA ATAGGTCA CGGCCGCCTT chr7:158806121-158806201 24 2.25e-04 gagtcaaggt tggggtca gggtcaaggt chr11:75133711-75133791 2 2.25e-04 C TGGGGTCA AAGGTGAAGA chr5:78054089-78054169 14 2.25e-04 ACCTTCACCT TGGGGTCA AAAAGATTTG chr11:73730473-73730553 54 2.25e-04 AAATGAGGCA ATAGGTCA GGACCTCTTG chr11:65406015-65406095 59 2.25e-04 GCAGCCGAAA TGGGGTCA TGACCTCCAG chr19:1068262-1068342 40 2.25e-04 TTGACCCCTG TGGGGTCA GGGTGATGGT chr16:11243051-11243131 21 2.25e-04 CTTGACCCCA TGGGGTCA CTGAGGCCCT chr11:66601918-66601998 27 2.25e-04 ACTAAGGATG ATAGGTCA AATTCTTTGA chr5:133625329-133625409 33 2.57e-04 TGTCCTCTGT TAGGGTCA GAGGGTGACT chr5:49729-49809 26 2.57e-04 gggtcagggt tagggtca gggtcagggt chr2:30687602-30687682 22 2.57e-04 TTGCAGTGTC TAGGGTCA GAAGGCCTAT chr20:35502104-35502184 23 2.73e-04 tctctagtcc gagggtca taaGGTTTGA chr11:62235386-62235466 27 2.88e-04 aagccttatc tcaggtca gacacagtgc chr21:45011731-45011811 46 2.88e-04 atctaggtca tcaggtca actgctgtag chr12:57395366-57395446 66 3.04e-04 ATAAATTCCA GCAGGTCA AAGGTGA chr9:78968308-78968388 24 3.04e-04 CAGAGGCCAA GCAGGTCA CTAACATAAA chr13:28982439-28982519 20 3.19e-04 CCCATGACTC TGAGGGCA GTTACTAAGG chr3:39225964-39226044 3 3.66e-04 GA GGAGGGCA CAAATACTCT chr22:20267492-20267572 40 3.82e-04 TGGGATGGAG GAAGGGCA GCCTCTCCGC chr5:149509686-149509766 65 4.29e-04 ATTTGACCCA CGGGGTCA CACGGCGT chr16:2547485-2547565 26 4.76e-04 CCCAGGGGAG CAGGGTCA GGAGTTCATG chr9:130184615-130184695 18 4.76e-04 TTAGGGCAGC CAGGGTCA TGACCCTTTT chr8:125488598-125488678 42 4.76e-04 aaccaggaaa cagggtca tagaggttaa chr19:10197266-10197346 71 4.76e-04 GCGGGGGCTG CAGGGTCA AA chr12:122791127-12279120 12 4.76e-04 CCTGACCACA AAGGGGCA GCAGCTTGCT chr6:15970895-15970975 54 4.91e-04 TTCCACAAGT ATGGGTCA ATCACTTTGA chr11:94877700-94877780 40 4.91e-04 CCTGCTCCAG ATGGGTCA AGTTCCTGCA chr8:11799830-11799910 27 5.23e-04 GGCGTGACCC CCAGGTCA GCTCCTTGTC chr2:201232022-201232102 47 5.23e-04 AAGCCCACTT CCAGGTCA GGGCCATGAC chr1:182328955-182329035 18 6.67e-04 TGTGCTCTGA TAGGGGCA GATGAGAAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:17987733-17987813 1.5e-05 50_[+1]_22 chr19:51041200-51041280 1.5e-05 56_[+1]_16 chrX:13077964-13078044 1.5e-05 56_[+1]_16 chr1:150849371-150849451 1.5e-05 32_[+1]_40 chr3:142569294-142569374 1.5e-05 25_[+1]_47 chr17:6374180-6374260 1.5e-05 56_[+1]_16 chr17:36572800-36572880 1.5e-05 66_[+1]_6 chr6:170125477-170125557 1.5e-05 49_[+1]_23 chr9:37362577-37362657 1.5e-05 33_[+1]_39 chr22:47158720-47158800 1.5e-05 64_[+1]_8 chr1:19835551-19835631 1.5e-05 1_[+1]_71 chr1:45142312-45142392 1.5e-05 68_[+1]_4 chr19:19745179-19745259 1.5e-05 45_[+1]_27 chr10:72453521-72453601 1.5e-05 16_[+1]_56 chr16:90235511-90235591 1.5e-05 7_[+1]_65 chr1:53376399-53376479 1.5e-05 26_[+1]_46 chr4:185736683-185736763 1.5e-05 30_[+1]_42 chr5:150505894-150505974 1.5e-05 36_[+1]_36 chr16:90235311-90235391 1.5e-05 14_[+1]_58 chr19:10416120-10416200 1.5e-05 49_[+1]_23 chr3:52272263-52272343 1.5e-05 41_[+1]_31 chr7:129425030-129425110 2.9e-05 37_[+1]_35 chr17:76407713-76407793 2.9e-05 56_[+1]_16 chr2:64246970-64247050 2.9e-05 45_[+1]_27 chr5:6408849-6408929 2.9e-05 8_[+1]_64 chr19:6568155-6568235 2.9e-05 47_[+1]_25 chr11:64073595-64073675 2.9e-05 32_[+1]_40 chr12:117141187-11714126 2.9e-05 55_[+1]_17 chr7:106456286-106456366 2.9e-05 18_[+1]_54 chrX:118611847-118611927 2.9e-05 7_[+1]_65 chr6:26219234-26219314 2.9e-05 31_[+1]_41 chr19:13283396-13283476 2.9e-05 33_[+1]_39 chr2:102667364-102667444 2.9e-05 41_[+1]_31 chr22:38589769-38589849 2.9e-05 31_[+1]_41 chr19:49136792-49136872 2.9e-05 55_[+1]_17 chr18:12767157-12767237 2.9e-05 23_[+1]_49 chr8:127335201-127335281 2.9e-05 21_[+1]_51 chr21:40376126-40376206 2.9e-05 26_[+1]_46 chr20:35513917-35513997 2.9e-05 23_[+1]_49 chr1:27934003-27934083 2.9e-05 21_[+1]_51 chr16:85884053-85884133 2.9e-05 55_[+1]_17 chr1:2203533-2203613 2.9e-05 19_[+1]_53 chr11:76316950-76317030 2.9e-05 38_[+1]_34 chr5:149501798-149501878 2.9e-05 56_[+1]_16 chr3:49195703-49195783 2.9e-05 47_[+1]_25 chr1:8499644-8499724 2.9e-05 43_[+1]_29 chr17:61920777-61920857 4.4e-05 [+1]_72 chr21:45277523-45277603 4.4e-05 37_[+1]_35 chr1:11812869-11812949 4.4e-05 35_[+1]_37 chr16:87755381-87755461 4.4e-05 56_[+1]_16 chrX:109103050-109103130 4.4e-05 68_[+1]_4 chr21:37582567-37582647 4.4e-05 22_[+1]_50 chr11:62240279-62240359 4.4e-05 62_[+1]_10 chr1:48221223-48221303 4.4e-05 30_[+1]_42 chr10:73930997-73931077 7.4e-05 6_[+1]_66 chr16:56998867-56998947 7.4e-05 61_[+1]_11 chr18:53331262-53331342 7.4e-05 4_[+1]_68 chr17:61920563-61920643 7.4e-05 [+1]_72 chr1:211806929-211807009 7.4e-05 69_[+1]_3 chr19:38687052-38687132 7.4e-05 30_[+1]_42 chr2:68514879-68514959 7.4e-05 10_[+1]_62 chr15:29360322-29360402 7.4e-05 17_[+1]_55 chr17:57635538-57635618 7.4e-05 11_[+1]_61 chr1:176660972-176661052 7.4e-05 48_[+1]_24 chr11:15601733-15601813 7.4e-05 13_[+1]_59 chr9:95871634-95871714 7.4e-05 32_[+1]_40 chr15:58574627-58574707 7.4e-05 50_[+1]_22 chr12:104351283-10435136 7.4e-05 28_[+1]_44 chr1:200398490-200398570 7.4e-05 29_[+1]_43 chr1:23428157-23428237 7.4e-05 29_[+1]_43 chr1:61557383-61557463 7.4e-05 38_[+1]_34 chr7:2885693-2885773 7.4e-05 6_[+1]_66 chr21:36842885-36842965 7.4e-05 6_[+1]_66 chr17:7370339-7370419 8.9e-05 32_[+1]_40 chr12:122155071-12215515 8.9e-05 7_[+1]_65 chr2:99029522-99029602 8.9e-05 33_[+1]_39 chr6:6665810-6665890 8.9e-05 16_[+1]_56 chr18:55578211-55578291 0.0001 5_[+1]_67 chr8:23405466-23405546 0.0001 14_[+1]_58 chr11:65319234-65319314 0.0001 57_[+1]_15 chr1:154469524-154469604 0.0001 23_[+1]_49 chr2:72025566-72025646 0.0001 34_[+1]_38 chr8:123772619-123772699 0.0001 31_[+1]_41 chr1:228974293-228974373 0.0001 58_[+1]_14 chr1:29107986-29108066 0.0001 48_[+1]_24 chr12:54688116-54688196 0.00012 19_[+1]_53 chr1:161277259-161277339 0.00013 46_[+1]_26 chr3:186928861-186928941 0.00013 20_[+1]_52 chr4:1595968-1596048 0.00013 8_[+1]_64 chr10:126329466-12632954 0.00017 4_[+1]_68 chr16:75163824-75163904 0.00017 17_[+1]_55 chr22:20267287-20267367 0.0002 9_[+1]_63 chr6:158826493-158826573 0.0002 13_[+1]_59 chr21:46738903-46738983 0.0002 37_[+1]_35 chr1:201139781-201139861 0.0002 55_[+1]_17 chr4:41911343-41911423 0.0002 36_[+1]_36 chr5:132759654-132759734 0.0002 52_[+1]_20 chr6:105483311-105483391 0.0002 29_[+1]_43 chr13:52736937-52737017 0.0002 27_[+1]_45 chr9:116036901-116036981 0.0002 15_[+1]_57 chr8:8923468-8923548 0.00023 23_[+1]_49 chr7:158806121-158806201 0.00023 23_[+1]_49 chr11:75133711-75133791 0.00023 1_[+1]_71 chr5:78054089-78054169 0.00023 13_[+1]_59 chr11:73730473-73730553 0.00023 53_[+1]_19 chr11:65406015-65406095 0.00023 58_[+1]_14 chr19:1068262-1068342 0.00023 39_[+1]_33 chr16:11243051-11243131 0.00023 20_[+1]_52 chr11:66601918-66601998 0.00023 26_[+1]_46 chr5:133625329-133625409 0.00026 32_[+1]_40 chr5:49729-49809 0.00026 25_[+1]_47 chr2:30687602-30687682 0.00026 21_[+1]_51 chr20:35502104-35502184 0.00027 22_[+1]_50 chr11:62235386-62235466 0.00029 26_[+1]_46 chr21:45011731-45011811 0.00029 45_[+1]_27 chr12:57395366-57395446 0.0003 65_[+1]_7 chr9:78968308-78968388 0.0003 23_[+1]_49 chr13:28982439-28982519 0.00032 19_[+1]_53 chr3:39225964-39226044 0.00037 2_[+1]_70 chr22:20267492-20267572 0.00038 39_[+1]_33 chr5:149509686-149509766 0.00043 64_[+1]_8 chr16:2547485-2547565 0.00048 25_[+1]_47 chr9:130184615-130184695 0.00048 17_[+1]_55 chr8:125488598-125488678 0.00048 41_[+1]_31 chr19:10197266-10197346 0.00048 70_[+1]_2 chr12:122791127-12279120 0.00048 11_[+1]_61 chr6:15970895-15970975 0.00049 53_[+1]_19 chr11:94877700-94877780 0.00049 39_[+1]_33 chr8:11799830-11799910 0.00052 26_[+1]_46 chr2:201232022-201232102 0.00052 46_[+1]_26 chr1:182328955-182329035 0.00067 17_[+1]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ARAGGTCA width=8 seqs=131 chr8:17987733-17987813 ( 51) AGAGGTCA 1 chr19:51041200-51041280 ( 57) AGAGGTCA 1 chrX:13077964-13078044 ( 57) AGAGGTCA 1 chr1:150849371-150849451 ( 33) AGAGGTCA 1 chr3:142569294-142569374 ( 26) AGAGGTCA 1 chr17:6374180-6374260 ( 57) AGAGGTCA 1 chr17:36572800-36572880 ( 67) AGAGGTCA 1 chr6:170125477-170125557 ( 50) AGAGGTCA 1 chr9:37362577-37362657 ( 34) AGAGGTCA 1 chr22:47158720-47158800 ( 65) AGAGGTCA 1 chr1:19835551-19835631 ( 2) AGAGGTCA 1 chr1:45142312-45142392 ( 69) AGAGGTCA 1 chr19:19745179-19745259 ( 46) AGAGGTCA 1 chr10:72453521-72453601 ( 17) AGAGGTCA 1 chr16:90235511-90235591 ( 8) AGAGGTCA 1 chr1:53376399-53376479 ( 27) AGAGGTCA 1 chr4:185736683-185736763 ( 31) AGAGGTCA 1 chr5:150505894-150505974 ( 37) AGAGGTCA 1 chr16:90235311-90235391 ( 15) AGAGGTCA 1 chr19:10416120-10416200 ( 50) AGAGGTCA 1 chr3:52272263-52272343 ( 42) AGAGGTCA 1 chr7:129425030-129425110 ( 38) AAAGGTCA 1 chr17:76407713-76407793 ( 57) AAAGGTCA 1 chr2:64246970-64247050 ( 46) AAAGGTCA 1 chr5:6408849-6408929 ( 9) AAAGGTCA 1 chr19:6568155-6568235 ( 48) AAAGGTCA 1 chr11:64073595-64073675 ( 33) AAAGGTCA 1 chr12:117141187-11714126 ( 56) AAAGGTCA 1 chr7:106456286-106456366 ( 19) AAAGGTCA 1 chrX:118611847-118611927 ( 8) AAAGGTCA 1 chr6:26219234-26219314 ( 32) AAAGGTCA 1 chr19:13283396-13283476 ( 34) AAAGGTCA 1 chr2:102667364-102667444 ( 42) AAAGGTCA 1 chr22:38589769-38589849 ( 32) AAAGGTCA 1 chr19:49136792-49136872 ( 56) AAAGGTCA 1 chr18:12767157-12767237 ( 24) AAAGGTCA 1 chr8:127335201-127335281 ( 22) AAAGGTCA 1 chr21:40376126-40376206 ( 27) AAAGGTCA 1 chr20:35513917-35513997 ( 24) AAAGGTCA 1 chr1:27934003-27934083 ( 22) AAAGGTCA 1 chr16:85884053-85884133 ( 56) AAAGGTCA 1 chr1:2203533-2203613 ( 20) AAAGGTCA 1 chr11:76316950-76317030 ( 39) AAAGGTCA 1 chr5:149501798-149501878 ( 57) AAAGGTCA 1 chr3:49195703-49195783 ( 48) AAAGGTCA 1 chr1:8499644-8499724 ( 44) AAAGGTCA 1 chr17:61920777-61920857 ( 1) TGAGGTCA 1 chr21:45277523-45277603 ( 38) TGAGGTCA 1 chr1:11812869-11812949 ( 36) TGAGGTCA 1 chr16:87755381-87755461 ( 57) TGAGGTCA 1 chrX:109103050-109103130 ( 69) TGAGGTCA 1 chr21:37582567-37582647 ( 23) TGAGGTCA 1 chr11:62240279-62240359 ( 63) TGAGGTCA 1 chr1:48221223-48221303 ( 31) TGAGGTCA 1 chr10:73930997-73931077 ( 7) GGAGGTCA 1 chr16:56998867-56998947 ( 62) GGAGGTCA 1 chr18:53331262-53331342 ( 5) GGAGGTCA 1 chr17:61920563-61920643 ( 1) TAAGGTCA 1 chr1:211806929-211807009 ( 70) GGAGGTCA 1 chr19:38687052-38687132 ( 31) GGAGGTCA 1 chr2:68514879-68514959 ( 11) GGAGGTCA 1 chr15:29360322-29360402 ( 18) GGAGGTCA 1 chr17:57635538-57635618 ( 12) TAAGGTCA 1 chr1:176660972-176661052 ( 49) TAAGGTCA 1 chr11:15601733-15601813 ( 14) TAAGGTCA 1 chr9:95871634-95871714 ( 33) GGAGGTCA 1 chr15:58574627-58574707 ( 51) GGAGGTCA 1 chr12:104351283-10435136 ( 29) GGAGGTCA 1 chr1:200398490-200398570 ( 30) GGAGGTCA 1 chr1:23428157-23428237 ( 30) GGAGGTCA 1 chr1:61557383-61557463 ( 39) TAAGGTCA 1 chr7:2885693-2885773 ( 7) GGAGGTCA 1 chr21:36842885-36842965 ( 7) GGAGGTCA 1 chr17:7370339-7370419 ( 33) GAAGGTCA 1 chr12:122155071-12215515 ( 8) GAAGGTCA 1 chr2:99029522-99029602 ( 34) GAAGGTCA 1 chr6:6665810-6665890 ( 17) GAAGGTCA 1 chr18:55578211-55578291 ( 6) AGGGGTCA 1 chr8:23405466-23405546 ( 15) AGGGGTCA 1 chr11:65319234-65319314 ( 58) AGGGGTCA 1 chr1:154469524-154469604 ( 24) AGGGGTCA 1 chr2:72025566-72025646 ( 35) AGGGGTCA 1 chr8:123772619-123772699 ( 32) AGGGGTCA 1 chr1:228974293-228974373 ( 59) AGGGGTCA 1 chr1:29107986-29108066 ( 49) AGGGGTCA 1 chr12:54688116-54688196 ( 20) AAGGGTCA 1 chr1:161277259-161277339 ( 47) ACAGGTCA 1 chr3:186928861-186928941 ( 21) ACAGGTCA 1 chr4:1595968-1596048 ( 9) ACAGGTCA 1 chr10:126329466-12632954 ( 5) AGAGGGCA 1 chr16:75163824-75163904 ( 18) AGAGGGCA 1 chr22:20267287-20267367 ( 10) AAAGGGCA 1 chr6:158826493-158826573 ( 14) AAAGGGCA 1 chr21:46738903-46738983 ( 38) AAAGGGCA 1 chr1:201139781-201139861 ( 56) AAAGGGCA 1 chr4:41911343-41911423 ( 37) CAAGGTCA 1 chr5:132759654-132759734 ( 53) AAAGGGCA 1 chr6:105483311-105483391 ( 30) CAAGGTCA 1 chr13:52736937-52737017 ( 28) AAAGGGCA 1 chr9:116036901-116036981 ( 16) AAAGGGCA 1 chr8:8923468-8923548 ( 24) ATAGGTCA 1 chr7:158806121-158806201 ( 24) TGGGGTCA 1 chr11:75133711-75133791 ( 2) TGGGGTCA 1 chr5:78054089-78054169 ( 14) TGGGGTCA 1 chr11:73730473-73730553 ( 54) ATAGGTCA 1 chr11:65406015-65406095 ( 59) TGGGGTCA 1 chr19:1068262-1068342 ( 40) TGGGGTCA 1 chr16:11243051-11243131 ( 21) TGGGGTCA 1 chr11:66601918-66601998 ( 27) ATAGGTCA 1 chr5:133625329-133625409 ( 33) TAGGGTCA 1 chr5:49729-49809 ( 26) TAGGGTCA 1 chr2:30687602-30687682 ( 22) TAGGGTCA 1 chr20:35502104-35502184 ( 23) GAGGGTCA 1 chr11:62235386-62235466 ( 27) TCAGGTCA 1 chr21:45011731-45011811 ( 46) TCAGGTCA 1 chr12:57395366-57395446 ( 66) GCAGGTCA 1 chr9:78968308-78968388 ( 24) GCAGGTCA 1 chr13:28982439-28982519 ( 20) TGAGGGCA 1 chr3:39225964-39226044 ( 3) GGAGGGCA 1 chr22:20267492-20267572 ( 40) GAAGGGCA 1 chr5:149509686-149509766 ( 65) CGGGGTCA 1 chr16:2547485-2547565 ( 26) CAGGGTCA 1 chr9:130184615-130184695 ( 18) CAGGGTCA 1 chr8:125488598-125488678 ( 42) CAGGGTCA 1 chr19:10197266-10197346 ( 71) CAGGGTCA 1 chr12:122791127-12279120 ( 12) AAGGGGCA 1 chr6:15970895-15970975 ( 54) ATGGGTCA 1 chr11:94877700-94877780 ( 40) ATGGGTCA 1 chr8:11799830-11799910 ( 27) CCAGGTCA 1 chr2:201232022-201232102 ( 47) CCAGGTCA 1 chr1:182328955-182329035 ( 18) TAGGGGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.12623 E= 1.3e-120 120 -191 -54 -30 79 -191 89 -268 170 -1368 -25 -1368 -1368 -1368 197 -1368 -1368 -1368 197 -1368 -1368 -1368 -125 187 -1368 195 -1368 -1368 205 -1368 -1368 -1368 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 131 E= 1.3e-120 0.557252 0.068702 0.175573 0.198473 0.419847 0.068702 0.473282 0.038168 0.786260 0.000000 0.213740 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.106870 0.893130 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ARAGGTCA MEME-1 regular expression -------------------------------------------------------------------------------- A[GA][AG]GGTCA -------------------------------------------------------------------------------- Time 4.77 secs. ******************************************************************************** ******************************************************************************** MOTIF TGACCTYT MEME-2 width = 8 sites = 133 llr = 1056 E-value = 4.3e-116 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::9::::1 pos.-specific C ::1aa241 probability G :a::::11 matrix T a::::857 bits 2.0 * 1.8 * ** 1.6 ***** 1.4 ****** Relative 1.2 ****** Entropy 1.0 ****** (11.5 bits) 0.8 ****** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACCTTT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:27180422-27180502 23 1.47e-05 ccaccccact tgaccttt ggctcttcat chr7:132521673-132521753 37 1.47e-05 AATGACCCAC TGACCTTT CCAGTTTTAT chr6:112365090-112365170 37 1.47e-05 TGCAGAAGGG TGACCTTT AGCCTTCTGC chr16:79931670-79931750 24 1.47e-05 CATCGTGGTT TGACCTTT AAGCTCTGGG chr7:107204940-107205020 62 1.47e-05 ATGAGACCTT TGACCTTT TGCCTTTTCT chr16:79985437-79985517 31 1.47e-05 AATCTTAATC TGACCTTT CCTTCTTCTC chr1:45142312-45142392 30 1.47e-05 aagttgttgg tgaccttt acaagtgcag chr17:37027845-37027925 56 1.47e-05 GCTTCCTCAG TGACCTTT GGCCTCTGAG chr19:8420647-8420727 32 1.47e-05 GCTCTTGGGC TGACCTTT CTTGGTGACC chr12:65587062-65587142 24 1.47e-05 gtgtgcggtt tgaccttt tgacttgggg chr3:46458053-46458133 69 1.47e-05 gtgcgtggtt tgaccttt tgac chr7:121035005-121035085 47 1.47e-05 CTATCAGCAT TGACCTTT Actctcggga chr16:56390026-56390106 35 1.47e-05 CCTGGTAGCA TGACCTTT TGGCCTTTGT chr10:32241069-32241149 31 1.47e-05 gtgtgcagtt tgaccttt tgacttgggg chr17:8080525-8080605 45 1.47e-05 GGCGACCTCA TGACCTTT GGGCCTCAGC chr2:9843956-9844036 27 1.47e-05 tgctagcctt tgaccttt ggaggcttgg chr18:10081623-10081703 25 1.47e-05 GCAAGCATGT TGACCTTT GACAGCTGGC chr16:86962282-86962362 52 1.47e-05 ttgaaccaaa tgaccttt tgacctcttg chr1:27675491-27675571 18 1.47e-05 GACCCCAATA TGACCTTT GACCTCTTCC chr13:52736937-52737017 43 1.47e-05 gcaaccactt tgaccttt gtggttttaa chr1:23428157-23428237 46 1.47e-05 CACTTATCTC TGACCTTT TGGCCCTAAG chr5:149730175-149730255 51 1.47e-05 CTGGTGACCT TGACCTTT TGAGAGAACT chr1:61557383-61557463 68 1.47e-05 ACCAGGCATT TGACCTTT TAGAT chr9:75763499-75763579 42 1.47e-05 AAGCAGAGTT TGACCTTT TGACCTTAAC chr16:75163824-75163904 49 1.47e-05 gtgtgtggtt tgaccttt tgacttgtgg chr19:49713401-49713481 39 1.47e-05 TGACCTCAAG TGACCTTT GACCTCTGGC chr12:122791127-12279120 50 1.47e-05 TCAGAGGCCA TGACCTTT AACATGGGCC chr1:46087992-46088072 59 3.02e-05 CTGTCACCTT TGACCTCT GGTGACTGGC chr12:31910160-31910240 55 3.02e-05 acaaatcctg tgacctct ggccacagga chr1:236696292-236696372 53 3.02e-05 GATGACCTCC TGACCTCT GGCTTATTTC chr15:51673523-51673603 42 3.02e-05 TGATTTCCTC TGACCTCT GTTAACTGGC chr9:37362577-37362657 43 3.02e-05 GAGAGGTCAC TGACCTCT TAAGCCTGTG chr4:154331156-154331236 53 3.02e-05 acttgctgtg tgacctct tgaccctctc chr20:36825075-36825155 38 3.02e-05 GGTCAGACTG TGACCTCT GGGGCTTATC chr17:54987715-54987795 28 3.02e-05 GTTTCAAACT TGACCTCT GTGACACTGC chr13:114035512-11403559 26 3.02e-05 accacaaacc tgacctct ggtgaccaca chr19:1068262-1068342 17 3.02e-05 CTCGGCCCTG TGACCTCT GGCCTTTGAC chr17:7370339-7370419 49 3.02e-05 CAAGGGGTCA TGACCTCT GAAGTCACAG chr19:50919325-50919405 71 3.02e-05 CTTAGCCCCA TGACCTCT GA chr5:150505894-150505974 65 3.02e-05 GGGGAAGGTC TGACCTCT ACTCGGGC chr19:46914875-46914955 62 3.02e-05 CTGTGCCCTG TGACCTCT GGTCAGCTGG chr1:136680-136760 25 3.02e-05 GGGCTCAGGC TGACCTCT GTCCGCGTGG chr17:55536810-55536890 23 3.02e-05 CCTGAACTTT TGACCTCT GGCTCCAGGT chr1:136884-136964 65 3.02e-05 GGGCTCGGGC TGACCTCT CTCAGCGT chr12:104351283-10435136 45 3.02e-05 CACCCTCCTG TGACCTCT TAAGAGTGAA chr16:77265085-77265165 61 3.02e-05 TAGCCTTCCT TGACCTCT CTGAGAGCAA chr6:149450708-149450788 68 3.02e-05 ACCTAACATC TGACCTCT GACCT chr3:39225964-39226044 66 3.02e-05 TGAGGCTGTG TGACCTCT GGCCTCT chr3:127314338-127314418 55 3.02e-05 CCTTATCAGA TGACCTCT GGGCAGCCAG chr19:51294414-51294494 51 3.02e-05 CTTGCCCTCT TGACCTCT AACCTTTAAC chr17:26075268-26075348 50 3.02e-05 GGATGCCCTT TGACCTCT GCTTCCTGCT chr11:66601918-66601998 42 3.02e-05 TCAAATTCTT TGACCTCT GGGCCATTCT chr4:84176876-84176956 58 3.02e-05 CAATGGGACA TGACCTCT GATCCCAATA chr1:15790960-15791040 19 4.48e-05 TGAGTAATAA TGACCTTA TGACCATAAT chr10:32790981-32791061 49 4.48e-05 tatcccaggt tgacctta gactgctgtg chr20:42087835-42087915 66 4.48e-05 ACCCTTTGGC TGACCTTA CCGGAAG chr5:78211113-78211193 28 4.48e-05 TCATCAGTCA TGACCTTA GGACCTTTCT chr19:51041200-51041280 47 9.14e-05 ATGTCCCAGT TGACCTCA AGAGAGGTCA chr9:35731547-35731627 22 9.14e-05 TGTTGTTTGT TGACCCTT AACCTGACCC chr3:45506086-45506166 42 9.14e-05 CTCTGCCCTC TGACCTCA AGAAAGCACC chr16:69787-69867 71 9.14e-05 accctgaccc tgaccctt ga chr21:47438688-47438768 24 9.14e-05 gatcagtgcc tgaccctt atgacctcat chr2:27229506-27229586 23 9.14e-05 cttgaactcc tgacctca agcagtcctc chr6:151695336-151695416 53 9.14e-05 CCATCACCCC TGACCCTT AACACTTACG chr1:92783528-92783608 53 9.14e-05 GTCTGCTTTG TGACCTCA TTTTGACCTC chr19:13162543-13162623 10 9.14e-05 TTCAGGTCT TGACCTCA AGAGCCTTCC chr3:186928861-186928941 10 9.14e-05 TCCTAACCC TGACCCTT CCAACAGGTC chr1:154469524-154469604 40 9.14e-05 CACAGTCCAG TGACCTTC AGGGTCACAG chr1:36936012-36936092 1 9.14e-05 . tgacctca gatgatccgc chr9:130184615-130184695 26 9.14e-05 GCCAGGGTCA TGACCCTT TTGGCTGCTG chr22:19592473-19592553 31 9.14e-05 TTTGACCCTC TGACCTCA TTGCCTCTCT chr17:71285140-71285220 6 9.14e-05 GAAAG TGACCTTC CCCTAACTCT chr16:29361495-29361575 56 9.14e-05 cgttgtttgc tgacctcA GCTTCTGGAG chr15:77359785-77359865 36 9.14e-05 AATTAAACTT TGACCCTT GTTAACAATC chr1:213140125-213140205 55 9.14e-05 agtgaccttc tgacctca gcctcctgag chr1:8499644-8499724 53 9.14e-05 GAAAGGTCAA TGACCCTT GGGAACCACA chr16:87755381-87755461 32 1.24e-04 CGTTATCTCC TGACCTCC AGGCGCACAA chr19:6568155-6568235 6 1.24e-04 attgc tgacctcc tgagtagaga chr6:36650151-36650231 15 1.24e-04 CTGTACTGGG TGACCCCT TTATGGGGCA chr11:65406015-65406095 67 1.24e-04 AATGGGGTCA TGACCTCC AGATGT chr1:28481506-28481586 36 1.24e-04 gcccttgccc tgacctcc agctgccact chr19:59069477-59069557 22 1.24e-04 CCTCAAGACT TGACCTCC GACCCCCCCC chr3:141428126-141428206 57 1.24e-04 actgcagcct tgacctcc tggcctcaag chr17:65106932-65107012 30 1.24e-04 agaaggttgc tgacccct gGCCTAGAGT chr1:231330875-231330955 72 1.55e-04 ctgccaaatg tgacctgt a chr1:203725737-203725817 48 1.55e-04 aaggcctttg tgacctgt atcttgtgcc chr10:72453521-72453601 25 1.55e-04 GCAGAGGTCA TGACCTTG GGAACTGTGG chr17:6325374-6325454 27 1.55e-04 TCAGCTTGCC TGACCTTG TGACCTGCAG chr11:64027144-64027224 26 1.55e-04 GACTTACCCC TGACCTGT AACCTCTCTA chr1:176660972-176661052 57 1.55e-04 TTTAAGGTCA TGACCTTG CTTTAGATAT chr9:95871634-95871714 61 1.55e-04 GCCTGTCCAC TGACCTTG AGAACCACAC chr7:116250342-116250422 13 1.55e-04 tactgggtca tgacctgt ggtttaaaaa chr1:246859892-246859972 39 1.55e-04 GCCTCACCTT TGACCTTG TCTCAGCAGC chr1:95273796-95273876 18 1.55e-04 GGCTGCGGTT TGACCTGT GGGCCCCTGC chr2:30687602-30687682 39 1.55e-04 AGAAGGCCTA TGACCTTG TCATTGTAAA chr6:15970895-15970975 69 1.86e-04 TCAATCACTT TGACCTAT TGAC chr2:201232022-201232102 61 1.86e-04 GTCAGGGCCA TGACCTCG TGTGGACAGA chr6:105483311-105483391 8 1.86e-04 TCTATTC TGACCTAT AACCCCTATT chr1:200398490-200398570 47 1.86e-04 aaggttgcag tgacctat gattatgtca chr7:2885693-2885773 24 1.86e-04 aagggtgcag tgacctat gatcgtgcca chr20:44399901-44399981 16 2.02e-04 TCTTTTAGAA TGCCCTTT TGCCCTTTTG chr8:100649729-100649809 40 2.32e-04 ttctgttcag taaccttt gtgacctgag chr2:175901424-175901504 43 2.32e-04 GAGTGAAACT TAACCTTT GACTCCTGTT chr1:2203533-2203613 72 2.32e-04 CACGACCTCT TGCCCTCT G chr10:97832593-97832673 37 2.32e-04 GTCTGGCAGA TAACCTTT TCACCTCTGT chr6:105402494-105402574 67 2.47e-04 AATGAGTCGA TAACCTCT GACACC chr3:16588013-16588093 28 2.47e-04 ataagtcgct taacctct acccgaacct chr8:20061378-20061458 1 2.62e-04 . TGGCCTTT CTTTCCATTG chr7:99867451-99867531 62 2.62e-04 GAAACAGAGA TGGCCTTT GGCCTCTGAG chr2:29229745-29229825 30 2.62e-04 CCCAGACCTG TGGCCTTT CCTCTTATCT chr1:211869049-211869129 24 3.27e-04 GCTGCCCCCG TGACCCTC CTCCAGCTGT chr20:49039765-49039845 12 3.27e-04 TGAAGAACTT TGACCCCA AATCCCTGGG chr10:126329466-12632954 21 3.27e-04 CACGCCCCGC TGACCCCA CACTAGGAAG chr16:11243051-11243131 13 3.27e-04 CAGCGGGACT TGACCCCA TGGGGTCACT chr16:85884053-85884133 34 3.27e-04 ggcttagcag tgaccctc cagaagctga chr22:18260168-18260248 54 3.45e-04 gttgaagccc tgaccccc aggacctcag chr11:94877700-94877780 26 4.37e-04 GATTCCAATC TGACCCTG CTCCAGATGG chr5:150632168-150632248 34 4.37e-04 GCAGAGAGTC TGACATTT TTGTCCGGAA chr12:92172815-92172895 19 5.00e-04 GTAATGGCTT TGACCCAT TGCCCTGCTG chr6:99873759-99873839 56 5.00e-04 AGACCTTAGC TGACCCCG CAGCTGTCTT chr16:30198621-30198701 55 5.00e-04 TACGGGTGCC TGACCTAC CACCTCCCTT chr17:57635538-57635618 40 5.00e-04 aaaccgcaaa tgacatct ctgaccggaa chr11:73730473-73730553 62 5.47e-04 CAATAGGTCA GGACCTCT TGCCCCAAGA chr4:185736683-185736763 56 5.47e-04 CACATATCAG TGACCTGG ATAAGAAGGT chr11:76316950-76317030 66 5.47e-04 ccaggcactt ggacctct tgagccc chr12:131925526-13192560 52 5.78e-04 ACCCTGGCCC TGCCCTTA TGGTTTGACC chr2:64246970-64247050 30 6.42e-04 CCCTAGTAAA TGCCCTTC CAAAGGTTAA chr8:8923468-8923548 51 7.35e-04 TTTTTTTCTT TGACTTTT CTGCTGCCTG chr10:82026397-82026477 3 7.35e-04 CT TGCCCTCC TGGGGTTCTG chr1:48221223-48221303 54 7.35e-04 TGAGTAGCAC TGCCCCCT GGTGGCAGCT chr15:58574627-58574707 1 7.81e-04 . taacctcc aactttataa chr7:101331553-101331633 65 8.92e-04 GTTACAGCCT TGCCCTCG CCTCCTGC chr11:15601733-15601813 40 1.04e-03 ctcaattagt tggcctgt gtgaacctga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:27180422-27180502 1.5e-05 22_[+2]_50 chr7:132521673-132521753 1.5e-05 36_[+2]_36 chr6:112365090-112365170 1.5e-05 36_[+2]_36 chr16:79931670-79931750 1.5e-05 23_[+2]_49 chr7:107204940-107205020 1.5e-05 61_[+2]_11 chr16:79985437-79985517 1.5e-05 30_[+2]_42 chr1:45142312-45142392 1.5e-05 29_[+2]_43 chr17:37027845-37027925 1.5e-05 55_[+2]_17 chr19:8420647-8420727 1.5e-05 31_[+2]_41 chr12:65587062-65587142 1.5e-05 23_[+2]_49 chr3:46458053-46458133 1.5e-05 68_[+2]_4 chr7:121035005-121035085 1.5e-05 46_[+2]_26 chr16:56390026-56390106 1.5e-05 34_[+2]_38 chr10:32241069-32241149 1.5e-05 30_[+2]_42 chr17:8080525-8080605 1.5e-05 44_[+2]_28 chr2:9843956-9844036 1.5e-05 26_[+2]_46 chr18:10081623-10081703 1.5e-05 24_[+2]_48 chr16:86962282-86962362 1.5e-05 51_[+2]_21 chr1:27675491-27675571 1.5e-05 17_[+2]_55 chr13:52736937-52737017 1.5e-05 42_[+2]_30 chr1:23428157-23428237 1.5e-05 45_[+2]_27 chr5:149730175-149730255 1.5e-05 50_[+2]_22 chr1:61557383-61557463 1.5e-05 67_[+2]_5 chr9:75763499-75763579 1.5e-05 41_[+2]_31 chr16:75163824-75163904 1.5e-05 48_[+2]_24 chr19:49713401-49713481 1.5e-05 38_[+2]_34 chr12:122791127-12279120 1.5e-05 49_[+2]_23 chr1:46087992-46088072 3e-05 58_[+2]_14 chr12:31910160-31910240 3e-05 54_[+2]_18 chr1:236696292-236696372 3e-05 52_[+2]_20 chr15:51673523-51673603 3e-05 41_[+2]_31 chr9:37362577-37362657 3e-05 42_[+2]_30 chr4:154331156-154331236 3e-05 52_[+2]_20 chr20:36825075-36825155 3e-05 37_[+2]_35 chr17:54987715-54987795 3e-05 27_[+2]_45 chr13:114035512-11403559 3e-05 25_[+2]_47 chr19:1068262-1068342 3e-05 16_[+2]_56 chr17:7370339-7370419 3e-05 48_[+2]_24 chr19:50919325-50919405 3e-05 70_[+2]_2 chr5:150505894-150505974 3e-05 64_[+2]_8 chr19:46914875-46914955 3e-05 61_[+2]_11 chr1:136680-136760 3e-05 24_[+2]_48 chr17:55536810-55536890 3e-05 22_[+2]_50 chr1:136884-136964 3e-05 64_[+2]_8 chr12:104351283-10435136 3e-05 44_[+2]_28 chr16:77265085-77265165 3e-05 60_[+2]_12 chr6:149450708-149450788 3e-05 67_[+2]_5 chr3:39225964-39226044 3e-05 65_[+2]_7 chr3:127314338-127314418 3e-05 54_[+2]_18 chr19:51294414-51294494 3e-05 50_[+2]_22 chr17:26075268-26075348 3e-05 49_[+2]_23 chr11:66601918-66601998 3e-05 41_[+2]_31 chr4:84176876-84176956 3e-05 57_[+2]_15 chr1:15790960-15791040 4.5e-05 18_[+2]_54 chr10:32790981-32791061 4.5e-05 48_[+2]_24 chr20:42087835-42087915 4.5e-05 65_[+2]_7 chr5:78211113-78211193 4.5e-05 27_[+2]_45 chr19:51041200-51041280 9.1e-05 46_[+2]_26 chr9:35731547-35731627 9.1e-05 21_[+2]_51 chr3:45506086-45506166 9.1e-05 41_[+2]_31 chr16:69787-69867 9.1e-05 70_[+2]_2 chr21:47438688-47438768 9.1e-05 23_[+2]_49 chr2:27229506-27229586 9.1e-05 22_[+2]_50 chr6:151695336-151695416 9.1e-05 52_[+2]_20 chr1:92783528-92783608 9.1e-05 52_[+2]_20 chr19:13162543-13162623 9.1e-05 9_[+2]_63 chr3:186928861-186928941 9.1e-05 9_[+2]_63 chr1:154469524-154469604 9.1e-05 39_[+2]_33 chr1:36936012-36936092 9.1e-05 [+2]_72 chr9:130184615-130184695 9.1e-05 25_[+2]_47 chr22:19592473-19592553 9.1e-05 30_[+2]_42 chr17:71285140-71285220 9.1e-05 5_[+2]_67 chr16:29361495-29361575 9.1e-05 55_[+2]_17 chr15:77359785-77359865 9.1e-05 35_[+2]_37 chr1:213140125-213140205 9.1e-05 54_[+2]_18 chr1:8499644-8499724 9.1e-05 52_[+2]_20 chr16:87755381-87755461 0.00012 31_[+2]_41 chr19:6568155-6568235 0.00012 5_[+2]_67 chr6:36650151-36650231 0.00012 14_[+2]_58 chr11:65406015-65406095 0.00012 66_[+2]_6 chr1:28481506-28481586 0.00012 35_[+2]_37 chr19:59069477-59069557 0.00012 21_[+2]_51 chr3:141428126-141428206 0.00012 56_[+2]_16 chr17:65106932-65107012 0.00012 29_[+2]_43 chr1:231330875-231330955 0.00016 71_[+2]_1 chr1:203725737-203725817 0.00016 47_[+2]_25 chr10:72453521-72453601 0.00016 24_[+2]_48 chr17:6325374-6325454 0.00016 26_[+2]_46 chr11:64027144-64027224 0.00016 25_[+2]_47 chr1:176660972-176661052 0.00016 56_[+2]_16 chr9:95871634-95871714 0.00016 60_[+2]_12 chr7:116250342-116250422 0.00016 12_[+2]_60 chr1:246859892-246859972 0.00016 38_[+2]_34 chr1:95273796-95273876 0.00016 17_[+2]_55 chr2:30687602-30687682 0.00016 38_[+2]_34 chr6:15970895-15970975 0.00019 68_[+2]_4 chr2:201232022-201232102 0.00019 60_[+2]_12 chr6:105483311-105483391 0.00019 7_[+2]_65 chr1:200398490-200398570 0.00019 46_[+2]_26 chr7:2885693-2885773 0.00019 23_[+2]_49 chr20:44399901-44399981 0.0002 15_[+2]_57 chr8:100649729-100649809 0.00023 39_[+2]_33 chr2:175901424-175901504 0.00023 42_[+2]_30 chr1:2203533-2203613 0.00023 71_[+2]_1 chr10:97832593-97832673 0.00023 36_[+2]_36 chr6:105402494-105402574 0.00025 66_[+2]_6 chr3:16588013-16588093 0.00025 27_[+2]_45 chr8:20061378-20061458 0.00026 [+2]_72 chr7:99867451-99867531 0.00026 61_[+2]_11 chr2:29229745-29229825 0.00026 29_[+2]_43 chr1:211869049-211869129 0.00033 23_[+2]_49 chr20:49039765-49039845 0.00033 11_[+2]_61 chr10:126329466-12632954 0.00033 20_[+2]_52 chr16:11243051-11243131 0.00033 12_[+2]_60 chr16:85884053-85884133 0.00033 33_[+2]_39 chr22:18260168-18260248 0.00034 53_[+2]_19 chr11:94877700-94877780 0.00044 25_[+2]_47 chr5:150632168-150632248 0.00044 33_[+2]_39 chr12:92172815-92172895 0.0005 18_[+2]_54 chr6:99873759-99873839 0.0005 55_[+2]_17 chr16:30198621-30198701 0.0005 54_[+2]_18 chr17:57635538-57635618 0.0005 39_[+2]_33 chr11:73730473-73730553 0.00055 61_[+2]_11 chr4:185736683-185736763 0.00055 55_[+2]_17 chr11:76316950-76317030 0.00055 65_[+2]_7 chr12:131925526-13192560 0.00058 51_[+2]_21 chr2:64246970-64247050 0.00064 29_[+2]_43 chr8:8923468-8923548 0.00074 50_[+2]_22 chr10:82026397-82026477 0.00074 2_[+2]_70 chr1:48221223-48221303 0.00074 53_[+2]_19 chr15:58574627-58574707 0.00078 [+2]_72 chr7:101331553-101331633 0.00089 64_[+2]_8 chr11:15601733-15601813 0.001 39_[+2]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACCTYT width=8 seqs=133 chr8:27180422-27180502 ( 23) TGACCTTT 1 chr7:132521673-132521753 ( 37) TGACCTTT 1 chr6:112365090-112365170 ( 37) TGACCTTT 1 chr16:79931670-79931750 ( 24) TGACCTTT 1 chr7:107204940-107205020 ( 62) TGACCTTT 1 chr16:79985437-79985517 ( 31) TGACCTTT 1 chr1:45142312-45142392 ( 30) TGACCTTT 1 chr17:37027845-37027925 ( 56) TGACCTTT 1 chr19:8420647-8420727 ( 32) TGACCTTT 1 chr12:65587062-65587142 ( 24) TGACCTTT 1 chr3:46458053-46458133 ( 69) TGACCTTT 1 chr7:121035005-121035085 ( 47) TGACCTTT 1 chr16:56390026-56390106 ( 35) TGACCTTT 1 chr10:32241069-32241149 ( 31) TGACCTTT 1 chr17:8080525-8080605 ( 45) TGACCTTT 1 chr2:9843956-9844036 ( 27) TGACCTTT 1 chr18:10081623-10081703 ( 25) TGACCTTT 1 chr16:86962282-86962362 ( 52) TGACCTTT 1 chr1:27675491-27675571 ( 18) TGACCTTT 1 chr13:52736937-52737017 ( 43) TGACCTTT 1 chr1:23428157-23428237 ( 46) TGACCTTT 1 chr5:149730175-149730255 ( 51) TGACCTTT 1 chr1:61557383-61557463 ( 68) TGACCTTT 1 chr9:75763499-75763579 ( 42) TGACCTTT 1 chr16:75163824-75163904 ( 49) TGACCTTT 1 chr19:49713401-49713481 ( 39) TGACCTTT 1 chr12:122791127-12279120 ( 50) TGACCTTT 1 chr1:46087992-46088072 ( 59) TGACCTCT 1 chr12:31910160-31910240 ( 55) TGACCTCT 1 chr1:236696292-236696372 ( 53) TGACCTCT 1 chr15:51673523-51673603 ( 42) TGACCTCT 1 chr9:37362577-37362657 ( 43) TGACCTCT 1 chr4:154331156-154331236 ( 53) TGACCTCT 1 chr20:36825075-36825155 ( 38) TGACCTCT 1 chr17:54987715-54987795 ( 28) TGACCTCT 1 chr13:114035512-11403559 ( 26) TGACCTCT 1 chr19:1068262-1068342 ( 17) TGACCTCT 1 chr17:7370339-7370419 ( 49) TGACCTCT 1 chr19:50919325-50919405 ( 71) TGACCTCT 1 chr5:150505894-150505974 ( 65) TGACCTCT 1 chr19:46914875-46914955 ( 62) TGACCTCT 1 chr1:136680-136760 ( 25) TGACCTCT 1 chr17:55536810-55536890 ( 23) TGACCTCT 1 chr1:136884-136964 ( 65) TGACCTCT 1 chr12:104351283-10435136 ( 45) TGACCTCT 1 chr16:77265085-77265165 ( 61) TGACCTCT 1 chr6:149450708-149450788 ( 68) TGACCTCT 1 chr3:39225964-39226044 ( 66) TGACCTCT 1 chr3:127314338-127314418 ( 55) TGACCTCT 1 chr19:51294414-51294494 ( 51) TGACCTCT 1 chr17:26075268-26075348 ( 50) TGACCTCT 1 chr11:66601918-66601998 ( 42) TGACCTCT 1 chr4:84176876-84176956 ( 58) TGACCTCT 1 chr1:15790960-15791040 ( 19) TGACCTTA 1 chr10:32790981-32791061 ( 49) TGACCTTA 1 chr20:42087835-42087915 ( 66) TGACCTTA 1 chr5:78211113-78211193 ( 28) TGACCTTA 1 chr19:51041200-51041280 ( 47) TGACCTCA 1 chr9:35731547-35731627 ( 22) TGACCCTT 1 chr3:45506086-45506166 ( 42) TGACCTCA 1 chr16:69787-69867 ( 71) TGACCCTT 1 chr21:47438688-47438768 ( 24) TGACCCTT 1 chr2:27229506-27229586 ( 23) TGACCTCA 1 chr6:151695336-151695416 ( 53) TGACCCTT 1 chr1:92783528-92783608 ( 53) TGACCTCA 1 chr19:13162543-13162623 ( 10) TGACCTCA 1 chr3:186928861-186928941 ( 10) TGACCCTT 1 chr1:154469524-154469604 ( 40) TGACCTTC 1 chr1:36936012-36936092 ( 1) TGACCTCA 1 chr9:130184615-130184695 ( 26) TGACCCTT 1 chr22:19592473-19592553 ( 31) TGACCTCA 1 chr17:71285140-71285220 ( 6) TGACCTTC 1 chr16:29361495-29361575 ( 56) TGACCTCA 1 chr15:77359785-77359865 ( 36) TGACCCTT 1 chr1:213140125-213140205 ( 55) TGACCTCA 1 chr1:8499644-8499724 ( 53) TGACCCTT 1 chr16:87755381-87755461 ( 32) TGACCTCC 1 chr19:6568155-6568235 ( 6) TGACCTCC 1 chr6:36650151-36650231 ( 15) TGACCCCT 1 chr11:65406015-65406095 ( 67) TGACCTCC 1 chr1:28481506-28481586 ( 36) TGACCTCC 1 chr19:59069477-59069557 ( 22) TGACCTCC 1 chr3:141428126-141428206 ( 57) TGACCTCC 1 chr17:65106932-65107012 ( 30) TGACCCCT 1 chr1:231330875-231330955 ( 72) TGACCTGT 1 chr1:203725737-203725817 ( 48) TGACCTGT 1 chr10:72453521-72453601 ( 25) TGACCTTG 1 chr17:6325374-6325454 ( 27) TGACCTTG 1 chr11:64027144-64027224 ( 26) TGACCTGT 1 chr1:176660972-176661052 ( 57) TGACCTTG 1 chr9:95871634-95871714 ( 61) TGACCTTG 1 chr7:116250342-116250422 ( 13) TGACCTGT 1 chr1:246859892-246859972 ( 39) TGACCTTG 1 chr1:95273796-95273876 ( 18) TGACCTGT 1 chr2:30687602-30687682 ( 39) TGACCTTG 1 chr6:15970895-15970975 ( 69) TGACCTAT 1 chr2:201232022-201232102 ( 61) TGACCTCG 1 chr6:105483311-105483391 ( 8) TGACCTAT 1 chr1:200398490-200398570 ( 47) TGACCTAT 1 chr7:2885693-2885773 ( 24) TGACCTAT 1 chr20:44399901-44399981 ( 16) TGCCCTTT 1 chr8:100649729-100649809 ( 40) TAACCTTT 1 chr2:175901424-175901504 ( 43) TAACCTTT 1 chr1:2203533-2203613 ( 72) TGCCCTCT 1 chr10:97832593-97832673 ( 37) TAACCTTT 1 chr6:105402494-105402574 ( 67) TAACCTCT 1 chr3:16588013-16588093 ( 28) TAACCTCT 1 chr8:20061378-20061458 ( 1) TGGCCTTT 1 chr7:99867451-99867531 ( 62) TGGCCTTT 1 chr2:29229745-29229825 ( 30) TGGCCTTT 1 chr1:211869049-211869129 ( 24) TGACCCTC 1 chr20:49039765-49039845 ( 12) TGACCCCA 1 chr10:126329466-12632954 ( 21) TGACCCCA 1 chr16:11243051-11243131 ( 13) TGACCCCA 1 chr16:85884053-85884133 ( 34) TGACCCTC 1 chr22:18260168-18260248 ( 54) TGACCCCC 1 chr11:94877700-94877780 ( 26) TGACCCTG 1 chr5:150632168-150632248 ( 34) TGACATTT 1 chr12:92172815-92172895 ( 19) TGACCCAT 1 chr6:99873759-99873839 ( 56) TGACCCCG 1 chr16:30198621-30198701 ( 55) TGACCTAC 1 chr17:57635538-57635618 ( 40) TGACATCT 1 chr11:73730473-73730553 ( 62) GGACCTCT 1 chr4:185736683-185736763 ( 56) TGACCTGG 1 chr11:76316950-76317030 ( 66) GGACCTCT 1 chr12:131925526-13192560 ( 52) TGCCCTTA 1 chr2:64246970-64247050 ( 30) TGCCCTTC 1 chr8:8923468-8923548 ( 51) TGACTTTT 1 chr10:82026397-82026477 ( 3) TGCCCTCC 1 chr1:48221223-48221303 ( 54) TGCCCCCT 1 chr15:58574627-58574707 ( 1) TAACCTCC 1 chr7:101331553-101331633 ( 65) TGCCCTCG 1 chr11:15601733-15601813 ( 40) TGGCCTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.4455 E= 4.3e-116 -1370 -1370 -408 201 -242 -1370 190 -1370 192 -230 -308 -1370 -1370 195 -1370 -1370 -401 192 -1370 -502 -1370 -78 -1370 180 -242 78 -228 91 -92 -120 -162 147 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 133 E= 4.3e-116 0.000000 0.000000 0.015038 0.984962 0.045113 0.000000 0.954887 0.000000 0.917293 0.052632 0.030075 0.000000 0.000000 1.000000 0.000000 0.000000 0.015038 0.977444 0.000000 0.007519 0.000000 0.150376 0.000000 0.849624 0.045113 0.443609 0.052632 0.458647 0.127820 0.112782 0.082707 0.676692 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTYT MEME-2 regular expression -------------------------------------------------------------------------------- TGACCT[TC]T -------------------------------------------------------------------------------- Time 8.29 secs. ******************************************************************************** ******************************************************************************** MOTIF AGGTCARR MEME-3 width = 8 sites = 45 llr = 352 E-value = 5.4e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 Description -------------------------------------------------------------------------------- Simplified A 8::::a43 pos.-specific C :::2a::2 probability G 2aa2::66 matrix T :::6:::: bits 2.0 ** ** 1.8 ** ** 1.6 ** ** 1.4 ** ** Relative 1.2 ** ** Entropy 1.0 *** *** (11.3 bits) 0.8 *** *** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGGTCAGG consensus G C AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:65319234-65319314 3 1.56e-05 AC AGGTCAGG CTGTAGAAGG chr2:72025566-72025646 25 1.56e-05 CTAGGGCCAC AGGTCAGG CCAGGGGTCA chr4:1595968-1596048 19 1.56e-05 ACAGGTCACC AGGTCAGG GCTCAGCCTG chr1:29107986-29108066 61 1.56e-05 gggtcagatt aggtcagg ggtcgatctt chr19:38687052-38687132 13 3.05e-05 cagagcatgg aggtcaag ggcagagcaa chr15:29360322-29360402 27 3.05e-05 GGGAGGTCAC AGGTCAAG CCTTCTGGGA chr1:53376399-53376479 36 3.05e-05 GAGAGGTCAA AGGTCAAG TAAACGAGAA chr21:37582567-37582647 33 3.05e-05 tgaggtcagg aggtcaag agcagccggg chr11:62240279-62240359 73 3.05e-05 tgaggtcagg aggtcaag chr11:76316950-76317030 48 3.05e-05 caaaggtcaa aggtcaag ccaggcactt chr17:6374180-6374260 3 4.54e-05 CA AGGTCAGA GCTCTGATTT chr3:52272263-52272343 50 4.54e-05 TCAGAGGTCA AGGTCAGA TAGGCAGCTT chr18:53331262-53331342 15 5.94e-05 GGAGGTCAGA AGGTCAAA GGTGACAAAC chr19:19745179-19745259 34 5.94e-05 CAGAAAACAC AGGTCAAA GGTCAGAGGT chr13:50735438-50735518 2 7.61e-05 g aggccagg ggactgacat chr16:56998867-56998947 54 7.61e-05 gctactcagg aggccagg ggaggtcaag chr7:158806121-158806201 66 1.25e-04 ggttgggttg gggtcagg gttgagg chr22:47158720-47158800 53 1.25e-04 GGCCAGGTCG GGGTCAGG GGTCAGAGGT chr16:90235511-90235591 59 1.25e-04 ACGCTGAGAG AGGTCAGC CTGAGCCCTT chr5:49729-49809 34 1.25e-04 gttagggtca gggtcagg gtacagcact chr16:90235311-90235391 66 1.25e-04 ACGCTGCGAG AGGTCAGC CTGAGCC chr8:127335201-127335281 12 1.25e-04 ccacctttgc aggtcagc ctaaaggtca chr15:58574627-58574707 61 1.25e-04 ggaggtcaga aggtcagc ctggattcaa chr6:105483311-105483391 45 1.25e-04 TCAACATCTG AGGGCAGG AGATTAAGGC chr21:46738903-46738983 27 1.41e-04 CTTCAGAGCC AGGCCAAG GTCAAAGGGC chr19:10416120-10416200 73 1.41e-04 CAGGGGTCAG AGGCCAAG chr11:62235386-62235466 47 1.87e-04 cacagtgccg gggtcaag ggctcaaaga chr19:49136792-49136872 30 1.87e-04 AATGCTTGAT AGGGCAAG ATCAGCTGGG chr4:41911343-41911423 53 1.87e-04 caagcatccc aggtcaac ttcagactcc chr12:122155071-12215515 28 1.87e-04 TACAGACACA AGGGCAAG TAATTTAATG chr13:28982439-28982519 63 2.03e-04 TGGAAACTAT AGGCCAGA CTTATTGCCA chr17:7370339-7370419 7 2.03e-04 TGGAAG AGGCCAGA GATACCTCAG chr1:27934003-27934083 10 2.03e-04 AGAGGCCAG AGGCCAGA GGGCAAAGGT chr18:55578211-55578291 28 2.34e-04 CAGAGGGCAG AGGGCAGA GGTGCCCAAC chr1:11812869-11812949 55 2.34e-04 aaggtggctg gggtcaga tgtgcaggct chr18:12767157-12767237 13 2.34e-04 gccaagccct gggtcaga tgtaaaggtc chr16:29361495-29361575 24 2.49e-04 aacagtttgg aggccaaa tttgaccccc chr10:73930997-73931077 61 2.78e-04 cggaggctcc agggcaaa tcacttcctt chr9:78968308-78968388 46 2.78e-04 CATAAATGCT GGGTCAAA GAAAACCACA chr6:6665810-6665890 27 3.13e-04 GAAGGTCAAA AGGCCAGC CTGTCTGAAT chr1:211806929-211807009 27 3.63e-04 cacaTAGGGA GGGGCAGG AGGAGGGAGA chr9:130184615-130184695 10 3.63e-04 GGCCAAGTT AGGGCAGC CAGGGTCATG chr3:46458053-46458133 32 3.96e-04 acttggaaga gggccaag tggacgactt chr6:36650151-36650231 65 4.44e-04 GTATGACTCA GGGGCAAG TCTCATAT chr17:6325374-6325454 54 5.24e-04 GCGTCAGGGA TGGTCAGG GCTGATGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:65319234-65319314 1.6e-05 2_[+3]_70 chr2:72025566-72025646 1.6e-05 24_[+3]_48 chr4:1595968-1596048 1.6e-05 18_[+3]_54 chr1:29107986-29108066 1.6e-05 60_[+3]_12 chr19:38687052-38687132 3e-05 12_[+3]_60 chr15:29360322-29360402 3e-05 26_[+3]_46 chr1:53376399-53376479 3e-05 35_[+3]_37 chr21:37582567-37582647 3e-05 32_[+3]_40 chr11:62240279-62240359 3e-05 72_[+3] chr11:76316950-76317030 3e-05 47_[+3]_25 chr17:6374180-6374260 4.5e-05 2_[+3]_70 chr3:52272263-52272343 4.5e-05 49_[+3]_23 chr18:53331262-53331342 5.9e-05 14_[+3]_58 chr19:19745179-19745259 5.9e-05 33_[+3]_39 chr13:50735438-50735518 7.6e-05 1_[+3]_71 chr16:56998867-56998947 7.6e-05 53_[+3]_19 chr7:158806121-158806201 0.00012 65_[+3]_7 chr22:47158720-47158800 0.00012 52_[+3]_20 chr16:90235511-90235591 0.00012 58_[+3]_14 chr5:49729-49809 0.00012 33_[+3]_39 chr16:90235311-90235391 0.00012 65_[+3]_7 chr8:127335201-127335281 0.00012 11_[+3]_61 chr15:58574627-58574707 0.00012 60_[+3]_12 chr6:105483311-105483391 0.00012 44_[+3]_28 chr21:46738903-46738983 0.00014 26_[+3]_46 chr19:10416120-10416200 0.00014 72_[+3] chr11:62235386-62235466 0.00019 46_[+3]_26 chr19:49136792-49136872 0.00019 29_[+3]_43 chr4:41911343-41911423 0.00019 52_[+3]_20 chr12:122155071-12215515 0.00019 27_[+3]_45 chr13:28982439-28982519 0.0002 62_[+3]_10 chr17:7370339-7370419 0.0002 6_[+3]_66 chr1:27934003-27934083 0.0002 9_[+3]_63 chr18:55578211-55578291 0.00023 27_[+3]_45 chr1:11812869-11812949 0.00023 54_[+3]_18 chr18:12767157-12767237 0.00023 12_[+3]_60 chr16:29361495-29361575 0.00025 23_[+3]_49 chr10:73930997-73931077 0.00028 60_[+3]_12 chr9:78968308-78968388 0.00028 45_[+3]_27 chr6:6665810-6665890 0.00031 26_[+3]_46 chr1:211806929-211807009 0.00036 26_[+3]_46 chr9:130184615-130184695 0.00036 9_[+3]_63 chr3:46458053-46458133 0.0004 31_[+3]_41 chr6:36650151-36650231 0.00044 64_[+3]_8 chr17:6325374-6325454 0.00052 53_[+3]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGGTCARR width=8 seqs=45 chr11:65319234-65319314 ( 3) AGGTCAGG 1 chr2:72025566-72025646 ( 25) AGGTCAGG 1 chr4:1595968-1596048 ( 19) AGGTCAGG 1 chr1:29107986-29108066 ( 61) AGGTCAGG 1 chr19:38687052-38687132 ( 13) AGGTCAAG 1 chr15:29360322-29360402 ( 27) AGGTCAAG 1 chr1:53376399-53376479 ( 36) AGGTCAAG 1 chr21:37582567-37582647 ( 33) AGGTCAAG 1 chr11:62240279-62240359 ( 73) AGGTCAAG 1 chr11:76316950-76317030 ( 48) AGGTCAAG 1 chr17:6374180-6374260 ( 3) AGGTCAGA 1 chr3:52272263-52272343 ( 50) AGGTCAGA 1 chr18:53331262-53331342 ( 15) AGGTCAAA 1 chr19:19745179-19745259 ( 34) AGGTCAAA 1 chr13:50735438-50735518 ( 2) AGGCCAGG 1 chr16:56998867-56998947 ( 54) AGGCCAGG 1 chr7:158806121-158806201 ( 66) GGGTCAGG 1 chr22:47158720-47158800 ( 53) GGGTCAGG 1 chr16:90235511-90235591 ( 59) AGGTCAGC 1 chr5:49729-49809 ( 34) GGGTCAGG 1 chr16:90235311-90235391 ( 66) AGGTCAGC 1 chr8:127335201-127335281 ( 12) AGGTCAGC 1 chr15:58574627-58574707 ( 61) AGGTCAGC 1 chr6:105483311-105483391 ( 45) AGGGCAGG 1 chr21:46738903-46738983 ( 27) AGGCCAAG 1 chr19:10416120-10416200 ( 73) AGGCCAAG 1 chr11:62235386-62235466 ( 47) GGGTCAAG 1 chr19:49136792-49136872 ( 30) AGGGCAAG 1 chr4:41911343-41911423 ( 53) AGGTCAAC 1 chr12:122155071-12215515 ( 28) AGGGCAAG 1 chr13:28982439-28982519 ( 63) AGGCCAGA 1 chr17:7370339-7370419 ( 7) AGGCCAGA 1 chr1:27934003-27934083 ( 10) AGGCCAGA 1 chr18:55578211-55578291 ( 28) AGGGCAGA 1 chr1:11812869-11812949 ( 55) GGGTCAGA 1 chr18:12767157-12767237 ( 13) GGGTCAGA 1 chr16:29361495-29361575 ( 24) AGGCCAAA 1 chr10:73930997-73931077 ( 61) AGGGCAAA 1 chr9:78968308-78968388 ( 46) GGGTCAAA 1 chr6:6665810-6665890 ( 27) AGGCCAGC 1 chr1:211806929-211807009 ( 27) GGGGCAGG 1 chr9:130184615-130184695 ( 10) AGGGCAGC 1 chr3:46458053-46458133 ( 32) GGGCCAAG 1 chr6:36650151-36650231 ( 65) GGGGCAAG 1 chr17:6325374-6325454 ( 54) TGGTCAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2095 E= 5.4e-002 164 -1214 -20 -345 -1214 -1214 197 -1214 -1214 -1214 197 -1214 -1214 -22 -52 130 -1214 195 -1214 -1214 205 -1214 -1214 -1214 80 -1214 118 -1214 25 -73 112 -1214 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 45 E= 5.4e-002 0.755556 0.000000 0.222222 0.022222 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.222222 0.177778 0.600000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.422222 0.000000 0.577778 0.000000 0.288889 0.155556 0.555556 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGTCARR MEME-3 regular expression -------------------------------------------------------------------------------- [AG]GG[TC]CA[GA][GA] -------------------------------------------------------------------------------- Time 11.67 secs. ******************************************************************************** ******************************************************************************** MOTIF MTGASTCA MEME-4 width = 8 sites = 15 llr = 146 E-value = 1.4e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 6::a:::a pos.-specific C 4:::5:a: probability G ::a:5::: matrix T :a:::a:: bits 2.0 *** *** 1.8 *** *** 1.6 *** *** 1.4 *** *** Relative 1.2 *** *** Entropy 1.0 ******** (14.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATGACTCA consensus C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr21:46738903-46738983 9 1.44e-05 GGTTTTCC ATGACTCA CTTCAGAGCC chr6:36650151-36650231 57 1.44e-05 TTTTAGCTGT ATGACTCA GGGGCAAGTC chr7:116250342-116250422 59 1.44e-05 GATAAAGAAG ATGACTCA GTTTTAAATC chr3:141428126-141428206 40 1.44e-05 tggtgtgatc atgactca ctgcagcctt chr2:29229745-29229825 7 1.44e-05 CCTCTC ATGACTCA CTGGCCCCAG chrX:13077964-13078044 33 2.86e-05 AAAACTTAGG ATGAGTCA CCCAAGGAAA chr10:73930997-73931077 25 2.86e-05 gaagtctaac atgagtca gcagggctgc chr5:78054089-78054169 44 2.86e-05 TCTTGAATGC ATGAGTCA AACCTAAACT chr22:40002813-40002893 4 2.86e-05 ggc atgagtca ctatgtctgg chr7:132521673-132521753 70 4.41e-05 ACCAGTCTTT CTGACTCA AGA chr6:170125477-170125557 27 4.41e-05 TCAGTCCAGC CTGACTCA CTTGCCTCAG chr2:9843956-9844036 8 4.41e-05 tctgagt ctgactca ctgctagcct chr3:142569294-142569374 48 5.93e-05 acaatagaga ctgagtca acaagtagga chr8:23405466-23405546 4 5.93e-05 AAG CTGAGTCA TCCAGGGGTC chr17:37027845-37027925 69 5.93e-05 CCTTTGGCCT CTGAGTCA GCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:46738903-46738983 1.4e-05 8_[+4]_64 chr6:36650151-36650231 1.4e-05 56_[+4]_16 chr7:116250342-116250422 1.4e-05 58_[+4]_14 chr3:141428126-141428206 1.4e-05 39_[+4]_33 chr2:29229745-29229825 1.4e-05 6_[+4]_66 chrX:13077964-13078044 2.9e-05 32_[+4]_40 chr10:73930997-73931077 2.9e-05 24_[+4]_48 chr5:78054089-78054169 2.9e-05 43_[+4]_29 chr22:40002813-40002893 2.9e-05 3_[+4]_69 chr7:132521673-132521753 4.4e-05 69_[+4]_3 chr6:170125477-170125557 4.4e-05 26_[+4]_46 chr2:9843956-9844036 4.4e-05 7_[+4]_65 chr3:142569294-142569374 5.9e-05 47_[+4]_25 chr8:23405466-23405546 5.9e-05 3_[+4]_69 chr17:37027845-37027925 5.9e-05 68_[+4]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MTGASTCA width=8 seqs=15 chr21:46738903-46738983 ( 9) ATGACTCA 1 chr6:36650151-36650231 ( 57) ATGACTCA 1 chr7:116250342-116250422 ( 59) ATGACTCA 1 chr3:141428126-141428206 ( 40) ATGACTCA 1 chr2:29229745-29229825 ( 7) ATGACTCA 1 chrX:13077964-13078044 ( 33) ATGAGTCA 1 chr10:73930997-73931077 ( 25) ATGAGTCA 1 chr5:78054089-78054169 ( 44) ATGAGTCA 1 chr22:40002813-40002893 ( 4) ATGAGTCA 1 chr7:132521673-132521753 ( 70) CTGACTCA 1 chr6:170125477-170125557 ( 27) CTGACTCA 1 chr2:9843956-9844036 ( 8) CTGACTCA 1 chr3:142569294-142569374 ( 48) CTGAGTCA 1 chr8:23405466-23405546 ( 4) CTGAGTCA 1 chr17:37027845-37027925 ( 69) CTGAGTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1725 E= 1.4e+002 131 63 -1055 -1055 -1055 -1055 -1055 203 -1055 -1055 197 -1055 204 -1055 -1055 -1055 -1055 104 87 -1055 -1055 -1055 -1055 203 -1055 195 -1055 -1055 204 -1055 -1055 -1055 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 15 E= 1.4e+002 0.600000 0.400000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.533333 0.466667 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGASTCA MEME-4 regular expression -------------------------------------------------------------------------------- [AC]TGA[CG]TCA -------------------------------------------------------------------------------- Time 14.97 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTATCAG MEME-5 width = 8 sites = 8 llr = 85 E-value = 4.2e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::a::a: pos.-specific C a::::a:: probability G :::::::8 matrix T :aa:a::3 bits 2.0 ******* 1.8 ******* 1.6 ******* 1.4 ******* Relative 1.2 ******** Entropy 1.0 ******** (15.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTTATCAG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:27180422-27180502 4 1.46e-05 tta cttatcag cccaccccac chr20:36825075-36825155 50 1.46e-05 ACCTCTGGGG CTTATCAG CCTGGCCCCT chr1:28481506-28481586 15 1.46e-05 cggaaataag CTTATCAG Atggcccttg chr16:85884053-85884133 1 1.46e-05 . cttatcag gcatggcctc chr6:149450708-149450788 49 1.46e-05 AGGAGATTGT CTTATCAG CACCTAACAT chr3:127314338-127314418 46 1.46e-05 GCTCCTAGTC CTTATCAG ATGACCTCTG chr22:40002813-40002893 40 2.85e-05 aactctttgt cttatcat ttaagctaca chr17:8080525-8080605 26 2.85e-05 CCAAGAAGCT CTTATCAT CGGCGACCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:27180422-27180502 1.5e-05 3_[+5]_69 chr20:36825075-36825155 1.5e-05 49_[+5]_23 chr1:28481506-28481586 1.5e-05 14_[+5]_58 chr16:85884053-85884133 1.5e-05 [+5]_72 chr6:149450708-149450788 1.5e-05 48_[+5]_24 chr3:127314338-127314418 1.5e-05 45_[+5]_27 chr22:40002813-40002893 2.8e-05 39_[+5]_33 chr17:8080525-8080605 2.8e-05 25_[+5]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTATCAG width=8 seqs=8 chr8:27180422-27180502 ( 4) CTTATCAG 1 chr20:36825075-36825155 ( 50) CTTATCAG 1 chr1:28481506-28481586 ( 15) CTTATCAG 1 chr16:85884053-85884133 ( 1) CTTATCAG 1 chr6:149450708-149450788 ( 49) CTTATCAG 1 chr3:127314338-127314418 ( 46) CTTATCAG 1 chr22:40002813-40002893 ( 40) CTTATCAT 1 chr17:8080525-8080605 ( 26) CTTATCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.155 E= 4.2e+004 -965 195 -965 -965 -965 -965 -965 203 -965 -965 -965 203 204 -965 -965 -965 -965 -965 -965 203 -965 195 -965 -965 204 -965 -965 -965 -965 -965 156 3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 4.2e+004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.750000 0.250000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTATCAG MEME-5 regular expression -------------------------------------------------------------------------------- CTTATCA[GT] -------------------------------------------------------------------------------- Time 18.23 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:6665810-6665890 9.89e-03 18_[+3(5.94e-05)]_54 chr2:99029522-99029602 2.35e-03 35_[+3(5.94e-05)]_37 chr21:36842885-36842965 1.06e-03 6_[+1(7.38e-05)]_66 chr1:8499644-8499724 9.47e-04 43_[+1(2.89e-05)]_1_[+2(9.14e-05)]_\ 20 chr12:122791127-12279120 1.16e-03 49_[+2(1.47e-05)]_23 chr3:49195703-49195783 6.29e-04 49_[+3(1.56e-05)]_23 chr7:2885693-2885773 1.80e-04 8_[+3(3.05e-05)]_64 chr4:84176876-84176956 5.00e-03 57_[+2(3.02e-05)]_15 chr1:48221223-48221303 6.31e-03 30_[+1(4.39e-05)]_42 chr19:49713401-49713481 4.64e-02 28_[+2(9.14e-05)]_2_[+2(1.47e-05)]_\ 34 chr11:66601918-66601998 6.84e-05 28_[+3(5.94e-05)]_5_[+2(3.02e-05)]_\ 31 chr16:75163824-75163904 4.72e-04 48_[+2(1.47e-05)]_24 chr1:182328955-182329035 1.74e-01 80 chr9:116036901-116036981 7.30e-02 80 chr9:75763499-75763579 3.48e-02 41_[+2(1.47e-05)]_[+2(4.48e-05)]_23 chr5:149501798-149501878 1.91e-02 56_[+1(2.89e-05)]_16 chr1:29107986-29108066 2.38e-03 43_[+3(1.56e-05)]_9_[+3(1.56e-05)]_\ 12 chr19:10197266-10197346 2.03e-02 80 chr19:11513001-11513081 7.35e-01 80 chr1:61557383-61557463 5.16e-04 38_[+1(7.38e-05)]_21_[+2(1.47e-05)]_\ 5 chr2:30687602-30687682 4.75e-04 80 chr10:97832593-97832673 7.68e-02 80 chr11:76316950-76317030 3.23e-04 38_[+1(2.89e-05)]_1_[+3(3.05e-05)]_\ 25 chr5:149730175-149730255 5.07e-03 50_[+2(1.47e-05)]_22 chr17:26075268-26075348 1.16e-02 49_[+2(3.02e-05)]_23 chr1:23428157-23428237 2.66e-04 29_[+1(7.38e-05)]_8_[+2(1.47e-05)]_\ 27 chr8:125488598-125488678 1.16e-01 80 chr21:45011731-45011811 5.94e-03 80 chr2:29229745-29229825 3.05e-03 6_[+4(1.44e-05)]_66 chr19:51294414-51294494 1.99e-01 22_[+2(9.14e-05)]_20_[+2(3.02e-05)]_\ 22 chr5:78211113-78211193 1.28e-02 27_[+2(4.48e-05)]_45 chr3:127314338-127314418 1.54e-04 45_[+5(1.46e-05)]_1_[+2(3.02e-05)]_\ 18 chr4:1595968-1596048 1.65e-03 18_[+3(1.56e-05)]_54 chr17:65106932-65107012 1.74e-02 80 chr3:39225964-39226044 5.89e-03 65_[+2(3.02e-05)]_7 chr1:2203533-2203613 6.13e-04 19_[+1(2.89e-05)]_53 chr3:52272263-52272343 5.69e-04 41_[+1(1.49e-05)]_[+3(4.54e-05)]_23 chr6:149450708-149450788 1.35e-03 48_[+5(1.46e-05)]_11_[+2(3.02e-05)]_\ 5 chr16:85884053-85884133 4.09e-07 [+5(1.46e-05)]_49_[+3(1.56e-05)]_15 chr1:200398490-200398570 1.63e-04 31_[+3(3.05e-05)]_41 chr1:95273796-95273876 2.11e-01 80 chr1:27934003-27934083 5.14e-03 21_[+1(2.89e-05)]_51 chr3:141428126-141428206 1.02e-03 39_[+4(1.44e-05)]_33 chr13:52736937-52737017 4.47e-04 42_[+2(1.47e-05)]_30 chr6:105483311-105483391 4.90e-04 80 chr1:228974293-228974373 7.33e-05 51_[+2(9.14e-05)]_21 chr12:131925526-13192560 3.15e-01 80 chr5:132759654-132759734 1.42e-02 80 chr16:77265085-77265165 1.46e-02 60_[+2(3.02e-05)]_12 chr19:10416120-10416200 2.76e-03 49_[+1(1.49e-05)]_23 chr20:35513917-35513997 1.36e-03 23_[+1(2.89e-05)]_49 chr11:62240279-62240359 4.69e-05 62_[+1(4.39e-05)]_2_[+3(3.05e-05)] chr7:99867451-99867531 1.07e-01 80 chr12:56596274-56596354 8.67e-01 80 chr19:59069477-59069557 2.47e-01 80 chr1:27675491-27675571 5.70e-02 17_[+2(1.47e-05)]_28_[+2(3.02e-05)]_\ 19 chr21:40376126-40376206 4.75e-04 28_[+3(1.56e-05)]_44 chr12:104351283-10435136 3.64e-04 28_[+1(7.38e-05)]_8_[+2(3.02e-05)]_\ 28 chr15:58574627-58574707 5.08e-04 50_[+1(7.38e-05)]_[+1(8.86e-05)]_14 chr16:86962282-86962362 3.57e-02 51_[+2(1.47e-05)]_[+2(3.02e-05)]_13 chr7:99137104-99137184 2.02e-01 80 chr8:123772619-123772699 1.41e-03 80 chr1:213140125-213140205 7.08e-02 46_[+2(9.14e-05)]_[+2(9.14e-05)]_18 chr15:77359785-77359865 3.08e-02 35_[+2(9.14e-05)]_37 chr1:246859892-246859972 3.18e-02 80 chr1:136884-136964 1.84e-02 15_[+2(3.02e-05)]_41_[+2(3.02e-05)]_\ 8 chr17:55536810-55536890 7.01e-02 22_[+2(3.02e-05)]_50 chr1:136680-136760 1.12e-02 24_[+2(3.02e-05)]_40_[+2(3.02e-05)] chr16:29361495-29361575 8.19e-03 55_[+2(9.14e-05)]_17 chr18:10081623-10081703 3.51e-02 24_[+2(1.47e-05)]_48 chr8:11724164-11724244 5.06e-01 80 chr2:175901424-175901504 1.46e-01 80 chr2:9843956-9844036 1.43e-04 7_[+4(4.41e-05)]_11_[+2(1.47e-05)]_\ 46 chr17:8080525-8080605 4.10e-04 25_[+5(2.85e-05)]_11_[+2(1.47e-05)]_\ 28 chr19:46914875-46914955 6.76e-03 61_[+2(3.02e-05)]_11 chr17:71285140-71285220 1.98e-01 5_[+2(9.14e-05)]_67 chr22:40002813-40002893 1.17e-03 3_[+4(2.86e-05)]_28_[+5(2.85e-05)]_\ 33 chr21:37582567-37582647 4.14e-04 22_[+1(4.39e-05)]_2_[+3(3.05e-05)]_\ 40 chr7:116250342-116250422 3.29e-04 58_[+4(1.44e-05)]_14 chr9:95871634-95871714 2.77e-04 34_[+3(3.05e-05)]_38 chr11:15601733-15601813 3.90e-05 15_[+3(3.05e-05)]_57 chr18:54318778-54318858 3.38e-01 80 chr10:32241069-32241149 6.66e-02 30_[+2(1.47e-05)]_42 chr8:127335201-127335281 2.06e-03 21_[+1(2.89e-05)]_51 chr16:90235311-90235391 1.48e-03 14_[+1(1.49e-05)]_41_[+1(1.49e-05)]_\ 9 chr12:54688116-54688196 7.59e-03 80 chr20:44399901-44399981 8.36e-02 80 chr20:42087835-42087915 9.67e-02 39_[+2(9.14e-05)]_6_[+2(9.14e-05)]_\ 4_[+2(4.48e-05)]_7 chr5:150505894-150505974 3.05e-05 36_[+1(1.49e-05)]_20_[+2(3.02e-05)]_\ 8 chr16:11243051-11243131 1.51e-02 80 chr12:122155071-12215515 1.37e-02 7_[+1(8.86e-05)]_65 chr2:72025566-72025646 3.73e-03 24_[+3(1.56e-05)]_48 chr18:12767157-12767237 1.60e-03 23_[+1(2.89e-05)]_49 chr19:50864972-50865052 3.00e-01 80 chr1:176660972-176661052 1.46e-03 48_[+1(7.38e-05)]_24 chr1:28481506-28481586 8.56e-03 14_[+5(1.46e-05)]_58 chr4:185736683-185736763 1.33e-04 30_[+1(1.49e-05)]_42 chr4:41911343-41911423 4.01e-04 38_[+3(3.05e-05)]_34 chr1:53376399-53376479 3.67e-03 26_[+1(1.49e-05)]_1_[+3(3.05e-05)]_\ 37 chr19:49136792-49136872 9.05e-03 55_[+1(2.89e-05)]_17 chr22:38589769-38589849 1.50e-03 31_[+1(2.89e-05)]_41 chr16:56390026-56390106 4.99e-02 34_[+2(1.47e-05)]_38 chr2:65086624-65086704 3.81e-01 80 chr21:44357354-44357434 6.48e-01 80 chr17:57635538-57635618 1.12e-03 11_[+1(7.38e-05)]_61 chr2:102667364-102667444 4.15e-04 41_[+1(2.89e-05)]_31 chr19:50919325-50919405 7.07e-02 70_[+2(3.02e-05)]_2 chr17:7370339-7370419 5.41e-05 34_[+3(3.05e-05)]_6_[+2(3.02e-05)]_\ 24 chr7:121035005-121035085 5.90e-03 46_[+2(1.47e-05)]_26 chr15:29360322-29360402 3.25e-03 17_[+1(7.38e-05)]_1_[+3(3.05e-05)]_\ 46 chr3:46458053-46458133 2.24e-03 68_[+2(1.47e-05)]_4 chr11:64027144-64027224 6.24e-02 80 chr17:6325374-6325454 7.67e-03 80 chr22:18260168-18260248 3.93e-01 80 chr22:19592473-19592553 1.55e-01 30_[+2(9.14e-05)]_42 chr8:22287745-22287825 5.79e-01 80 chr5:49729-49809 4.72e-02 80 chr16:90235511-90235591 3.51e-03 7_[+1(1.49e-05)]_41_[+1(1.49e-05)]_\ 16 chr19:1068262-1068342 6.89e-04 16_[+2(3.02e-05)]_56 chr11:62235386-62235466 6.56e-04 28_[+3(4.54e-05)]_44 chr12:65587062-65587142 4.16e-02 23_[+2(1.47e-05)]_49 chr5:150632168-150632248 1.02e-01 80 chr19:13283396-13283476 3.96e-04 35_[+3(1.56e-05)]_37 chr3:14877723-14877803 5.95e-01 80 chr19:8420647-8420727 2.18e-02 31_[+2(1.47e-05)]_41 chr6:26219234-26219314 1.44e-02 31_[+1(2.89e-05)]_41 chr13:114035512-11403559 1.63e-01 3_[+2(3.02e-05)]_14_[+2(3.02e-05)]_\ 14_[+2(3.02e-05)]_25 chr9:139917775-139917855 2.94e-01 80 chr19:4078341-4078421 3.92e-01 80 chr10:72453521-72453601 6.10e-04 16_[+1(1.49e-05)]_56 chr6:7106519-7106599 1.18e-01 80 chr11:65406015-65406095 1.14e-02 80 chr11:73730473-73730553 1.48e-04 55_[+3(1.56e-05)]_17 chr9:130184615-130184695 3.65e-03 25_[+2(9.14e-05)]_47 chr2:68514879-68514959 1.09e-03 12_[+3(4.54e-05)]_60 chrX:118611847-118611927 1.84e-04 7_[+1(2.89e-05)]_65 chr19:38806263-38806343 9.92e-01 80 chr1:201139781-201139861 5.88e-03 80 chr2:201232022-201232102 1.01e-04 48_[+3(1.56e-05)]_24 chr16:30198621-30198701 3.83e-01 80 chr1:161147739-161147819 4.40e-01 80 chr7:106456286-106456366 8.95e-04 18_[+1(2.89e-05)]_54 chr17:37027845-37027925 3.44e-04 55_[+2(1.47e-05)]_5_[+4(5.93e-05)]_\ 4 chr1:203725737-203725817 3.04e-02 80 chr12:117141187-11714126 2.07e-03 57_[+3(1.56e-05)]_15 chr5:78054089-78054169 5.64e-04 43_[+4(2.86e-05)]_29 chr19:19745179-19745259 2.37e-03 33_[+3(5.94e-05)]_4_[+1(1.49e-05)]_\ 27 chr1:36936012-36936092 1.35e-01 [+2(9.14e-05)]_72 chr1:45142312-45142392 1.94e-05 29_[+2(1.47e-05)]_31_[+1(1.49e-05)]_\ 4 chr8:20061378-20061458 2.80e-01 80 chr16:79985437-79985517 8.56e-03 30_[+2(1.47e-05)]_20_[+2(1.47e-05)]_\ 14 chr17:54987715-54987795 4.62e-03 27_[+2(3.02e-05)]_45 chr6:36650151-36650231 2.44e-05 56_[+4(1.44e-05)]_16 chr10:126329466-12632954 1.65e-02 80 chr18:43246630-43246710 3.79e-01 80 chr1:154469524-154469604 1.02e-03 39_[+2(9.14e-05)]_33 chr19:38687052-38687132 1.12e-02 12_[+3(3.05e-05)]_12_[+3(3.05e-05)]_\ 12_[+3(3.05e-05)]_20 chr10:32790981-32791061 2.97e-02 48_[+2(4.48e-05)]_24 chr20:49039765-49039845 2.82e-01 80 chr20:36825075-36825155 6.22e-05 37_[+2(3.02e-05)]_4_[+5(1.46e-05)]_\ 23 chr16:2547485-2547565 4.39e-02 80 chr7:107204940-107205020 3.70e-02 61_[+2(1.47e-05)]_11 chr20:35502104-35502184 6.67e-02 80 chr1:19835551-19835631 5.33e-03 1_[+1(1.49e-05)]_71 chr4:154331156-154331236 1.53e-01 52_[+2(3.02e-05)]_20 chr11:94877700-94877780 7.23e-04 80 chr3:186928861-186928941 5.13e-03 9_[+2(9.14e-05)]_63 chr1:202131971-202132051 9.91e-01 80 chr22:47158720-47158800 1.25e-03 64_[+1(1.49e-05)]_8 chr19:13162543-13162623 1.11e-02 9_[+2(9.14e-05)]_63 chr16:79931670-79931750 9.09e-03 23_[+2(1.47e-05)]_49 chr5:93430931-93431011 1.16e-01 80 chr11:75133711-75133791 1.54e-03 80 chr1:92783528-92783608 7.78e-02 52_[+2(9.14e-05)]_20 chr1:211806929-211807009 1.10e-03 63_[+3(1.56e-05)]_9 chr7:101331553-101331633 1.40e-01 80 chr11:65319234-65319314 4.28e-04 2_[+3(1.56e-05)]_70 chr9:78968308-78968388 8.33e-03 80 chr5:149509686-149509766 1.52e-02 80 chr11:64073595-64073675 2.85e-03 32_[+1(2.89e-05)]_40 chr19:41827982-41828062 9.15e-01 80 chr13:28982439-28982519 2.86e-03 80 chr7:158806121-158806201 2.13e-02 80 chr6:151695336-151695416 8.23e-02 52_[+2(9.14e-05)]_20 chr4:38385361-38385441 5.97e-01 80 chr9:37362577-37362657 1.27e-03 33_[+1(1.49e-05)]_1_[+2(3.02e-05)]_\ 30 chr6:170125477-170125557 1.29e-05 26_[+4(4.41e-05)]_15_[+1(1.49e-05)]_\ 23 chr17:61920563-61920643 8.16e-02 [+1(7.38e-05)]_72 chr17:36572800-36572880 1.30e-03 66_[+1(1.49e-05)]_6 chr22:20267492-20267572 1.14e-01 80 chr15:51673523-51673603 2.17e-02 41_[+2(3.02e-05)]_31 chr21:46738903-46738983 4.26e-05 8_[+4(1.44e-05)]_16_[+3(5.94e-05)]_\ 40 chr1:231330875-231330955 6.80e-03 21_[+4(8.64e-05)]_51 chr17:6374180-6374260 8.75e-04 2_[+3(4.54e-05)]_46_[+1(1.49e-05)]_\ 16 chrX:109103050-109103130 6.00e-02 68_[+1(4.39e-05)]_4 chr19:6568155-6568235 1.13e-04 47_[+1(2.89e-05)]_25 chr5:6408849-6408929 1.52e-05 10_[+3(1.56e-05)]_62 chr1:236696292-236696372 1.52e-02 52_[+2(3.02e-05)]_20 chr2:27229506-27229586 2.05e-01 22_[+2(9.14e-05)]_50 chr8:100649729-100649809 1.77e-01 80 chr3:16588013-16588093 2.48e-01 80 chr10:82026397-82026477 3.25e-01 80 chr8:23405466-23405546 8.64e-04 3_[+4(5.93e-05)]_69 chr2:64246970-64247050 8.31e-04 45_[+1(2.89e-05)]_27 chr13:50909293-50909373 9.36e-01 80 chr7:75536525-75536605 7.74e-01 80 chr16:87755381-87755461 2.35e-04 56_[+1(4.39e-05)]_16 chr6:112365090-112365170 3.64e-02 36_[+2(1.47e-05)]_36 chr1:11812869-11812949 1.74e-03 35_[+1(4.39e-05)]_37 chr18:55578211-55578291 2.40e-02 80 chr17:4110417-4110497 6.58e-01 80 chr12:31910160-31910240 1.66e-02 54_[+2(3.02e-05)]_18 chr1:211869049-211869129 5.01e-01 80 chr9:33165801-33165881 4.53e-01 80 chr9:124861714-124861794 4.69e-02 80 chr3:142569294-142569374 5.46e-05 25_[+1(1.49e-05)]_14_[+4(5.93e-05)]_\ 25 chr17:76407713-76407793 4.55e-04 58_[+3(1.56e-05)]_14 chr7:132521673-132521753 5.89e-04 36_[+2(1.47e-05)]_25_[+4(4.41e-05)]_\ 3 chr18:53331262-53331342 7.72e-03 4_[+1(7.38e-05)]_2_[+3(5.94e-05)]_\ 58 chr16:56998867-56998947 3.35e-03 53_[+3(7.61e-05)]_2_[+3(3.05e-05)]_\ 9 chr7:129425030-129425110 2.25e-03 37_[+1(2.89e-05)]_35 chr21:47438688-47438768 1.65e-02 23_[+2(9.14e-05)]_1_[+2(9.14e-05)]_\ 40 chr6:105402494-105402574 6.74e-02 80 chr12:57395366-57395446 7.15e-03 67_[+3(5.94e-05)]_5 chr6:158826493-158826573 6.72e-03 80 chr1:150849371-150849451 1.03e-02 32_[+1(1.49e-05)]_40 chr10:73930997-73931077 5.49e-05 8_[+3(4.54e-05)]_8_[+4(2.86e-05)]_\ 48 chrX:13077964-13078044 1.90e-05 32_[+4(2.86e-05)]_16_[+1(1.49e-05)]_\ 16 chr1:15790960-15791040 6.69e-03 18_[+2(4.48e-05)]_54 chr1:161277259-161277339 3.60e-04 39_[+4(5.93e-05)]_1_[+3(4.54e-05)]_\ 24 chr8:8923468-8923548 6.94e-03 80 chr6:99873759-99873839 6.16e-02 80 chr16:69787-69867 1.21e-01 70_[+2(9.14e-05)]_2 chr12:92172815-92172895 3.43e-02 80 chr1:46087992-46088072 1.03e-01 58_[+2(3.02e-05)]_14 chr21:45277523-45277603 2.71e-03 39_[+3(1.56e-05)]_33 chr8:11799830-11799910 6.89e-04 80 chr7:129485557-129485637 8.68e-01 80 chr16:30710512-30710592 1.52e-01 80 chr3:45506086-45506166 6.02e-02 41_[+2(9.14e-05)]_31 chr6:30524562-30524642 4.71e-01 80 chr9:35731547-35731627 7.62e-02 21_[+2(9.14e-05)]_51 chr22:20267287-20267367 1.92e-02 80 chr13:50735438-50735518 9.78e-02 1_[+3(7.61e-05)]_71 chr8:27180422-27180502 7.80e-04 3_[+5(1.46e-05)]_11_[+2(1.47e-05)]_\ 50 chr19:51041200-51041280 1.05e-04 46_[+2(9.14e-05)]_2_[+1(1.49e-05)]_\ 16 chr6:15970895-15970975 5.11e-04 80 chr8:17987733-17987813 5.70e-05 50_[+1(1.49e-05)]_22 chr5:133625329-133625409 6.18e-03 80 chr17:61920777-61920857 8.87e-03 [+1(4.39e-05)]_72 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n10.farnam.hpc.yale.internal ********************************************************************************