******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/NFYA.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:46148909-46148989 1.0000 80 chr19:3344313-3344393 1.0000 80 chr1:207996110-207996190 1.0000 80 chr10:102790910-10279099 1.0000 80 chr20:40247079-40247159 1.0000 80 chr20:48951805-48951885 1.0000 80 chr17:47270312-47270392 1.0000 80 chr6:43796607-43796687 1.0000 80 chr13:20532721-20532801 1.0000 80 chr22:40440218-40440298 1.0000 80 chr9:101049834-101049914 1.0000 80 chr3:10636757-10636837 1.0000 80 chr3:100211352-100211432 1.0000 80 chr21:34494586-34494666 1.0000 80 chr14:78083288-78083368 1.0000 80 chr3:149530910-149530990 1.0000 80 chr16:84314805-84314885 1.0000 80 chr14:90920811-90920891 1.0000 80 chr19:17400502-17400582 1.0000 80 chr14:23755428-23755508 1.0000 80 chr19:1790938-1791018 1.0000 80 chr1:46049138-46049218 1.0000 80 chr21:40684400-40684480 1.0000 80 chr2:43864301-43864381 1.0000 80 chr7:100825861-100825941 1.0000 80 chr19:4153523-4153603 1.0000 80 chr19:54640788-54640868 1.0000 80 chrX:46988584-46988664 1.0000 80 chr6:36165070-36165150 1.0000 80 chr12:27676964-27677044 1.0000 80 chr13:103451367-10345144 1.0000 80 chr3:42543982-42544062 1.0000 80 chr19:4471675-4471755 1.0000 80 chr1:25757220-25757300 1.0000 80 chr19:36193368-36193448 1.0000 80 chr16:31711818-31711898 1.0000 80 chr1:202830783-202830863 1.0000 80 chr9:104295764-104295844 1.0000 80 chr10:103879478-10387955 1.0000 80 chr6:112194700-112194780 1.0000 80 chr15:83478231-83478311 1.0000 80 chr14:94492614-94492694 1.0000 80 chr11:118799325-11879940 1.0000 80 chr20:34360205-34360285 1.0000 80 chr14:75530768-75530848 1.0000 80 chr22:40440687-40440767 1.0000 80 chr11:64140518-64140598 1.0000 80 chr18:59854301-59854381 1.0000 80 chr17:55740509-55740589 1.0000 80 chr6:80247179-80247259 1.0000 80 chr7:73868129-73868209 1.0000 80 chr21:44772628-44772708 1.0000 80 chr5:96144083-96144163 1.0000 80 chr11:67275734-67275814 1.0000 80 chr6:159527909-159527989 1.0000 80 chrX:128977906-128977986 1.0000 80 chr16:22385995-22386075 1.0000 80 chr7:53879628-53879708 1.0000 80 chr2:73460434-73460514 1.0000 80 chr10:104261953-10426203 1.0000 80 chr7:8008273-8008353 1.0000 80 chr19:39817094-39817174 1.0000 80 chr8:145159258-145159338 1.0000 80 chr17:76237654-76237734 1.0000 80 chr16:4316501-4316581 1.0000 80 chr19:1041097-1041177 1.0000 80 chrX:47415605-47415685 1.0000 80 chr19:13906043-13906123 1.0000 80 chr11:75526152-75526232 1.0000 80 chr22:38054460-38054540 1.0000 80 chr12:113622770-11362285 1.0000 80 chr1:53168714-53168794 1.0000 80 chr19:30370060-30370140 1.0000 80 chr20:45985523-45985603 1.0000 80 chr15:81616577-81616657 1.0000 80 chr19:18315097-18315177 1.0000 80 chr15:86338169-86338249 1.0000 80 chr19:18654400-18654480 1.0000 80 chr11:107798881-10779896 1.0000 80 chr3:126422979-126423059 1.0000 80 chr1:24742156-24742236 1.0000 80 chr18:55102460-55102540 1.0000 80 chr19:41221003-41221083 1.0000 80 chr19:2945001-2945081 1.0000 80 chr6:82957480-82957560 1.0000 80 chr14:53019434-53019514 1.0000 80 chr12:49504698-49504778 1.0000 80 chr7:75947420-75947500 1.0000 80 chr1:181003021-181003101 1.0000 80 chr10:42863501-42863581 1.0000 80 chr15:33487019-33487099 1.0000 80 chr17:4870725-4870805 1.0000 80 chr1:247171422-247171502 1.0000 80 chr1:24581429-24581509 1.0000 80 chr1:28573825-28573905 1.0000 80 chr7:856162-856242 1.0000 80 chr1:167691113-167691193 1.0000 80 chr13:20437855-20437935 1.0000 80 chr1:229339360-229339440 1.0000 80 chr11:124981504-12498158 1.0000 80 chr19:45430458-45430538 1.0000 80 chr4:175204379-175204459 1.0000 80 chr17:74667928-74668008 1.0000 80 chr14:21458019-21458099 1.0000 80 chr19:8478097-8478177 1.0000 80 chr16:27095380-27095460 1.0000 80 chr8:11660035-11660115 1.0000 80 chr6:32145962-32146042 1.0000 80 chr2:62081710-62081790 1.0000 80 chr1:109940627-109940707 1.0000 80 chr1:153940244-153940324 1.0000 80 chr8:71314379-71314459 1.0000 80 chr19:54641298-54641378 1.0000 80 chr4:89205795-89205875 1.0000 80 chr1:87794051-87794131 1.0000 80 chr8:107738252-107738332 1.0000 80 chr15:90895373-90895453 1.0000 80 chr3:152879110-152879190 1.0000 80 chr7:23053786-23053866 1.0000 80 chr19:2867197-2867277 1.0000 80 chr19:33166110-33166190 1.0000 80 chr5:149790255-149790335 1.0000 80 chr1:150669784-150669864 1.0000 80 chr22:35696167-35696247 1.0000 80 chr16:77224714-77224794 1.0000 80 chr8:25316012-25316092 1.0000 80 chr14:68286404-68286484 1.0000 80 chr5:32313297-32313377 1.0000 80 chr1:54204914-54204994 1.0000 80 chr17:58755112-58755192 1.0000 80 chr16:84300166-84300246 1.0000 80 chr2:74685280-74685360 1.0000 80 chr9:94676968-94677048 1.0000 80 chr16:4852936-4853016 1.0000 80 chr13:26795994-26796074 1.0000 80 chr9:127905874-127905954 1.0000 80 chrX:153059563-153059643 1.0000 80 chr12:8179294-8179374 1.0000 80 chr1:17445986-17446066 1.0000 80 chr19:41156326-41156406 1.0000 80 chr4:48782457-48782537 1.0000 80 chr11:62495417-62495497 1.0000 80 chr14:23938551-23938631 1.0000 80 chr5:137690762-137690842 1.0000 80 chr6:43142456-43142536 1.0000 80 chr9:96928427-96928507 1.0000 80 chr22:25631984-25632064 1.0000 80 chr17:27139546-27139626 1.0000 80 chr19:12405679-12405759 1.0000 80 chr16:16002055-16002135 1.0000 80 chr12:122028233-12202831 1.0000 80 chr2:242088903-242088983 1.0000 80 chr22:36784135-36784215 1.0000 80 chr12:49259696-49259776 1.0000 80 chr9:35072670-35072750 1.0000 80 chr19:12979731-12979811 1.0000 80 chr13:73633001-73633081 1.0000 80 chr17:79196832-79196912 1.0000 80 chr1:153895553-153895633 1.0000 80 chr3:195163918-195163998 1.0000 80 chr19:51182755-51182835 1.0000 80 chr2:73298544-73298624 1.0000 80 chr9:135905908-135905988 1.0000 80 chr7:44122225-44122305 1.0000 80 chr16:66914333-66914413 1.0000 80 chr19:8408205-8408285 1.0000 80 chr22:41347665-41347745 1.0000 80 chr5:162887471-162887551 1.0000 80 chr15:75744087-75744167 1.0000 80 chr19:45873873-45873953 1.0000 80 chr16:30382404-30382484 1.0000 80 chr19:19174404-19174484 1.0000 80 chr9:133588123-133588203 1.0000 80 chr16:67217582-67217662 1.0000 80 chr16:74729891-74729971 1.0000 80 chrX:47420479-47420559 1.0000 80 chr16:3054040-3054120 1.0000 80 chr6:160183367-160183447 1.0000 80 chr4:6271459-6271539 1.0000 80 chr6:32143891-32143971 1.0000 80 chr10:99205775-99205855 1.0000 80 chr19:42901178-42901258 1.0000 80 chr1:161195567-161195647 1.0000 80 chr19:50372863-50372943 1.0000 80 chrX:153656874-153656954 1.0000 80 chr2:24270331-24270411 1.0000 80 chr14:60714763-60714843 1.0000 80 chr20:40293406-40293486 1.0000 80 chr12:6960494-6960574 1.0000 80 chr21:43884121-43884201 1.0000 80 chr12:53473222-53473302 1.0000 80 chr5:153211684-153211764 1.0000 80 chr7:152887710-152887790 1.0000 80 chr9:139780753-139780833 1.0000 80 chr7:38217680-38217760 1.0000 80 chr4:52709137-52709217 1.0000 80 chr9:94186147-94186227 1.0000 80 chr19:2841345-2841425 1.0000 80 chr10:131909408-13190948 1.0000 80 chr12:51632973-51633053 1.0000 80 chr19:11456997-11457077 1.0000 80 chr19:40728064-40728144 1.0000 80 chr11:4629515-4629595 1.0000 80 chr15:91835064-91835144 1.0000 80 chr2:198669202-198669282 1.0000 80 chr22:37582436-37582516 1.0000 80 chr9:130007507-130007587 1.0000 80 chr11:62521619-62521699 1.0000 80 chrX:154444566-154444646 1.0000 80 chr19:12662379-12662459 1.0000 80 chr6:26033877-26033957 1.0000 80 chr1:24740271-24740351 1.0000 80 chr10:28592105-28592185 1.0000 80 chr19:13944526-13944606 1.0000 80 chr1:150601675-150601755 1.0000 80 chr19:36139065-36139145 1.0000 80 chr6:159495514-159495594 1.0000 80 chr14:21905446-21905526 1.0000 80 chr10:101190560-10119064 1.0000 80 chr19:19779524-19779604 1.0000 80 chr19:54663610-54663690 1.0000 80 chr3:119813818-119813898 1.0000 80 chr12:109535795-10953587 1.0000 80 chr20:45323368-45323448 1.0000 80 chr3:107241716-107241796 1.0000 80 chr19:36248881-36248961 1.0000 80 chr16:84224645-84224725 1.0000 80 chr3:185826924-185827004 1.0000 80 chr15:43213043-43213123 1.0000 80 chr4:124242-124322 1.0000 80 chr19:55678045-55678125 1.0000 80 chr7:100184164-100184244 1.0000 80 chr11:67121065-67121145 1.0000 80 chr20:45035321-45035401 1.0000 80 chr2:68662190-68662270 1.0000 80 chrX:3732968-3733048 1.0000 80 chr21:45175157-45175237 1.0000 80 chr2:46771263-46771343 1.0000 80 chr11:59383424-59383504 1.0000 80 chr16:2932814-2932894 1.0000 80 chr17:78244795-78244875 1.0000 80 chr22:35796024-35796104 1.0000 80 chr2:27274459-27274539 1.0000 80 chr19:11849828-11849908 1.0000 80 chr9:34329366-34329446 1.0000 80 chr11:22647384-22647464 1.0000 80 chr19:45803984-45804064 1.0000 80 chr10:17497312-17497392 1.0000 80 chr12:510666-510746 1.0000 80 chr17:41978025-41978105 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_NFYA/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/NFYA.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.204 C 0.298 G 0.295 T 0.203 Background letter frequencies (from file dataset with add-one prior applied): A 0.204 C 0.298 G 0.295 T 0.203 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCAATSRG MEME-1 width = 8 sites = 165 llr = 1206 E-value = 4.1e-125 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a8:151 pos.-specific C aa:::512 probability G :::::446 matrix T :::1a::1 bits 2.3 * 2.1 * * 1.8 * * * 1.6 ***** Relative 1.4 ***** Entropy 1.2 ***** (10.5 bits) 0.9 ***** 0.7 ***** * 0.5 ******* 0.2 ******** 0.0 -------- Multilevel CCAATCAG consensus GGC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:17497312-17497392 42 1.35e-05 atagctatag ccaatcag tttctccact chr11:59383424-59383504 19 1.35e-05 CAGATAAAGG CCAATCAG ACTTTTGGGG chr19:19779524-19779604 54 1.35e-05 GGCAAACTGT CCAATCAG GTGCGCCGGG chr1:150601675-150601755 3 1.35e-05 GG CCAATCAG GAAGAGTACA chrX:154444566-154444646 9 1.35e-05 GAGCGCAG CCAATCAG CACCTAGAGG chr22:37582436-37582516 60 1.35e-05 CGTAGACCTG CCAATCAG ATGCCAAGGT chr19:2841345-2841425 35 1.35e-05 GGGGAATTCT CCAATCAG AGTCGCCGAC chr12:53473222-53473302 5 1.35e-05 TAAG CCAATCAG CAACGGCCTC chr19:51182755-51182835 41 1.35e-05 GAAGGGACAG CCAATCAG AGTGCGCAGC chr9:35072670-35072750 1 1.35e-05 . CCAATCAG CGCCTGCCCT chr2:74685280-74685360 17 1.35e-05 ATACCGCAAG CCAATCAG CGGCAACCTT chr8:25316012-25316092 47 1.35e-05 CAGAGTCCAG CCAATCAG CACCCAGTAT chr19:2867197-2867277 6 1.35e-05 ACTGT CCAATCAG GGGAGTTGGG chr1:153940244-153940324 49 1.35e-05 TCTTCAGCTT CCAATCAG GACTCAGCTT chr2:62081710-62081790 26 1.35e-05 CAGGAATCCA CCAATCAG AAGGAGGCTC chr16:27095380-27095460 73 1.35e-05 GCCTCCTGGA CCAATCAG chr14:53019434-53019514 15 1.35e-05 AATTACGCGC CCAATCAG ATCTCGGGGC chr15:86338169-86338249 28 1.35e-05 AGAGCAGCAG CCAATCAG AGGCATCGCC chr19:18315097-18315177 39 1.35e-05 GGCGAAGTAG CCAATCAG AGATTGTCTA chr19:1041097-1041177 18 1.35e-05 GTCCTGGCAG CCAATCAG ATGCGAGGAC chr14:75530768-75530848 32 1.35e-05 CTCCAGCTGA CCAATCAG AGACGGCGCC chr20:34360205-34360285 46 1.35e-05 GCGGCTGCCG CCAATCAg cgccgcccga chr16:31711818-31711898 43 1.35e-05 TCGAGCCTGT CCAATCAG GCGCGCAGCC chr12:27676964-27677044 23 1.35e-05 TTCCCCGGCT CCAATCAg cgggcgcgca chr19:4153523-4153603 40 1.35e-05 ACCCTGTCCA CCAATCAG CACCTGGAGG chr1:207996110-207996190 47 1.35e-05 GGCCCACCCA CCAATCAG AGGAAGTGTC chr19:40728064-40728144 31 2.68e-05 CGGAATTCGA CCAATGAG GGCAGAGAGC chr5:153211684-153211764 61 2.68e-05 ctgagtttag ccaatgag agatgagcag chr3:195163918-195163998 6 2.68e-05 CCGAG CCAATGAG CAGCGCGACC chr19:12979731-12979811 43 2.68e-05 CCAGGCTGGA CCAATGAG AGGCTGCTCT chr16:16002055-16002135 35 2.68e-05 ctcagaaggg ccaatgag gctcaaaccc chr19:33166110-33166190 26 2.68e-05 CACAGCTGAC CCAATGAG AAACCGTCGT chr7:23053786-23053866 68 2.68e-05 AACTTCTCCA CCAATGAG AATCT chr3:152879110-152879190 41 2.68e-05 CGCCCCGAGA CCAATGAG TGCAGAGTCT chr8:11660035-11660115 1 2.68e-05 . CCAATGAG CTTCTAGAGT chr1:167691113-167691193 61 2.68e-05 TGCGGGCAGG CCAATGAG CGGACAGCGA chr19:30370060-30370140 23 2.68e-05 gaatggccaa ccaatgag ggcacagaag chr12:113622770-11362285 47 2.68e-05 CAGGAGGCAG CCAATGAG AGACGCGCGA chr11:75526152-75526232 58 2.68e-05 GAGGGCTAAG CCAATGAG CGCTCCGGGT chr19:1790938-1791018 58 2.68e-05 cccaggctca ccaatgag agccagccct chr3:149530910-149530990 59 2.68e-05 TGGGTGCGGA CCAATGAG GCGCGTGGGG chr21:34494586-34494666 24 2.68e-05 CCTCTAGCAA CCAATGAG ATTGAGGAAA chr3:100211352-100211432 47 2.68e-05 GCTGCGGCCA CCAATGAG CTGGGGCTTG chr19:3344313-3344393 40 2.68e-05 TATGTCCTGG CCAATGAG AATGCCCCAG chr19:46148909-46148989 14 2.68e-05 CCGTTCAGAA CCAATGAG AGCCTGTCGC chr19:13944526-13944606 57 4.62e-05 CTCGAGTGGG CCAATCGG AGACGGCCCC chr9:139780753-139780833 3 4.62e-05 GA CCAATCGG CGCACGCTGC chr19:45873873-45873953 72 4.62e-05 TAGGGCAGAG CCAATCGG G chrX:153059563-153059643 49 4.62e-05 GGGCCCCTAG CCAATCGG ACTCCAGACT chr13:26795994-26796074 49 4.62e-05 AGGCAGTTAA CCAATCGG AGAAGAGATG chr9:104295764-104295844 27 4.62e-05 GGACCGTCAG CCAATCGG CCGTCTGAAC chr17:41978025-41978105 17 6.55e-05 GAGGAACCAG CCAATGGG AAGGCTCAGC chr22:35796024-35796104 59 6.55e-05 CTCCGGCGAA CCAATGGG AGCGCAGCGG chr19:55678045-55678125 41 6.55e-05 AAACTTTTGG CCAATGGG AGCACTGAGG chr12:109535795-10953587 6 6.55e-05 GCCAG CCAATGGG AACGCGTCTC chr6:26033877-26033957 51 6.55e-05 TGTCAAATAC CCAATGGG AAATCAGAAT chr14:60714763-60714843 35 6.55e-05 GGCACCCCAG CCAATGGG AACCCGTGCT chr16:74729891-74729971 34 6.55e-05 ctagttctca ccaatggg gtttaagtgc chr9:133588123-133588203 26 6.55e-05 CTCCCACCGG CCAATGGG ACGGAGGAAA chr16:30382404-30382484 42 6.55e-05 GCTGTCTCAG CCAATGGG AGCATCCAAA chr2:73298544-73298624 24 6.55e-05 GCCCCGTTGA CCAATGGG AAAAGGGTGA chr9:96928427-96928507 41 6.55e-05 GACGGCTTCA CCAATGGG CTTGCGCGCT chr6:43142456-43142536 8 6.55e-05 TGACTGG CCAATGGG AGGAAGCGGC chr16:84300166-84300246 8 6.55e-05 attgtgg ccaatggg atgttagtgg chr6:36165070-36165150 39 6.55e-05 GGTGACGCAG CCAATGGG TTCTCGCCTC chr13:20532721-20532801 39 6.55e-05 GCCGTCGGAG CCAATGGG CGTGCCCGAA chr11:4629515-4629595 34 7.91e-05 GTGGGGGCAG CCAATCAC AGGCAGGGAC chr22:41347665-41347745 34 7.91e-05 GGCTAAGGGG CCAATCAC AGAGCTGCTT chr12:49259696-49259776 1 7.91e-05 . CCAATCAC AAGAGGAGGC chr19:41156326-41156406 17 7.91e-05 catgcaagag ccaatcac tgtgatcgga chr9:94676968-94677048 31 7.91e-05 TCACAGACAA CCAATCAC TGACAAAGGC chr1:53168714-53168794 14 7.91e-05 AGAGACCGGA CCAATCAC GTTTGCTGTG chr7:8008273-8008353 36 7.91e-05 TATTCCAGAA CCAATCAC TCGAGTTCTA chr11:64140518-64140598 19 7.91e-05 ccacactgaa ccaatcac tgtggccagg chr9:101049834-101049914 53 7.91e-05 tattcctgaa ccaatcac tgtgtccggg chrX:3732968-3733048 63 1.21e-04 AAGATCCTGT CCAATCGC TACCGGGAAC chr19:36248881-36248961 7 1.21e-04 GGTTCT CCAATCAA ACACGCCCTG chr9:94186147-94186227 36 1.21e-04 GGCCGCGGCC CCAATcgc cgcgcccgca chr1:161195567-161195647 32 1.21e-04 TAAGGGGCCA CCAATCAA GTCCTGCCCG chr2:242088903-242088983 1 1.21e-04 . CCAATCGC ACAGCGACTA chr5:137690762-137690842 26 1.21e-04 CAACTGTCTT CCAATCAA AAGTGTTCTT chr12:8179294-8179374 33 1.21e-04 ACCAACGCAG CCAATCAA CAAGCGATCT chr1:54204914-54204994 57 1.21e-04 CCGGCTCAGG CCAATCGC GGCGCGAGGG chr16:22385995-22386075 36 1.21e-04 GGGACTTCGT CCAATCGC CTCTCTCCAA chr16:2932814-2932894 2 1.50e-04 A CCAATGGC GCGGATGAGG chr11:67121065-67121145 22 1.50e-04 AAGACTTCAG CCAATGGC AGGCCGCCTA chr3:107241716-107241796 45 1.50e-04 ACTGCGCGGG CCAATGGC AGGCTGCCTT chr1:24740271-24740351 4 1.50e-04 CAG CCAATGGC ATCCTCTGTT chr1:150669784-150669864 36 1.50e-04 GCTGGTCAAT CCAATGAA GGAACCTTGG chr19:41221003-41221083 45 1.50e-04 GGCCAGCCAA CCAATGGC GCGGCAGCAA chr19:4471675-4471755 9 1.50e-04 TTCGATAG CCAATGGC CGACGTTCCC chr14:90920811-90920891 35 1.50e-04 GGACCGGCAG CCAATGAA GGTGAAGGCC chr17:47270312-47270392 38 1.50e-04 GCCTGAGCCG CCAATGAA GTGGCGCGAC chr19:54663610-54663690 57 1.69e-04 CAGATCTGAA CCAATCAT AAGTTGGCCC chrX:47420479-47420559 41 1.69e-04 TGACCCTGAC CCAATAAG GGTGGAAGGC chr16:67217582-67217662 38 1.69e-04 TGACCTGCAG CCAATAAG TGGTGGGGGA chr17:55740509-55740589 66 1.69e-04 GGCTTCTTGG CCAATCAT CCTGCAG chr18:59854301-59854381 32 1.69e-04 CCTTCTCTGA CCAATCAT GGAGGAGTCG chr7:100825861-100825941 13 2.05e-04 GTTCCATCAG CCATTCAG AATTAAAAGT chr7:100184164-100184244 16 2.40e-04 GTCAAGAAGG CCAATTAG AGCCTCCGAA chr4:124242-124322 63 2.40e-04 ACAGCTCTAT CCAATTAG AGCGCTGGAT chr12:51632973-51633053 41 2.40e-04 TTCGCGTAGG CCAATGGA GAGCCGGCGG chr7:73868129-73868209 1 2.40e-04 . CCAATGGA GGGTGGTGTT chr22:40440687-40440767 58 2.40e-04 CTCCCTGCGG CCAATGGA GTGGGGCTCT chr9:34329366-34329446 50 2.67e-04 CGACCTTCAG CCAATCGT TCCGCTTGAG chr2:27274459-27274539 46 2.67e-04 GCAGCCACGG CCAATAGG CGAGAGACTT chr4:52709137-52709217 14 2.67e-04 GGCCCCAGGA CCAATCGT ATTGGCCAGT chr7:38217680-38217760 70 2.67e-04 TGTCATCTGG CCAATAGG TTG chr6:32143891-32143971 54 2.67e-04 GCCTGTTTTG CCAATCGT CTCCCAGAAA chr1:24581429-24581509 39 2.67e-04 GAGGCTCTGT CCAATAGG AGAGCTCAAT chr3:126422979-126423059 54 2.67e-04 CTGGCGTCGG CCAATAGG ACGTGGCTTT chr19:54641298-54641378 11 3.00e-04 GAGCGATCAC CCAATCCG CGAAAGGGGG chr22:40440218-40440298 7 3.00e-04 GTCAAA CCAATGGT ATTAGCCCTT chr2:68662190-68662270 38 3.81e-04 GCCATCAGAG CCAATTGG CCTACTGGTT chr16:66914333-66914413 9 3.81e-04 CTCTTTAG CCATTGGG CAATACCTCT chr11:62495417-62495497 63 3.81e-04 CCGGATTTTT CCAATTGG CGAAGCTGCC chr6:159527909-159527989 53 3.81e-04 tagcgggtaa ccaattgg aggcctctaa chr20:40247079-40247159 13 3.81e-04 CCCTGTCGCG CCATTGGG CTTCGCCGGT chrX:153656874-153656954 36 4.17e-04 TGCACTTGGT CCAATTAC CTGCGGCCCT chr21:43884121-43884201 62 4.50e-04 caggtgtagg ccaatctg cttacacctc chr2:198669202-198669282 69 4.83e-04 CAGACGCCTG CCAATCCC CAAG chr19:50372863-50372943 48 4.83e-04 ACTCAGCGAG CCAATCCC TTAATAGAAG chr19:19174404-19174484 29 4.83e-04 GGCTTTGCGG CCAATCCC GGTCTCCCCC chr22:35696167-35696247 68 4.83e-04 CACGGCGCAG CCAATGTG CGTCT chr6:32145962-32146042 54 4.83e-04 CGAGTTATTA CCAATCCC TTGGCATTGC chr1:229339360-229339440 44 4.83e-04 GTCATTGCTT CCAATGTG GAATCTCATT chr19:45803984-45804064 66 5.50e-04 cattcctaaa ccaatgcc tgcagcc chr15:91835064-91835144 67 5.50e-04 tgctcagcag caaatcag tctggg chr11:124981504-12498158 68 5.50e-04 TTAAGATTCA CTAATCAG CGTTG chr16:84314805-84314885 46 5.50e-04 ctcattggtc caaatcag atgacagact chr3:185826924-185827004 22 6.23e-04 CCGCCCGCCG CCATTGGC CCGCGGCCCT chr16:84224645-84224725 10 6.23e-04 CTGGCCTTC CCATTGGC AGGGTGCACT chr9:127905874-127905954 3 6.23e-04 TC CCATTGGC TAGAGCAGTA chr13:20437855-20437935 33 6.23e-04 TTGGGCACGC CCATTGGC TCCGACGGCC chr7:75947420-75947500 32 6.23e-04 AACAGTCCGA CCATTGGC GGAGCGGGGA chr19:18654400-18654480 7 6.23e-04 CCGTGC CCATTGGC CGCCGCTGCC chr6:80247179-80247259 16 6.23e-04 ACCCGAGCTC CCATTGGC TTCTGTCTCC chr6:112194700-112194780 60 6.23e-04 CGAGCCGCAA CCATTGGC GCCTGGGGCG chr3:42543982-42544062 57 6.23e-04 CTCCACCCAT CCATTGGC TAGATCCGCC chr2:43864301-43864381 52 6.23e-04 CTGTGGTCTC CCATTGGC TACACCGGCT chr14:23755428-23755508 8 6.23e-04 GGGCTGG CCATTGGC TGCGTGGGTC chr6:43796607-43796687 48 6.23e-04 ACAACTGGCC CTAATGAG CTCATTGGGG chr10:102790910-10279099 51 6.23e-04 CCCCGGGCTC CCATTGGC TGGTAGGGCC chr19:42901178-42901258 5 6.42e-04 TGGG CCACTCAG GACCCTTTGC chr4:6271459-6271539 29 6.42e-04 GCTACACCGG CCACTCAG CAGGCCGAGC chr8:107738252-107738332 22 6.42e-04 TTTACAGCCT CCACTCAG GACTATCATT chr7:53879628-53879708 72 6.42e-04 tcccagtcac ccactcag c chr19:36139065-36139145 34 6.89e-04 AGCATTTAGC CCAATAGA AAGTCGTAGT chr7:152887710-152887790 48 6.89e-04 tgctctctag ccaataga atgcaagtga chr5:32313297-32313377 48 7.18e-04 TTTCCTCCAA CCAATCCA GAGAGCGTTC chr10:101190560-10119064 20 7.92e-04 AATGATGCAA CCAATGCA ATTTCCTCCG chr19:8408205-8408285 3 7.92e-04 AG CCAACCAG CACCCGAGGC chr5:149790255-149790335 20 7.92e-04 AAGTCAGGAG CCAACCAG AGCTAGCAGG chr20:45985523-45985603 25 7.92e-04 GCTGCCCCGG CAAATCGG AGTGTAAAGC chr19:17400502-17400582 20 7.92e-04 GGCGGTTTAG CCAACCAG GTCCCCCAGG chr17:4870725-4870805 37 8.92e-04 GGACGGCCGG CTAATGGG AAACAAGGAC chr5:96144083-96144163 30 8.92e-04 CGTTCGACGC CCATTGGA CTCGCTGGGT chr14:23938551-23938631 8 9.60e-04 ACGGGAG CCAATACG CGCTAAGTTC chr1:46049138-46049218 51 9.60e-04 TCAGCTGTAG CCAATCCT AGAACAAAAT chr12:510666-510746 46 1.11e-03 AAGGCCCTTC CCATTGGT GCGCATTCCA chr20:40293406-40293486 11 1.11e-03 caaaatgctc ccattggt cagaacttag chrX:128977906-128977986 55 1.11e-03 TCCCGAACTG CCATTGGT TTTGCCTAAC chr14:21905446-21905526 33 1.19e-03 AAGCGCACTG CCACTCAC CAAAGGCGAA chr15:75744087-75744167 44 1.34e-03 AAAGACTCAG CCAACCAC CGAGGCCTGT chr3:119813818-119813898 43 1.61e-03 GACAGTCTGG CCAGTCAG GACTTCCCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:17497312-17497392 1.3e-05 41_[+1]_31 chr11:59383424-59383504 1.3e-05 18_[+1]_54 chr19:19779524-19779604 1.3e-05 53_[+1]_19 chr1:150601675-150601755 1.3e-05 2_[+1]_70 chrX:154444566-154444646 1.3e-05 8_[+1]_64 chr22:37582436-37582516 1.3e-05 59_[+1]_13 chr19:2841345-2841425 1.3e-05 34_[+1]_38 chr12:53473222-53473302 1.3e-05 4_[+1]_68 chr19:51182755-51182835 1.3e-05 40_[+1]_32 chr9:35072670-35072750 1.3e-05 [+1]_72 chr2:74685280-74685360 1.3e-05 16_[+1]_56 chr8:25316012-25316092 1.3e-05 46_[+1]_26 chr19:2867197-2867277 1.3e-05 5_[+1]_67 chr1:153940244-153940324 1.3e-05 48_[+1]_24 chr2:62081710-62081790 1.3e-05 25_[+1]_47 chr16:27095380-27095460 1.3e-05 72_[+1] chr14:53019434-53019514 1.3e-05 14_[+1]_58 chr15:86338169-86338249 1.3e-05 27_[+1]_45 chr19:18315097-18315177 1.3e-05 38_[+1]_34 chr19:1041097-1041177 1.3e-05 17_[+1]_55 chr14:75530768-75530848 1.3e-05 31_[+1]_41 chr20:34360205-34360285 1.3e-05 45_[+1]_27 chr16:31711818-31711898 1.3e-05 42_[+1]_30 chr12:27676964-27677044 1.3e-05 22_[+1]_50 chr19:4153523-4153603 1.3e-05 39_[+1]_33 chr1:207996110-207996190 1.3e-05 46_[+1]_26 chr19:40728064-40728144 2.7e-05 30_[+1]_42 chr5:153211684-153211764 2.7e-05 60_[+1]_12 chr3:195163918-195163998 2.7e-05 5_[+1]_67 chr19:12979731-12979811 2.7e-05 42_[+1]_30 chr16:16002055-16002135 2.7e-05 34_[+1]_38 chr19:33166110-33166190 2.7e-05 25_[+1]_47 chr7:23053786-23053866 2.7e-05 67_[+1]_5 chr3:152879110-152879190 2.7e-05 40_[+1]_32 chr8:11660035-11660115 2.7e-05 [+1]_72 chr1:167691113-167691193 2.7e-05 60_[+1]_12 chr19:30370060-30370140 2.7e-05 22_[+1]_50 chr12:113622770-11362285 2.7e-05 46_[+1]_26 chr11:75526152-75526232 2.7e-05 57_[+1]_15 chr19:1790938-1791018 2.7e-05 57_[+1]_15 chr3:149530910-149530990 2.7e-05 58_[+1]_14 chr21:34494586-34494666 2.7e-05 23_[+1]_49 chr3:100211352-100211432 2.7e-05 46_[+1]_26 chr19:3344313-3344393 2.7e-05 39_[+1]_33 chr19:46148909-46148989 2.7e-05 13_[+1]_59 chr19:13944526-13944606 4.6e-05 56_[+1]_16 chr9:139780753-139780833 4.6e-05 2_[+1]_70 chr19:45873873-45873953 4.6e-05 71_[+1]_1 chrX:153059563-153059643 4.6e-05 48_[+1]_24 chr13:26795994-26796074 4.6e-05 48_[+1]_24 chr9:104295764-104295844 4.6e-05 26_[+1]_46 chr17:41978025-41978105 6.5e-05 16_[+1]_56 chr22:35796024-35796104 6.5e-05 58_[+1]_14 chr19:55678045-55678125 6.5e-05 40_[+1]_32 chr12:109535795-10953587 6.5e-05 5_[+1]_67 chr6:26033877-26033957 6.5e-05 50_[+1]_22 chr14:60714763-60714843 6.5e-05 34_[+1]_38 chr16:74729891-74729971 6.5e-05 33_[+1]_39 chr9:133588123-133588203 6.5e-05 25_[+1]_47 chr16:30382404-30382484 6.5e-05 41_[+1]_31 chr2:73298544-73298624 6.5e-05 23_[+1]_49 chr9:96928427-96928507 6.5e-05 40_[+1]_32 chr6:43142456-43142536 6.5e-05 7_[+1]_65 chr16:84300166-84300246 6.5e-05 7_[+1]_65 chr6:36165070-36165150 6.5e-05 38_[+1]_34 chr13:20532721-20532801 6.5e-05 38_[+1]_34 chr11:4629515-4629595 7.9e-05 33_[+1]_39 chr22:41347665-41347745 7.9e-05 33_[+1]_39 chr12:49259696-49259776 7.9e-05 [+1]_72 chr19:41156326-41156406 7.9e-05 16_[+1]_56 chr9:94676968-94677048 7.9e-05 30_[+1]_42 chr1:53168714-53168794 7.9e-05 13_[+1]_59 chr7:8008273-8008353 7.9e-05 35_[+1]_37 chr11:64140518-64140598 7.9e-05 18_[+1]_54 chr9:101049834-101049914 7.9e-05 52_[+1]_20 chrX:3732968-3733048 0.00012 62_[+1]_10 chr19:36248881-36248961 0.00012 6_[+1]_66 chr9:94186147-94186227 0.00012 35_[+1]_37 chr1:161195567-161195647 0.00012 31_[+1]_41 chr2:242088903-242088983 0.00012 [+1]_72 chr5:137690762-137690842 0.00012 25_[+1]_47 chr12:8179294-8179374 0.00012 32_[+1]_40 chr1:54204914-54204994 0.00012 56_[+1]_16 chr16:22385995-22386075 0.00012 35_[+1]_37 chr16:2932814-2932894 0.00015 1_[+1]_71 chr11:67121065-67121145 0.00015 21_[+1]_51 chr3:107241716-107241796 0.00015 44_[+1]_28 chr1:24740271-24740351 0.00015 3_[+1]_69 chr1:150669784-150669864 0.00015 35_[+1]_37 chr19:41221003-41221083 0.00015 44_[+1]_28 chr19:4471675-4471755 0.00015 8_[+1]_64 chr14:90920811-90920891 0.00015 34_[+1]_38 chr17:47270312-47270392 0.00015 37_[+1]_35 chr19:54663610-54663690 0.00017 56_[+1]_16 chrX:47420479-47420559 0.00017 40_[+1]_32 chr16:67217582-67217662 0.00017 37_[+1]_35 chr17:55740509-55740589 0.00017 65_[+1]_7 chr18:59854301-59854381 0.00017 31_[+1]_41 chr7:100825861-100825941 0.0002 12_[+1]_60 chr7:100184164-100184244 0.00024 15_[+1]_57 chr4:124242-124322 0.00024 62_[+1]_10 chr12:51632973-51633053 0.00024 40_[+1]_32 chr7:73868129-73868209 0.00024 [+1]_72 chr22:40440687-40440767 0.00024 57_[+1]_15 chr9:34329366-34329446 0.00027 49_[+1]_23 chr2:27274459-27274539 0.00027 45_[+1]_27 chr4:52709137-52709217 0.00027 13_[+1]_59 chr7:38217680-38217760 0.00027 69_[+1]_3 chr6:32143891-32143971 0.00027 53_[+1]_19 chr1:24581429-24581509 0.00027 38_[+1]_34 chr3:126422979-126423059 0.00027 53_[+1]_19 chr19:54641298-54641378 0.0003 10_[+1]_62 chr22:40440218-40440298 0.0003 6_[+1]_66 chr2:68662190-68662270 0.00038 37_[+1]_35 chr16:66914333-66914413 0.00038 8_[+1]_64 chr11:62495417-62495497 0.00038 62_[+1]_10 chr6:159527909-159527989 0.00038 52_[+1]_20 chr20:40247079-40247159 0.00038 12_[+1]_60 chrX:153656874-153656954 0.00042 35_[+1]_37 chr21:43884121-43884201 0.00045 61_[+1]_11 chr2:198669202-198669282 0.00048 68_[+1]_4 chr19:50372863-50372943 0.00048 47_[+1]_25 chr19:19174404-19174484 0.00048 28_[+1]_44 chr22:35696167-35696247 0.00048 67_[+1]_5 chr6:32145962-32146042 0.00048 53_[+1]_19 chr1:229339360-229339440 0.00048 43_[+1]_29 chr19:45803984-45804064 0.00055 65_[+1]_7 chr15:91835064-91835144 0.00055 66_[+1]_6 chr11:124981504-12498158 0.00055 67_[+1]_5 chr16:84314805-84314885 0.00055 45_[+1]_27 chr3:185826924-185827004 0.00062 21_[+1]_51 chr16:84224645-84224725 0.00062 9_[+1]_63 chr9:127905874-127905954 0.00062 2_[+1]_70 chr13:20437855-20437935 0.00062 32_[+1]_40 chr7:75947420-75947500 0.00062 31_[+1]_41 chr19:18654400-18654480 0.00062 6_[+1]_66 chr6:80247179-80247259 0.00062 15_[+1]_57 chr6:112194700-112194780 0.00062 59_[+1]_13 chr3:42543982-42544062 0.00062 56_[+1]_16 chr2:43864301-43864381 0.00062 51_[+1]_21 chr14:23755428-23755508 0.00062 7_[+1]_65 chr6:43796607-43796687 0.00062 47_[+1]_25 chr10:102790910-10279099 0.00062 50_[+1]_22 chr19:42901178-42901258 0.00064 4_[+1]_68 chr4:6271459-6271539 0.00064 28_[+1]_44 chr8:107738252-107738332 0.00064 21_[+1]_51 chr7:53879628-53879708 0.00064 71_[+1]_1 chr19:36139065-36139145 0.00069 33_[+1]_39 chr7:152887710-152887790 0.00069 47_[+1]_25 chr5:32313297-32313377 0.00072 47_[+1]_25 chr10:101190560-10119064 0.00079 19_[+1]_53 chr19:8408205-8408285 0.00079 2_[+1]_70 chr5:149790255-149790335 0.00079 19_[+1]_53 chr20:45985523-45985603 0.00079 24_[+1]_48 chr19:17400502-17400582 0.00079 19_[+1]_53 chr17:4870725-4870805 0.00089 36_[+1]_36 chr5:96144083-96144163 0.00089 29_[+1]_43 chr14:23938551-23938631 0.00096 7_[+1]_65 chr1:46049138-46049218 0.00096 50_[+1]_22 chr12:510666-510746 0.0011 45_[+1]_27 chr20:40293406-40293486 0.0011 10_[+1]_62 chrX:128977906-128977986 0.0011 54_[+1]_18 chr14:21905446-21905526 0.0012 32_[+1]_40 chr15:75744087-75744167 0.0013 43_[+1]_29 chr3:119813818-119813898 0.0016 42_[+1]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAATSRG width=8 seqs=165 chr10:17497312-17497392 ( 42) CCAATCAG 1 chr11:59383424-59383504 ( 19) CCAATCAG 1 chr19:19779524-19779604 ( 54) CCAATCAG 1 chr1:150601675-150601755 ( 3) CCAATCAG 1 chrX:154444566-154444646 ( 9) CCAATCAG 1 chr22:37582436-37582516 ( 60) CCAATCAG 1 chr19:2841345-2841425 ( 35) CCAATCAG 1 chr12:53473222-53473302 ( 5) CCAATCAG 1 chr19:51182755-51182835 ( 41) CCAATCAG 1 chr9:35072670-35072750 ( 1) CCAATCAG 1 chr2:74685280-74685360 ( 17) CCAATCAG 1 chr8:25316012-25316092 ( 47) CCAATCAG 1 chr19:2867197-2867277 ( 6) CCAATCAG 1 chr1:153940244-153940324 ( 49) CCAATCAG 1 chr2:62081710-62081790 ( 26) CCAATCAG 1 chr16:27095380-27095460 ( 73) CCAATCAG 1 chr14:53019434-53019514 ( 15) CCAATCAG 1 chr15:86338169-86338249 ( 28) CCAATCAG 1 chr19:18315097-18315177 ( 39) CCAATCAG 1 chr19:1041097-1041177 ( 18) CCAATCAG 1 chr14:75530768-75530848 ( 32) CCAATCAG 1 chr20:34360205-34360285 ( 46) CCAATCAG 1 chr16:31711818-31711898 ( 43) CCAATCAG 1 chr12:27676964-27677044 ( 23) CCAATCAG 1 chr19:4153523-4153603 ( 40) CCAATCAG 1 chr1:207996110-207996190 ( 47) CCAATCAG 1 chr19:40728064-40728144 ( 31) CCAATGAG 1 chr5:153211684-153211764 ( 61) CCAATGAG 1 chr3:195163918-195163998 ( 6) CCAATGAG 1 chr19:12979731-12979811 ( 43) CCAATGAG 1 chr16:16002055-16002135 ( 35) CCAATGAG 1 chr19:33166110-33166190 ( 26) CCAATGAG 1 chr7:23053786-23053866 ( 68) CCAATGAG 1 chr3:152879110-152879190 ( 41) CCAATGAG 1 chr8:11660035-11660115 ( 1) CCAATGAG 1 chr1:167691113-167691193 ( 61) CCAATGAG 1 chr19:30370060-30370140 ( 23) CCAATGAG 1 chr12:113622770-11362285 ( 47) CCAATGAG 1 chr11:75526152-75526232 ( 58) CCAATGAG 1 chr19:1790938-1791018 ( 58) CCAATGAG 1 chr3:149530910-149530990 ( 59) CCAATGAG 1 chr21:34494586-34494666 ( 24) CCAATGAG 1 chr3:100211352-100211432 ( 47) CCAATGAG 1 chr19:3344313-3344393 ( 40) CCAATGAG 1 chr19:46148909-46148989 ( 14) CCAATGAG 1 chr19:13944526-13944606 ( 57) CCAATCGG 1 chr9:139780753-139780833 ( 3) CCAATCGG 1 chr19:45873873-45873953 ( 72) CCAATCGG 1 chrX:153059563-153059643 ( 49) CCAATCGG 1 chr13:26795994-26796074 ( 49) CCAATCGG 1 chr9:104295764-104295844 ( 27) CCAATCGG 1 chr17:41978025-41978105 ( 17) CCAATGGG 1 chr22:35796024-35796104 ( 59) CCAATGGG 1 chr19:55678045-55678125 ( 41) CCAATGGG 1 chr12:109535795-10953587 ( 6) CCAATGGG 1 chr6:26033877-26033957 ( 51) CCAATGGG 1 chr14:60714763-60714843 ( 35) CCAATGGG 1 chr16:74729891-74729971 ( 34) CCAATGGG 1 chr9:133588123-133588203 ( 26) CCAATGGG 1 chr16:30382404-30382484 ( 42) CCAATGGG 1 chr2:73298544-73298624 ( 24) CCAATGGG 1 chr9:96928427-96928507 ( 41) CCAATGGG 1 chr6:43142456-43142536 ( 8) CCAATGGG 1 chr16:84300166-84300246 ( 8) CCAATGGG 1 chr6:36165070-36165150 ( 39) CCAATGGG 1 chr13:20532721-20532801 ( 39) CCAATGGG 1 chr11:4629515-4629595 ( 34) CCAATCAC 1 chr22:41347665-41347745 ( 34) CCAATCAC 1 chr12:49259696-49259776 ( 1) CCAATCAC 1 chr19:41156326-41156406 ( 17) CCAATCAC 1 chr9:94676968-94677048 ( 31) CCAATCAC 1 chr1:53168714-53168794 ( 14) CCAATCAC 1 chr7:8008273-8008353 ( 36) CCAATCAC 1 chr11:64140518-64140598 ( 19) CCAATCAC 1 chr9:101049834-101049914 ( 53) CCAATCAC 1 chrX:3732968-3733048 ( 63) CCAATCGC 1 chr19:36248881-36248961 ( 7) CCAATCAA 1 chr9:94186147-94186227 ( 36) CCAATCGC 1 chr1:161195567-161195647 ( 32) CCAATCAA 1 chr2:242088903-242088983 ( 1) CCAATCGC 1 chr5:137690762-137690842 ( 26) CCAATCAA 1 chr12:8179294-8179374 ( 33) CCAATCAA 1 chr1:54204914-54204994 ( 57) CCAATCGC 1 chr16:22385995-22386075 ( 36) CCAATCGC 1 chr16:2932814-2932894 ( 2) CCAATGGC 1 chr11:67121065-67121145 ( 22) CCAATGGC 1 chr3:107241716-107241796 ( 45) CCAATGGC 1 chr1:24740271-24740351 ( 4) CCAATGGC 1 chr1:150669784-150669864 ( 36) CCAATGAA 1 chr19:41221003-41221083 ( 45) CCAATGGC 1 chr19:4471675-4471755 ( 9) CCAATGGC 1 chr14:90920811-90920891 ( 35) CCAATGAA 1 chr17:47270312-47270392 ( 38) CCAATGAA 1 chr19:54663610-54663690 ( 57) CCAATCAT 1 chrX:47420479-47420559 ( 41) CCAATAAG 1 chr16:67217582-67217662 ( 38) CCAATAAG 1 chr17:55740509-55740589 ( 66) CCAATCAT 1 chr18:59854301-59854381 ( 32) CCAATCAT 1 chr7:100825861-100825941 ( 13) CCATTCAG 1 chr7:100184164-100184244 ( 16) CCAATTAG 1 chr4:124242-124322 ( 63) CCAATTAG 1 chr12:51632973-51633053 ( 41) CCAATGGA 1 chr7:73868129-73868209 ( 1) CCAATGGA 1 chr22:40440687-40440767 ( 58) CCAATGGA 1 chr9:34329366-34329446 ( 50) CCAATCGT 1 chr2:27274459-27274539 ( 46) CCAATAGG 1 chr4:52709137-52709217 ( 14) CCAATCGT 1 chr7:38217680-38217760 ( 70) CCAATAGG 1 chr6:32143891-32143971 ( 54) CCAATCGT 1 chr1:24581429-24581509 ( 39) CCAATAGG 1 chr3:126422979-126423059 ( 54) CCAATAGG 1 chr19:54641298-54641378 ( 11) CCAATCCG 1 chr22:40440218-40440298 ( 7) CCAATGGT 1 chr2:68662190-68662270 ( 38) CCAATTGG 1 chr16:66914333-66914413 ( 9) CCATTGGG 1 chr11:62495417-62495497 ( 63) CCAATTGG 1 chr6:159527909-159527989 ( 53) CCAATTGG 1 chr20:40247079-40247159 ( 13) CCATTGGG 1 chrX:153656874-153656954 ( 36) CCAATTAC 1 chr21:43884121-43884201 ( 62) CCAATCTG 1 chr2:198669202-198669282 ( 69) CCAATCCC 1 chr19:50372863-50372943 ( 48) CCAATCCC 1 chr19:19174404-19174484 ( 29) CCAATCCC 1 chr22:35696167-35696247 ( 68) CCAATGTG 1 chr6:32145962-32146042 ( 54) CCAATCCC 1 chr1:229339360-229339440 ( 44) CCAATGTG 1 chr19:45803984-45804064 ( 66) CCAATGCC 1 chr15:91835064-91835144 ( 67) CAAATCAG 1 chr11:124981504-12498158 ( 68) CTAATCAG 1 chr16:84314805-84314885 ( 46) CAAATCAG 1 chr3:185826924-185827004 ( 22) CCATTGGC 1 chr16:84224645-84224725 ( 10) CCATTGGC 1 chr9:127905874-127905954 ( 3) CCATTGGC 1 chr13:20437855-20437935 ( 33) CCATTGGC 1 chr7:75947420-75947500 ( 32) CCATTGGC 1 chr19:18654400-18654480 ( 7) CCATTGGC 1 chr6:80247179-80247259 ( 16) CCATTGGC 1 chr6:112194700-112194780 ( 60) CCATTGGC 1 chr3:42543982-42544062 ( 57) CCATTGGC 1 chr2:43864301-43864381 ( 52) CCATTGGC 1 chr14:23755428-23755508 ( 8) CCATTGGC 1 chr6:43796607-43796687 ( 48) CTAATGAG 1 chr10:102790910-10279099 ( 51) CCATTGGC 1 chr19:42901178-42901258 ( 5) CCACTCAG 1 chr4:6271459-6271539 ( 29) CCACTCAG 1 chr8:107738252-107738332 ( 22) CCACTCAG 1 chr7:53879628-53879708 ( 72) CCACTCAG 1 chr19:36139065-36139145 ( 34) CCAATAGA 1 chr7:152887710-152887790 ( 48) CCAATAGA 1 chr5:32313297-32313377 ( 48) CCAATCCA 1 chr10:101190560-10119064 ( 20) CCAATGCA 1 chr19:8408205-8408285 ( 3) CCAACCAG 1 chr5:149790255-149790335 ( 20) CCAACCAG 1 chr20:45985523-45985603 ( 25) CAAATCGG 1 chr19:17400502-17400582 ( 20) CCAACCAG 1 chr17:4870725-4870805 ( 37) CTAATGGG 1 chr5:96144083-96144163 ( 30) CCATTGGA 1 chr14:23938551-23938631 ( 8) CCAATACG 1 chr1:46049138-46049218 ( 51) CCAATCCT 1 chr12:510666-510746 ( 46) CCATTGGT 1 chr20:40293406-40293486 ( 11) CCATTGGT 1 chrX:128977906-128977986 ( 55) CCATTGGT 1 chr14:21905446-21905526 ( 33) CCACTCAC 1 chr15:75744087-75744167 ( 44) CCAACCAC 1 chr3:119813818-119813898 ( 43) CCAGTCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.75319 E= 4.1e-125 -1401 175 -1401 -1401 -349 169 -1401 -348 229 -1401 -1401 -1401 205 -330 -560 -82 -1401 -362 -1401 227 -190 68 54 -248 132 -230 48 -348 -117 -30 102 -160 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 165 E= 4.1e-125 0.000000 1.000000 0.000000 0.000000 0.018182 0.963636 0.000000 0.018182 1.000000 0.000000 0.000000 0.000000 0.848485 0.030303 0.006061 0.115152 0.000000 0.024242 0.000000 0.975758 0.054545 0.478788 0.430303 0.036364 0.509091 0.060606 0.412121 0.018182 0.090909 0.242424 0.600000 0.066667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 regular expression -------------------------------------------------------------------------------- CCAAT[CG][AG][GC] -------------------------------------------------------------------------------- Time 5.04 secs. ******************************************************************************** ******************************************************************************** MOTIF TGATTGGC MEME-2 width = 8 sites = 123 llr = 974 E-value = 4.9e-098 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::a::::1 pos.-specific C 23:1:::6 probability G 16:::aa: matrix T 62:9a::3 bits 2.3 * * 2.1 * * 1.8 ***** 1.6 ***** Relative 1.4 ***** Entropy 1.2 ***** (11.4 bits) 0.9 ***** 0.7 * ***** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGATTGGC consensus CC T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:41978025-41978105 52 1.31e-05 ACCGCCTTGC TGATTGGC TAAAGCCCTG chr21:45175157-45175237 17 1.31e-05 CACTGAGTGA TGATTGGC TGACTCTGAG chr21:43884121-43884201 43 1.31e-05 caaaactcag tgattggc acaggtgtag chr4:6271459-6271539 10 1.31e-05 GATGTGGAG TGATTGGC GGCTACACCG chr1:153895553-153895633 65 1.31e-05 GGAGAAGTGA TGATTGGC GTGCTTAA chr19:12979731-12979811 24 1.31e-05 CTGTCCACCG TGATTGGC TCCAGGCTGG chr8:11660035-11660115 46 1.31e-05 CTTCCGCGAC TGATTGGC CGGGGTCTTC chr16:27095380-27095460 36 1.31e-05 TTCTGAAGTC TGATTGGC CCAGCTTACT chr7:75947420-75947500 62 1.31e-05 CGCTGGCCTG TGATTGGC TCTTGCCATG chr6:82957480-82957560 60 1.31e-05 TGTCTCTTGA TGATTGGC TGGTGCCTGC chr17:76237654-76237734 52 1.31e-05 CCTCACCCTC TGATTGGC TAGTTGACTC chr2:73460434-73460514 4 1.31e-05 GGC TGATTGGC TCTGACGCCT chr21:44772628-44772708 16 1.31e-05 AGAAGGTATC TGATTGGC TGCAGGCATG chr11:64140518-64140598 49 1.31e-05 ggcagtgtgc tgattggc ttaggtctgg chr10:103879478-10387955 56 1.31e-05 GAGTCACTTC TGATTGGC TAACAACCTG chr3:10636757-10636837 30 1.31e-05 GCCTCTGAGT TGATTGGC TCCAGGATGC chr9:101049834-101049914 16 1.31e-05 GGAAGTGctc tgattggc tggtcctgga chr3:119813818-119813898 4 2.19e-05 CGG TGATTGGT GAAGAGAAGG chr10:101190560-10119064 64 2.19e-05 AGACTACGGT TGATTGGT AGAGCGTGC chr10:28592105-28592185 66 2.19e-05 AGCTGGGCTC TGATTGGT GACAGCT chr10:131909408-13190948 10 2.19e-05 TCTGTCTTA TGATTGGT TGTTAGGCCT chr16:3054040-3054120 49 2.19e-05 CACTGGCCCG TGATTGGT TGGGGTGCGG chr12:122028233-12202831 23 2.19e-05 TACTCAATTG TGATTGGT TGACGATCCC chr17:74667928-74668008 57 2.19e-05 GCTATGGCAG TGATTGGT TCACTTCGCG chr19:30370060-30370140 59 2.19e-05 caggccactg tgattggt tcaggggtgg chr16:4316501-4316581 17 2.19e-05 CCAAGGCTTC TGATTGGT GGAATAGGAG chr19:39817094-39817174 29 2.19e-05 CTGGCCTCTC TGATTGGT CCTTCCACAA chr6:159527909-159527989 18 2.19e-05 cttcagcctc tgattggt tgggggccca chr19:1790938-1791018 22 2.19e-05 ctggccatgg tgattggt tcagagaagg chr16:84224645-84224725 51 4.41e-05 CTCAGGGCTC TCATTGGC CATCGTATGG chr14:21905446-21905526 13 4.41e-05 CCCCGCGCCA TCATTGGC TGAAGCGCAC chr10:99205775-99205855 12 4.41e-05 AGTCGATTTC TCATTGGC CAAACCCAGG chr16:4852936-4853016 49 4.41e-05 TCGCGCTCAC TCATTGGC CGGCAGGACA chr1:109940627-109940707 53 4.41e-05 GGCCCACTCC TCATTGGC TCGCGTCGCC chr14:21458019-21458099 5 4.41e-05 TTGC TTATTGGC TGCTGGCAAA chr1:229339360-229339440 57 4.41e-05 ATGTGGAATC TCATTGGC TGAAGGGCTT chr12:49504698-49504778 17 4.41e-05 GGGGAGGAAC TCATTGGC TCCTGGAGAG chr11:107798881-10779896 15 4.41e-05 CTCTCACTTT TCATTGGC TGACCCTCCC chr10:104261953-10426203 49 4.41e-05 AGAGGCGGTA TCATTGGC TAAGATGGAC chr11:67275734-67275814 9 4.41e-05 GAGCCTCC TTATTGGC CGAGACCTGC chr6:80247179-80247259 46 4.41e-05 ACGGCCCTTT TTATTGGC TTCAGTGGAA chr11:118799325-11879940 39 4.41e-05 GTGACTTCAA TCATTGGC TCAGGGCACT chr19:36193368-36193448 51 4.41e-05 CCCTGGCGTC TCATTGGC TATGCTTGAG chr6:43796607-43796687 26 4.41e-05 TGCACTTTTC TCATTGGC CAGGACAACT chr11:22647384-22647464 31 5.31e-05 CTCTGCGTAC TGATTGGA ACATCCGCGA chr19:11849828-11849908 29 5.31e-05 CCCTCATCCC TGATTGGA TAGTGCTCCA chr17:78244795-78244875 70 5.31e-05 ATATCGGCCC TGATTGGA TTA chr15:43213043-43213123 39 5.31e-05 CTACAGGTGC TGATTGGA GAGTGCGTTC chr22:25631984-25632064 49 5.31e-05 GCGCAGGCCC TGATTGGA GGCAAGCGCC chr14:68286404-68286484 45 5.31e-05 TGCCGGCCTC TGATTGGA TACAGTAGCC chr19:2945001-2945081 15 5.31e-05 GTGGAGACTC TGATTGGA CAGTGCTGTC chr14:78083288-78083368 6 5.31e-05 GCACC TGATTGGA GGCCGCATCC chr19:45803984-45804064 29 6.82e-05 gggctgactc tcattggt tgggacttgg chr11:59383424-59383504 41 6.82e-05 TTGGGGAAGC TCATTGGT GCTTTCCTGA chr2:46771263-46771343 57 6.82e-05 GTCTGGTCCC TCATTGGT GAGTGGTCTG chr9:135905908-135905988 60 6.82e-05 CTCTAGTTCT TTATTGGT TAAAACGTAC chr4:175204379-175204459 46 6.82e-05 CTTCGCACTG TCATTGGT CGCAAACTCT chr15:83478231-83478311 13 6.82e-05 TCTCACCTTT TCATTGGT TGTCGCTGGC chr16:84314805-84314885 37 6.82e-05 ccctcccacc tcattggt ccaaatcaga chr16:77224714-77224794 32 8.73e-05 CGGCTCATCT CGATTGGC CCAGAAAGAA chr8:71314379-71314459 7 8.73e-05 TCCGCA CGATTGGC TCACCGACAC chr19:8478097-8478177 22 8.73e-05 ACGTGCAAGG CGATTGGC GAATGCAGGC chr7:856162-856242 72 8.73e-05 gcgcggcccg cgATTGGC T chr20:45985523-45985603 9 8.73e-05 CTCATCCC CGATTGGC TGCCCCGGCA chr11:62495417-62495497 32 1.00e-04 TTTGCCGTTC CGATTGGT CATCCGTGAT chr3:126422979-126423059 29 1.00e-04 CAGCGCCACC CGATTGGT GAAGCCTCTG chr19:13944526-13944606 20 1.35e-04 CTGTGCATGG GGATTGGC TTTTCGCACC chr22:37582436-37582516 23 1.35e-04 GAGAGTTAGT TCATTGGA AGATGGTTGT chr6:160183367-160183447 34 1.35e-04 CCTCGTGCTT GGATTGGC TCCCGGGGTA chr17:79196832-79196912 2 1.35e-04 C GGATTGGC CCTTCACGCT chr17:58755112-58755192 42 1.35e-04 TTTGCTTCTG GGATTGGC TAGAGGGGGT chr1:87794051-87794131 2 1.35e-04 C GGATTGGC AGGTTTTATT chr19:45430458-45430538 65 1.35e-04 CACACCTCTG GGATTGGC TGTCCTCC chr10:42863501-42863581 15 1.35e-04 CCCGTGCCCC TTATTGGA TAAAGCTTCA chr7:53879628-53879708 23 1.35e-04 cgctggcacc ggattggc tggtccccca chr1:25757220-25757300 54 1.35e-04 GCGGGCCCTG GGATTGGC CGACAGCGGT chr13:103451367-10345144 4 1.35e-04 AGG GGATTGGC CCGTGCGTCG chrX:46988584-46988664 15 1.35e-04 GTAGGCATGT TTATTGGA TGATAAGAGG chr3:185826924-185827004 55 1.80e-04 AGCCTTGTTC CCATTGGC CAGAGGCCGT chr20:45323368-45323448 30 1.80e-04 cactctcatc ctattggc cagaacttag chr6:26033877-26033957 30 1.80e-04 AGGAATTCTC CCATTGGC TAATGTCAAA chr11:62521619-62521699 68 1.80e-04 CCCCTGTCAC GGATTGGT CCGCT chr2:198669202-198669282 10 1.80e-04 CCGCAGTGA GGATTGGT CGGGCCGAGC chr15:91835064-91835144 28 1.80e-04 cacttacatc ccattggc caaaactaag chr2:24270331-24270411 45 1.80e-04 ATGGCCCCGT CTATTGGC TTTTGAATAT chr19:45873873-45873953 34 1.80e-04 TATTACGAGA CCATTGGC TAACCTGCCC chr5:162887471-162887551 70 1.80e-04 TTCCTGTGCG GGATTGGT GTG chr1:153940244-153940324 3 1.80e-04 TG CCATTGGC TCGATGTCCT chr1:28573825-28573905 59 1.80e-04 CTGCGGGCTA CTATTGGC TGCCAAGAAA chrX:128977906-128977986 1 1.80e-04 . CTATTGGC CGATCGGCCT chr1:202830783-202830863 31 1.80e-04 CCTCTCTCCG CTATTGGC CAGCCGCTTA chr1:207996110-207996190 32 1.80e-04 TTTTCACCTG CCATTGGC CCACCCACCA chr9:94186147-94186227 18 1.99e-04 CAGCCCCGCG TGACTGGC GGCCGCGGCC chr19:41221003-41221083 68 1.99e-04 AGCAACTCGC TGACTGGC ACGGA chr1:24742156-24742236 64 1.99e-04 TGCCAACTTC TGACTGGC AGGCAGTCT chr9:127905874-127905954 43 2.12e-04 ATCTGTCAGT CGATTGGA CGCTCGGCCC chr9:130007507-130007587 69 2.34e-04 CCTTCCGGCC CTATTGGT GAAT chr14:23938551-23938631 46 2.34e-04 TTCCTTTTTT CTATTGGT CCTTCCAACT chrX:47415605-47415685 4 2.34e-04 TAG CTATTGGT CTGTCAGTGG chr19:1041097-1041177 53 2.34e-04 GGTTGCGCTC CCATTGGT TTACTCCACC chr20:40247079-40247159 44 2.34e-04 AAACACAGAC CCATTGGT CATCCCGGCT chr19:12662379-12662459 1 2.60e-04 . TGATTGGG TGATGATTCA chr19:12405679-12405759 46 2.60e-04 CCCACGACTT TGATTGGG TAGCCCTCCA chr19:2867197-2867277 27 2.60e-04 AGTTGGGATG TGACTGGT GAACTCTCCA chr22:36784135-36784215 44 2.93e-04 ATGGGCAGAC GTATTGGC CTGTGGAAAG chr14:23755428-23755508 40 2.93e-04 CTGAAGTCAG GTATTGGC TGCGTGGGCC chr19:46148909-46148989 62 3.06e-04 GGATGCAGAG GGATTGGA AGGGGCAGGG chr19:51182755-51182835 70 3.73e-04 TTGCATGACG TCACTGGC TGC chr19:41156326-41156406 62 3.73e-04 CATAATGGCC AGATTGGC TGAGCCAAGT chr16:84300166-84300246 54 3.73e-04 tctggggatc ttactggc tggcaggcaa chr19:18315097-18315177 3 3.73e-04 TC TCACTGGC TTAAGCTCTC chr15:81616577-81616657 30 3.73e-04 CGCCTCCCGG AGATTGGC AGGACAAGGA chr19:4153523-4153603 4 3.73e-04 GTG TCACTGGC CCTCAACCCT chr16:16002055-16002135 69 3.96e-04 tctgctgcag ctattgga caag chr1:247171422-247171502 14 4.09e-04 CTAGCGCCGC TGACTGGA TGGGGCTCCA chr7:38217680-38217760 36 4.62e-04 CCCGCGTCGT TTACTGGT CAGTAGAAGA chr1:181003021-181003101 34 4.62e-04 TCCCCTGTTC TTATTGGG AGAAGGCCTT chr1:53168714-53168794 51 4.62e-04 TGGAGGCCTG AGATTGGT GCTCGTGTCT chr22:38054460-38054540 45 5.72e-04 AACTCGGCGG CGACTGGT CCAGCAGAAC chr20:48951805-48951885 60 6.31e-04 ccctcacatt tcactgga tagaatttat chr6:159495514-159495594 56 7.32e-04 agtcacatgg ctactggc ctaactgcaa chr7:44122225-44122305 25 7.32e-04 GGCTCCTACA GGATTGGG TGTCCCGGCC chr1:54204914-54204994 26 7.32e-04 GCCGCTCCAG CCACTGGC TGGCCGCGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:41978025-41978105 1.3e-05 51_[+2]_21 chr21:45175157-45175237 1.3e-05 16_[+2]_56 chr21:43884121-43884201 1.3e-05 42_[+2]_30 chr4:6271459-6271539 1.3e-05 9_[+2]_63 chr1:153895553-153895633 1.3e-05 64_[+2]_8 chr19:12979731-12979811 1.3e-05 23_[+2]_49 chr8:11660035-11660115 1.3e-05 45_[+2]_27 chr16:27095380-27095460 1.3e-05 35_[+2]_37 chr7:75947420-75947500 1.3e-05 61_[+2]_11 chr6:82957480-82957560 1.3e-05 59_[+2]_13 chr17:76237654-76237734 1.3e-05 51_[+2]_21 chr2:73460434-73460514 1.3e-05 3_[+2]_69 chr21:44772628-44772708 1.3e-05 15_[+2]_57 chr11:64140518-64140598 1.3e-05 48_[+2]_24 chr10:103879478-10387955 1.3e-05 55_[+2]_17 chr3:10636757-10636837 1.3e-05 29_[+2]_43 chr9:101049834-101049914 1.3e-05 15_[+2]_57 chr3:119813818-119813898 2.2e-05 3_[+2]_69 chr10:101190560-10119064 2.2e-05 63_[+2]_9 chr10:28592105-28592185 2.2e-05 65_[+2]_7 chr10:131909408-13190948 2.2e-05 9_[+2]_63 chr16:3054040-3054120 2.2e-05 48_[+2]_24 chr12:122028233-12202831 2.2e-05 22_[+2]_50 chr17:74667928-74668008 2.2e-05 56_[+2]_16 chr19:30370060-30370140 2.2e-05 58_[+2]_14 chr16:4316501-4316581 2.2e-05 16_[+2]_56 chr19:39817094-39817174 2.2e-05 28_[+2]_44 chr6:159527909-159527989 2.2e-05 17_[+2]_55 chr19:1790938-1791018 2.2e-05 21_[+2]_51 chr16:84224645-84224725 4.4e-05 50_[+2]_22 chr14:21905446-21905526 4.4e-05 12_[+2]_60 chr10:99205775-99205855 4.4e-05 11_[+2]_61 chr16:4852936-4853016 4.4e-05 48_[+2]_24 chr1:109940627-109940707 4.4e-05 52_[+2]_20 chr14:21458019-21458099 4.4e-05 4_[+2]_68 chr1:229339360-229339440 4.4e-05 56_[+2]_16 chr12:49504698-49504778 4.4e-05 16_[+2]_56 chr11:107798881-10779896 4.4e-05 14_[+2]_58 chr10:104261953-10426203 4.4e-05 48_[+2]_24 chr11:67275734-67275814 4.4e-05 8_[+2]_64 chr6:80247179-80247259 4.4e-05 45_[+2]_27 chr11:118799325-11879940 4.4e-05 38_[+2]_34 chr19:36193368-36193448 4.4e-05 50_[+2]_22 chr6:43796607-43796687 4.4e-05 25_[+2]_47 chr11:22647384-22647464 5.3e-05 30_[+2]_42 chr19:11849828-11849908 5.3e-05 28_[+2]_44 chr17:78244795-78244875 5.3e-05 69_[+2]_3 chr15:43213043-43213123 5.3e-05 38_[+2]_34 chr22:25631984-25632064 5.3e-05 48_[+2]_24 chr14:68286404-68286484 5.3e-05 44_[+2]_28 chr19:2945001-2945081 5.3e-05 14_[+2]_58 chr14:78083288-78083368 5.3e-05 5_[+2]_67 chr19:45803984-45804064 6.8e-05 28_[+2]_44 chr11:59383424-59383504 6.8e-05 40_[+2]_32 chr2:46771263-46771343 6.8e-05 56_[+2]_16 chr9:135905908-135905988 6.8e-05 59_[+2]_13 chr4:175204379-175204459 6.8e-05 45_[+2]_27 chr15:83478231-83478311 6.8e-05 12_[+2]_60 chr16:84314805-84314885 6.8e-05 36_[+2]_36 chr16:77224714-77224794 8.7e-05 31_[+2]_41 chr8:71314379-71314459 8.7e-05 6_[+2]_66 chr19:8478097-8478177 8.7e-05 21_[+2]_51 chr7:856162-856242 8.7e-05 71_[+2]_1 chr20:45985523-45985603 8.7e-05 8_[+2]_64 chr11:62495417-62495497 0.0001 31_[+2]_41 chr3:126422979-126423059 0.0001 28_[+2]_44 chr19:13944526-13944606 0.00013 19_[+2]_53 chr22:37582436-37582516 0.00013 22_[+2]_50 chr6:160183367-160183447 0.00013 33_[+2]_39 chr17:79196832-79196912 0.00013 1_[+2]_71 chr17:58755112-58755192 0.00013 41_[+2]_31 chr1:87794051-87794131 0.00013 1_[+2]_71 chr19:45430458-45430538 0.00013 64_[+2]_8 chr10:42863501-42863581 0.00013 14_[+2]_58 chr7:53879628-53879708 0.00013 22_[+2]_50 chr1:25757220-25757300 0.00013 53_[+2]_19 chr13:103451367-10345144 0.00013 3_[+2]_69 chrX:46988584-46988664 0.00013 14_[+2]_58 chr3:185826924-185827004 0.00018 54_[+2]_18 chr20:45323368-45323448 0.00018 29_[+2]_43 chr6:26033877-26033957 0.00018 29_[+2]_43 chr11:62521619-62521699 0.00018 67_[+2]_5 chr2:198669202-198669282 0.00018 9_[+2]_63 chr15:91835064-91835144 0.00018 27_[+2]_45 chr2:24270331-24270411 0.00018 44_[+2]_28 chr19:45873873-45873953 0.00018 33_[+2]_39 chr5:162887471-162887551 0.00018 69_[+2]_3 chr1:153940244-153940324 0.00018 2_[+2]_70 chr1:28573825-28573905 0.00018 58_[+2]_14 chrX:128977906-128977986 0.00018 [+2]_72 chr1:202830783-202830863 0.00018 30_[+2]_42 chr1:207996110-207996190 0.00018 31_[+2]_41 chr9:94186147-94186227 0.0002 17_[+2]_55 chr19:41221003-41221083 0.0002 67_[+2]_5 chr1:24742156-24742236 0.0002 63_[+2]_9 chr9:127905874-127905954 0.00021 42_[+2]_30 chr9:130007507-130007587 0.00023 68_[+2]_4 chr14:23938551-23938631 0.00023 45_[+2]_27 chrX:47415605-47415685 0.00023 3_[+2]_69 chr19:1041097-1041177 0.00023 52_[+2]_20 chr20:40247079-40247159 0.00023 43_[+2]_29 chr19:12662379-12662459 0.00026 [+2]_72 chr19:12405679-12405759 0.00026 45_[+2]_27 chr19:2867197-2867277 0.00026 26_[+2]_46 chr22:36784135-36784215 0.00029 43_[+2]_29 chr14:23755428-23755508 0.00029 39_[+2]_33 chr19:46148909-46148989 0.00031 61_[+2]_11 chr19:51182755-51182835 0.00037 69_[+2]_3 chr19:41156326-41156406 0.00037 61_[+2]_11 chr16:84300166-84300246 0.00037 53_[+2]_19 chr19:18315097-18315177 0.00037 2_[+2]_70 chr15:81616577-81616657 0.00037 29_[+2]_43 chr19:4153523-4153603 0.00037 3_[+2]_69 chr16:16002055-16002135 0.0004 68_[+2]_4 chr1:247171422-247171502 0.00041 13_[+2]_59 chr7:38217680-38217760 0.00046 35_[+2]_37 chr1:181003021-181003101 0.00046 33_[+2]_39 chr1:53168714-53168794 0.00046 50_[+2]_22 chr22:38054460-38054540 0.00057 44_[+2]_28 chr20:48951805-48951885 0.00063 59_[+2]_13 chr6:159495514-159495594 0.00073 55_[+2]_17 chr7:44122225-44122305 0.00073 24_[+2]_48 chr1:54204914-54204994 0.00073 25_[+2]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGATTGGC width=8 seqs=123 chr17:41978025-41978105 ( 52) TGATTGGC 1 chr21:45175157-45175237 ( 17) TGATTGGC 1 chr21:43884121-43884201 ( 43) TGATTGGC 1 chr4:6271459-6271539 ( 10) TGATTGGC 1 chr1:153895553-153895633 ( 65) TGATTGGC 1 chr19:12979731-12979811 ( 24) TGATTGGC 1 chr8:11660035-11660115 ( 46) TGATTGGC 1 chr16:27095380-27095460 ( 36) TGATTGGC 1 chr7:75947420-75947500 ( 62) TGATTGGC 1 chr6:82957480-82957560 ( 60) TGATTGGC 1 chr17:76237654-76237734 ( 52) TGATTGGC 1 chr2:73460434-73460514 ( 4) TGATTGGC 1 chr21:44772628-44772708 ( 16) TGATTGGC 1 chr11:64140518-64140598 ( 49) TGATTGGC 1 chr10:103879478-10387955 ( 56) TGATTGGC 1 chr3:10636757-10636837 ( 30) TGATTGGC 1 chr9:101049834-101049914 ( 16) TGATTGGC 1 chr3:119813818-119813898 ( 4) TGATTGGT 1 chr10:101190560-10119064 ( 64) TGATTGGT 1 chr10:28592105-28592185 ( 66) TGATTGGT 1 chr10:131909408-13190948 ( 10) TGATTGGT 1 chr16:3054040-3054120 ( 49) TGATTGGT 1 chr12:122028233-12202831 ( 23) TGATTGGT 1 chr17:74667928-74668008 ( 57) TGATTGGT 1 chr19:30370060-30370140 ( 59) TGATTGGT 1 chr16:4316501-4316581 ( 17) TGATTGGT 1 chr19:39817094-39817174 ( 29) TGATTGGT 1 chr6:159527909-159527989 ( 18) TGATTGGT 1 chr19:1790938-1791018 ( 22) TGATTGGT 1 chr16:84224645-84224725 ( 51) TCATTGGC 1 chr14:21905446-21905526 ( 13) TCATTGGC 1 chr10:99205775-99205855 ( 12) TCATTGGC 1 chr16:4852936-4853016 ( 49) TCATTGGC 1 chr1:109940627-109940707 ( 53) TCATTGGC 1 chr14:21458019-21458099 ( 5) TTATTGGC 1 chr1:229339360-229339440 ( 57) TCATTGGC 1 chr12:49504698-49504778 ( 17) TCATTGGC 1 chr11:107798881-10779896 ( 15) TCATTGGC 1 chr10:104261953-10426203 ( 49) TCATTGGC 1 chr11:67275734-67275814 ( 9) TTATTGGC 1 chr6:80247179-80247259 ( 46) TTATTGGC 1 chr11:118799325-11879940 ( 39) TCATTGGC 1 chr19:36193368-36193448 ( 51) TCATTGGC 1 chr6:43796607-43796687 ( 26) TCATTGGC 1 chr11:22647384-22647464 ( 31) TGATTGGA 1 chr19:11849828-11849908 ( 29) TGATTGGA 1 chr17:78244795-78244875 ( 70) TGATTGGA 1 chr15:43213043-43213123 ( 39) TGATTGGA 1 chr22:25631984-25632064 ( 49) TGATTGGA 1 chr14:68286404-68286484 ( 45) TGATTGGA 1 chr19:2945001-2945081 ( 15) TGATTGGA 1 chr14:78083288-78083368 ( 6) TGATTGGA 1 chr19:45803984-45804064 ( 29) TCATTGGT 1 chr11:59383424-59383504 ( 41) TCATTGGT 1 chr2:46771263-46771343 ( 57) TCATTGGT 1 chr9:135905908-135905988 ( 60) TTATTGGT 1 chr4:175204379-175204459 ( 46) TCATTGGT 1 chr15:83478231-83478311 ( 13) TCATTGGT 1 chr16:84314805-84314885 ( 37) TCATTGGT 1 chr16:77224714-77224794 ( 32) CGATTGGC 1 chr8:71314379-71314459 ( 7) CGATTGGC 1 chr19:8478097-8478177 ( 22) CGATTGGC 1 chr7:856162-856242 ( 72) CGATTGGC 1 chr20:45985523-45985603 ( 9) CGATTGGC 1 chr11:62495417-62495497 ( 32) CGATTGGT 1 chr3:126422979-126423059 ( 29) CGATTGGT 1 chr19:13944526-13944606 ( 20) GGATTGGC 1 chr22:37582436-37582516 ( 23) TCATTGGA 1 chr6:160183367-160183447 ( 34) GGATTGGC 1 chr17:79196832-79196912 ( 2) GGATTGGC 1 chr17:58755112-58755192 ( 42) GGATTGGC 1 chr1:87794051-87794131 ( 2) GGATTGGC 1 chr19:45430458-45430538 ( 65) GGATTGGC 1 chr10:42863501-42863581 ( 15) TTATTGGA 1 chr7:53879628-53879708 ( 23) GGATTGGC 1 chr1:25757220-25757300 ( 54) GGATTGGC 1 chr13:103451367-10345144 ( 4) GGATTGGC 1 chrX:46988584-46988664 ( 15) TTATTGGA 1 chr3:185826924-185827004 ( 55) CCATTGGC 1 chr20:45323368-45323448 ( 30) CTATTGGC 1 chr6:26033877-26033957 ( 30) CCATTGGC 1 chr11:62521619-62521699 ( 68) GGATTGGT 1 chr2:198669202-198669282 ( 10) GGATTGGT 1 chr15:91835064-91835144 ( 28) CCATTGGC 1 chr2:24270331-24270411 ( 45) CTATTGGC 1 chr19:45873873-45873953 ( 34) CCATTGGC 1 chr5:162887471-162887551 ( 70) GGATTGGT 1 chr1:153940244-153940324 ( 3) CCATTGGC 1 chr1:28573825-28573905 ( 59) CTATTGGC 1 chrX:128977906-128977986 ( 1) CTATTGGC 1 chr1:202830783-202830863 ( 31) CTATTGGC 1 chr1:207996110-207996190 ( 32) CCATTGGC 1 chr9:94186147-94186227 ( 18) TGACTGGC 1 chr19:41221003-41221083 ( 68) TGACTGGC 1 chr1:24742156-24742236 ( 64) TGACTGGC 1 chr9:127905874-127905954 ( 43) CGATTGGA 1 chr9:130007507-130007587 ( 69) CTATTGGT 1 chr14:23938551-23938631 ( 46) CTATTGGT 1 chrX:47415605-47415685 ( 4) CTATTGGT 1 chr19:1041097-1041177 ( 53) CCATTGGT 1 chr20:40247079-40247159 ( 44) CCATTGGT 1 chr19:12662379-12662459 ( 1) TGATTGGG 1 chr19:12405679-12405759 ( 46) TGATTGGG 1 chr19:2867197-2867277 ( 27) TGACTGGT 1 chr22:36784135-36784215 ( 44) GTATTGGC 1 chr14:23755428-23755508 ( 40) GTATTGGC 1 chr19:46148909-46148989 ( 62) GGATTGGA 1 chr19:51182755-51182835 ( 70) TCACTGGC 1 chr19:41156326-41156406 ( 62) AGATTGGC 1 chr16:84300166-84300246 ( 54) TTACTGGC 1 chr19:18315097-18315177 ( 3) TCACTGGC 1 chr15:81616577-81616657 ( 30) AGATTGGC 1 chr19:4153523-4153603 ( 4) TCACTGGC 1 chr16:16002055-16002135 ( 69) CTATTGGA 1 chr1:247171422-247171502 ( 14) TGACTGGA 1 chr7:38217680-38217760 ( 36) TTACTGGT 1 chr1:181003021-181003101 ( 34) TTATTGGG 1 chr1:53168714-53168794 ( 51) AGATTGGT 1 chr22:38054460-38054540 ( 45) CGACTGGT 1 chr20:48951805-48951885 ( 60) TCACTGGA 1 chr6:159495514-159495594 ( 56) CTACTGGC 1 chr7:44122225-44122305 ( 25) GGATTGGG 1 chr1:54204914-54204994 ( 26) CCACTGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.92768 E= 4.9e-098 -306 -39 -118 161 -1359 -20 95 -25 229 -1359 -1359 -1359 -1359 -139 -1359 213 -1359 -1359 -1359 230 -1359 -1359 176 -1359 -1359 -1359 176 -1359 -65 93 -318 41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 123 E= 4.9e-098 0.024390 0.227642 0.130081 0.617886 0.000000 0.260163 0.569106 0.170732 1.000000 0.000000 0.000000 0.000000 0.000000 0.113821 0.000000 0.886179 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.130081 0.569106 0.032520 0.268293 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATTGGC MEME-2 regular expression -------------------------------------------------------------------------------- [TC][GC]ATTGG[CT] -------------------------------------------------------------------------------- Time 8.56 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCGCCYC MEME-3 width = 8 sites = 51 llr = 388 E-value = 1.3e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1::1:::: pos.-specific C 8a9:aa69 probability G :::8:::: matrix T 1:11::41 bits 2.3 2.1 1.8 * ** 1.6 * ** Relative 1.4 ** ** * Entropy 1.2 ** ** * (11.0 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCCGCCCC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:11849828-11849908 50 6.16e-05 TGCTCCAGGT CCCGCCCC TTGGTGGCTG chr19:54663610-54663690 72 6.16e-05 CATAAGTTGG CCCGCCCC T chr19:11456997-11457077 66 6.16e-05 CCCCTGGGAT CCCGCCCC CTCCACG chr9:94186147-94186227 54 6.16e-05 cgcgcccgca cccgcccc cggcccgccg chr15:75744087-75744167 73 6.16e-05 TTATGATTTT CCCGCCCC chr2:73298544-73298624 11 6.16e-05 GGAGTCCGCG CCCGCCCC GTTGACCAAT chr9:96928427-96928507 69 6.16e-05 TTCCGCGGCG CCCGCCCC TGCA chr1:17445986-17446066 64 6.16e-05 CAAGCGTGGT CCCGCCCC TAACTCGTC chrX:153059563-153059643 26 6.16e-05 AAGCCCTTTC CCCGCCCC TGGTGGGGCC chr19:41221003-41221083 23 6.16e-05 CCTCTGTATG CCCGCCCC CTTCGGCCAG chr11:75526152-75526232 37 6.16e-05 GCCGTTGGGT CCCGCCCC CTTGAGGGCT chr1:202830783-202830863 15 6.16e-05 CCCACCGAGG CCCGCCCC TCTCTCCGCT chr3:42543982-42544062 18 6.16e-05 GCTCCCCAGC CCCGCCCC ATACCTGCGC chr12:27676964-27677044 53 6.16e-05 cgcccccggc cccgcccc ACTGCTGACT chr12:6960494-6960574 32 1.04e-04 CCACGTAAGA CCCGCCTC GAGCCAAAGG chr1:161195567-161195647 46 1.04e-04 TCAAGTCCTG CCCGCCTC TGCAGCTCCA chr16:66914333-66914413 39 1.04e-04 CCATCAAGGG CCCGCCTC CGCAATTGAG chr7:44122225-44122305 54 1.04e-04 CTCCGGAAGA CCCGCCTC CATGCAAATA chr9:35072670-35072750 30 1.04e-04 CGGACTCTCG CCCGCCTC TCCGCGCCTC chr19:12405679-12405759 67 1.04e-04 CCCTCCAGGT CCCGCCTC CTGGGC chr18:55102460-55102540 39 1.04e-04 CCGTGGAAGG CCCGCCTC CCGGGGCAGC chr15:86338169-86338249 1 1.04e-04 . CCCGCCTC CCGGCCCGAA chr15:81616577-81616657 18 1.04e-04 TCAGACGGAT CCCGCCTC CCGGAGATTG chr19:4471675-4471755 35 1.04e-04 CCGCTGAAGC CCCGCCTC TTGTGATGGC chr11:62521619-62521699 11 1.88e-04 CAGGGCGAGC TCCGCCCC TTCCCACCTT chr1:109940627-109940707 7 1.88e-04 GGCCTC TCCGCCCC ATAGGCTGGC chr1:247171422-247171502 35 1.88e-04 GGCTCCAGGC CCCACCCC CTCAGGTCTT chr12:113622770-11362285 24 1.88e-04 GGAGCCAGGA TCCGCCCC ACGAGCAGGA chrX:128977906-128977986 26 1.88e-04 CCTCGGCGCC TCCGCCCC GGCCGCCCCT chr6:36165070-36165150 57 1.88e-04 TTCTCGCCTC TCCGCCCC GCTCATTCGC chr19:1790938-1791018 4 1.88e-04 tgc cccacccc ctggccatgg chr6:43796607-43796687 8 1.88e-04 ATTAAGT CCCACCCC TGCACTTTTC chr15:43213043-43213123 17 2.46e-04 AGCGCGCACG CCCACCTC TCCGCTACAG chr19:13944526-13944606 72 2.46e-04 CGGAGACGGC CCCACCTC C chr2:73460434-73460514 40 2.46e-04 AGCCACACTT TCCGCCTC TGCGCCTTAG chr19:17400502-17400582 68 2.46e-04 CGAGTTTCCA CCCACCTC GCCAC chr19:12662379-12662459 22 2.88e-04 TGATTCAAGT CCTGCCCC CTTGGTACTG chr1:153940244-153940324 18 2.88e-04 GGCTCGATGT CCTGCCCC TCCGAAACCT chr11:67275734-67275814 22 2.88e-04 TTGGCCGAGA CCTGCCCC AGCAGGTCGC chr7:100184164-100184244 45 3.16e-04 GGAATCTGGA CCTGCCTC TTCTCTGAGG chr6:160183367-160183447 66 3.16e-04 CATCGCGTGG CCTGCCTC TCCCATT chr3:195163918-195163998 44 4.01e-04 CCTTGCCACA ACCGCCCC CGAGGGCCAA chr7:23053786-23053866 6 4.01e-04 CCACC ACCGCCCC ACGCCAGTTC chr8:107738252-107738332 1 4.01e-04 . CCCTCCCC AGCTTTACAG chr7:100825861-100825941 47 4.01e-04 ACGTTTCGGC CCCTCCCC TTAAGTCCAA chr10:102790910-10279099 37 4.01e-04 GCTGGCCTGC ACCGCCCC GGGCTCCCAT chr19:55678045-55678125 19 4.43e-04 GTGAGCGAGG CCCGCCCT CTACAAACTT chr7:856162-856242 45 4.43e-04 CTGCGTTGCT cccgccct cggcccgggg chr19:18315097-18315177 59 5.00e-04 ATTGTCTACG CCCTCCTC TTGTCCAATG chrX:47415605-47415685 67 5.29e-04 TATCCCAAGG CCCGCCTT CTACTG chr19:1041097-1041177 65 5.58e-04 ATTGGTTTAC TCCACCCC TGGGGTAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:11849828-11849908 6.2e-05 49_[+3]_23 chr19:54663610-54663690 6.2e-05 71_[+3]_1 chr19:11456997-11457077 6.2e-05 65_[+3]_7 chr9:94186147-94186227 6.2e-05 53_[+3]_19 chr15:75744087-75744167 6.2e-05 72_[+3] chr2:73298544-73298624 6.2e-05 10_[+3]_62 chr9:96928427-96928507 6.2e-05 68_[+3]_4 chr1:17445986-17446066 6.2e-05 63_[+3]_9 chrX:153059563-153059643 6.2e-05 25_[+3]_47 chr19:41221003-41221083 6.2e-05 22_[+3]_50 chr11:75526152-75526232 6.2e-05 36_[+3]_36 chr1:202830783-202830863 6.2e-05 14_[+3]_58 chr3:42543982-42544062 6.2e-05 17_[+3]_55 chr12:27676964-27677044 6.2e-05 52_[+3]_20 chr12:6960494-6960574 0.0001 31_[+3]_41 chr1:161195567-161195647 0.0001 45_[+3]_27 chr16:66914333-66914413 0.0001 38_[+3]_34 chr7:44122225-44122305 0.0001 53_[+3]_19 chr9:35072670-35072750 0.0001 29_[+3]_43 chr19:12405679-12405759 0.0001 66_[+3]_6 chr18:55102460-55102540 0.0001 38_[+3]_34 chr15:86338169-86338249 0.0001 [+3]_72 chr15:81616577-81616657 0.0001 17_[+3]_55 chr19:4471675-4471755 0.0001 34_[+3]_38 chr11:62521619-62521699 0.00019 10_[+3]_62 chr1:109940627-109940707 0.00019 6_[+3]_66 chr1:247171422-247171502 0.00019 34_[+3]_38 chr12:113622770-11362285 0.00019 23_[+3]_49 chrX:128977906-128977986 0.00019 25_[+3]_47 chr6:36165070-36165150 0.00019 56_[+3]_16 chr19:1790938-1791018 0.00019 3_[+3]_69 chr6:43796607-43796687 0.00019 7_[+3]_65 chr15:43213043-43213123 0.00025 16_[+3]_56 chr19:13944526-13944606 0.00025 71_[+3]_1 chr2:73460434-73460514 0.00025 39_[+3]_33 chr19:17400502-17400582 0.00025 67_[+3]_5 chr19:12662379-12662459 0.00029 21_[+3]_51 chr1:153940244-153940324 0.00029 17_[+3]_55 chr11:67275734-67275814 0.00029 21_[+3]_51 chr7:100184164-100184244 0.00032 44_[+3]_28 chr6:160183367-160183447 0.00032 65_[+3]_7 chr3:195163918-195163998 0.0004 43_[+3]_29 chr7:23053786-23053866 0.0004 5_[+3]_67 chr8:107738252-107738332 0.0004 [+3]_72 chr7:100825861-100825941 0.0004 46_[+3]_26 chr10:102790910-10279099 0.0004 36_[+3]_36 chr19:55678045-55678125 0.00044 18_[+3]_54 chr7:856162-856242 0.00044 44_[+3]_28 chr19:18315097-18315177 0.0005 58_[+3]_14 chrX:47415605-47415685 0.00053 66_[+3]_6 chr19:1041097-1041177 0.00056 64_[+3]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCGCCYC width=8 seqs=51 chr19:11849828-11849908 ( 50) CCCGCCCC 1 chr19:54663610-54663690 ( 72) CCCGCCCC 1 chr19:11456997-11457077 ( 66) CCCGCCCC 1 chr9:94186147-94186227 ( 54) CCCGCCCC 1 chr15:75744087-75744167 ( 73) CCCGCCCC 1 chr2:73298544-73298624 ( 11) CCCGCCCC 1 chr9:96928427-96928507 ( 69) CCCGCCCC 1 chr1:17445986-17446066 ( 64) CCCGCCCC 1 chrX:153059563-153059643 ( 26) CCCGCCCC 1 chr19:41221003-41221083 ( 23) CCCGCCCC 1 chr11:75526152-75526232 ( 37) CCCGCCCC 1 chr1:202830783-202830863 ( 15) CCCGCCCC 1 chr3:42543982-42544062 ( 18) CCCGCCCC 1 chr12:27676964-27677044 ( 53) CCCGCCCC 1 chr12:6960494-6960574 ( 32) CCCGCCTC 1 chr1:161195567-161195647 ( 46) CCCGCCTC 1 chr16:66914333-66914413 ( 39) CCCGCCTC 1 chr7:44122225-44122305 ( 54) CCCGCCTC 1 chr9:35072670-35072750 ( 30) CCCGCCTC 1 chr19:12405679-12405759 ( 67) CCCGCCTC 1 chr18:55102460-55102540 ( 39) CCCGCCTC 1 chr15:86338169-86338249 ( 1) CCCGCCTC 1 chr15:81616577-81616657 ( 18) CCCGCCTC 1 chr19:4471675-4471755 ( 35) CCCGCCTC 1 chr11:62521619-62521699 ( 11) TCCGCCCC 1 chr1:109940627-109940707 ( 7) TCCGCCCC 1 chr1:247171422-247171502 ( 35) CCCACCCC 1 chr12:113622770-11362285 ( 24) TCCGCCCC 1 chrX:128977906-128977986 ( 26) TCCGCCCC 1 chr6:36165070-36165150 ( 57) TCCGCCCC 1 chr19:1790938-1791018 ( 4) CCCACCCC 1 chr6:43796607-43796687 ( 8) CCCACCCC 1 chr15:43213043-43213123 ( 17) CCCACCTC 1 chr19:13944526-13944606 ( 72) CCCACCTC 1 chr2:73460434-73460514 ( 40) TCCGCCTC 1 chr19:17400502-17400582 ( 68) CCCACCTC 1 chr19:12662379-12662459 ( 22) CCTGCCCC 1 chr1:153940244-153940324 ( 18) CCTGCCCC 1 chr11:67275734-67275814 ( 22) CCTGCCCC 1 chr7:100184164-100184244 ( 45) CCTGCCTC 1 chr6:160183367-160183447 ( 66) CCTGCCTC 1 chr3:195163918-195163998 ( 44) ACCGCCCC 1 chr7:23053786-23053866 ( 6) ACCGCCCC 1 chr8:107738252-107738332 ( 1) CCCTCCCC 1 chr7:100825861-100825941 ( 47) CCCTCCCC 1 chr10:102790910-10279099 ( 37) ACCGCCCC 1 chr19:55678045-55678125 ( 19) CCCGCCCT 1 chr7:856162-856242 ( 45) CCCGCCCT 1 chr19:18315097-18315177 ( 59) CCCTCCTC 1 chrX:47415605-47415685 ( 67) CCCGCCTT 1 chr19:1041097-1041177 ( 65) TCCACCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.99089 E= 1.3e-001 -179 143 -1232 -56 -1232 175 -1232 -1232 -1232 160 -1232 -105 -57 -1232 144 -178 -1232 175 -1232 -1232 -1232 175 -1232 -1232 -1232 112 -1232 80 -1232 166 -1232 -178 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 51 E= 1.3e-001 0.058824 0.803922 0.000000 0.137255 0.000000 1.000000 0.000000 0.000000 0.000000 0.901961 0.000000 0.098039 0.137255 0.000000 0.803922 0.058824 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.647059 0.000000 0.352941 0.000000 0.941176 0.000000 0.058824 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCYC MEME-3 regular expression -------------------------------------------------------------------------------- CCCGCC[CT]C -------------------------------------------------------------------------------- Time 11.93 secs. ******************************************************************************** ******************************************************************************** MOTIF GAKTGACA MEME-4 width = 8 sites = 18 llr = 167 E-value = 9.4e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :a:::9:8 pos.-specific C ::::::a: probability G a:62a1:2 matrix T ::48:::: bits 2.3 * 2.1 * 1.8 ** *** 1.6 ** ***** Relative 1.4 ** ***** Entropy 1.2 ** ***** (13.4 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GAGTGACA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:11849828-11849908 67 9.07e-06 CTTGGTGGCT GATTGACA GAAGAA chr7:38217680-38217760 52 9.07e-06 GTCAGTAGAA GATTGACA TGTCATCTGG chr2:242088903-242088983 24 9.07e-06 GACTAGCACC GATTGACA AGCTCCACGG chr19:12405679-12405759 13 9.07e-06 CCTCGCGCCT GATTGACA ATTCTCAGGA chr19:13906043-13906123 6 9.07e-06 CCCGT GATTGACA GCGCCCCTCG chr1:150601675-150601755 26 2.23e-05 GTACAGTACT GAGTGACA AACGACCCAA chr19:12662379-12662459 39 2.23e-05 CCTTGGTACT GAGTGACA GGAGAAGCAA chr1:247171422-247171502 53 2.23e-05 CTCAGGTCTT GAGTGACA GGAGGTGCGA chr10:42863501-42863581 52 2.23e-05 CCCAGTCCGT GAGTGACA GAAGATGTGA chr6:112194700-112194780 5 2.23e-05 TCGA GAGTGACA GGCCCGGCTG chr1:167691113-167691193 12 4.86e-05 GCGGACGGAT GATGGACA GCCTGACTCT chr10:104261953-10426203 60 4.86e-05 CATTGGCTAA GATGGACA GCCAGAGCAA chr9:104295764-104295844 9 4.86e-05 TCCCCGGA GATTGACG GGACCGTCAG chr19:41156326-41156406 33 8.68e-05 actgtgatcg gagggaca gaaGGAAAAA chr19:33166110-33166190 50 8.68e-05 TCGTTTCCCA GAGTGACG TGTACGCAGA chr12:27676964-27677044 5 8.68e-05 CTCT GAGTGACG TTCCCCGGCT chrX:153656874-153656954 18 1.19e-04 GAGTGGCCGC GAGTGGCA TGCACTTGGT chr14:90920811-90920891 17 1.19e-04 GCAGGGTCTG GAGTGGCA GGACCGGCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:11849828-11849908 9.1e-06 66_[+4]_6 chr7:38217680-38217760 9.1e-06 51_[+4]_21 chr2:242088903-242088983 9.1e-06 23_[+4]_49 chr19:12405679-12405759 9.1e-06 12_[+4]_60 chr19:13906043-13906123 9.1e-06 5_[+4]_67 chr1:150601675-150601755 2.2e-05 25_[+4]_47 chr19:12662379-12662459 2.2e-05 38_[+4]_34 chr1:247171422-247171502 2.2e-05 52_[+4]_20 chr10:42863501-42863581 2.2e-05 51_[+4]_21 chr6:112194700-112194780 2.2e-05 4_[+4]_68 chr1:167691113-167691193 4.9e-05 11_[+4]_61 chr10:104261953-10426203 4.9e-05 59_[+4]_13 chr9:104295764-104295844 4.9e-05 8_[+4]_64 chr19:41156326-41156406 8.7e-05 32_[+4]_40 chr19:33166110-33166190 8.7e-05 49_[+4]_23 chr12:27676964-27677044 8.7e-05 4_[+4]_68 chrX:153656874-153656954 0.00012 17_[+4]_55 chr14:90920811-90920891 0.00012 16_[+4]_56 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAKTGACA width=8 seqs=18 chr19:11849828-11849908 ( 67) GATTGACA 1 chr7:38217680-38217760 ( 52) GATTGACA 1 chr2:242088903-242088983 ( 24) GATTGACA 1 chr19:12405679-12405759 ( 13) GATTGACA 1 chr19:13906043-13906123 ( 6) GATTGACA 1 chr1:150601675-150601755 ( 26) GAGTGACA 1 chr19:12662379-12662459 ( 39) GAGTGACA 1 chr1:247171422-247171502 ( 53) GAGTGACA 1 chr10:42863501-42863581 ( 52) GAGTGACA 1 chr6:112194700-112194780 ( 5) GAGTGACA 1 chr1:167691113-167691193 ( 12) GATGGACA 1 chr10:104261953-10426203 ( 60) GATGGACA 1 chr9:104295764-104295844 ( 9) GATTGACG 1 chr19:41156326-41156406 ( 33) GAGGGACA 1 chr19:33166110-33166190 ( 50) GAGTGACG 1 chr12:27676964-27677044 ( 5) GAGTGACG 1 chrX:153656874-153656954 ( 18) GAGTGGCA 1 chr14:90920811-90920891 ( 17) GAGTGGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1187 E= 9.4e+001 -1081 -1081 176 -1081 229 -1081 -1081 -1081 -1081 -1081 91 113 -1081 -1081 -82 204 -1081 -1081 176 -1081 212 -1081 -141 -1081 -1081 175 -1081 -1081 203 -1081 -82 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 18 E= 9.4e+001 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.555556 0.444444 0.000000 0.000000 0.166667 0.833333 0.000000 0.000000 1.000000 0.000000 0.888889 0.000000 0.111111 0.000000 0.000000 1.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAKTGACA MEME-4 regular expression -------------------------------------------------------------------------------- GA[GT]TGACA -------------------------------------------------------------------------------- Time 15.20 secs. ******************************************************************************** ******************************************************************************** MOTIF CWGCCAVT MEME-5 width = 8 sites = 18 llr = 167 E-value = 1.7e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :7:::a4: pos.-specific C a::aa:2: probability G ::a:::4: matrix T :3:::::a bits 2.3 * * 2.1 * * 1.8 * **** * 1.6 * **** * Relative 1.4 ****** * Entropy 1.2 ****** * (13.4 bits) 0.9 ****** * 0.7 ****** * 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CAGCCAAT consensus T G sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:3732968-3733048 4 1.35e-05 AGG CAGCCAAT CCAGTTGCTC chr19:36248881-36248961 43 1.35e-05 GCAGTCGTCC CAGCCAAT CCTGAAACAC chr9:35072670-35072750 69 1.35e-05 CCGCAGATCA CAGCCAAT CAGG chr12:49259696-49259776 61 1.35e-05 TTCCCTCCAG CAGCCAAT GGATCTGAGG chr12:8179294-8179374 73 1.35e-05 ACCCGAACCC CAGCCAAT chr19:19779524-19779604 22 3.29e-05 CCTGGGGCAC CAGCCAGT CAGAGGCGCT chr22:35696167-35696247 20 3.29e-05 ATGTATATGA CAGCCAGT AGGTAAGGAG chr4:89205795-89205875 41 3.29e-05 CCCTCGATCG CAGCCAGT CACAGATGCC chr22:40440687-40440767 24 3.29e-05 GCACAAAAGC CAGCCAGT GAGAGCCGGA chr13:73633001-73633081 72 4.63e-05 CGCGGCGGCG CTGCCAAT C chr6:43142456-43142536 48 4.63e-05 AGCAACGCCT CTGCCAAT CAAGGGTCTT chr19:19174404-19174484 7 8.53e-05 CGGGGC CTGCCAGT CTTCGGCTTT chr2:242088903-242088983 44 8.53e-05 CTCCACGGAC CAGCCACT TGCGCGTATG chr18:55102460-55102540 12 8.53e-05 GCCCCCTCCA CAGCCACT GGTAGCTTCC chr1:24742156-24742236 29 8.53e-05 CCCGTCCTCG CAGCCACT TGCCTGCGCG chr5:96144083-96144163 64 8.53e-05 CATCTCGCCA CTGCCAGT GGGCTGAGA chr2:43864301-43864381 68 8.53e-05 GCTACACCGG CTGCCAGT CCCTG chr15:91835064-91835144 8 1.05e-04 ggaactg ctgccact tgcacttaca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:3732968-3733048 1.3e-05 3_[+5]_69 chr19:36248881-36248961 1.3e-05 42_[+5]_30 chr9:35072670-35072750 1.3e-05 68_[+5]_4 chr12:49259696-49259776 1.3e-05 60_[+5]_12 chr12:8179294-8179374 1.3e-05 72_[+5] chr19:19779524-19779604 3.3e-05 21_[+5]_51 chr22:35696167-35696247 3.3e-05 19_[+5]_53 chr4:89205795-89205875 3.3e-05 40_[+5]_32 chr22:40440687-40440767 3.3e-05 23_[+5]_49 chr13:73633001-73633081 4.6e-05 71_[+5]_1 chr6:43142456-43142536 4.6e-05 47_[+5]_25 chr19:19174404-19174484 8.5e-05 6_[+5]_66 chr2:242088903-242088983 8.5e-05 43_[+5]_29 chr18:55102460-55102540 8.5e-05 11_[+5]_61 chr1:24742156-24742236 8.5e-05 28_[+5]_44 chr5:96144083-96144163 8.5e-05 63_[+5]_9 chr2:43864301-43864381 8.5e-05 67_[+5]_5 chr15:91835064-91835144 0.0001 7_[+5]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CWGCCAVT width=8 seqs=18 chrX:3732968-3733048 ( 4) CAGCCAAT 1 chr19:36248881-36248961 ( 43) CAGCCAAT 1 chr9:35072670-35072750 ( 69) CAGCCAAT 1 chr12:49259696-49259776 ( 61) CAGCCAAT 1 chr12:8179294-8179374 ( 73) CAGCCAAT 1 chr19:19779524-19779604 ( 22) CAGCCAGT 1 chr22:35696167-35696247 ( 20) CAGCCAGT 1 chr4:89205795-89205875 ( 41) CAGCCAGT 1 chr22:40440687-40440767 ( 24) CAGCCAGT 1 chr13:73633001-73633081 ( 72) CTGCCAAT 1 chr6:43142456-43142536 ( 48) CTGCCAAT 1 chr19:19174404-19174484 ( 7) CTGCCAGT 1 chr2:242088903-242088983 ( 44) CAGCCACT 1 chr18:55102460-55102540 ( 12) CAGCCACT 1 chr1:24742156-24742236 ( 29) CAGCCACT 1 chr5:96144083-96144163 ( 64) CTGCCAGT 1 chr2:43864301-43864381 ( 68) CTGCCAGT 1 chr15:91835064-91835144 ( 8) CTGCCACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.2854 E= 1.7e+002 -1081 175 -1081 -1081 171 -1081 -1081 72 -1081 -1081 176 -1081 -1081 175 -1081 -1081 -1081 175 -1081 -1081 229 -1081 -1081 -1081 93 -42 40 -1081 -1081 -1081 -1081 230 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 18 E= 1.7e+002 0.000000 1.000000 0.000000 0.000000 0.666667 0.000000 0.000000 0.333333 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.388889 0.222222 0.388889 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGCCAVT MEME-5 regular expression -------------------------------------------------------------------------------- C[AT]GCCA[AGC]T -------------------------------------------------------------------------------- Time 18.41 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:46148909-46148989 1.56e-03 13_[+1(2.68e-05)]_59 chr19:3344313-3344393 1.70e-02 39_[+1(2.68e-05)]_33 chr1:207996110-207996190 3.89e-05 46_[+1(1.35e-05)]_26 chr10:102790910-10279099 8.64e-04 80 chr20:40247079-40247159 3.36e-02 80 chr20:48951805-48951885 1.35e-01 80 chr17:47270312-47270392 1.25e-02 80 chr6:43796607-43796687 2.12e-03 25_[+2(4.41e-05)]_47 chr13:20532721-20532801 1.51e-03 38_[+1(6.55e-05)]_34 chr22:40440218-40440298 3.76e-03 80 chr9:101049834-101049914 5.25e-04 15_[+2(1.31e-05)]_29_[+1(7.91e-05)]_\ 20 chr3:10636757-10636837 4.33e-02 29_[+2(1.31e-05)]_43 chr3:100211352-100211432 9.51e-03 15_[+1(4.62e-05)]_23_[+1(2.68e-05)]_\ 26 chr21:34494586-34494666 8.11e-05 23_[+1(2.68e-05)]_49 chr14:78083288-78083368 9.56e-02 5_[+2(5.31e-05)]_67 chr3:149530910-149530990 4.57e-02 58_[+1(2.68e-05)]_14 chr16:84314805-84314885 9.64e-04 36_[+2(6.82e-05)]_36 chr14:90920811-90920891 1.03e-04 31_[+5(1.35e-05)]_41 chr19:17400502-17400582 9.27e-02 80 chr14:23755428-23755508 7.82e-02 80 chr19:1790938-1791018 5.60e-05 21_[+2(2.19e-05)]_28_[+1(2.68e-05)]_\ 15 chr1:46049138-46049218 1.81e-01 80 chr21:40684400-40684480 5.91e-02 80 chr2:43864301-43864381 1.52e-03 67_[+5(8.53e-05)]_5 chr7:100825861-100825941 4.83e-03 80 chr19:4153523-4153603 7.24e-04 39_[+1(1.35e-05)]_33 chr19:54640788-54640868 2.18e-01 80 chrX:46988584-46988664 1.85e-02 80 chr6:36165070-36165150 1.29e-05 35_[+5(1.35e-05)]_37 chr12:27676964-27677044 2.36e-05 4_[+4(8.68e-05)]_10_[+1(1.35e-05)]_\ 22_[+3(6.16e-05)]_20 chr13:103451367-10345144 7.52e-02 80 chr3:42543982-42544062 8.17e-04 17_[+3(6.16e-05)]_55 chr19:4471675-4471755 1.92e-04 80 chr1:25757220-25757300 8.03e-02 80 chr19:36193368-36193448 6.31e-02 50_[+2(4.41e-05)]_22 chr16:31711818-31711898 9.84e-02 42_[+1(1.35e-05)]_30 chr1:202830783-202830863 2.34e-03 14_[+3(6.16e-05)]_58 chr9:104295764-104295844 2.81e-05 8_[+4(4.86e-05)]_7_[+5(1.35e-05)]_\ 27_[+1(9.25e-05)]_14 chr10:103879478-10387955 2.57e-02 55_[+2(1.31e-05)]_17 chr6:112194700-112194780 3.24e-04 4_[+4(2.23e-05)]_68 chr15:83478231-83478311 2.49e-02 12_[+2(6.82e-05)]_60 chr14:94492614-94492694 9.29e-02 80 chr11:118799325-11879940 4.51e-02 38_[+2(4.41e-05)]_34 chr20:34360205-34360285 2.65e-04 45_[+1(1.35e-05)]_27 chr14:75530768-75530848 3.06e-02 31_[+1(1.35e-05)]_41 chr22:40440687-40440767 4.65e-04 23_[+5(3.29e-05)]_49 chr11:64140518-64140598 2.39e-04 18_[+1(7.91e-05)]_22_[+2(1.31e-05)]_\ 24 chr18:59854301-59854381 1.53e-01 80 chr17:55740509-55740589 3.42e-03 80 chr6:80247179-80247259 5.24e-03 45_[+2(4.41e-05)]_27 chr7:73868129-73868209 2.80e-02 80 chr21:44772628-44772708 2.90e-02 15_[+2(1.31e-05)]_41_[+2(2.19e-05)]_\ 8 chr5:96144083-96144163 7.57e-03 63_[+5(8.53e-05)]_9 chr11:67275734-67275814 2.89e-03 8_[+2(4.41e-05)]_32_[+2(8.73e-05)]_\ 24 chr6:159527909-159527989 2.17e-03 17_[+2(2.19e-05)]_55 chrX:128977906-128977986 6.57e-04 80 chr16:22385995-22386075 3.76e-02 80 chr7:53879628-53879708 5.36e-03 80 chr2:73460434-73460514 1.11e-03 3_[+2(1.31e-05)]_69 chr10:104261953-10426203 1.10e-03 48_[+2(4.41e-05)]_3_[+4(4.86e-05)]_\ 13 chr7:8008273-8008353 1.54e-02 35_[+1(7.91e-05)]_37 chr19:39817094-39817174 8.10e-02 28_[+2(2.19e-05)]_44 chr8:145159258-145159338 6.82e-02 80 chr17:76237654-76237734 2.76e-03 51_[+2(1.31e-05)]_21 chr16:4316501-4316581 2.61e-02 16_[+2(2.19e-05)]_24_[+2(2.19e-05)]_\ 24 chr19:1041097-1041177 6.13e-06 17_[+1(1.35e-05)]_55 chrX:47415605-47415685 1.42e-02 80 chr19:13906043-13906123 7.40e-03 5_[+4(9.07e-06)]_67 chr11:75526152-75526232 2.96e-04 36_[+3(6.16e-05)]_13_[+1(2.68e-05)]_\ 15 chr22:38054460-38054540 1.09e-01 80 chr12:113622770-11362285 2.12e-05 43_[+5(1.35e-05)]_29 chr1:53168714-53168794 2.33e-02 13_[+1(7.91e-05)]_59 chr19:30370060-30370140 6.87e-05 22_[+1(2.68e-05)]_28_[+2(2.19e-05)]_\ 14 chr20:45985523-45985603 2.39e-03 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2.29e-01 80 chr1:28573825-28573905 6.32e-02 80 chr7:856162-856242 1.58e-02 71_[+2(8.73e-05)]_1 chr1:167691113-167691193 9.96e-04 11_[+4(4.86e-05)]_41_[+1(2.68e-05)]_\ 12 chr13:20437855-20437935 2.12e-02 80 chr1:229339360-229339440 3.32e-03 56_[+2(4.41e-05)]_16 chr11:124981504-12498158 4.47e-01 80 chr19:45430458-45430538 3.51e-02 80 chr4:175204379-175204459 2.64e-02 45_[+2(6.82e-05)]_27 chr17:74667928-74668008 1.00e-02 56_[+2(2.19e-05)]_16 chr14:21458019-21458099 1.54e-01 4_[+2(4.41e-05)]_68 chr19:8478097-8478177 1.73e-02 21_[+2(8.73e-05)]_51 chr16:27095380-27095460 2.31e-04 35_[+2(1.31e-05)]_29_[+1(1.35e-05)] chr8:11660035-11660115 1.81e-04 [+1(2.68e-05)]_37_[+2(1.31e-05)]_27 chr6:32145962-32146042 3.38e-02 80 chr2:62081710-62081790 1.41e-02 25_[+1(1.35e-05)]_47 chr1:109940627-109940707 5.46e-03 52_[+2(4.41e-05)]_20 chr1:153940244-153940324 4.41e-05 48_[+1(1.35e-05)]_24 chr8:71314379-71314459 1.35e-02 6_[+2(8.73e-05)]_33_[+2(8.73e-05)]_\ 25 chr19:54641298-54641378 8.69e-02 80 chr4:89205795-89205875 1.04e-02 40_[+5(3.29e-05)]_32 chr1:87794051-87794131 2.22e-03 2_[+4(9.99e-05)]_70 chr8:107738252-107738332 2.11e-02 80 chr15:90895373-90895453 1.51e-01 80 chr3:152879110-152879190 4.29e-02 40_[+1(2.68e-05)]_32 chr7:23053786-23053866 3.75e-03 67_[+1(2.68e-05)]_5 chr19:2867197-2867277 3.13e-04 5_[+1(1.35e-05)]_28_[+1(1.35e-05)]_\ 23_[+1(7.91e-05)] chr19:33166110-33166190 3.36e-03 25_[+1(2.68e-05)]_16_[+4(8.68e-05)]_\ 23 chr5:149790255-149790335 4.28e-01 80 chr1:150669784-150669864 1.73e-01 80 chr22:35696167-35696247 1.30e-02 19_[+5(3.29e-05)]_37_[+5(1.35e-05)]_\ 8 chr16:77224714-77224794 8.87e-02 31_[+2(8.73e-05)]_41 chr8:25316012-25316092 3.81e-04 46_[+1(1.35e-05)]_26 chr14:68286404-68286484 5.10e-03 44_[+2(5.31e-05)]_28 chr5:32313297-32313377 5.84e-02 80 chr1:54204914-54204994 1.20e-03 22_[+5(8.53e-05)]_50 chr17:58755112-58755192 1.08e-01 80 chr16:84300166-84300246 9.70e-03 7_[+1(6.55e-05)]_65 chr2:74685280-74685360 1.95e-03 16_[+1(1.35e-05)]_56 chr9:94676968-94677048 1.25e-03 30_[+1(7.91e-05)]_42 chr16:4852936-4853016 2.68e-02 48_[+2(4.41e-05)]_24 chr13:26795994-26796074 9.58e-03 8_[+1(7.91e-05)]_32_[+1(4.62e-05)]_\ 24 chr9:127905874-127905954 1.21e-02 80 chrX:153059563-153059643 5.71e-04 25_[+3(6.16e-05)]_15_[+1(4.62e-05)]_\ 24 chr12:8179294-8179374 2.36e-03 29_[+5(1.35e-05)]_35_[+5(1.35e-05)] chr1:17445986-17446066 8.18e-02 12_[+3(6.16e-05)]_43_[+3(6.16e-05)]_\ 9 chr19:41156326-41156406 1.05e-04 16_[+1(7.91e-05)]_8_[+4(8.68e-05)]_\ 40 chr4:48782457-48782537 9.04e-02 80 chr11:62495417-62495497 1.52e-02 80 chr14:23938551-23938631 1.53e-02 80 chr5:137690762-137690842 8.75e-02 80 chr6:43142456-43142536 2.47e-04 7_[+1(6.55e-05)]_32_[+5(4.63e-05)]_\ 25 chr9:96928427-96928507 1.88e-03 40_[+1(6.55e-05)]_20_[+3(6.16e-05)]_\ 4 chr22:25631984-25632064 5.27e-02 48_[+2(5.31e-05)]_24 chr17:27139546-27139626 1.73e-01 80 chr19:12405679-12405759 9.04e-05 12_[+4(9.07e-06)]_60 chr16:16002055-16002135 5.40e-03 34_[+1(2.68e-05)]_38 chr12:122028233-12202831 3.92e-03 22_[+2(2.19e-05)]_50 chr2:242088903-242088983 3.29e-05 23_[+4(9.07e-06)]_12_[+5(8.53e-05)]_\ 29 chr22:36784135-36784215 7.09e-03 80 chr12:49259696-49259776 3.31e-03 [+1(7.91e-05)]_52_[+5(1.35e-05)]_12 chr9:35072670-35072750 4.55e-05 [+1(1.35e-05)]_63_[+1(1.35e-05)]_1 chr19:12979731-12979811 2.71e-06 23_[+2(1.31e-05)]_11_[+1(2.68e-05)]_\ 30 chr13:73633001-73633081 1.53e-02 71_[+5(4.63e-05)]_1 chr17:79196832-79196912 1.12e-01 80 chr1:153895553-153895633 8.50e-04 64_[+2(1.31e-05)]_8 chr3:195163918-195163998 4.27e-04 5_[+1(2.68e-05)]_67 chr19:51182755-51182835 1.70e-05 40_[+1(1.35e-05)]_32 chr2:73298544-73298624 6.06e-03 10_[+3(6.16e-05)]_5_[+1(6.55e-05)]_\ 49 chr9:135905908-135905988 2.80e-01 59_[+2(6.82e-05)]_13 chr7:44122225-44122305 1.66e-02 80 chr16:66914333-66914413 2.80e-03 80 chr19:8408205-8408285 1.70e-01 80 chr22:41347665-41347745 6.00e-02 33_[+1(7.91e-05)]_39 chr5:162887471-162887551 8.86e-03 80 chr15:75744087-75744167 1.36e-02 72_[+3(6.16e-05)] chr19:45873873-45873953 6.25e-04 71_[+1(4.62e-05)]_1 chr16:30382404-30382484 3.33e-03 38_[+5(1.35e-05)]_34 chr19:19174404-19174484 2.39e-02 6_[+5(8.53e-05)]_66 chr9:133588123-133588203 4.01e-03 25_[+1(6.55e-05)]_47 chr16:67217582-67217662 3.98e-04 34_[+5(1.35e-05)]_38 chr16:74729891-74729971 6.63e-02 33_[+1(6.55e-05)]_39 chrX:47420479-47420559 1.15e-02 80 chr16:3054040-3054120 1.18e-01 48_[+2(2.19e-05)]_24 chr6:160183367-160183447 3.03e-03 80 chr4:6271459-6271539 1.60e-04 9_[+2(1.31e-05)]_63 chr6:32143891-32143971 3.15e-03 80 chr10:99205775-99205855 7.49e-02 11_[+2(4.41e-05)]_61 chr19:42901178-42901258 1.29e-01 80 chr1:161195567-161195647 5.17e-03 80 chr19:50372863-50372943 1.32e-01 80 chrX:153656874-153656954 3.79e-03 80 chr2:24270331-24270411 9.82e-02 80 chr14:60714763-60714843 8.73e-04 31_[+5(1.35e-05)]_41 chr20:40293406-40293486 4.97e-02 80 chr12:6960494-6960574 1.28e-01 80 chr21:43884121-43884201 1.02e-04 24_[+2(1.31e-05)]_10_[+2(1.31e-05)]_\ 30 chr12:53473222-53473302 1.68e-03 4_[+1(1.35e-05)]_32_[+1(4.62e-05)]_\ 28 chr5:153211684-153211764 4.99e-03 60_[+1(2.68e-05)]_12 chr7:152887710-152887790 4.29e-02 80 chr9:139780753-139780833 5.43e-02 2_[+1(4.62e-05)]_70 chr7:38217680-38217760 4.23e-05 51_[+4(9.07e-06)]_21 chr4:52709137-52709217 1.66e-02 80 chr9:94186147-94186227 1.06e-05 53_[+3(6.16e-05)]_19 chr19:2841345-2841425 2.41e-02 34_[+1(1.35e-05)]_24_[+1(1.35e-05)]_\ 6 chr10:131909408-13190948 4.65e-02 9_[+2(2.19e-05)]_63 chr12:51632973-51633053 7.88e-02 80 chr19:11456997-11457077 3.30e-02 65_[+3(6.16e-05)]_7 chr19:40728064-40728144 3.20e-02 30_[+1(2.68e-05)]_42 chr11:4629515-4629595 1.24e-03 30_[+5(1.35e-05)]_42 chr15:91835064-91835144 2.54e-03 80 chr2:198669202-198669282 1.65e-03 65_[+5(4.63e-05)]_7 chr22:37582436-37582516 1.04e-04 59_[+1(1.35e-05)]_13 chr9:130007507-130007587 5.56e-02 80 chr11:62521619-62521699 2.48e-02 80 chrX:154444566-154444646 3.07e-04 8_[+1(1.35e-05)]_64 chr19:12662379-12662459 9.21e-04 38_[+4(2.23e-05)]_34 chr6:26033877-26033957 6.54e-03 50_[+1(6.55e-05)]_22 chr1:24740271-24740351 2.28e-03 [+5(1.35e-05)]_72 chr10:28592105-28592185 6.11e-02 31_[+2(6.82e-05)]_26_[+2(2.19e-05)]_\ 7 chr19:13944526-13944606 8.59e-05 56_[+1(4.62e-05)]_16 chr1:150601675-150601755 1.19e-03 2_[+1(1.35e-05)]_15_[+4(2.23e-05)]_\ 47 chr19:36139065-36139145 2.53e-01 80 chr6:159495514-159495594 1.02e-01 80 chr14:21905446-21905526 7.31e-04 12_[+2(4.41e-05)]_60 chr10:101190560-10119064 5.54e-04 63_[+2(2.19e-05)]_9 chr19:19779524-19779604 1.44e-03 21_[+5(3.29e-05)]_24_[+1(1.35e-05)]_\ 19 chr19:54663610-54663690 9.90e-03 71_[+3(6.16e-05)]_1 chr3:119813818-119813898 1.74e-03 3_[+2(2.19e-05)]_69 chr12:109535795-10953587 1.88e-03 2_[+5(1.35e-05)]_70 chr20:45323368-45323448 4.88e-02 80 chr3:107241716-107241796 4.11e-02 80 chr19:36248881-36248961 1.66e-03 42_[+5(1.35e-05)]_30 chr16:84224645-84224725 7.48e-03 50_[+2(4.41e-05)]_22 chr3:185826924-185827004 8.56e-03 80 chr15:43213043-43213123 2.28e-03 38_[+2(5.31e-05)]_34 chr4:124242-124322 1.30e-01 80 chr19:55678045-55678125 2.02e-03 40_[+1(6.55e-05)]_32 chr7:100184164-100184244 5.43e-04 80 chr11:67121065-67121145 1.66e-03 18_[+5(1.35e-05)]_54 chr20:45035321-45035401 4.06e-01 80 chr2:68662190-68662270 9.24e-03 80 chrX:3732968-3733048 5.83e-03 3_[+5(1.35e-05)]_69 chr21:45175157-45175237 3.24e-02 16_[+2(1.31e-05)]_24_[+2(1.31e-05)]_\ 24 chr2:46771263-46771343 3.73e-02 56_[+2(6.82e-05)]_16 chr11:59383424-59383504 1.46e-03 18_[+1(1.35e-05)]_14_[+2(6.82e-05)]_\ 32 chr16:2932814-2932894 1.25e-01 80 chr17:78244795-78244875 1.83e-02 69_[+2(5.31e-05)]_3 chr22:35796024-35796104 1.02e-01 58_[+1(6.55e-05)]_14 chr2:27274459-27274539 8.86e-03 80 chr19:11849828-11849908 2.42e-05 12_[+3(6.16e-05)]_8_[+2(5.31e-05)]_\ 13_[+3(6.16e-05)]_9_[+4(9.07e-06)]_6 chr9:34329366-34329446 3.33e-03 46_[+5(1.35e-05)]_26 chr11:22647384-22647464 1.81e-02 30_[+2(5.31e-05)]_42 chr19:45803984-45804064 1.50e-02 28_[+2(6.82e-05)]_44 chr10:17497312-17497392 7.05e-03 41_[+1(1.35e-05)]_31 chr12:510666-510746 8.32e-03 80 chr17:41978025-41978105 8.49e-07 13_[+5(1.35e-05)]_30_[+2(1.31e-05)]_\ 21 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n05.farnam.hpc.yale.internal ********************************************************************************