******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/NFIC.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr22:22939485-22939565 1.0000 80 chr17:45646405-45646485 1.0000 80 chr15:20398852-20398932 1.0000 80 chr17:60548216-60548296 1.0000 80 chr17:36910114-36910194 1.0000 80 chr12:110950797-11095087 1.0000 80 chr6:84769033-84769113 1.0000 80 chr19:7683441-7683521 1.0000 80 chr17:38643118-38643198 1.0000 80 chr16:84853266-84853346 1.0000 80 chr10:70558415-70558495 1.0000 80 chr14:56066226-56066306 1.0000 80 chr5:31978712-31978792 1.0000 80 chr1:230281382-230281462 1.0000 80 chr1:185128089-185128169 1.0000 80 chr1:226037817-226037897 1.0000 80 chr6:164163154-164163234 1.0000 80 chr22:28307482-28307562 1.0000 80 chr2:109249996-109250076 1.0000 80 chrX:38508620-38508700 1.0000 80 chr3:48080256-48080336 1.0000 80 chr15:42868155-42868235 1.0000 80 chr6:74102069-74102149 1.0000 80 chr6:164114331-164114411 1.0000 80 chr11:75187303-75187383 1.0000 80 chr10:14480229-14480309 1.0000 80 chr1:16576369-16576449 1.0000 80 chr5:145593165-145593245 1.0000 80 chr12:111851038-11185111 1.0000 80 chr3:182251341-182251421 1.0000 80 chr1:185690837-185690917 1.0000 80 chr10:61000481-61000561 1.0000 80 chr19:5955044-5955124 1.0000 80 chr7:66725252-66725332 1.0000 80 chr3:128102495-128102575 1.0000 80 chr3:142889716-142889796 1.0000 80 chr12:120529322-12052940 1.0000 80 chr1:155056652-155056732 1.0000 80 chr6:168212496-168212576 1.0000 80 chr9:98665833-98665913 1.0000 80 chr10:106016584-10601666 1.0000 80 chr3:170021678-170021758 1.0000 80 chr20:39099099-39099179 1.0000 80 chr6:84695588-84695668 1.0000 80 chr1:155066466-155066546 1.0000 80 chr6:36056181-36056261 1.0000 80 chr5:131699157-131699237 1.0000 80 chr20:44884243-44884323 1.0000 80 chr18:12375590-12375670 1.0000 80 chr6:167418985-167419065 1.0000 80 chr16:75607178-75607258 1.0000 80 chr3:38199210-38199290 1.0000 80 chr2:10367929-10368009 1.0000 80 chr5:138977548-138977628 1.0000 80 chr6:90186129-90186209 1.0000 80 chr8:42534724-42534804 1.0000 80 chr18:12539296-12539376 1.0000 80 chr4:129709344-129709424 1.0000 80 chr17:73507962-73508042 1.0000 80 chr1:223919294-223919374 1.0000 80 chr4:81018722-81018802 1.0000 80 chr6:49574944-49575024 1.0000 80 chr1:47935202-47935282 1.0000 80 chr1:62274748-62274828 1.0000 80 chr14:77414058-77414138 1.0000 80 chr10:135173361-13517344 1.0000 80 chr5:139129014-139129094 1.0000 80 chr18:58756124-58756204 1.0000 80 chr12:56544496-56544576 1.0000 80 chr10:74655154-74655234 1.0000 80 chr15:92012991-92013071 1.0000 80 chr7:111842955-111843035 1.0000 80 chr2:57985980-57986060 1.0000 80 chr11:59609954-59610034 1.0000 80 chr17:73154229-73154309 1.0000 80 chr6:67831204-67831284 1.0000 80 chr1:27442882-27442962 1.0000 80 chr2:219184837-219184917 1.0000 80 chr10:13743750-13743830 1.0000 80 chr5:81032036-81032116 1.0000 80 chr6:27360560-27360640 1.0000 80 chr3:52265627-52265707 1.0000 80 chr6:86310605-86310685 1.0000 80 chr11:70040042-70040122 1.0000 80 chr10:49592780-49592860 1.0000 80 chr19:58153936-58154016 1.0000 80 chr1:212911073-212911153 1.0000 80 chr11:123105930-12310601 1.0000 80 chr1:213088748-213088828 1.0000 80 chr8:80872545-80872625 1.0000 80 chr1:46341826-46341906 1.0000 80 chr10:127457006-12745708 1.0000 80 chr15:59048298-59048378 1.0000 80 chr2:58467862-58467942 1.0000 80 chr1:11717887-11717967 1.0000 80 chr11:50017301-50017381 1.0000 80 chr9:90431106-90431186 1.0000 80 chr17:36375498-36375578 1.0000 80 chr12:4681029-4681109 1.0000 80 chr12:66018483-66018563 1.0000 80 chr17:30660373-30660453 1.0000 80 chr20:32026428-32026508 1.0000 80 chr8:60576766-60576846 1.0000 80 chr2:219187503-219187583 1.0000 80 chr6:110529022-110529102 1.0000 80 chr8:61664332-61664412 1.0000 80 chr2:20553382-20553462 1.0000 80 chr1:36794418-36794498 1.0000 80 chr4:84160140-84160220 1.0000 80 chr12:121842702-12184278 1.0000 80 chr1:235113813-235113893 1.0000 80 chr6:80842842-80842922 1.0000 80 chrX:39615085-39615165 1.0000 80 chr19:49043023-49043103 1.0000 80 chr7:102948412-102948492 1.0000 80 chr2:69690090-69690170 1.0000 80 chr1:61546936-61547016 1.0000 80 chr4:155360535-155360615 1.0000 80 chr15:64854342-64854422 1.0000 80 chr16:1321949-1322029 1.0000 80 chr13:49867052-49867132 1.0000 80 chr7:127443789-127443869 1.0000 80 chr2:189314866-189314946 1.0000 80 chr2:170504166-170504246 1.0000 80 chr22:32263078-32263158 1.0000 80 chr3:99587335-99587415 1.0000 80 chr2:120278731-120278811 1.0000 80 chr1:52968621-52968701 1.0000 80 chr16:75088262-75088342 1.0000 80 chr12:104781130-10478121 1.0000 80 chr1:55202065-55202145 1.0000 80 chr6:12861986-12862066 1.0000 80 chr11:57019373-57019453 1.0000 80 chr1:173496482-173496562 1.0000 80 chr9:37349065-37349145 1.0000 80 chr1:111323659-111323739 1.0000 80 chr2:179349545-179349625 1.0000 80 chr2:68815850-68815930 1.0000 80 chr7:128119295-128119375 1.0000 80 chr5:105176646-105176726 1.0000 80 chr9:101267326-101267406 1.0000 80 chr10:97821157-97821237 1.0000 80 chr4:24078593-24078673 1.0000 80 chr6:44073013-44073093 1.0000 80 chr12:127374806-12737488 1.0000 80 chr12:74502666-74502746 1.0000 80 chr8:38354962-38355042 1.0000 80 chr1:183998448-183998528 1.0000 80 chr5:53239920-53240000 1.0000 80 chr7:129624446-129624526 1.0000 80 chr9:101669200-101669280 1.0000 80 chr2:58269814-58269894 1.0000 80 chr20:36509225-36509305 1.0000 80 chr17:40228554-40228634 1.0000 80 chr3:43746360-43746440 1.0000 80 chr2:27228964-27229044 1.0000 80 chr1:89148747-89148827 1.0000 80 chr9:116104512-116104592 1.0000 80 chr10:18896615-18896695 1.0000 80 chr14:24895068-24895148 1.0000 80 chr2:179730433-179730513 1.0000 80 chr1:6656556-6656636 1.0000 80 chr5:41747504-41747584 1.0000 80 chr2:175177462-175177542 1.0000 80 chr6:34384042-34384122 1.0000 80 chr9:130742057-130742137 1.0000 80 chr12:65721019-65721099 1.0000 80 chr21:39251391-39251471 1.0000 80 chr3:50648139-50648219 1.0000 80 chr5:42621051-42621131 1.0000 80 chr10:126480797-12648087 1.0000 80 chr5:133802625-133802705 1.0000 80 chr12:69983023-69983103 1.0000 80 chr5:153603056-153603136 1.0000 80 chr7:32977401-32977481 1.0000 80 chr16:30437836-30437916 1.0000 80 chr17:44820325-44820405 1.0000 80 chr12:57639184-57639264 1.0000 80 chr19:53400206-53400286 1.0000 80 chr7:128163458-128163538 1.0000 80 chr7:2064085-2064165 1.0000 80 chr16:23530106-23530186 1.0000 80 chr1:183014577-183014657 1.0000 80 chr13:113812408-11381248 1.0000 80 chr19:10382331-10382411 1.0000 80 chr1:153853643-153853723 1.0000 80 chr10:89346129-89346209 1.0000 80 chr13:67798485-67798565 1.0000 80 chr1:67907041-67907121 1.0000 80 chr5:16406899-16406979 1.0000 80 chr11:111667898-11166797 1.0000 80 chr6:118823480-118823560 1.0000 80 chr3:41074367-41074447 1.0000 80 chr1:166664521-166664601 1.0000 80 chr6:43404429-43404509 1.0000 80 chr5:96264763-96264843 1.0000 80 chr3:13459669-13459749 1.0000 80 chr1:168248646-168248726 1.0000 80 chr6:111752341-111752421 1.0000 80 chr11:110350668-11035074 1.0000 80 chr12:111137485-11113756 1.0000 80 chr15:63729155-63729235 1.0000 80 chr2:33050442-33050522 1.0000 80 chr16:15886630-15886710 1.0000 80 chr17:57698475-57698555 1.0000 80 chr3:159819938-159820018 1.0000 80 chr19:7764425-7764505 1.0000 80 chr21:27089996-27090076 1.0000 80 chr1:174932800-174932880 1.0000 80 chr5:32218078-32218158 1.0000 80 chr6:2770606-2770686 1.0000 80 chr5:179297717-179297797 1.0000 80 chr2:130430975-130431055 1.0000 80 chr8:87542566-87542646 1.0000 80 chr1:206629271-206629351 1.0000 80 chr19:52028080-52028160 1.0000 80 chr7:77793962-77794042 1.0000 80 chr21:35916380-35916460 1.0000 80 chr1:204527739-204527819 1.0000 80 chr15:80325987-80326067 1.0000 80 chr16:50357558-50357638 1.0000 80 chr10:103305795-10330587 1.0000 80 chr3:25861922-25862002 1.0000 80 chr1:91023411-91023491 1.0000 80 chr1:181096371-181096451 1.0000 80 chr3:71235312-71235392 1.0000 80 chr5:109390096-109390176 1.0000 80 chr10:43230165-43230245 1.0000 80 chr17:18768470-18768550 1.0000 80 chr15:41533575-41533655 1.0000 80 chr17:58719291-58719371 1.0000 80 chr16:70457854-70457934 1.0000 80 chr19:11087745-11087825 1.0000 80 chr2:58821472-58821552 1.0000 80 chr11:72125376-72125456 1.0000 80 chrX:44806132-44806212 1.0000 80 chr1:171724271-171724351 1.0000 80 chr1:52719237-52719317 1.0000 80 chr22:42356554-42356634 1.0000 80 chr8:97287686-97287766 1.0000 80 chr6:118981542-118981622 1.0000 80 chr6:660308-660388 1.0000 80 chr18:43336128-43336208 1.0000 80 chr22:23337501-23337581 1.0000 80 chr4:124533105-124533185 1.0000 80 chr4:17546514-17546594 1.0000 80 chr15:34940233-34940313 1.0000 80 chr1:159851802-159851882 1.0000 80 chr6:34158045-34158125 1.0000 80 chr1:182299493-182299573 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_NFIC/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/NFIC.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.257 C 0.243 G 0.243 T 0.257 Background letter frequencies (from file dataset with add-one prior applied): A 0.257 C 0.243 G 0.243 T 0.257 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGCCARVW MEME-1 width = 8 sites = 249 llr = 1755 E-value = 5.9e-270 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2:::a624 pos.-specific C ::aa::21 probability G 1a:::341 matrix T 7:::::14 bits 2.0 **** 1.8 **** 1.6 **** 1.4 **** Relative 1.2 **** Entropy 1.0 ***** (10.2 bits) 0.8 ****** 0.6 ****** 0.4 ****** 0.2 ******** 0.0 -------- Multilevel TGCCAAGA consensus GAT sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:77793962-77794042 4 1.52e-05 ATC TGCCAAGA CAACCTCCCC chr3:159819938-159820018 37 1.52e-05 TTTGGCCACG TGCCAAGA TTATCCATAT chr11:110350668-11035074 52 1.52e-05 CTTGGCATTG TGCCAAGA GACTGCTTCT chr6:111752341-111752421 38 1.52e-05 TTTGGCCACG TGCCAAGA TTATCCATCT chr6:118823480-118823560 33 1.52e-05 TCTGGCCCCA TGCCAAGA TTACCCATAT chr1:6656556-6656636 51 1.52e-05 cctggctgtg tgccaaga aaactatcca chr6:44073013-44073093 34 1.52e-05 GTTGGCAGCA TGCCAAGA CCAGGTCAGA chr1:55202065-55202145 54 1.52e-05 cttggctcac tgccaaga tcaacctcct chr15:64854342-64854422 52 1.52e-05 TTTGGCATAG TGCCAAGA ACATTGATAA chr8:61664332-61664412 52 1.52e-05 GTTGGCAAAA TGCCAAGA AATTGACAGC chr8:60576766-60576846 54 1.52e-05 gctggcaagg tgccaaga aactggatcc chr17:36375498-36375578 28 1.52e-05 CTTGGCAACT TGCCAAGA TTTCAGTGTT chr9:90431106-90431186 52 1.52e-05 tttggcaaag tgccaaga gcacacattg chr1:46341826-46341906 31 1.52e-05 attggcagtg tgccaaga atggtttaaa chr19:58153936-58154016 52 1.52e-05 GTTGGCAGCT TGCCAAGA AGGACTGTCT chr6:86310605-86310685 54 1.52e-05 CTTGGCAAAT TGCCAAGA TTTTTCAAGG chr11:59609954-59610034 50 1.52e-05 TCTGGCACAG TGCCAAGA TCGCTAGACT chr2:57985980-57986060 36 1.52e-05 CTTGGCCTAT TGCCAAGA AAGGAAGTAT chr15:20398852-20398932 33 1.52e-05 TTTGGCAGCT TGCCAAGA TGGGAAGGGA chr1:166664521-166664601 34 3.04e-05 TCTGGCAGTC TGCCAAGT CAATAGCAGC chr21:39251391-39251471 32 3.04e-05 TCTGGCTAGG TGCCAAGT ACAGTAGTGA chr5:41747504-41747584 41 3.04e-05 gttggcactg tgccaagt gttagataaa chr2:68815850-68815930 55 3.04e-05 TCTGGCATTT TGCCAAGT AATGAGTCTT chr1:52968621-52968701 54 3.04e-05 cctggcaccg tgccaagt gctttacaga chr4:84160140-84160220 52 3.04e-05 aTTggcacac tgccaagt atcttgcagg chr2:219187503-219187583 30 3.04e-05 cctggcagag tgccaagt acataggagg chr12:66018483-66018563 33 3.04e-05 TTTGGCACTT TGCCAAGT TTTAGTTCTG chr11:123105930-12310601 48 3.04e-05 CCTGGCAGCG TGCCAAGT GCTCTTGAGT chr10:49592780-49592860 45 3.04e-05 GTTGGCCAGG TGCCAAGT CCAGGAATGG chr2:109249996-109250076 36 3.04e-05 TTTGGCCTCT TGCCAAGT TAGTTTTGAT chr17:45646405-45646485 33 3.04e-05 CTTGGCAAGT TGCCAAGT CTCAAATGTT chr5:109390096-109390176 53 4.56e-05 TTTGGCATCT TGCCAACA GCCTCAGTGT chr2:33050442-33050522 51 4.56e-05 CTTGGCCCTG TGCCAACA TTGTGTTCTG chr11:111667898-11166797 31 4.56e-05 actggcttgc tgccaaca aacagaatga chr1:153853643-153853723 30 4.56e-05 CCTGGCATGA TGCCAACA CTCAGTCAGC chr3:43746360-43746440 49 4.56e-05 TTTGGCTGGT TGCCAACA AAATTTTGAA chr10:127457006-12745708 52 4.56e-05 TTTGGCATCT TGCCAACA GAATAGACTA chr6:67831204-67831284 54 4.56e-05 CTTGGCAAAA TGCCAACA ATACTTTATT chr20:39099099-39099179 46 4.56e-05 GTTGGCACAG TGCCAACA CTTAGTGTTT chr3:182251341-182251421 51 4.56e-05 cctggcacac tgccaaca tgccattcat chr4:124533105-124533185 53 9.13e-05 cttggctcac tgccaact ctgcctcccg chr18:43336128-43336208 35 9.13e-05 GTTGGCACAG TGCCAGGA AACCTGGCTA chr8:97287686-97287766 33 9.13e-05 TTTGGCTATT TGCCAACT TTCCCTTCCC chrX:44806132-44806212 47 9.13e-05 tctggcacaa tgccaact ttcttttGAT chr11:72125376-72125456 50 9.13e-05 CCTGGCTGGC TGCCAGGA AACCTGTCAC chr17:18768470-18768550 34 9.13e-05 TTTGGCCCAC TGCCAAAA TTTGGGTGTG chr21:27089996-27090076 45 9.13e-05 TCTGGATGGC TGCCAACT TCTCAAATGC chr19:7764425-7764505 31 9.13e-05 CCTGGCTCTG TGCCAGGA AAGTCAGTCC chr16:15886630-15886710 33 9.13e-05 cttggctcag tgccaact ttctgcctcc chr15:63729155-63729235 44 9.13e-05 ACTGGCCTGC TGCCAACT CCCCAGATCT chr1:168248646-168248726 51 9.13e-05 cttggcactc tgccaact cttccccgac chr5:16406899-16406979 37 9.13e-05 TCTGGCACTA TGCCAACT CTGTGGCACA chr7:128163458-128163538 50 9.13e-05 actggcagca tgccaggA ATGGGGGAGG chr7:32977401-32977481 34 9.13e-05 cttggcgagg tgccagga ctttgtccat chr5:42621051-42621131 53 9.13e-05 ATTGGCCCAG TGCCAAAA TGTGATTCTA chr12:65721019-65721099 40 9.13e-05 CTTGGCACTA TGCCAGGA TGCTGAAATT chr9:130742057-130742137 48 9.13e-05 CCTGGCACCC TGCCAACT GCCTCAGGCC chr4:24078593-24078673 66 9.13e-05 aaaagttctt tgccaaaa ccagaaa chr9:101267326-101267406 33 9.13e-05 tttggcccaa tgccaaaa aaccccatag chr3:99587335-99587415 36 9.13e-05 TTTGGCACTG TGCCAACT GCTTCATCAC chr22:32263078-32263158 36 9.13e-05 CTTGGCTCTT TGCCAGGA ATCTACGTGC chr4:155360535-155360615 38 9.13e-05 tttggcaatt tgCCAAAA TGTTATGAAA chr1:61546936-61547016 63 9.13e-05 CCCTCTTTTC TGCCAAAA CAATACTTTA chr20:32026428-32026508 33 9.13e-05 cttggctcta tgccaact ctccctccac chr12:4681029-4681109 30 9.13e-05 actggctcag tgccaact ccccagaact chr11:50017301-50017381 52 9.13e-05 gttggccctt tgccaaaa cactttagct chr1:11717887-11717967 33 9.13e-05 ttTGGCACTT TGCCAAAA ATGCTTCTCA chr15:59048298-59048378 51 9.13e-05 CTTGGCACAG TGCCAAAA TATAGCCAAC chr5:81032036-81032116 53 9.13e-05 ATTGGCGCTA TGCCAAAA GCCCTGTTTG chr12:56544496-56544576 51 9.13e-05 CTTGGCAAAA TGCCAAAA ATGGGAAAAG chr5:139129014-139129094 51 9.13e-05 gctggccctg tgccaaaa catcatctca chr17:73507962-73508042 47 9.13e-05 CTGGGCAGGT TGCCAAAA ACAACACAGA chr8:42534724-42534804 33 9.13e-05 cttggctcac tgccaact ctgcctcctg chr20:44884243-44884323 46 9.13e-05 CCTGGCAGCC TGCCAACT CTTCACTGCT chr3:142889716-142889796 52 9.13e-05 CTTGGCTGGG TGCCAAAA TGTAACATAA chr6:74102069-74102149 34 9.13e-05 cttggctcac tgccaact tctgcctccc chr22:28307482-28307562 34 9.13e-05 ACTGGCACTT TGCCAACT AAAGCTGAGC chr6:84769033-84769113 50 9.13e-05 GTTGGCTCTT TGCCAGGA ATTCATATCA chr17:60548216-60548296 50 9.13e-05 actggcagca tgccaggA ATGGGGGAGG chr4:17546514-17546594 33 1.22e-04 tttggcacaa tgccaggt cctggggata chr22:23337501-23337581 53 1.22e-04 tttggctgac tgccaaat tacacaggta chr1:91023411-91023491 30 1.22e-04 TCTGGCACAG TGCCAAAT AGCTGTACTA chr1:67907041-67907121 60 1.22e-04 CCAGGAAAAA TGCCAAAT GTCAGAGGCC chr10:89346129-89346209 53 1.22e-04 tttggcagcc tgccaaat CCTACTTATT chr16:23530106-23530186 55 1.22e-04 tctggcaacg tgccaggt gctatggtta chr5:133802625-133802705 52 1.22e-04 CTTGGCTTGT TGCCAAAT GTGGTGTTCC chr6:34384042-34384122 31 1.22e-04 ACTGGCATTG TGCCAGGT ATATGTTTGC chr12:74502666-74502746 34 1.22e-04 TCTGGCACTG TGCCAAAT GGCTAAAGTT chr9:37349065-37349145 53 1.22e-04 CTTGGCACAA TGCCAAAT TGAATGAGGA chr12:104781130-10478121 51 1.22e-04 GCTGGCAAAC TGCCAAAT TATTTCATCT chr2:120278731-120278811 33 1.22e-04 ATTGGCAGTT TGCCAAAT GTCATGGATT chr2:189314866-189314946 47 1.22e-04 TCTGGCACTG TGCCAGGT CATTTAGGCT chr1:36794418-36794498 31 1.22e-04 cctggcactc tgccaaat gctatgcaca chr6:27360560-27360640 52 1.22e-04 cttggccttg tgccaaat tacttaactt chr7:111842955-111843035 33 1.22e-04 TCTGGCAGCT TGCCAGGT AGCGTTTGCT chr1:47935202-47935282 34 1.22e-04 TCTGGCACTT TGCCAGGT ACTAGGTCAT chr1:185690837-185690917 51 1.22e-04 ATTGGCATTA TGCCAAAT TTTTGTTTCA chr17:36910114-36910194 31 1.22e-04 ATTGGCAATG TGCCAAAT CTATGGGAGC chr1:206629271-206629351 53 1.36e-04 CCTGGCCCCG TGCCAGCA GGATGACAAG chr9:116104512-116104592 52 1.36e-04 cttggcacac tgccagca tgggaagagg chr6:80842842-80842922 52 1.36e-04 GTTGGCATTG TGCCAGCA CTTGAACTGC chr7:66725252-66725332 30 1.36e-04 cctggcaaaa tgccagca ccttgatctt chr15:42868155-42868235 53 1.36e-04 GCTGGCGTCC TGCCAGCA GGAGTTTCGA chr6:164163154-164163234 54 1.36e-04 CCTGGCAGCA TGCCAGCA GCGATGGCAC chr1:159851802-159851882 31 1.66e-04 GCTGGCTCTC TGCCAGCT TGGCTCACTG chr10:43230165-43230245 32 1.66e-04 TTTGGCTCCC TGCCAGCT CTTGAGGTTC chr21:35916380-35916460 33 1.66e-04 cttggcaact tgccagaa ttcttgccct chr12:57639184-57639264 47 1.66e-04 cttggctcag tgccagct ccgcctccag chr16:30437836-30437916 33 1.66e-04 cttggctcac tgccagct ctgcctcccg chr5:153603056-153603136 36 1.66e-04 tttggctctg tgccagaa agcaccatga chr12:127374806-12737488 52 1.66e-04 CTTGGCTCTT TGCCAGAA GAATATGTTA chr6:12861986-12862066 52 1.66e-04 CTTGGCTCTA TGCCAGAA TAGCTCATTT chr16:1321949-1322029 70 1.66e-04 GTTGGCACCC TGCCAGCT GGT chr12:121842702-12184278 32 1.66e-04 CCTGGCACTG TGCCAGAA AGAGAGCTGG chr10:74655154-74655234 32 1.66e-04 TTTGGCTCAA TGCCAGAA GCATGATAAA chr1:62274748-62274828 52 1.66e-04 GTTGGCAAGG TGCCAGAA GACAACTTCG chr5:138977548-138977628 15 1.66e-04 cttggctcac tgccagct ccacctcccg chr2:10367929-10368009 34 1.66e-04 cttggctcac tgccagct ccgcctcccg chr18:12375590-12375670 31 1.66e-04 cttggctcac tgccagct ccaccgccca chr1:155066466-155066546 31 1.66e-04 ATTGGCAGTT TGCCAGCT AGGGTGTGGG chr12:120529322-12052940 31 1.66e-04 CCTGGCACAG TGCCAGCT CTGAGGGGCA chr6:164114331-164114411 33 1.66e-04 cttggctcac tgccagct ccgcctcccg chr12:110950797-11095087 50 1.66e-04 cttggctcat tgccagct ccgcctcctg chr6:118981542-118981622 56 1.95e-04 GTTGGCAGAT TGCCAGAT AAGGGGCCAT chr15:41533575-41533655 30 1.95e-04 cctggcactt tgccaagc attttccttt chr1:181096371-181096451 54 1.95e-04 cctggcactg tgccaagc agcctagact chr14:24895068-24895148 34 1.95e-04 CTTGGCACAG TGCCAGAT CTTCTTGGAA chr1:183998448-183998528 32 1.95e-04 gctggcagct tgccaagc ctgctggttc chr2:20553382-20553462 53 1.95e-04 cttggcccca tgccagat cagcttaatc chr1:27442882-27442962 48 1.95e-04 CCTGGCACAG TGCCAAGC ACCCTGAAGA chr6:84695588-84695668 32 1.95e-04 TTTGGCACTT TGCCAAGC TGATGAACCC chr8:87542566-87542646 36 2.26e-04 tttggcatgt tgccaagg ctggtcttga chr3:41074367-41074447 33 2.26e-04 ATTGGCAGGG TGCCAAGG TCCAAGCCTG chr2:179349545-179349625 2 2.26e-04 G TGCCAAGG AAAGTCATCA chr4:129709344-129709424 54 2.26e-04 CTTGGCATTG TGCCAAGG CTCCTTTTTC chr6:168212496-168212576 39 2.26e-04 CCTGGCTTCT TGCCAAGG AAAGAACAGa chr10:61000481-61000561 30 2.26e-04 CCTGGAACAT TGCCAATA TCTATTTTAG chr16:70457854-70457934 52 2.57e-04 gctggcagtg agccaaga tcgtgccact chr1:183014577-183014657 33 2.57e-04 attggcaact tgccaatt gaaaaaaaag chr2:27228964-27229044 31 2.57e-04 gctggcactg agccaaga ttgcaccact chr17:40228554-40228634 31 2.57e-04 gctggcagtg agccaaga tcgcgccact chr2:58269814-58269894 34 2.57e-04 GTTGGCATAC AGCCAAGA AAGTCCTTTT chr7:129624446-129624526 58 2.57e-04 tttggatcat tgccaatt ttttgctcct chr8:38354962-38355042 50 2.57e-04 gttggcagtg agccaaga tcatgtcact chr2:69690090-69690170 31 2.57e-04 CTTGGCACAG TGCCAATT ATTTATCTTT chr7:102948412-102948492 47 2.57e-04 TTTGGCACTA TGCCAATT TACATATTGT chr1:212911073-212911153 35 2.57e-04 ATTGGCTACA TGCCAATT TTTATTTCAA chr17:73154229-73154309 55 2.57e-04 gctggcagtg agccaaga tttcgccact chr3:170021678-170021758 52 2.57e-04 gttggcagtg agccaaga ttagcctggg chr10:14480229-14480309 34 2.57e-04 cttggcaatg agccaaga tcgtgacact chr5:31978712-31978792 54 2.57e-04 gttggcagtg agccaaga ttgcaccgct chr22:22939485-22939565 53 2.57e-04 gctggcagcg agccaaga tcgcgccact chr15:34940233-34940313 30 2.72e-04 TCTggcaggc agccaagt tctctcattc chr22:42356554-42356634 53 2.72e-04 tctggcctgc agccaagt ttgatttgtc chr13:113812408-11381248 31 2.72e-04 attggcacac agccaagt gttcattcat chr1:173496482-173496562 53 2.72e-04 TTTGGCAGTG AGCCAAGT GAGCAGCTAG chr10:135173361-13517344 36 2.72e-04 CTTGGCTTCC AGCCAAGT GTGGCTGACA chr19:10382331-10382411 54 2.87e-04 CTTGGCTCTG TGCCAACC CAACAAGGCT chr6:110529022-110529102 33 2.87e-04 CTTGGCACCA TGCCAACC CTGTAGAAAT chr4:81018722-81018802 45 2.87e-04 GTTGGCCACA TGCCAACC AGCATTATTC chr14:56066226-56066306 33 2.87e-04 cttggctcac tgccaacc tctgccgcac chr1:182299493-182299573 31 3.30e-04 cttggcatgg tgccaggc acaACATGAT chr12:111137485-11113756 36 3.30e-04 CCTGGccgtg tgccaggc gctgcgccgg chr19:49043023-49043103 55 3.30e-04 cttggcactg tgccaggc actgagtatg chr1:235113813-235113893 31 3.30e-04 CTTGGCACTG TGCCAGGC AGGAGAGAGA chr11:70040042-70040122 33 3.30e-04 Actggcacag tgccaggc acagaggagg chr14:77414058-77414138 48 3.30e-04 CTTGGCAGAA TGCCAGGC ATAGAATGAC chr9:98665833-98665913 52 3.30e-04 TTTGGCATAA TGCCAAAC TTTAATACTT chr3:128102495-128102575 52 3.30e-04 CCTGGCCTCG TGCCAGGC CCTGAGTCAG chr19:11087745-11087825 56 3.89e-04 GTGCATTGCT TGCCAGGG TGGGCGTGTC chr1:204527739-204527819 32 3.89e-04 TTTGGCAGGA TGCCAAAG AAGAGTGAAT chr20:36509225-36509305 34 3.89e-04 GCTGGCAACA TGCCAGGG CCCATGGTTA chr10:97821157-97821237 36 3.89e-04 TCTGGCACAG TGCCAGGG TTTAGCAGCC chr13:49867052-49867132 32 3.89e-04 ATTGGCTCCA TGCCAGGG CTGTGACTGC chr15:92012991-92013071 54 3.89e-04 TTTggcagag tgccaggg tgagagggag chr1:185128089-185128169 54 3.89e-04 gttggcaaga tgccagta gttcttccct chr17:58719291-58719371 54 4.64e-04 ATTGGCTGTC TGCCAGTT TCCAAGGCAC chr3:25861922-25862002 31 4.64e-04 attggcaacc tgccagtt atgcaaaagc chr2:130430975-130431055 32 4.64e-04 TCTGGCACTG AGCCAAAA ATAGAGTTGC chr5:32218078-32218158 33 4.64e-04 TTTGGCCAGC AGCCAAAA TGGAAAGAGA chr1:174932800-174932880 34 4.64e-04 tctggctcac tgccagtt tttgtaaacc chr6:43404429-43404509 30 4.64e-04 CCTGGCAATA AGCCAACT CCTGTTCACC chr12:69983023-69983103 57 4.64e-04 TTTGGCAttt tgccagtt tggtggggaa chr2:179730433-179730513 33 4.64e-04 TTTGGCAATG TGCCAGTT CTCACCCCTC chr10:18896615-18896695 51 4.64e-04 ATTGGCATGG GGCCaaga atacaggctt chr5:53239920-53240000 50 4.64e-04 TCTGGCACAG AGCCAAAA ACACAACAGG chr7:128119295-128119375 30 4.64e-04 GCTGGCACCT AGCCAAAA TCAAAATCAT chr16:75088262-75088342 32 4.64e-04 CCTGGCACCC TGCCAGTT CTGTCTGCTT chr7:127443789-127443869 33 4.64e-04 TTTGGCAACC AGCCAAAA ATACCTTCCT chr17:30660373-30660453 49 4.64e-04 CTTGGCACAC AGCCAACT AATTACCTTT chr10:13743750-13743830 47 4.64e-04 CTTGGCACTG GGCCAAGA CAAACTTCGC chr1:223919294-223919374 48 4.64e-04 CCTGGCACGG AGCCAGGA ATGCACCAAC chr5:105176646-105176726 35 5.09e-04 attggcaagc agccaaat tgccattgcc chr10:106016584-10601666 51 5.09e-04 TTTGGCAAGG AGCCAAAT AATTTTTTTT chr15:80325987-80326067 35 5.23e-04 TCTGGCACCC TGCCAGCC CCAGCTCCTA chr3:38199210-38199290 55 5.23e-04 GTTGGCATGG TGCCAGCC TGGGAGAACC chr6:167418985-167419065 47 5.23e-04 GTTGGAACGG TGCCAGCC AAGCGTGGGA chr2:219184837-219184917 55 5.51e-04 cctggcacta tgccagac actggagagt chr18:12539296-12539376 55 5.51e-04 tttggcctgc tgccagcg atgtaagaca chr17:38643118-38643198 54 5.51e-04 cctggcatag tgccagac acacaatagt chr1:89148747-89148827 36 5.94e-04 CCTGGCATCA GGCCAACA GAGTTACATG chr8:80872545-80872625 54 5.94e-04 CCTGGCTCTG TGCCAGAG CCTAATTAAG chr6:660308-660388 21 6.82e-04 cctggcaaaa ggccaact agcaccaaac chr1:52719237-52719317 38 6.82e-04 TTTGGCAAGC AGCCAGAA TACTTAAAAA chr2:58821472-58821552 35 6.82e-04 TCTGGCCCTG AGCCAGCT GATCTCATCC chr16:50357558-50357638 33 6.82e-04 CTTGGCACGT GGCCAAAA ACTCATGGAT chr19:53400206-53400286 51 6.82e-04 gttggccaag ggccaaaa atccttcatc chr10:126480797-12648087 44 6.82e-04 CTTGGCAAGA GGCCAACT TCGTTTCTGG chr2:170504166-170504246 47 6.82e-04 TTTGGCACCT GGCCAaaa atttaaaact chrX:39615085-39615165 53 6.82e-04 CCTGGCACCC AGCCAGCT GGGAGGCTGG chr2:58467862-58467942 34 6.82e-04 CTTGGCAAAG GGCCAAAA TAAGGTTTTC chr3:52265627-52265707 55 6.82e-04 GCCAGCCCGG GGCCAGGA CGCAGCAGGT chr10:70558415-70558495 36 6.82e-04 CTTGGCAAGA GGCCAGGA ACTAgccggg chr19:7683441-7683521 47 6.82e-04 TTTGGCATGG GGCCAACT TCTAACTTGA chr5:96264763-96264843 54 7.56e-04 cctggcacca tgccaatg tgtaaaaccc chr16:75607178-75607258 36 7.56e-04 TTTGGCTGCA GGCCAAAT TATTCTGACT chr5:131699157-131699237 30 7.56e-04 actggcctcc tgccaatg tctctgactt chr1:230281382-230281462 30 7.56e-04 CTTGGCATAG TGCCAATG GGGGCCTTGC chr19:52028080-52028160 37 7.86e-04 attggcatgg agccaagg gaggctcccc chr6:90186129-90186209 54 7.86e-04 gctggCACCC AGCCAATA TGTGTGTATT chr19:5955044-5955124 52 7.86e-04 ATTGGCTGTG AGCCAATA TTTTGATAAG chr10:103305795-10330587 34 8.02e-04 tctggcaggc agccaatt cagtaagaac chr7:2064085-2064165 54 8.02e-04 attggcggtg agccaatt tccttcaact chr17:44820325-44820405 31 8.02e-04 CTTGGCTCTG AGCCAATT TCCTCCTCAG chrX:38508620-38508700 54 8.02e-04 TTTGGCAACA AGCCAATT CCTTCAAGAT chr13:67798485-67798565 49 8.16e-04 ATTGGCACCT GGCCAGCA CAAGCGACAT chr6:34158045-34158125 34 8.73e-04 GCTGGCCATG TGCCAGTC TGGAGAGCGA chr6:2770606-2770686 51 8.73e-04 CCTGGCAGGG GGCCAGAA AGGGCCGGGC chr3:13459669-13459749 32 8.73e-04 TCTGGCATCA GGCCAGAA ATAGGAGCCT chr11:75187303-75187383 54 8.73e-04 GCTggcactg tgccagtc acgttacagc chr17:57698475-57698555 55 9.58e-04 TCTGGCAACA TGCCAGTG GCGGGCCTAG chr2:175177462-175177542 35 9.58e-04 gttggcacac agccaaac tcattcattt chr1:171724271-171724351 52 1.03e-03 GCTGGCATTA GGCCAAGG ACAGAGATAA chr3:71235312-71235392 38 1.03e-03 ATGGAGCCAG GGCCAAGG ACATCTGTCT chr9:101669200-101669280 53 1.03e-03 CCTGGCAAAG GGCCAAGG ATCTGGGGCC chr6:49574944-49575024 34 1.03e-03 CCTGGATCTC AGCCAAAG AAAGTCTCAC chr3:48080256-48080336 54 1.03e-03 gttggctgtA ggccaagg gcgatggctc chr1:226037817-226037897 55 1.03e-03 TTTGGCAAGG AGCCAGGG CTGGGGCTGC chr6:36056181-36056261 37 1.16e-03 gttggcaaag ggccaggc acagtgactc chr12:111851038-11185111 31 1.23e-03 cttggcatgg tgccatga gcctgtagtt chr5:145593165-145593245 53 1.23e-03 TTTGGCTTGG GGCCAAAG GTGTAGGACC chr3:50648139-50648219 32 1.27e-03 CTTGGCACCA GGCCAGTT GCGATAAGCA chr1:155056652-155056732 46 1.27e-03 GTTGGCATGA TGCCATGT GGAGTCTTGG chr1:111323659-111323739 65 1.49e-03 CTTGGCCTGG TTCCAAGA GCATCAGA chr1:16576369-16576449 26 1.75e-03 ATATGTTTTT TGGCAACT TGCCACCAAA chr5:179297717-179297797 56 2.86e-03 TGAGCCTTCC TGGCAGGG CTCCAGGGAA chr1:213088748-213088828 40 3.21e-03 GCCTGGAGAG AGCCATTT CCATTCCACA chr18:58756124-58756204 23 3.21e-03 TTTGGCTTAG ATCCAAAT AAGATGgaga chr16:84853266-84853346 31 3.21e-03 cttggcaccg cgccaggc gcatagtaag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:77793962-77794042 1.5e-05 3_[+1]_69 chr3:159819938-159820018 1.5e-05 36_[+1]_36 chr11:110350668-11035074 1.5e-05 51_[+1]_21 chr6:111752341-111752421 1.5e-05 37_[+1]_35 chr6:118823480-118823560 1.5e-05 32_[+1]_40 chr1:6656556-6656636 1.5e-05 50_[+1]_22 chr6:44073013-44073093 1.5e-05 33_[+1]_39 chr1:55202065-55202145 1.5e-05 53_[+1]_19 chr15:64854342-64854422 1.5e-05 51_[+1]_21 chr8:61664332-61664412 1.5e-05 51_[+1]_21 chr8:60576766-60576846 1.5e-05 53_[+1]_19 chr17:36375498-36375578 1.5e-05 27_[+1]_45 chr9:90431106-90431186 1.5e-05 51_[+1]_21 chr1:46341826-46341906 1.5e-05 30_[+1]_42 chr19:58153936-58154016 1.5e-05 51_[+1]_21 chr6:86310605-86310685 1.5e-05 53_[+1]_19 chr11:59609954-59610034 1.5e-05 49_[+1]_23 chr2:57985980-57986060 1.5e-05 35_[+1]_37 chr15:20398852-20398932 1.5e-05 32_[+1]_40 chr1:166664521-166664601 3e-05 33_[+1]_39 chr21:39251391-39251471 3e-05 31_[+1]_41 chr5:41747504-41747584 3e-05 40_[+1]_32 chr2:68815850-68815930 3e-05 54_[+1]_18 chr1:52968621-52968701 3e-05 53_[+1]_19 chr4:84160140-84160220 3e-05 51_[+1]_21 chr2:219187503-219187583 3e-05 29_[+1]_43 chr12:66018483-66018563 3e-05 32_[+1]_40 chr11:123105930-12310601 3e-05 47_[+1]_25 chr10:49592780-49592860 3e-05 44_[+1]_28 chr2:109249996-109250076 3e-05 35_[+1]_37 chr17:45646405-45646485 3e-05 32_[+1]_40 chr5:109390096-109390176 4.6e-05 52_[+1]_20 chr2:33050442-33050522 4.6e-05 50_[+1]_22 chr11:111667898-11166797 4.6e-05 30_[+1]_42 chr1:153853643-153853723 4.6e-05 29_[+1]_43 chr3:43746360-43746440 4.6e-05 48_[+1]_24 chr10:127457006-12745708 4.6e-05 51_[+1]_21 chr6:67831204-67831284 4.6e-05 53_[+1]_19 chr20:39099099-39099179 4.6e-05 45_[+1]_27 chr3:182251341-182251421 4.6e-05 50_[+1]_22 chr4:124533105-124533185 9.1e-05 52_[+1]_20 chr18:43336128-43336208 9.1e-05 34_[+1]_38 chr8:97287686-97287766 9.1e-05 32_[+1]_40 chrX:44806132-44806212 9.1e-05 46_[+1]_26 chr11:72125376-72125456 9.1e-05 49_[+1]_23 chr17:18768470-18768550 9.1e-05 33_[+1]_39 chr21:27089996-27090076 9.1e-05 44_[+1]_28 chr19:7764425-7764505 9.1e-05 30_[+1]_42 chr16:15886630-15886710 9.1e-05 32_[+1]_40 chr15:63729155-63729235 9.1e-05 43_[+1]_29 chr1:168248646-168248726 9.1e-05 50_[+1]_22 chr5:16406899-16406979 9.1e-05 36_[+1]_36 chr7:128163458-128163538 9.1e-05 49_[+1]_23 chr7:32977401-32977481 9.1e-05 33_[+1]_39 chr5:42621051-42621131 9.1e-05 52_[+1]_20 chr12:65721019-65721099 9.1e-05 39_[+1]_33 chr9:130742057-130742137 9.1e-05 47_[+1]_25 chr4:24078593-24078673 9.1e-05 65_[+1]_7 chr9:101267326-101267406 9.1e-05 32_[+1]_40 chr3:99587335-99587415 9.1e-05 35_[+1]_37 chr22:32263078-32263158 9.1e-05 35_[+1]_37 chr4:155360535-155360615 9.1e-05 37_[+1]_35 chr1:61546936-61547016 9.1e-05 62_[+1]_10 chr20:32026428-32026508 9.1e-05 32_[+1]_40 chr12:4681029-4681109 9.1e-05 29_[+1]_43 chr11:50017301-50017381 9.1e-05 51_[+1]_21 chr1:11717887-11717967 9.1e-05 32_[+1]_40 chr15:59048298-59048378 9.1e-05 50_[+1]_22 chr5:81032036-81032116 9.1e-05 52_[+1]_20 chr12:56544496-56544576 9.1e-05 50_[+1]_22 chr5:139129014-139129094 9.1e-05 50_[+1]_22 chr17:73507962-73508042 9.1e-05 46_[+1]_26 chr8:42534724-42534804 9.1e-05 32_[+1]_40 chr20:44884243-44884323 9.1e-05 45_[+1]_27 chr3:142889716-142889796 9.1e-05 51_[+1]_21 chr6:74102069-74102149 9.1e-05 33_[+1]_39 chr22:28307482-28307562 9.1e-05 33_[+1]_39 chr6:84769033-84769113 9.1e-05 49_[+1]_23 chr17:60548216-60548296 9.1e-05 49_[+1]_23 chr4:17546514-17546594 0.00012 32_[+1]_40 chr22:23337501-23337581 0.00012 52_[+1]_20 chr1:91023411-91023491 0.00012 29_[+1]_43 chr1:67907041-67907121 0.00012 59_[+1]_13 chr10:89346129-89346209 0.00012 52_[+1]_20 chr16:23530106-23530186 0.00012 54_[+1]_18 chr5:133802625-133802705 0.00012 51_[+1]_21 chr6:34384042-34384122 0.00012 30_[+1]_42 chr12:74502666-74502746 0.00012 33_[+1]_39 chr9:37349065-37349145 0.00012 52_[+1]_20 chr12:104781130-10478121 0.00012 50_[+1]_22 chr2:120278731-120278811 0.00012 32_[+1]_40 chr2:189314866-189314946 0.00012 46_[+1]_26 chr1:36794418-36794498 0.00012 30_[+1]_42 chr6:27360560-27360640 0.00012 51_[+1]_21 chr7:111842955-111843035 0.00012 32_[+1]_40 chr1:47935202-47935282 0.00012 33_[+1]_39 chr1:185690837-185690917 0.00012 50_[+1]_22 chr17:36910114-36910194 0.00012 30_[+1]_42 chr1:206629271-206629351 0.00014 52_[+1]_20 chr9:116104512-116104592 0.00014 51_[+1]_21 chr6:80842842-80842922 0.00014 51_[+1]_21 chr7:66725252-66725332 0.00014 29_[+1]_43 chr15:42868155-42868235 0.00014 52_[+1]_20 chr6:164163154-164163234 0.00014 53_[+1]_19 chr1:159851802-159851882 0.00017 30_[+1]_42 chr10:43230165-43230245 0.00017 31_[+1]_41 chr21:35916380-35916460 0.00017 32_[+1]_40 chr12:57639184-57639264 0.00017 46_[+1]_26 chr16:30437836-30437916 0.00017 32_[+1]_40 chr5:153603056-153603136 0.00017 35_[+1]_37 chr12:127374806-12737488 0.00017 51_[+1]_21 chr6:12861986-12862066 0.00017 51_[+1]_21 chr16:1321949-1322029 0.00017 69_[+1]_3 chr12:121842702-12184278 0.00017 31_[+1]_41 chr10:74655154-74655234 0.00017 31_[+1]_41 chr1:62274748-62274828 0.00017 51_[+1]_21 chr5:138977548-138977628 0.00017 14_[+1]_58 chr2:10367929-10368009 0.00017 33_[+1]_39 chr18:12375590-12375670 0.00017 30_[+1]_42 chr1:155066466-155066546 0.00017 30_[+1]_42 chr12:120529322-12052940 0.00017 30_[+1]_42 chr6:164114331-164114411 0.00017 32_[+1]_40 chr12:110950797-11095087 0.00017 49_[+1]_23 chr6:118981542-118981622 0.0002 55_[+1]_17 chr15:41533575-41533655 0.0002 29_[+1]_43 chr1:181096371-181096451 0.0002 53_[+1]_19 chr14:24895068-24895148 0.0002 33_[+1]_39 chr1:183998448-183998528 0.0002 31_[+1]_41 chr2:20553382-20553462 0.0002 52_[+1]_20 chr1:27442882-27442962 0.0002 47_[+1]_25 chr6:84695588-84695668 0.0002 31_[+1]_41 chr8:87542566-87542646 0.00023 35_[+1]_37 chr3:41074367-41074447 0.00023 32_[+1]_40 chr2:179349545-179349625 0.00023 1_[+1]_71 chr4:129709344-129709424 0.00023 53_[+1]_19 chr6:168212496-168212576 0.00023 38_[+1]_34 chr10:61000481-61000561 0.00023 29_[+1]_43 chr16:70457854-70457934 0.00026 51_[+1]_21 chr1:183014577-183014657 0.00026 32_[+1]_40 chr2:27228964-27229044 0.00026 30_[+1]_42 chr17:40228554-40228634 0.00026 30_[+1]_42 chr2:58269814-58269894 0.00026 33_[+1]_39 chr7:129624446-129624526 0.00026 57_[+1]_15 chr8:38354962-38355042 0.00026 49_[+1]_23 chr2:69690090-69690170 0.00026 30_[+1]_42 chr7:102948412-102948492 0.00026 46_[+1]_26 chr1:212911073-212911153 0.00026 34_[+1]_38 chr17:73154229-73154309 0.00026 54_[+1]_18 chr3:170021678-170021758 0.00026 51_[+1]_21 chr10:14480229-14480309 0.00026 33_[+1]_39 chr5:31978712-31978792 0.00026 53_[+1]_19 chr22:22939485-22939565 0.00026 52_[+1]_20 chr15:34940233-34940313 0.00027 29_[+1]_43 chr22:42356554-42356634 0.00027 52_[+1]_20 chr13:113812408-11381248 0.00027 30_[+1]_42 chr1:173496482-173496562 0.00027 52_[+1]_20 chr10:135173361-13517344 0.00027 35_[+1]_37 chr19:10382331-10382411 0.00029 53_[+1]_19 chr6:110529022-110529102 0.00029 32_[+1]_40 chr4:81018722-81018802 0.00029 44_[+1]_28 chr14:56066226-56066306 0.00029 32_[+1]_40 chr1:182299493-182299573 0.00033 30_[+1]_42 chr12:111137485-11113756 0.00033 35_[+1]_37 chr19:49043023-49043103 0.00033 54_[+1]_18 chr1:235113813-235113893 0.00033 30_[+1]_42 chr11:70040042-70040122 0.00033 32_[+1]_40 chr14:77414058-77414138 0.00033 47_[+1]_25 chr9:98665833-98665913 0.00033 51_[+1]_21 chr3:128102495-128102575 0.00033 51_[+1]_21 chr19:11087745-11087825 0.00039 55_[+1]_17 chr1:204527739-204527819 0.00039 31_[+1]_41 chr20:36509225-36509305 0.00039 33_[+1]_39 chr10:97821157-97821237 0.00039 35_[+1]_37 chr13:49867052-49867132 0.00039 31_[+1]_41 chr15:92012991-92013071 0.00039 53_[+1]_19 chr1:185128089-185128169 0.00039 53_[+1]_19 chr17:58719291-58719371 0.00046 53_[+1]_19 chr3:25861922-25862002 0.00046 30_[+1]_42 chr2:130430975-130431055 0.00046 31_[+1]_41 chr5:32218078-32218158 0.00046 32_[+1]_40 chr1:174932800-174932880 0.00046 33_[+1]_39 chr6:43404429-43404509 0.00046 29_[+1]_43 chr12:69983023-69983103 0.00046 56_[+1]_16 chr2:179730433-179730513 0.00046 32_[+1]_40 chr10:18896615-18896695 0.00046 50_[+1]_22 chr5:53239920-53240000 0.00046 49_[+1]_23 chr7:128119295-128119375 0.00046 29_[+1]_43 chr16:75088262-75088342 0.00046 31_[+1]_41 chr7:127443789-127443869 0.00046 32_[+1]_40 chr17:30660373-30660453 0.00046 48_[+1]_24 chr10:13743750-13743830 0.00046 46_[+1]_26 chr1:223919294-223919374 0.00046 47_[+1]_25 chr5:105176646-105176726 0.00051 34_[+1]_38 chr10:106016584-10601666 0.00051 50_[+1]_22 chr15:80325987-80326067 0.00052 34_[+1]_38 chr3:38199210-38199290 0.00052 54_[+1]_18 chr6:167418985-167419065 0.00052 46_[+1]_26 chr2:219184837-219184917 0.00055 54_[+1]_18 chr18:12539296-12539376 0.00055 54_[+1]_18 chr17:38643118-38643198 0.00055 53_[+1]_19 chr1:89148747-89148827 0.00059 35_[+1]_37 chr8:80872545-80872625 0.00059 53_[+1]_19 chr6:660308-660388 0.00068 20_[+1]_52 chr1:52719237-52719317 0.00068 37_[+1]_35 chr2:58821472-58821552 0.00068 34_[+1]_38 chr16:50357558-50357638 0.00068 32_[+1]_40 chr19:53400206-53400286 0.00068 50_[+1]_22 chr10:126480797-12648087 0.00068 43_[+1]_29 chr2:170504166-170504246 0.00068 46_[+1]_26 chrX:39615085-39615165 0.00068 52_[+1]_20 chr2:58467862-58467942 0.00068 33_[+1]_39 chr3:52265627-52265707 0.00068 54_[+1]_18 chr10:70558415-70558495 0.00068 35_[+1]_37 chr19:7683441-7683521 0.00068 46_[+1]_26 chr5:96264763-96264843 0.00076 53_[+1]_19 chr16:75607178-75607258 0.00076 35_[+1]_37 chr5:131699157-131699237 0.00076 29_[+1]_43 chr1:230281382-230281462 0.00076 29_[+1]_43 chr19:52028080-52028160 0.00079 36_[+1]_36 chr6:90186129-90186209 0.00079 53_[+1]_19 chr19:5955044-5955124 0.00079 51_[+1]_21 chr10:103305795-10330587 0.0008 33_[+1]_39 chr7:2064085-2064165 0.0008 53_[+1]_19 chr17:44820325-44820405 0.0008 30_[+1]_42 chrX:38508620-38508700 0.0008 53_[+1]_19 chr13:67798485-67798565 0.00082 48_[+1]_24 chr6:34158045-34158125 0.00087 33_[+1]_39 chr6:2770606-2770686 0.00087 50_[+1]_22 chr3:13459669-13459749 0.00087 31_[+1]_41 chr11:75187303-75187383 0.00087 53_[+1]_19 chr17:57698475-57698555 0.00096 54_[+1]_18 chr2:175177462-175177542 0.00096 34_[+1]_38 chr1:171724271-171724351 0.001 51_[+1]_21 chr3:71235312-71235392 0.001 37_[+1]_35 chr9:101669200-101669280 0.001 52_[+1]_20 chr6:49574944-49575024 0.001 33_[+1]_39 chr3:48080256-48080336 0.001 53_[+1]_19 chr1:226037817-226037897 0.001 54_[+1]_18 chr6:36056181-36056261 0.0012 36_[+1]_36 chr12:111851038-11185111 0.0012 30_[+1]_42 chr5:145593165-145593245 0.0012 52_[+1]_20 chr3:50648139-50648219 0.0013 31_[+1]_41 chr1:155056652-155056732 0.0013 45_[+1]_27 chr1:111323659-111323739 0.0015 64_[+1]_8 chr1:16576369-16576449 0.0018 25_[+1]_47 chr5:179297717-179297797 0.0029 55_[+1]_17 chr1:213088748-213088828 0.0032 39_[+1]_33 chr18:58756124-58756204 0.0032 22_[+1]_50 chr16:84853266-84853346 0.0032 30_[+1]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCCARVW width=8 seqs=249 chr7:77793962-77794042 ( 4) TGCCAAGA 1 chr3:159819938-159820018 ( 37) TGCCAAGA 1 chr11:110350668-11035074 ( 52) TGCCAAGA 1 chr6:111752341-111752421 ( 38) TGCCAAGA 1 chr6:118823480-118823560 ( 33) TGCCAAGA 1 chr1:6656556-6656636 ( 51) TGCCAAGA 1 chr6:44073013-44073093 ( 34) TGCCAAGA 1 chr1:55202065-55202145 ( 54) TGCCAAGA 1 chr15:64854342-64854422 ( 52) TGCCAAGA 1 chr8:61664332-61664412 ( 52) TGCCAAGA 1 chr8:60576766-60576846 ( 54) TGCCAAGA 1 chr17:36375498-36375578 ( 28) TGCCAAGA 1 chr9:90431106-90431186 ( 52) TGCCAAGA 1 chr1:46341826-46341906 ( 31) TGCCAAGA 1 chr19:58153936-58154016 ( 52) TGCCAAGA 1 chr6:86310605-86310685 ( 54) TGCCAAGA 1 chr11:59609954-59610034 ( 50) TGCCAAGA 1 chr2:57985980-57986060 ( 36) TGCCAAGA 1 chr15:20398852-20398932 ( 33) TGCCAAGA 1 chr1:166664521-166664601 ( 34) TGCCAAGT 1 chr21:39251391-39251471 ( 32) TGCCAAGT 1 chr5:41747504-41747584 ( 41) TGCCAAGT 1 chr2:68815850-68815930 ( 55) TGCCAAGT 1 chr1:52968621-52968701 ( 54) TGCCAAGT 1 chr4:84160140-84160220 ( 52) TGCCAAGT 1 chr2:219187503-219187583 ( 30) TGCCAAGT 1 chr12:66018483-66018563 ( 33) TGCCAAGT 1 chr11:123105930-12310601 ( 48) TGCCAAGT 1 chr10:49592780-49592860 ( 45) TGCCAAGT 1 chr2:109249996-109250076 ( 36) TGCCAAGT 1 chr17:45646405-45646485 ( 33) TGCCAAGT 1 chr5:109390096-109390176 ( 53) TGCCAACA 1 chr2:33050442-33050522 ( 51) TGCCAACA 1 chr11:111667898-11166797 ( 31) TGCCAACA 1 chr1:153853643-153853723 ( 30) TGCCAACA 1 chr3:43746360-43746440 ( 49) TGCCAACA 1 chr10:127457006-12745708 ( 52) TGCCAACA 1 chr6:67831204-67831284 ( 54) TGCCAACA 1 chr20:39099099-39099179 ( 46) TGCCAACA 1 chr3:182251341-182251421 ( 51) TGCCAACA 1 chr4:124533105-124533185 ( 53) TGCCAACT 1 chr18:43336128-43336208 ( 35) TGCCAGGA 1 chr8:97287686-97287766 ( 33) TGCCAACT 1 chrX:44806132-44806212 ( 47) TGCCAACT 1 chr11:72125376-72125456 ( 50) TGCCAGGA 1 chr17:18768470-18768550 ( 34) TGCCAAAA 1 chr21:27089996-27090076 ( 45) TGCCAACT 1 chr19:7764425-7764505 ( 31) TGCCAGGA 1 chr16:15886630-15886710 ( 33) TGCCAACT 1 chr15:63729155-63729235 ( 44) TGCCAACT 1 chr1:168248646-168248726 ( 51) TGCCAACT 1 chr5:16406899-16406979 ( 37) TGCCAACT 1 chr7:128163458-128163538 ( 50) TGCCAGGA 1 chr7:32977401-32977481 ( 34) TGCCAGGA 1 chr5:42621051-42621131 ( 53) TGCCAAAA 1 chr12:65721019-65721099 ( 40) TGCCAGGA 1 chr9:130742057-130742137 ( 48) TGCCAACT 1 chr4:24078593-24078673 ( 66) TGCCAAAA 1 chr9:101267326-101267406 ( 33) TGCCAAAA 1 chr3:99587335-99587415 ( 36) TGCCAACT 1 chr22:32263078-32263158 ( 36) TGCCAGGA 1 chr4:155360535-155360615 ( 38) TGCCAAAA 1 chr1:61546936-61547016 ( 63) TGCCAAAA 1 chr20:32026428-32026508 ( 33) TGCCAACT 1 chr12:4681029-4681109 ( 30) TGCCAACT 1 chr11:50017301-50017381 ( 52) TGCCAAAA 1 chr1:11717887-11717967 ( 33) TGCCAAAA 1 chr15:59048298-59048378 ( 51) TGCCAAAA 1 chr5:81032036-81032116 ( 53) TGCCAAAA 1 chr12:56544496-56544576 ( 51) TGCCAAAA 1 chr5:139129014-139129094 ( 51) TGCCAAAA 1 chr17:73507962-73508042 ( 47) TGCCAAAA 1 chr8:42534724-42534804 ( 33) TGCCAACT 1 chr20:44884243-44884323 ( 46) TGCCAACT 1 chr3:142889716-142889796 ( 52) TGCCAAAA 1 chr6:74102069-74102149 ( 34) TGCCAACT 1 chr22:28307482-28307562 ( 34) TGCCAACT 1 chr6:84769033-84769113 ( 50) TGCCAGGA 1 chr17:60548216-60548296 ( 50) TGCCAGGA 1 chr4:17546514-17546594 ( 33) TGCCAGGT 1 chr22:23337501-23337581 ( 53) TGCCAAAT 1 chr1:91023411-91023491 ( 30) TGCCAAAT 1 chr1:67907041-67907121 ( 60) TGCCAAAT 1 chr10:89346129-89346209 ( 53) TGCCAAAT 1 chr16:23530106-23530186 ( 55) TGCCAGGT 1 chr5:133802625-133802705 ( 52) TGCCAAAT 1 chr6:34384042-34384122 ( 31) TGCCAGGT 1 chr12:74502666-74502746 ( 34) TGCCAAAT 1 chr9:37349065-37349145 ( 53) TGCCAAAT 1 chr12:104781130-10478121 ( 51) TGCCAAAT 1 chr2:120278731-120278811 ( 33) TGCCAAAT 1 chr2:189314866-189314946 ( 47) TGCCAGGT 1 chr1:36794418-36794498 ( 31) TGCCAAAT 1 chr6:27360560-27360640 ( 52) TGCCAAAT 1 chr7:111842955-111843035 ( 33) TGCCAGGT 1 chr1:47935202-47935282 ( 34) TGCCAGGT 1 chr1:185690837-185690917 ( 51) TGCCAAAT 1 chr17:36910114-36910194 ( 31) TGCCAAAT 1 chr1:206629271-206629351 ( 53) TGCCAGCA 1 chr9:116104512-116104592 ( 52) TGCCAGCA 1 chr6:80842842-80842922 ( 52) TGCCAGCA 1 chr7:66725252-66725332 ( 30) TGCCAGCA 1 chr15:42868155-42868235 ( 53) TGCCAGCA 1 chr6:164163154-164163234 ( 54) TGCCAGCA 1 chr1:159851802-159851882 ( 31) TGCCAGCT 1 chr10:43230165-43230245 ( 32) TGCCAGCT 1 chr21:35916380-35916460 ( 33) TGCCAGAA 1 chr12:57639184-57639264 ( 47) TGCCAGCT 1 chr16:30437836-30437916 ( 33) TGCCAGCT 1 chr5:153603056-153603136 ( 36) TGCCAGAA 1 chr12:127374806-12737488 ( 52) TGCCAGAA 1 chr6:12861986-12862066 ( 52) TGCCAGAA 1 chr16:1321949-1322029 ( 70) TGCCAGCT 1 chr12:121842702-12184278 ( 32) TGCCAGAA 1 chr10:74655154-74655234 ( 32) TGCCAGAA 1 chr1:62274748-62274828 ( 52) TGCCAGAA 1 chr5:138977548-138977628 ( 15) TGCCAGCT 1 chr2:10367929-10368009 ( 34) TGCCAGCT 1 chr18:12375590-12375670 ( 31) TGCCAGCT 1 chr1:155066466-155066546 ( 31) TGCCAGCT 1 chr12:120529322-12052940 ( 31) TGCCAGCT 1 chr6:164114331-164114411 ( 33) TGCCAGCT 1 chr12:110950797-11095087 ( 50) TGCCAGCT 1 chr6:118981542-118981622 ( 56) TGCCAGAT 1 chr15:41533575-41533655 ( 30) TGCCAAGC 1 chr1:181096371-181096451 ( 54) TGCCAAGC 1 chr14:24895068-24895148 ( 34) TGCCAGAT 1 chr1:183998448-183998528 ( 32) TGCCAAGC 1 chr2:20553382-20553462 ( 53) TGCCAGAT 1 chr1:27442882-27442962 ( 48) TGCCAAGC 1 chr6:84695588-84695668 ( 32) TGCCAAGC 1 chr8:87542566-87542646 ( 36) TGCCAAGG 1 chr3:41074367-41074447 ( 33) TGCCAAGG 1 chr2:179349545-179349625 ( 2) TGCCAAGG 1 chr4:129709344-129709424 ( 54) TGCCAAGG 1 chr6:168212496-168212576 ( 39) TGCCAAGG 1 chr10:61000481-61000561 ( 30) TGCCAATA 1 chr16:70457854-70457934 ( 52) AGCCAAGA 1 chr1:183014577-183014657 ( 33) TGCCAATT 1 chr2:27228964-27229044 ( 31) AGCCAAGA 1 chr17:40228554-40228634 ( 31) AGCCAAGA 1 chr2:58269814-58269894 ( 34) AGCCAAGA 1 chr7:129624446-129624526 ( 58) TGCCAATT 1 chr8:38354962-38355042 ( 50) AGCCAAGA 1 chr2:69690090-69690170 ( 31) TGCCAATT 1 chr7:102948412-102948492 ( 47) TGCCAATT 1 chr1:212911073-212911153 ( 35) TGCCAATT 1 chr17:73154229-73154309 ( 55) AGCCAAGA 1 chr3:170021678-170021758 ( 52) AGCCAAGA 1 chr10:14480229-14480309 ( 34) AGCCAAGA 1 chr5:31978712-31978792 ( 54) AGCCAAGA 1 chr22:22939485-22939565 ( 53) AGCCAAGA 1 chr15:34940233-34940313 ( 30) AGCCAAGT 1 chr22:42356554-42356634 ( 53) AGCCAAGT 1 chr13:113812408-11381248 ( 31) AGCCAAGT 1 chr1:173496482-173496562 ( 53) AGCCAAGT 1 chr10:135173361-13517344 ( 36) AGCCAAGT 1 chr19:10382331-10382411 ( 54) TGCCAACC 1 chr6:110529022-110529102 ( 33) TGCCAACC 1 chr4:81018722-81018802 ( 45) TGCCAACC 1 chr14:56066226-56066306 ( 33) TGCCAACC 1 chr1:182299493-182299573 ( 31) TGCCAGGC 1 chr12:111137485-11113756 ( 36) TGCCAGGC 1 chr19:49043023-49043103 ( 55) TGCCAGGC 1 chr1:235113813-235113893 ( 31) TGCCAGGC 1 chr11:70040042-70040122 ( 33) TGCCAGGC 1 chr14:77414058-77414138 ( 48) TGCCAGGC 1 chr9:98665833-98665913 ( 52) TGCCAAAC 1 chr3:128102495-128102575 ( 52) TGCCAGGC 1 chr19:11087745-11087825 ( 56) TGCCAGGG 1 chr1:204527739-204527819 ( 32) TGCCAAAG 1 chr20:36509225-36509305 ( 34) TGCCAGGG 1 chr10:97821157-97821237 ( 36) TGCCAGGG 1 chr13:49867052-49867132 ( 32) TGCCAGGG 1 chr15:92012991-92013071 ( 54) TGCCAGGG 1 chr1:185128089-185128169 ( 54) TGCCAGTA 1 chr17:58719291-58719371 ( 54) TGCCAGTT 1 chr3:25861922-25862002 ( 31) TGCCAGTT 1 chr2:130430975-130431055 ( 32) AGCCAAAA 1 chr5:32218078-32218158 ( 33) AGCCAAAA 1 chr1:174932800-174932880 ( 34) TGCCAGTT 1 chr6:43404429-43404509 ( 30) AGCCAACT 1 chr12:69983023-69983103 ( 57) TGCCAGTT 1 chr2:179730433-179730513 ( 33) TGCCAGTT 1 chr10:18896615-18896695 ( 51) GGCCAAGA 1 chr5:53239920-53240000 ( 50) AGCCAAAA 1 chr7:128119295-128119375 ( 30) AGCCAAAA 1 chr16:75088262-75088342 ( 32) TGCCAGTT 1 chr7:127443789-127443869 ( 33) AGCCAAAA 1 chr17:30660373-30660453 ( 49) AGCCAACT 1 chr10:13743750-13743830 ( 47) GGCCAAGA 1 chr1:223919294-223919374 ( 48) AGCCAGGA 1 chr5:105176646-105176726 ( 35) AGCCAAAT 1 chr10:106016584-10601666 ( 51) AGCCAAAT 1 chr15:80325987-80326067 ( 35) TGCCAGCC 1 chr3:38199210-38199290 ( 55) TGCCAGCC 1 chr6:167418985-167419065 ( 47) TGCCAGCC 1 chr2:219184837-219184917 ( 55) TGCCAGAC 1 chr18:12539296-12539376 ( 55) TGCCAGCG 1 chr17:38643118-38643198 ( 54) TGCCAGAC 1 chr1:89148747-89148827 ( 36) GGCCAACA 1 chr8:80872545-80872625 ( 54) TGCCAGAG 1 chr6:660308-660388 ( 21) GGCCAACT 1 chr1:52719237-52719317 ( 38) AGCCAGAA 1 chr2:58821472-58821552 ( 35) AGCCAGCT 1 chr16:50357558-50357638 ( 33) GGCCAAAA 1 chr19:53400206-53400286 ( 51) GGCCAAAA 1 chr10:126480797-12648087 ( 44) GGCCAACT 1 chr2:170504166-170504246 ( 47) GGCCAAAA 1 chrX:39615085-39615165 ( 53) AGCCAGCT 1 chr2:58467862-58467942 ( 34) GGCCAAAA 1 chr3:52265627-52265707 ( 55) GGCCAGGA 1 chr10:70558415-70558495 ( 36) GGCCAGGA 1 chr19:7683441-7683521 ( 47) GGCCAACT 1 chr5:96264763-96264843 ( 54) TGCCAATG 1 chr16:75607178-75607258 ( 36) GGCCAAAT 1 chr5:131699157-131699237 ( 30) TGCCAATG 1 chr1:230281382-230281462 ( 30) TGCCAATG 1 chr19:52028080-52028160 ( 37) AGCCAAGG 1 chr6:90186129-90186209 ( 54) AGCCAATA 1 chr19:5955044-5955124 ( 52) AGCCAATA 1 chr10:103305795-10330587 ( 34) AGCCAATT 1 chr7:2064085-2064165 ( 54) AGCCAATT 1 chr17:44820325-44820405 ( 31) AGCCAATT 1 chrX:38508620-38508700 ( 54) AGCCAATT 1 chr13:67798485-67798565 ( 49) GGCCAGCA 1 chr6:34158045-34158125 ( 34) TGCCAGTC 1 chr6:2770606-2770686 ( 51) GGCCAGAA 1 chr3:13459669-13459749 ( 32) GGCCAGAA 1 chr11:75187303-75187383 ( 54) TGCCAGTC 1 chr17:57698475-57698555 ( 55) TGCCAGTG 1 chr2:175177462-175177542 ( 35) AGCCAAAC 1 chr1:171724271-171724351 ( 52) GGCCAAGG 1 chr3:71235312-71235392 ( 38) GGCCAAGG 1 chr9:101669200-101669280 ( 53) GGCCAAGG 1 chr6:49574944-49575024 ( 34) AGCCAAAG 1 chr3:48080256-48080336 ( 54) GGCCAAGG 1 chr1:226037817-226037897 ( 55) AGCCAGGG 1 chr6:36056181-36056261 ( 37) GGCCAGGC 1 chr12:111851038-11185111 ( 31) TGCCATGA 1 chr5:145593165-145593245 ( 53) GGCCAAAG 1 chr3:50648139-50648219 ( 32) GGCCAGTT 1 chr1:155056652-155056732 ( 46) TGCCATGT 1 chr1:111323659-111323739 ( 65) TTCCAAGA 1 chr1:16576369-16576449 ( 26) TGGCAACT 1 chr5:179297717-179297797 ( 56) TGGCAGGG 1 chr1:213088748-213088828 ( 40) AGCCATTT 1 chr18:58756124-58756204 ( 23) ATCCAAAT 1 chr16:84853266-84853346 ( 31) CGCCAGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.8937 E= 5.9e-270 -68 -592 -140 153 -1460 -1460 203 -500 -1460 203 -492 -1460 -1460 204 -1460 -1460 196 -1460 -1460 -1460 132 -1460 51 -441 -7 1 72 -125 63 -116 -122 60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 249 E= 5.9e-270 0.160643 0.004016 0.092369 0.742972 0.000000 0.000000 0.991968 0.008032 0.000000 0.991968 0.008032 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.642570 0.000000 0.345382 0.012048 0.244980 0.244980 0.401606 0.108434 0.397590 0.108434 0.104418 0.389558 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCCARVW MEME-1 regular expression -------------------------------------------------------------------------------- TGCCA[AG][GAC][AT] -------------------------------------------------------------------------------- Time 4.74 secs. ******************************************************************************** ******************************************************************************** MOTIF WYYTGGCA MEME-2 width = 8 sites = 250 llr = 1717 E-value = 1.2e-253 ******************************************************************************** -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 41:::::7 pos.-specific C 144:::a1 probability G 12::aa:: matrix T 436a:::2 bits 2.0 ** 1.8 **** 1.6 **** 1.4 **** Relative 1.2 **** Entropy 1.0 ***** (9.9 bits) 0.8 ***** 0.6 ****** 0.4 ****** 0.2 ******** 0.0 -------- Multilevel TCTTGGCA consensus ATC T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:11087745-11087825 23 3.04e-05 agaaCAAAAT TCTTGGCA GCCGGCCAAA chr16:50357558-50357638 22 3.04e-05 ATACGGATAA TCTTGGCA CGTGGCCAAA chr21:35916380-35916460 22 3.04e-05 tagctgcctt acttggca acttgccaga chr11:110350668-11035074 41 3.04e-05 ACTCAGTCTG ACTTGGCA TTGTGCCAAG chr3:50648139-50648219 21 3.04e-05 ACCCTCCCTC ACTTGGCA CCAGGCCAGT chr12:65721019-65721099 29 3.04e-05 ACCATGAGGG ACTTGGCA CTATGCCAGG chr14:24895068-24895148 23 3.04e-05 TATCTTTCAT TCTTGGCA CAGTGCCAGA chr9:116104512-116104592 41 3.04e-05 gctcccatcc tcttggca cactgccagc chr9:37349065-37349145 42 3.04e-05 CGAACACAGT ACTTGGCA CAATGCCAAA chr11:57019373-57019453 40 3.04e-05 atttcactgg acttggca cggtgcccat chr19:49043023-49043103 44 3.04e-05 tgtgcagatc tcttggca ctgtgccagg chr6:110529022-110529102 22 3.04e-05 TACTTTGAGT ACTTGGCA CCATGCCAAC chr17:30660373-30660453 38 3.04e-05 TTCATGTGGC ACTTGGCA CACAGCCAAC chr17:36375498-36375578 17 3.04e-05 AACATTTGAG ACTTGGCA ACTTGCCAAG chr2:58467862-58467942 23 3.04e-05 GGTACATACG ACTTGGCA AAGGGCCAAA chr6:86310605-86310685 43 3.04e-05 TGATGAGATA ACTTGGCA AATTGCCAAG chr10:13743750-13743830 36 3.04e-05 TCGATCCTGG ACTTGGCA CTGGGCCAAG chr6:67831204-67831284 43 3.04e-05 TGTCAGAGCC ACTTGGCA AAATGCCAAC chr12:56544496-56544576 40 3.04e-05 AACCACTCAT ACTTGGCA AAATGCCAAA chr3:128102495-128102575 20 3.04e-05 ATCAGCCAGC ACTTGGCA GGCACCACCC chr12:111851038-11185111 20 3.04e-05 cctgatatga tcttggca tggtgccatg chr10:70558415-70558495 25 3.04e-05 TCAGCAGACA ACTTGGCA AGAGGCCAGG chr17:45646405-45646485 22 3.04e-05 AACACTGAAA TCTTGGCA AGTTGCCAAG chr1:52719237-52719317 27 6.26e-05 AGAACCTGAG TTTTGGCA AGCAGCCAGA chr5:109390096-109390176 42 6.26e-05 CCTCCTGATG TTTTGGCA TCTTGCCAAC chr7:77793962-77794042 24 6.26e-05 ACCTCCCCTT TTTTGGCA TTAGGCCAAG chr8:87542566-87542646 25 6.26e-05 tagagacagg ttttggca tgttgccaag chr10:89346129-89346209 42 6.26e-05 tccctaggta atttggca gcctgccaaa chr12:69983023-69983103 46 6.26e-05 CCTCTTTTTT TTTTGGCA ttttgccagt chr2:179730433-179730513 22 6.26e-05 TCAAACAGCT TTTTGGCA ATGTGCCAGT chr1:173496482-173496562 42 6.26e-05 ATAGCGCCTC ATTTGGCA GTGAGCCAAG chr2:170504166-170504246 36 6.26e-05 CAACAAACTA TTTTGGCA CCTGGCCAaa chr7:127443789-127443869 22 6.26e-05 AGACTCCCAA TTTTGGCA ACCAGCCAAA chr4:155360535-155360615 27 6.26e-05 cactcttaat ttttggca atttgCCAAA chr12:66018483-66018563 22 6.26e-05 AATTTTCACT TTTTGGCA CTTTGCCAAG chr9:90431106-90431186 41 6.26e-05 gccaactgat ttttggca aagtgccaag chr1:11717887-11717967 22 6.26e-05 tcctaaaaca tttTGGCA CTTTGCCAAA chr10:127457006-12745708 41 6.26e-05 AATCCTGGAT ATTTGGCA TCTTGCCAAC chr15:92012991-92013071 43 6.26e-05 ATTAGCAGTC ATTTggca gagtgccagg chr6:84695588-84695668 21 6.26e-05 TTCTTTTAGC ATTTGGCA CTTTGCCAAG chr9:98665833-98665913 41 6.26e-05 GAATATCAAG TTTTGGCA TAATGCCAAA chr1:226037817-226037897 44 6.26e-05 GGGGCGGCTA TTTTGGCA AGGAGCCAGG chr15:20398852-20398932 22 6.26e-05 TTTTTCATAC TTTTGGCA GCTTGCCAAG chr6:660308-660388 10 9.14e-05 agcaccacc tcctggca aaaggccaac chr1:181096371-181096451 43 9.14e-05 cctatggagc acctggca ctgtgccaag chr6:2770606-2770686 40 9.14e-05 CCAGAGAGTC TCCTGGCA GGGGGCCAGA chr5:96264763-96264843 43 9.14e-05 gacacagaaa tcctggca ccatgccaat chr6:43404429-43404509 19 9.14e-05 AATGGGGCAT TCCTGGCA ATAAGCCAAC chr1:89148747-89148827 25 9.14e-05 AGACGTTAAG TCCTGGCA TCAGGCCAAC chr1:52968621-52968701 43 9.14e-05 cccactatgg acctggca ccgtgccaag chr12:121842702-12184278 21 9.14e-05 CATTTGAAAA TCCTGGCA CTGTGCCAGA chr1:36794418-36794498 20 9.14e-05 cctttctggc acctggca ctctgccaaa chr1:213088748-213088828 18 9.14e-05 CTAGACCCTC ACCTGGCA CTGTGCCTGG chr3:52265627-52265707 33 9.14e-05 GCGCTGGCAC ACCTGGCA GAGGGCCAGC chr2:219184837-219184917 44 9.14e-05 tgtaatatgt acctggca ctatgccaga chr1:27442882-27442962 37 9.14e-05 AGGCCCAGAA TCCTGGCA CAGTGCCAAG chr12:120529322-12052940 20 9.14e-05 GTTGGCAAAT ACCTGGCA CAGTGCCAGC chr3:182251341-182251421 40 9.14e-05 ttagtacagt tcctggca cactgccaac chr6:164163154-164163234 43 9.14e-05 CGCGCCCGAG TCCTGGCA GCATGCCAGC chr17:38643118-38643198 43 9.14e-05 tgtcctcact acctggca tagtgccaga chr18:43336128-43336208 24 1.22e-04 CGCAGAGAAA AGTTGGCA CAGTGCCAGG chr6:118981542-118981622 45 1.22e-04 GAGCTGGGGG AGTTGGCA GATTGCCAGA chr2:175177462-175177542 24 1.22e-04 aataaagttt tgttggca cacagccaaa chr2:58269814-58269894 23 1.22e-04 CATACCTACA AGTTGGCA TACAGCCAAG chr8:38354962-38355042 39 1.22e-04 caggagggtg agttggca gtgagccaag chr6:44073013-44073093 23 1.22e-04 TGTCGCAAGA AGTTGGCA GCATGCCAAG chr6:80842842-80842922 41 1.22e-04 AGAACATCCC TGTTGGCA TTGTGCCAGC chr8:61664332-61664412 41 1.22e-04 GAGAACTTGA AGTTGGCA AAATGCCAAG chr19:58153936-58154016 41 1.22e-04 ATATGAGTGT TGTTGGCA GCTTGCCAAG chr1:62274748-62274828 41 1.22e-04 GCTTTATTTC TGTTGGCA AGGTGCCAGA chr3:38199210-38199290 44 1.22e-04 GAGCTCATCT AGTTGGCA TGGTGCCAGC chr6:36056181-36056261 26 1.22e-04 cccattaaaa agttggca aagggccagg chr20:39099099-39099179 35 1.22e-04 ACATGTGAGT AGTTGGCA CAGTGCCAAC chr3:170021678-170021758 41 1.22e-04 caggagatgg agttggca gtgagccaag chr1:185128089-185128169 43 1.22e-04 tggttctggt tgttggca agatgccagt chr5:31978712-31978792 43 1.22e-04 cgggaggcgg agttggca gtgagccaag chrX:44806132-44806212 36 1.67e-04 gactcatggt atctggca caatgccaac chr10:103305795-10330587 23 1.67e-04 taatggacag atctggca ggcagccaat chr15:80325987-80326067 24 1.67e-04 TGCCTCTCTA ATCTGGCA CCCTGCCAGC chr2:130430975-130431055 21 1.67e-04 CGCTGGTCCC ATCTGGCA CTGAGCCAAA chr17:57698475-57698555 44 1.67e-04 ACATATTGTT ATCTGGCA ACATGCCAGT chr1:166664521-166664601 23 1.67e-04 TGCTGGTAAA ATCTGGCA GTCTGCCAAG chr5:16406899-16406979 26 1.67e-04 ATGGCTGAAA ATCTGGCA CTATGCCAAC chr16:23530106-23530186 44 1.67e-04 cttactatgt atctggca acgtgccagg chr10:126480797-12648087 33 1.67e-04 TTATTTGGCT CCTTGGCA AGAGGCCAAC chr12:74502666-74502746 23 1.67e-04 GTGCTAAAAT TTCTGGCA CTGTGCCAAA chr10:97821157-97821237 25 1.67e-04 TTGTCACTTG TTCTGGCA CAGTGCCAGG chr2:68815850-68815930 44 1.67e-04 TAACATGAAA TTCTGGCA TTTTGCCAAG chr6:12861986-12862066 4 1.67e-04 CAT TTCTGGCA AGAAGTACAC chr2:189314866-189314946 36 1.67e-04 TGTGCTATAT TTCTGGCA CTGTGCCAGG chr2:69690090-69690170 20 1.67e-04 GAAAACCAAA CCTTGGCA CAGTGCCAAT chr15:59048298-59048378 40 1.67e-04 ACCAGCTCAA CCTTGGCA CAGTGCCAAA chr11:59609954-59610034 39 1.67e-04 CTCAGAGTTC TTCTGGCA CAGTGCCAAG chr7:111842955-111843035 22 1.67e-04 AGCACCTCAG TTCTGGCA GCTTGCCAGG chr14:77414058-77414138 37 1.67e-04 TTTGTCAAAG CCTTGGCA GAATGCCAGG chr1:47935202-47935282 23 1.67e-04 CTTAGTCTGT TTCTGGCA CTTTGCCAGG chr4:129709344-129709424 43 1.67e-04 CCCTCCTGAT CCTTGGCA TTGTGCCAAG chr1:230281382-230281462 19 1.67e-04 AAGCCACCCA CCTTGGCA TAGTGCCAAT chr1:182299493-182299573 20 2.11e-04 tgttgtaagt gcttggca tggtgccagg chr4:124533105-124533185 42 2.11e-04 agtggcgtga tcttggct cactgccaac chr16:15886630-15886710 22 2.11e-04 agtggtgcag tcttggct cagtgccaac chr1:168248646-168248726 40 2.11e-04 taattcttct gcttggca ctctgccaac chr19:10382331-10382411 43 2.11e-04 TGGTTTGGGA ACTTGGCT CTGTGCCAAC chr12:57639184-57639264 36 2.11e-04 agtggcgcaa tcttggct cagtgccagc chr17:44820325-44820405 20 2.11e-04 AGCTTCTTAC TCTTGGCT CTGAGCCAAT chr16:30437836-30437916 22 2.11e-04 aatggcgtga tcttggct cactgccagc chr12:127374806-12737488 41 2.11e-04 TATGTCCAGA ACTTGGCT CTTTGCCAGA chr1:55202065-55202145 43 2.11e-04 ggtagggaga tcttggct cactgccaag chr22:32263078-32263158 25 2.11e-04 ATCTCCCTTT ACTTGGCT CTTTGCCAGG chr1:235113813-235113893 20 2.11e-04 CCTGGCAGAA GCTTGGCA CTGTGCCAGG chr10:135173361-13517344 25 2.11e-04 CTGGGCCCTT TCTTGGCT TCCAGCCAAG chr8:42534724-42534804 22 2.11e-04 cgtggtgcaa tcttggct cactgccaac chr5:138977548-138977628 4 2.11e-04 tga tcttggct cactgccagc chr2:10367929-10368009 23 2.11e-04 gtgcacgaaa tcttggct cactgccagc chr18:12375590-12375670 20 2.11e-04 agtggcccgc tcttggct cactgccagc chr20:44884243-44884323 22 2.11e-04 CCCTCAGGCA TCTTGGCT AGGTGCCCTG chr10:14480229-14480309 23 2.11e-04 ccagcctcat gcttggca atgagccaag chr6:164114331-164114411 22 2.11e-04 agtggcgcga tcttggct cactgccagc chr6:74102069-74102149 23 2.11e-04 aatggcgcaa tcttggct cactgccaac chr14:56066226-56066306 22 2.11e-04 agtggcgcaa tcttggct cactgccaac chr16:84853266-84853346 20 2.11e-04 TGtgggaagc gcttggca ccgcgccagg chr12:110950797-11095087 39 2.11e-04 agtggcgcga tcttggct cattgccagc chr3:71235312-71235392 21 2.59e-04 TGTTAATTTT CTTTGGCA TGGAGCCAGG chr3:25861922-25862002 20 2.59e-04 aagtcatctg aattggca acctgccagt chr1:204527739-204527819 21 2.59e-04 aggttCTGTT CTTTGGCA GGATGCCAAA chr3:41074367-41074447 22 2.59e-04 CTGGCTTTAT AATTGGCA GGGTGCCAAG chr13:113812408-11381248 20 2.59e-04 aataaagctt tattggca cacagccaag chr1:183014577-183014657 22 2.59e-04 tatatgtggt aattggca acttgccaat chr5:105176646-105176726 24 2.59e-04 gagccgagta aattggca agcagccaaa chr2:179349545-179349625 33 2.59e-04 TTGTCGTCAG CTTTGGCA TGGAGCCAAG chr2:120278731-120278811 22 2.59e-04 AAGGTTAACA AATTGGCA GTTTGCCAAA chr7:102948412-102948492 36 2.59e-04 TGTGCTTTTT CTTTGGCA CTATGCCAAT chr10:106016584-10601666 40 2.59e-04 GTTGATAATT CTTTGGCA AGGAGCCAAA chr1:185690837-185690917 40 2.59e-04 AGTTTGAATT AATTGGCA TTATGCCAAA chr1:171724271-171724351 41 2.88e-04 TGGCTTACAC TGCTGGCA TTAGGCCAAG chr16:70457854-70457934 41 2.88e-04 cgggaggcag agctggca gtgagccaag chr2:27228964-27229044 20 2.88e-04 cgggaggcgt agctggca ctgagccaag chr17:40228554-40228634 20 2.88e-04 cggggggcgg agctggca gtgagccaag chr20:36509225-36509305 23 2.88e-04 GGACAGGCCC AGCTGGCA ACATGCCAGG chr7:128119295-128119375 19 2.88e-04 GAATTCCCTG AGCTGGCA CCTAGCCAAA chr12:104781130-10478121 40 2.88e-04 CTTCCTGGGT AGCTGGCA AACTGCCAAA chr8:60576766-60576846 43 2.88e-04 taacgttaaa tgctggca aggtgccaag chr17:73154229-73154309 44 2.88e-04 cgggaggcgg agctggca gtgagccaag chr6:90186129-90186209 43 2.88e-04 cctcccaaag tgctggCA CCCAGCCAAT chr11:75187303-75187383 43 2.88e-04 GGCTAGTCAT AGCTggca ctgtgccagt chr22:22939485-22939565 42 2.88e-04 cgggaggcgg agctggca gcgagccaag chr4:17546514-17546594 22 3.49e-04 attactatgt gtttggca caatgccagg chr22:23337501-23337581 42 3.49e-04 ttgttcagat ttttggct gactgccaaa chr8:97287686-97287766 22 3.49e-04 TCAAACAGCT TTTTGGCT ATTTGCCAAC chr1:153853643-153853723 19 3.49e-04 GCTTTGCAGC CCCTGGCA TGATGCCAAC chr5:153603056-153603136 25 3.49e-04 gaacatttat ttttggct ctgtgccaga chr9:130742057-130742137 22 3.49e-04 ACCCCCAGGT ATTTGGCT GGCGGCTGCC chr3:43746360-43746440 38 3.49e-04 GCCTGTCTAA ATTTGGCT GGTTGCCAAC chr9:101669200-101669280 42 3.49e-04 CCTCTGAACA CCCTGGCA AAGGGCCAAG chr4:24078593-24078673 37 3.49e-04 tccctccttt ttttggct caatgccaaa chr16:75088262-75088342 21 3.49e-04 CACTTTGCCT CCCTGGCA CCCTGCCAGT chr3:99587335-99587415 25 3.49e-04 GCTGCTATAG GTTTGGCA CTGTGCCAAC chr15:64854342-64854422 41 3.49e-04 CTATTTCTCA GTTTGGCA TAGTGCCAAG chrX:39615085-39615165 42 3.49e-04 TCAGGCCCAG CCCTGGCA CCCAGCCAGC chr10:74655154-74655234 21 3.49e-04 CAAGGATGAT ATTTGGCT CAATGCCAGA chr18:58756124-58756204 12 3.49e-04 ACATTCTCAG TTTTGGCT TAGATCCAAA chr16:75607178-75607258 25 3.49e-04 GCCCAGCTCA TTTTGGCT GCAGGCCAAA chr5:131699157-131699237 3 3.49e-04 ca atttggct tccataaaaa chr7:66725252-66725332 19 3.49e-04 agcaagaagg ccctggca aaatgccagc chr5:145593165-145593245 42 3.49e-04 CAGTAGTGTT TTTTGGCT TGGGGCCAAA chrX:38508620-38508700 43 3.49e-04 AGTATGGTGA GTTTGGCA ACAAGCCAAT chr19:7683441-7683521 36 3.49e-04 CCTAACCAGC GTTTGGCA TGGGGCCAAC chr11:72125376-72125456 39 4.05e-04 ACAGCAGGCC TCCTGGCT GGCTGCCAGG chr15:41533575-41533655 19 4.05e-04 cttgccatgt gcctggca ctttgccaag chr19:7764425-7764505 20 4.05e-04 TGCCACTCCT TCCTGGCT CTGTGCCAGG chr5:42621051-42621131 17 4.05e-04 AGTCATATGT TCCTGGCT GGCCTACCTA chr2:219187503-219187583 19 4.05e-04 cctcctcaga gcctggca gagtgccaag chr8:80872545-80872625 43 4.05e-04 TTTCTACTAA TCCTGGCT CTGTGCCAGA chr11:123105930-12310601 37 4.05e-04 TGCGATCTGG GCCTGGCA GCGTGCCAAG chr1:223919294-223919374 37 4.05e-04 CTGAGTACAG GCCTGGCA CGGAGCCAGG chr15:34940233-34940313 19 4.79e-04 CCTGCAGTTC CTCTggca ggcagccaag chr1:91023411-91023491 19 4.79e-04 GCCTAACAGT CTCTGGCA CAGTGCCAAA chr2:33050442-33050522 40 4.79e-04 CTTCGCCATC TCTTGGCC CTGTGCCAAC chr3:13459669-13459749 21 4.79e-04 CAAGTTCAGC CTCTGGCA TCAGGCCAGA chr1:111323659-111323739 54 4.79e-04 GACCACGTCT TCTTGGCC TGGTTCCAAG chr1:61546936-61547016 20 4.79e-04 AAAGCAGGCT TACTGGCA ACTTGCCAAA chr2:20553382-20553462 42 4.79e-04 aaatgcagaa tcttggcc ccatgccaga chr11:70040042-70040122 22 4.79e-04 CAGAAGGAAG TActggca cagtgccagg chr6:27360560-27360640 41 4.79e-04 aggatttatt acttggcc ttgtgccaaa chr2:57985980-57986060 25 4.79e-04 AAGAAAATTT TCTTGGCC TATTGCCAAG chr22:28307482-28307562 23 4.79e-04 gcagAAATAC AACTGGCA CTTTGCCAAC chr5:41747504-41747584 30 5.24e-04 actgagtatg ggttggca ctgtgccaag chr16:1321949-1322029 59 5.24e-04 GCCTCTGCAT GGTTGGCA CCCTGCCAGC chr1:155066466-155066546 49 5.24e-04 AGGGTGTGGG TGTTGGCT GGGAGGGACT chr1:155056652-155056732 35 5.24e-04 AGTTTGGGCT GGTTGGCA TGATGCCATG chr3:48080256-48080336 43 5.24e-04 tgcttttaag agttggct gtAggccaag chr6:84769033-84769113 39 5.24e-04 GGAACATCAC TGTTGGCT CTTTGCCAGG chr1:174932800-174932880 23 5.83e-04 tataggccaa atctggct cactgccagt chr1:67907041-67907121 37 5.83e-04 ATACTCAGTC CCTTGGCT GCCTGCCAGG chr5:133802625-133802705 41 5.83e-04 AGGCCTGTCC CCTTGGCT TGTTGCCAAA chr21:39251391-39251471 21 5.83e-04 TCTTGCTATG ATCTGGCT AGGTGCCAAG chr5:53239920-53240000 39 5.83e-04 ACACCACCAT GTCTGGCA CAGAGCCAAA chr3:142889716-142889796 41 5.83e-04 TAACGTTCTT CCTTGGCT GGGTGCCAAA chr17:18768470-18768550 23 6.28e-04 ACCTTTTTAT TTTTGGCC CACTGCCAAA chr5:32218078-32218158 22 6.28e-04 TAAAATGAGT ATTTGGCC AGCAGCCAAA chr3:159819938-159820018 26 6.28e-04 ATCCATGAGT TTTTGGCC ACGTGCCAAG chr6:111752341-111752421 27 6.28e-04 AGCCATGAGT TTTTGGCC ACGTGCCAAG chr10:18896615-18896695 40 6.28e-04 acatctggag CATTGGCA TGGGGCCaag chr9:101267326-101267406 22 6.28e-04 ggaaattaga ttttggcc caatgccaaa chr4:84160140-84160220 41 6.28e-04 ttgtctccac caTTggca cactgccaag chr1:46341826-46341906 20 6.28e-04 ttatacatta cattggca gtgtgccaag chr18:12539296-12539376 44 6.28e-04 acaagctctt ttttggcc tgctgccagc chr2:109249996-109250076 25 6.28e-04 CAGCCTATGA ATTTGGCC TCTTGCCAAG chr17:36910114-36910194 20 6.28e-04 GTTGGGGAAG CATTGGCA ATGTGCCAAA chr1:183998448-183998528 21 6.56e-04 ctaggtcact cgctggca gcttgccaag chr20:32026428-32026508 22 6.56e-04 aatcaggtct gcttggct ctatgccaac chr17:58719291-58719371 43 7.46e-04 GAAAAAAGGG AATTGGCT GTCTGCCAGT chr10:43230165-43230245 21 7.46e-04 CGCCACAAGG CTTTGGCT CCCTGCCAGC chr19:52028080-52028160 26 7.46e-04 agctccccag gattggca tggagccaag chr1:206629271-206629351 42 7.46e-04 AGGCCCTGAA ACCTGGCC CCGTGCCAGC chr12:111137485-11113756 25 7.46e-04 GCCCCTCCTC TCCTGGcc gtgtgccagg chr13:67798485-67798565 38 7.46e-04 GCTACTGCGG GATTGGCA CCTGGCCAGC chr19:5955044-5955124 41 7.46e-04 GTCCATTTAG AATTGGCT GTGAGCCAAT chr1:159851802-159851882 20 7.89e-04 CTTCCTGTAG TGCTGGCT CTCTGCCAGC chr11:50017301-50017381 41 8.46e-04 tgaggcacat tgttggcc ctttgccaaa chr10:49592780-49592860 34 8.46e-04 AGAGTTTCAT AGTTGGCC AGGTGCCAAG chr4:81018722-81018802 34 8.46e-04 TGTTCAGTTC AGTTGGCC ACATGCCAAC chr22:42356554-42356634 42 9.03e-04 tccaggcatg atctggcc tgcagccaag chr2:58821472-58821552 24 9.03e-04 GAGCTAGTAT TTCTGGCC CTGAGCCAGC chr6:118823480-118823560 22 9.03e-04 AACCATGAGT TTCTGGCC CCATGCCAAG chr6:34384042-34384122 20 9.03e-04 TCACAGCTCT CACTGGCA TTGTGCCAGG chr1:6656556-6656636 40 9.31e-04 atagacacga gcctggct gtgtgccaag chr6:168212496-168212576 28 9.31e-04 GCCATGGTTG GCCTGGCT TCTTGCCAAG chr11:111667898-11166797 20 1.00e-03 tgagctattc aactggct tgctgccaac chr7:128163458-128163538 39 1.00e-03 gctccccagt gactggca gcatgccagg chr17:60548216-60548296 39 1.00e-03 gctccccagt gactggca gcatgccagg chr6:34158045-34158125 23 1.10e-03 GATGAGACAG AGCTGGCC ATGTGCCAGT chr5:179297717-179297797 26 1.10e-03 AGAGCTGGTC TGCTGGCC CCAGAGAAGG chr5:139129014-139129094 40 1.10e-03 agctaggatg tgctggcc ctgtgccaaa chr13:49867052-49867132 21 1.15e-03 ACCATCCAAA CATTGGCT CCATGCCAGG chr1:212911073-212911153 24 1.15e-03 GGGCAGGAAA CATTGGCT ACATGCCAAT chr19:53400206-53400286 40 1.20e-03 ctcagcattt cgttggcc aagggccaaa chr15:63729155-63729235 33 1.26e-03 TACTTCCTGC AACTGGCC TGCTGCCAAC chr7:32977401-32977481 23 1.33e-03 ataatcagag acttggcg aggtgccagg chr7:129624446-129624526 21 1.33e-03 gagtcaccat gtctggcc AGtattgttt chr12:4681029-4681109 19 1.40e-03 ggttttactg gactggct cagtgccaac chr10:61000481-61000561 19 1.59e-03 AGGTTTATAT TCCTGGAA CATTGCCAAT chr6:167418985-167419065 36 1.71e-03 CTTTCCGAGA AGTTGGAA CGGTGCCAGC chr5:81032036-81032116 42 1.85e-03 CCAAGCACAA AATTGGCG CTATGCCAAA chr17:73507962-73508042 36 2.07e-03 CCAAGGCCCC ACTGGGCA GGTTGCCAAA chr6:49574944-49575024 23 2.41e-03 TCAGTGTCTT TCCTGGAT CTCAGCCAAA chr7:2064085-2064165 29 2.83e-03 atcagcatgt tgctgtca catagaaatt chr15:42868155-42868235 42 2.83e-03 GGGTGAGCGT CGCTGGCG TCCTGCCAGC chr21:27089996-27090076 34 3.98e-03 ATGTCATCAT CTCTGGAT GGCTGCCAAC chr1:16576369-16576449 51 4.21e-03 AAATATGATT GATTGTCA GAAATTTCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:11087745-11087825 3e-05 22_[+2]_50 chr16:50357558-50357638 3e-05 21_[+2]_51 chr21:35916380-35916460 3e-05 21_[+2]_51 chr11:110350668-11035074 3e-05 40_[+2]_32 chr3:50648139-50648219 3e-05 20_[+2]_52 chr12:65721019-65721099 3e-05 28_[+2]_44 chr14:24895068-24895148 3e-05 22_[+2]_50 chr9:116104512-116104592 3e-05 40_[+2]_32 chr9:37349065-37349145 3e-05 41_[+2]_31 chr11:57019373-57019453 3e-05 39_[+2]_33 chr19:49043023-49043103 3e-05 43_[+2]_29 chr6:110529022-110529102 3e-05 21_[+2]_51 chr17:30660373-30660453 3e-05 37_[+2]_35 chr17:36375498-36375578 3e-05 16_[+2]_56 chr2:58467862-58467942 3e-05 22_[+2]_50 chr6:86310605-86310685 3e-05 42_[+2]_30 chr10:13743750-13743830 3e-05 35_[+2]_37 chr6:67831204-67831284 3e-05 42_[+2]_30 chr12:56544496-56544576 3e-05 39_[+2]_33 chr3:128102495-128102575 3e-05 19_[+2]_53 chr12:111851038-11185111 3e-05 19_[+2]_53 chr10:70558415-70558495 3e-05 24_[+2]_48 chr17:45646405-45646485 3e-05 21_[+2]_51 chr1:52719237-52719317 6.3e-05 26_[+2]_46 chr5:109390096-109390176 6.3e-05 41_[+2]_31 chr7:77793962-77794042 6.3e-05 23_[+2]_49 chr8:87542566-87542646 6.3e-05 24_[+2]_48 chr10:89346129-89346209 6.3e-05 41_[+2]_31 chr12:69983023-69983103 6.3e-05 45_[+2]_27 chr2:179730433-179730513 6.3e-05 21_[+2]_51 chr1:173496482-173496562 6.3e-05 41_[+2]_31 chr2:170504166-170504246 6.3e-05 35_[+2]_37 chr7:127443789-127443869 6.3e-05 21_[+2]_51 chr4:155360535-155360615 6.3e-05 26_[+2]_46 chr12:66018483-66018563 6.3e-05 21_[+2]_51 chr9:90431106-90431186 6.3e-05 40_[+2]_32 chr1:11717887-11717967 6.3e-05 21_[+2]_51 chr10:127457006-12745708 6.3e-05 40_[+2]_32 chr15:92012991-92013071 6.3e-05 42_[+2]_30 chr6:84695588-84695668 6.3e-05 20_[+2]_52 chr9:98665833-98665913 6.3e-05 40_[+2]_32 chr1:226037817-226037897 6.3e-05 43_[+2]_29 chr15:20398852-20398932 6.3e-05 21_[+2]_51 chr6:660308-660388 9.1e-05 9_[+2]_63 chr1:181096371-181096451 9.1e-05 42_[+2]_30 chr6:2770606-2770686 9.1e-05 39_[+2]_33 chr5:96264763-96264843 9.1e-05 42_[+2]_30 chr6:43404429-43404509 9.1e-05 18_[+2]_54 chr1:89148747-89148827 9.1e-05 24_[+2]_48 chr1:52968621-52968701 9.1e-05 42_[+2]_30 chr12:121842702-12184278 9.1e-05 20_[+2]_52 chr1:36794418-36794498 9.1e-05 19_[+2]_53 chr1:213088748-213088828 9.1e-05 17_[+2]_55 chr3:52265627-52265707 9.1e-05 32_[+2]_40 chr2:219184837-219184917 9.1e-05 43_[+2]_29 chr1:27442882-27442962 9.1e-05 36_[+2]_36 chr12:120529322-12052940 9.1e-05 19_[+2]_53 chr3:182251341-182251421 9.1e-05 39_[+2]_33 chr6:164163154-164163234 9.1e-05 42_[+2]_30 chr17:38643118-38643198 9.1e-05 42_[+2]_30 chr18:43336128-43336208 0.00012 23_[+2]_49 chr6:118981542-118981622 0.00012 44_[+2]_28 chr2:175177462-175177542 0.00012 23_[+2]_49 chr2:58269814-58269894 0.00012 22_[+2]_50 chr8:38354962-38355042 0.00012 38_[+2]_34 chr6:44073013-44073093 0.00012 22_[+2]_50 chr6:80842842-80842922 0.00012 40_[+2]_32 chr8:61664332-61664412 0.00012 40_[+2]_32 chr19:58153936-58154016 0.00012 40_[+2]_32 chr1:62274748-62274828 0.00012 40_[+2]_32 chr3:38199210-38199290 0.00012 43_[+2]_29 chr6:36056181-36056261 0.00012 25_[+2]_47 chr20:39099099-39099179 0.00012 34_[+2]_38 chr3:170021678-170021758 0.00012 40_[+2]_32 chr1:185128089-185128169 0.00012 42_[+2]_30 chr5:31978712-31978792 0.00012 42_[+2]_30 chrX:44806132-44806212 0.00017 35_[+2]_37 chr10:103305795-10330587 0.00017 22_[+2]_50 chr15:80325987-80326067 0.00017 23_[+2]_49 chr2:130430975-130431055 0.00017 20_[+2]_52 chr17:57698475-57698555 0.00017 43_[+2]_29 chr1:166664521-166664601 0.00017 22_[+2]_50 chr5:16406899-16406979 0.00017 25_[+2]_47 chr16:23530106-23530186 0.00017 43_[+2]_29 chr10:126480797-12648087 0.00017 32_[+2]_40 chr12:74502666-74502746 0.00017 22_[+2]_50 chr10:97821157-97821237 0.00017 24_[+2]_48 chr2:68815850-68815930 0.00017 43_[+2]_29 chr6:12861986-12862066 0.00017 3_[+2]_69 chr2:189314866-189314946 0.00017 35_[+2]_37 chr2:69690090-69690170 0.00017 19_[+2]_53 chr15:59048298-59048378 0.00017 39_[+2]_33 chr11:59609954-59610034 0.00017 38_[+2]_34 chr7:111842955-111843035 0.00017 21_[+2]_51 chr14:77414058-77414138 0.00017 36_[+2]_36 chr1:47935202-47935282 0.00017 22_[+2]_50 chr4:129709344-129709424 0.00017 42_[+2]_30 chr1:230281382-230281462 0.00017 18_[+2]_54 chr1:182299493-182299573 0.00021 19_[+2]_53 chr4:124533105-124533185 0.00021 41_[+2]_31 chr16:15886630-15886710 0.00021 21_[+2]_51 chr1:168248646-168248726 0.00021 39_[+2]_33 chr19:10382331-10382411 0.00021 42_[+2]_30 chr12:57639184-57639264 0.00021 35_[+2]_37 chr17:44820325-44820405 0.00021 19_[+2]_53 chr16:30437836-30437916 0.00021 21_[+2]_51 chr12:127374806-12737488 0.00021 40_[+2]_32 chr1:55202065-55202145 0.00021 42_[+2]_30 chr22:32263078-32263158 0.00021 24_[+2]_48 chr1:235113813-235113893 0.00021 19_[+2]_53 chr10:135173361-13517344 0.00021 24_[+2]_48 chr8:42534724-42534804 0.00021 21_[+2]_51 chr5:138977548-138977628 0.00021 3_[+2]_69 chr2:10367929-10368009 0.00021 22_[+2]_50 chr18:12375590-12375670 0.00021 19_[+2]_53 chr20:44884243-44884323 0.00021 21_[+2]_51 chr10:14480229-14480309 0.00021 22_[+2]_50 chr6:164114331-164114411 0.00021 21_[+2]_51 chr6:74102069-74102149 0.00021 22_[+2]_50 chr14:56066226-56066306 0.00021 21_[+2]_51 chr16:84853266-84853346 0.00021 19_[+2]_53 chr12:110950797-11095087 0.00021 38_[+2]_34 chr3:71235312-71235392 0.00026 20_[+2]_52 chr3:25861922-25862002 0.00026 19_[+2]_53 chr1:204527739-204527819 0.00026 20_[+2]_52 chr3:41074367-41074447 0.00026 21_[+2]_51 chr13:113812408-11381248 0.00026 19_[+2]_53 chr1:183014577-183014657 0.00026 21_[+2]_51 chr5:105176646-105176726 0.00026 23_[+2]_49 chr2:179349545-179349625 0.00026 32_[+2]_40 chr2:120278731-120278811 0.00026 21_[+2]_51 chr7:102948412-102948492 0.00026 35_[+2]_37 chr10:106016584-10601666 0.00026 39_[+2]_33 chr1:185690837-185690917 0.00026 39_[+2]_33 chr1:171724271-171724351 0.00029 40_[+2]_32 chr16:70457854-70457934 0.00029 40_[+2]_32 chr2:27228964-27229044 0.00029 19_[+2]_53 chr17:40228554-40228634 0.00029 19_[+2]_53 chr20:36509225-36509305 0.00029 22_[+2]_50 chr7:128119295-128119375 0.00029 18_[+2]_54 chr12:104781130-10478121 0.00029 39_[+2]_33 chr8:60576766-60576846 0.00029 42_[+2]_30 chr17:73154229-73154309 0.00029 43_[+2]_29 chr6:90186129-90186209 0.00029 42_[+2]_30 chr11:75187303-75187383 0.00029 42_[+2]_30 chr22:22939485-22939565 0.00029 41_[+2]_31 chr4:17546514-17546594 0.00035 21_[+2]_51 chr22:23337501-23337581 0.00035 41_[+2]_31 chr8:97287686-97287766 0.00035 21_[+2]_51 chr1:153853643-153853723 0.00035 18_[+2]_54 chr5:153603056-153603136 0.00035 24_[+2]_48 chr9:130742057-130742137 0.00035 21_[+2]_51 chr3:43746360-43746440 0.00035 37_[+2]_35 chr9:101669200-101669280 0.00035 41_[+2]_31 chr4:24078593-24078673 0.00035 36_[+2]_36 chr16:75088262-75088342 0.00035 20_[+2]_52 chr3:99587335-99587415 0.00035 24_[+2]_48 chr15:64854342-64854422 0.00035 40_[+2]_32 chrX:39615085-39615165 0.00035 41_[+2]_31 chr10:74655154-74655234 0.00035 20_[+2]_52 chr18:58756124-58756204 0.00035 11_[+2]_61 chr16:75607178-75607258 0.00035 24_[+2]_48 chr5:131699157-131699237 0.00035 2_[+2]_70 chr7:66725252-66725332 0.00035 18_[+2]_54 chr5:145593165-145593245 0.00035 41_[+2]_31 chrX:38508620-38508700 0.00035 42_[+2]_30 chr19:7683441-7683521 0.00035 35_[+2]_37 chr11:72125376-72125456 0.00041 38_[+2]_34 chr15:41533575-41533655 0.00041 18_[+2]_54 chr19:7764425-7764505 0.00041 19_[+2]_53 chr5:42621051-42621131 0.00041 16_[+2]_56 chr2:219187503-219187583 0.00041 18_[+2]_54 chr8:80872545-80872625 0.00041 42_[+2]_30 chr11:123105930-12310601 0.00041 36_[+2]_36 chr1:223919294-223919374 0.00041 36_[+2]_36 chr15:34940233-34940313 0.00048 18_[+2]_54 chr1:91023411-91023491 0.00048 18_[+2]_54 chr2:33050442-33050522 0.00048 39_[+2]_33 chr3:13459669-13459749 0.00048 20_[+2]_52 chr1:111323659-111323739 0.00048 53_[+2]_19 chr1:61546936-61547016 0.00048 19_[+2]_53 chr2:20553382-20553462 0.00048 41_[+2]_31 chr11:70040042-70040122 0.00048 21_[+2]_51 chr6:27360560-27360640 0.00048 40_[+2]_32 chr2:57985980-57986060 0.00048 24_[+2]_48 chr22:28307482-28307562 0.00048 22_[+2]_50 chr5:41747504-41747584 0.00052 29_[+2]_43 chr16:1321949-1322029 0.00052 58_[+2]_14 chr1:155066466-155066546 0.00052 48_[+2]_24 chr1:155056652-155056732 0.00052 34_[+2]_38 chr3:48080256-48080336 0.00052 42_[+2]_30 chr6:84769033-84769113 0.00052 38_[+2]_34 chr1:174932800-174932880 0.00058 22_[+2]_50 chr1:67907041-67907121 0.00058 36_[+2]_36 chr5:133802625-133802705 0.00058 40_[+2]_32 chr21:39251391-39251471 0.00058 20_[+2]_52 chr5:53239920-53240000 0.00058 38_[+2]_34 chr3:142889716-142889796 0.00058 40_[+2]_32 chr17:18768470-18768550 0.00063 22_[+2]_50 chr5:32218078-32218158 0.00063 21_[+2]_51 chr3:159819938-159820018 0.00063 25_[+2]_47 chr6:111752341-111752421 0.00063 26_[+2]_46 chr10:18896615-18896695 0.00063 39_[+2]_33 chr9:101267326-101267406 0.00063 21_[+2]_51 chr4:84160140-84160220 0.00063 40_[+2]_32 chr1:46341826-46341906 0.00063 19_[+2]_53 chr18:12539296-12539376 0.00063 43_[+2]_29 chr2:109249996-109250076 0.00063 24_[+2]_48 chr17:36910114-36910194 0.00063 19_[+2]_53 chr1:183998448-183998528 0.00066 20_[+2]_52 chr20:32026428-32026508 0.00066 21_[+2]_51 chr17:58719291-58719371 0.00075 42_[+2]_30 chr10:43230165-43230245 0.00075 20_[+2]_52 chr19:52028080-52028160 0.00075 25_[+2]_47 chr1:206629271-206629351 0.00075 41_[+2]_31 chr12:111137485-11113756 0.00075 24_[+2]_48 chr13:67798485-67798565 0.00075 37_[+2]_35 chr19:5955044-5955124 0.00075 40_[+2]_32 chr1:159851802-159851882 0.00079 19_[+2]_53 chr11:50017301-50017381 0.00085 40_[+2]_32 chr10:49592780-49592860 0.00085 33_[+2]_39 chr4:81018722-81018802 0.00085 33_[+2]_39 chr22:42356554-42356634 0.0009 41_[+2]_31 chr2:58821472-58821552 0.0009 23_[+2]_49 chr6:118823480-118823560 0.0009 21_[+2]_51 chr6:34384042-34384122 0.0009 19_[+2]_53 chr1:6656556-6656636 0.00093 39_[+2]_33 chr6:168212496-168212576 0.00093 27_[+2]_45 chr11:111667898-11166797 0.001 19_[+2]_53 chr7:128163458-128163538 0.001 38_[+2]_34 chr17:60548216-60548296 0.001 38_[+2]_34 chr6:34158045-34158125 0.0011 22_[+2]_50 chr5:179297717-179297797 0.0011 25_[+2]_47 chr5:139129014-139129094 0.0011 39_[+2]_33 chr13:49867052-49867132 0.0011 20_[+2]_52 chr1:212911073-212911153 0.0011 23_[+2]_49 chr19:53400206-53400286 0.0012 39_[+2]_33 chr15:63729155-63729235 0.0013 32_[+2]_40 chr7:32977401-32977481 0.0013 22_[+2]_50 chr7:129624446-129624526 0.0013 20_[+2]_52 chr12:4681029-4681109 0.0014 18_[+2]_54 chr10:61000481-61000561 0.0016 18_[+2]_54 chr6:167418985-167419065 0.0017 35_[+2]_37 chr5:81032036-81032116 0.0019 41_[+2]_31 chr17:73507962-73508042 0.0021 35_[+2]_37 chr6:49574944-49575024 0.0024 22_[+2]_50 chr7:2064085-2064165 0.0028 28_[+2]_44 chr15:42868155-42868235 0.0028 41_[+2]_31 chr21:27089996-27090076 0.004 33_[+2]_39 chr1:16576369-16576449 0.0042 50_[+2]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WYYTGGCA width=8 seqs=250 chr19:11087745-11087825 ( 23) TCTTGGCA 1 chr16:50357558-50357638 ( 22) TCTTGGCA 1 chr21:35916380-35916460 ( 22) ACTTGGCA 1 chr11:110350668-11035074 ( 41) ACTTGGCA 1 chr3:50648139-50648219 ( 21) ACTTGGCA 1 chr12:65721019-65721099 ( 29) ACTTGGCA 1 chr14:24895068-24895148 ( 23) TCTTGGCA 1 chr9:116104512-116104592 ( 41) TCTTGGCA 1 chr9:37349065-37349145 ( 42) ACTTGGCA 1 chr11:57019373-57019453 ( 40) ACTTGGCA 1 chr19:49043023-49043103 ( 44) TCTTGGCA 1 chr6:110529022-110529102 ( 22) ACTTGGCA 1 chr17:30660373-30660453 ( 38) ACTTGGCA 1 chr17:36375498-36375578 ( 17) ACTTGGCA 1 chr2:58467862-58467942 ( 23) ACTTGGCA 1 chr6:86310605-86310685 ( 43) ACTTGGCA 1 chr10:13743750-13743830 ( 36) ACTTGGCA 1 chr6:67831204-67831284 ( 43) ACTTGGCA 1 chr12:56544496-56544576 ( 40) ACTTGGCA 1 chr3:128102495-128102575 ( 20) ACTTGGCA 1 chr12:111851038-11185111 ( 20) TCTTGGCA 1 chr10:70558415-70558495 ( 25) ACTTGGCA 1 chr17:45646405-45646485 ( 22) TCTTGGCA 1 chr1:52719237-52719317 ( 27) TTTTGGCA 1 chr5:109390096-109390176 ( 42) TTTTGGCA 1 chr7:77793962-77794042 ( 24) TTTTGGCA 1 chr8:87542566-87542646 ( 25) TTTTGGCA 1 chr10:89346129-89346209 ( 42) ATTTGGCA 1 chr12:69983023-69983103 ( 46) TTTTGGCA 1 chr2:179730433-179730513 ( 22) TTTTGGCA 1 chr1:173496482-173496562 ( 42) ATTTGGCA 1 chr2:170504166-170504246 ( 36) TTTTGGCA 1 chr7:127443789-127443869 ( 22) TTTTGGCA 1 chr4:155360535-155360615 ( 27) TTTTGGCA 1 chr12:66018483-66018563 ( 22) TTTTGGCA 1 chr9:90431106-90431186 ( 41) TTTTGGCA 1 chr1:11717887-11717967 ( 22) TTTTGGCA 1 chr10:127457006-12745708 ( 41) ATTTGGCA 1 chr15:92012991-92013071 ( 43) ATTTGGCA 1 chr6:84695588-84695668 ( 21) ATTTGGCA 1 chr9:98665833-98665913 ( 41) TTTTGGCA 1 chr1:226037817-226037897 ( 44) TTTTGGCA 1 chr15:20398852-20398932 ( 22) TTTTGGCA 1 chr6:660308-660388 ( 10) TCCTGGCA 1 chr1:181096371-181096451 ( 43) ACCTGGCA 1 chr6:2770606-2770686 ( 40) TCCTGGCA 1 chr5:96264763-96264843 ( 43) TCCTGGCA 1 chr6:43404429-43404509 ( 19) TCCTGGCA 1 chr1:89148747-89148827 ( 25) TCCTGGCA 1 chr1:52968621-52968701 ( 43) ACCTGGCA 1 chr12:121842702-12184278 ( 21) TCCTGGCA 1 chr1:36794418-36794498 ( 20) ACCTGGCA 1 chr1:213088748-213088828 ( 18) ACCTGGCA 1 chr3:52265627-52265707 ( 33) ACCTGGCA 1 chr2:219184837-219184917 ( 44) ACCTGGCA 1 chr1:27442882-27442962 ( 37) TCCTGGCA 1 chr12:120529322-12052940 ( 20) ACCTGGCA 1 chr3:182251341-182251421 ( 40) TCCTGGCA 1 chr6:164163154-164163234 ( 43) TCCTGGCA 1 chr17:38643118-38643198 ( 43) ACCTGGCA 1 chr18:43336128-43336208 ( 24) AGTTGGCA 1 chr6:118981542-118981622 ( 45) AGTTGGCA 1 chr2:175177462-175177542 ( 24) TGTTGGCA 1 chr2:58269814-58269894 ( 23) AGTTGGCA 1 chr8:38354962-38355042 ( 39) AGTTGGCA 1 chr6:44073013-44073093 ( 23) AGTTGGCA 1 chr6:80842842-80842922 ( 41) TGTTGGCA 1 chr8:61664332-61664412 ( 41) AGTTGGCA 1 chr19:58153936-58154016 ( 41) TGTTGGCA 1 chr1:62274748-62274828 ( 41) TGTTGGCA 1 chr3:38199210-38199290 ( 44) AGTTGGCA 1 chr6:36056181-36056261 ( 26) AGTTGGCA 1 chr20:39099099-39099179 ( 35) AGTTGGCA 1 chr3:170021678-170021758 ( 41) AGTTGGCA 1 chr1:185128089-185128169 ( 43) TGTTGGCA 1 chr5:31978712-31978792 ( 43) AGTTGGCA 1 chrX:44806132-44806212 ( 36) ATCTGGCA 1 chr10:103305795-10330587 ( 23) ATCTGGCA 1 chr15:80325987-80326067 ( 24) ATCTGGCA 1 chr2:130430975-130431055 ( 21) ATCTGGCA 1 chr17:57698475-57698555 ( 44) ATCTGGCA 1 chr1:166664521-166664601 ( 23) ATCTGGCA 1 chr5:16406899-16406979 ( 26) ATCTGGCA 1 chr16:23530106-23530186 ( 44) ATCTGGCA 1 chr10:126480797-12648087 ( 33) CCTTGGCA 1 chr12:74502666-74502746 ( 23) TTCTGGCA 1 chr10:97821157-97821237 ( 25) TTCTGGCA 1 chr2:68815850-68815930 ( 44) TTCTGGCA 1 chr6:12861986-12862066 ( 4) TTCTGGCA 1 chr2:189314866-189314946 ( 36) TTCTGGCA 1 chr2:69690090-69690170 ( 20) CCTTGGCA 1 chr15:59048298-59048378 ( 40) CCTTGGCA 1 chr11:59609954-59610034 ( 39) TTCTGGCA 1 chr7:111842955-111843035 ( 22) TTCTGGCA 1 chr14:77414058-77414138 ( 37) CCTTGGCA 1 chr1:47935202-47935282 ( 23) TTCTGGCA 1 chr4:129709344-129709424 ( 43) CCTTGGCA 1 chr1:230281382-230281462 ( 19) CCTTGGCA 1 chr1:182299493-182299573 ( 20) GCTTGGCA 1 chr4:124533105-124533185 ( 42) TCTTGGCT 1 chr16:15886630-15886710 ( 22) TCTTGGCT 1 chr1:168248646-168248726 ( 40) GCTTGGCA 1 chr19:10382331-10382411 ( 43) ACTTGGCT 1 chr12:57639184-57639264 ( 36) TCTTGGCT 1 chr17:44820325-44820405 ( 20) TCTTGGCT 1 chr16:30437836-30437916 ( 22) TCTTGGCT 1 chr12:127374806-12737488 ( 41) ACTTGGCT 1 chr1:55202065-55202145 ( 43) TCTTGGCT 1 chr22:32263078-32263158 ( 25) ACTTGGCT 1 chr1:235113813-235113893 ( 20) GCTTGGCA 1 chr10:135173361-13517344 ( 25) TCTTGGCT 1 chr8:42534724-42534804 ( 22) TCTTGGCT 1 chr5:138977548-138977628 ( 4) TCTTGGCT 1 chr2:10367929-10368009 ( 23) TCTTGGCT 1 chr18:12375590-12375670 ( 20) TCTTGGCT 1 chr20:44884243-44884323 ( 22) TCTTGGCT 1 chr10:14480229-14480309 ( 23) GCTTGGCA 1 chr6:164114331-164114411 ( 22) TCTTGGCT 1 chr6:74102069-74102149 ( 23) TCTTGGCT 1 chr14:56066226-56066306 ( 22) TCTTGGCT 1 chr16:84853266-84853346 ( 20) GCTTGGCA 1 chr12:110950797-11095087 ( 39) TCTTGGCT 1 chr3:71235312-71235392 ( 21) CTTTGGCA 1 chr3:25861922-25862002 ( 20) AATTGGCA 1 chr1:204527739-204527819 ( 21) CTTTGGCA 1 chr3:41074367-41074447 ( 22) AATTGGCA 1 chr13:113812408-11381248 ( 20) TATTGGCA 1 chr1:183014577-183014657 ( 22) AATTGGCA 1 chr5:105176646-105176726 ( 24) AATTGGCA 1 chr2:179349545-179349625 ( 33) CTTTGGCA 1 chr2:120278731-120278811 ( 22) AATTGGCA 1 chr7:102948412-102948492 ( 36) CTTTGGCA 1 chr10:106016584-10601666 ( 40) CTTTGGCA 1 chr1:185690837-185690917 ( 40) AATTGGCA 1 chr1:171724271-171724351 ( 41) TGCTGGCA 1 chr16:70457854-70457934 ( 41) AGCTGGCA 1 chr2:27228964-27229044 ( 20) AGCTGGCA 1 chr17:40228554-40228634 ( 20) AGCTGGCA 1 chr20:36509225-36509305 ( 23) AGCTGGCA 1 chr7:128119295-128119375 ( 19) AGCTGGCA 1 chr12:104781130-10478121 ( 40) AGCTGGCA 1 chr8:60576766-60576846 ( 43) TGCTGGCA 1 chr17:73154229-73154309 ( 44) AGCTGGCA 1 chr6:90186129-90186209 ( 43) TGCTGGCA 1 chr11:75187303-75187383 ( 43) AGCTGGCA 1 chr22:22939485-22939565 ( 42) AGCTGGCA 1 chr4:17546514-17546594 ( 22) GTTTGGCA 1 chr22:23337501-23337581 ( 42) TTTTGGCT 1 chr8:97287686-97287766 ( 22) TTTTGGCT 1 chr1:153853643-153853723 ( 19) CCCTGGCA 1 chr5:153603056-153603136 ( 25) TTTTGGCT 1 chr9:130742057-130742137 ( 22) ATTTGGCT 1 chr3:43746360-43746440 ( 38) ATTTGGCT 1 chr9:101669200-101669280 ( 42) CCCTGGCA 1 chr4:24078593-24078673 ( 37) TTTTGGCT 1 chr16:75088262-75088342 ( 21) CCCTGGCA 1 chr3:99587335-99587415 ( 25) GTTTGGCA 1 chr15:64854342-64854422 ( 41) GTTTGGCA 1 chrX:39615085-39615165 ( 42) CCCTGGCA 1 chr10:74655154-74655234 ( 21) ATTTGGCT 1 chr18:58756124-58756204 ( 12) TTTTGGCT 1 chr16:75607178-75607258 ( 25) TTTTGGCT 1 chr5:131699157-131699237 ( 3) ATTTGGCT 1 chr7:66725252-66725332 ( 19) CCCTGGCA 1 chr5:145593165-145593245 ( 42) TTTTGGCT 1 chrX:38508620-38508700 ( 43) GTTTGGCA 1 chr19:7683441-7683521 ( 36) GTTTGGCA 1 chr11:72125376-72125456 ( 39) TCCTGGCT 1 chr15:41533575-41533655 ( 19) GCCTGGCA 1 chr19:7764425-7764505 ( 20) TCCTGGCT 1 chr5:42621051-42621131 ( 17) TCCTGGCT 1 chr2:219187503-219187583 ( 19) GCCTGGCA 1 chr8:80872545-80872625 ( 43) TCCTGGCT 1 chr11:123105930-12310601 ( 37) GCCTGGCA 1 chr1:223919294-223919374 ( 37) GCCTGGCA 1 chr15:34940233-34940313 ( 19) CTCTGGCA 1 chr1:91023411-91023491 ( 19) CTCTGGCA 1 chr2:33050442-33050522 ( 40) TCTTGGCC 1 chr3:13459669-13459749 ( 21) CTCTGGCA 1 chr1:111323659-111323739 ( 54) TCTTGGCC 1 chr1:61546936-61547016 ( 20) TACTGGCA 1 chr2:20553382-20553462 ( 42) TCTTGGCC 1 chr11:70040042-70040122 ( 22) TACTGGCA 1 chr6:27360560-27360640 ( 41) ACTTGGCC 1 chr2:57985980-57986060 ( 25) TCTTGGCC 1 chr22:28307482-28307562 ( 23) AACTGGCA 1 chr5:41747504-41747584 ( 30) GGTTGGCA 1 chr16:1321949-1322029 ( 59) GGTTGGCA 1 chr1:155066466-155066546 ( 49) TGTTGGCT 1 chr1:155056652-155056732 ( 35) GGTTGGCA 1 chr3:48080256-48080336 ( 43) AGTTGGCT 1 chr6:84769033-84769113 ( 39) TGTTGGCT 1 chr1:174932800-174932880 ( 23) ATCTGGCT 1 chr1:67907041-67907121 ( 37) CCTTGGCT 1 chr5:133802625-133802705 ( 41) CCTTGGCT 1 chr21:39251391-39251471 ( 21) ATCTGGCT 1 chr5:53239920-53240000 ( 39) GTCTGGCA 1 chr3:142889716-142889796 ( 41) CCTTGGCT 1 chr17:18768470-18768550 ( 23) TTTTGGCC 1 chr5:32218078-32218158 ( 22) ATTTGGCC 1 chr3:159819938-159820018 ( 26) TTTTGGCC 1 chr6:111752341-111752421 ( 27) TTTTGGCC 1 chr10:18896615-18896695 ( 40) CATTGGCA 1 chr9:101267326-101267406 ( 22) TTTTGGCC 1 chr4:84160140-84160220 ( 41) CATTGGCA 1 chr1:46341826-46341906 ( 20) CATTGGCA 1 chr18:12539296-12539376 ( 44) TTTTGGCC 1 chr2:109249996-109250076 ( 25) ATTTGGCC 1 chr17:36910114-36910194 ( 20) CATTGGCA 1 chr1:183998448-183998528 ( 21) CGCTGGCA 1 chr20:32026428-32026508 ( 22) GCTTGGCT 1 chr17:58719291-58719371 ( 43) AATTGGCT 1 chr10:43230165-43230245 ( 21) CTTTGGCT 1 chr19:52028080-52028160 ( 26) GATTGGCA 1 chr1:206629271-206629351 ( 42) ACCTGGCC 1 chr12:111137485-11113756 ( 25) TCCTGGCC 1 chr13:67798485-67798565 ( 38) GATTGGCA 1 chr19:5955044-5955124 ( 41) AATTGGCT 1 chr1:159851802-159851882 ( 20) TGCTGGCT 1 chr11:50017301-50017381 ( 41) TGTTGGCC 1 chr10:49592780-49592860 ( 34) AGTTGGCC 1 chr4:81018722-81018802 ( 34) AGTTGGCC 1 chr22:42356554-42356634 ( 42) ATCTGGCC 1 chr2:58821472-58821552 ( 24) TTCTGGCC 1 chr6:118823480-118823560 ( 22) TTCTGGCC 1 chr6:34384042-34384122 ( 20) CACTGGCA 1 chr1:6656556-6656636 ( 40) GCCTGGCT 1 chr6:168212496-168212576 ( 28) GCCTGGCT 1 chr11:111667898-11166797 ( 20) AACTGGCT 1 chr7:128163458-128163538 ( 39) GACTGGCA 1 chr17:60548216-60548296 ( 39) GACTGGCA 1 chr6:34158045-34158125 ( 23) AGCTGGCC 1 chr5:179297717-179297797 ( 26) TGCTGGCC 1 chr5:139129014-139129094 ( 40) TGCTGGCC 1 chr13:49867052-49867132 ( 21) CATTGGCT 1 chr1:212911073-212911153 ( 24) CATTGGCT 1 chr19:53400206-53400286 ( 40) CGTTGGCC 1 chr15:63729155-63729235 ( 33) AACTGGCC 1 chr7:32977401-32977481 ( 23) ACTTGGCG 1 chr7:129624446-129624526 ( 21) GTCTGGCC 1 chr12:4681029-4681109 ( 19) GACTGGCT 1 chr10:61000481-61000561 ( 19) TCCTGGAA 1 chr6:167418985-167419065 ( 36) AGTTGGAA 1 chr5:81032036-81032116 ( 42) AATTGGCG 1 chr17:73507962-73508042 ( 36) ACTGGGCA 1 chr6:49574944-49575024 ( 23) TCCTGGAT 1 chr7:2064085-2064165 ( 29) TGCTGTCA 1 chr15:42868155-42868235 ( 42) CGCTGGCG 1 chr21:27089996-27090076 ( 34) CTCTGGAT 1 chr1:16576369-16576449 ( 51) GATTGTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.46222 E= 1.2e-253 49 -84 -112 61 -120 72 -40 24 -1461 58 -1461 131 -1461 -1461 -592 195 -1461 -1461 204 -1461 -1461 -1461 203 -500 -400 202 -1461 -1461 137 -122 -434 -23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 250 E= 1.2e-253 0.360000 0.136000 0.112000 0.392000 0.112000 0.400000 0.184000 0.304000 0.000000 0.364000 0.000000 0.636000 0.000000 0.000000 0.004000 0.996000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.992000 0.008000 0.016000 0.984000 0.000000 0.000000 0.664000 0.104000 0.012000 0.220000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYYTGGCA MEME-2 regular expression -------------------------------------------------------------------------------- [TA][CT][TC]TGGC[AT] -------------------------------------------------------------------------------- Time 7.59 secs. ******************************************************************************** ******************************************************************************** MOTIF CTGGAGTG MEME-3 width = 8 sites = 19 llr = 181 E-value = 1.1e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::1:a:2: pos.-specific C a::1:::: probability G ::89:a1a matrix T :a1:::7: bits 2.0 ** ** * 1.8 ** *** * 1.6 ** *** * 1.4 ** *** * Relative 1.2 ** *** * Entropy 1.0 ****** * (13.7 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGGAGTG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:124533105-124533185 23 1.44e-05 gtcgcccaag ctggagtg cagtggcgtg chr15:41533575-41533655 1 1.44e-05 . ctggagtg cttgccatgt chr12:57639184-57639264 17 1.44e-05 gtcacccagg ctggagtg cagtggcgca chr16:30437836-30437916 3 1.44e-05 ag ctggagtg caatggcgtg chr1:55202065-55202145 24 1.44e-05 gttgcccagg ctggagtg cggtagggag chr8:42534724-42534804 3 1.44e-05 gg ctggagtg ccgtggtgca chr6:164114331-164114411 3 1.44e-05 gg ctggagtg cagtggcgcg chr6:74102069-74102149 4 1.44e-05 agg ctggagtg caatggcgca chr12:110950797-11095087 20 1.44e-05 gtcgcccagg ctggagtg cagtggcgcg chr1:213088748-213088828 32 2.88e-05 GGCACTGTGC CTGGAGAG AGCCATTTCC chr2:219184837-219184917 64 2.88e-05 atgccagaca ctggagag ttgaagatg chr17:36910114-36910194 54 2.88e-05 GGAGCAGATT CTGGAGAG ACAAAGTCTG chr19:5955044-5955124 8 4.24e-05 CCCAAGG CTGGAGGG CAGTTATTTT chr10:61000481-61000561 55 4.24e-05 TAGGTGGCCA CTGGAGGG CAGTATCTCT chr2:120278731-120278811 63 7.28e-05 AAAGCCCTAC CTTGAGTG ACTCTTTCTC chr11:123105930-12310601 59 7.28e-05 GCCAAGTGCT CTTGAGTG ACTCCTGCTG chr2:10367929-10368009 8 7.28e-05 gcccaaa ctagagtg cacgaaatct chr18:12375590-12375670 1 7.28e-05 . ctagagtg cagtggcccg chr2:33050442-33050522 9 8.72e-05 CTTATAAA CTGCAGTG ACCTCTGAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:124533105-124533185 1.4e-05 22_[+3]_50 chr15:41533575-41533655 1.4e-05 [+3]_72 chr12:57639184-57639264 1.4e-05 16_[+3]_56 chr16:30437836-30437916 1.4e-05 2_[+3]_70 chr1:55202065-55202145 1.4e-05 23_[+3]_49 chr8:42534724-42534804 1.4e-05 2_[+3]_70 chr6:164114331-164114411 1.4e-05 2_[+3]_70 chr6:74102069-74102149 1.4e-05 3_[+3]_69 chr12:110950797-11095087 1.4e-05 19_[+3]_53 chr1:213088748-213088828 2.9e-05 31_[+3]_41 chr2:219184837-219184917 2.9e-05 63_[+3]_9 chr17:36910114-36910194 2.9e-05 53_[+3]_19 chr19:5955044-5955124 4.2e-05 7_[+3]_65 chr10:61000481-61000561 4.2e-05 54_[+3]_18 chr2:120278731-120278811 7.3e-05 62_[+3]_10 chr11:123105930-12310601 7.3e-05 58_[+3]_14 chr2:10367929-10368009 7.3e-05 7_[+3]_65 chr18:12375590-12375670 7.3e-05 [+3]_72 chr2:33050442-33050522 8.7e-05 8_[+3]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGGAGTG width=8 seqs=19 chr4:124533105-124533185 ( 23) CTGGAGTG 1 chr15:41533575-41533655 ( 1) CTGGAGTG 1 chr12:57639184-57639264 ( 17) CTGGAGTG 1 chr16:30437836-30437916 ( 3) CTGGAGTG 1 chr1:55202065-55202145 ( 24) CTGGAGTG 1 chr8:42534724-42534804 ( 3) CTGGAGTG 1 chr6:164114331-164114411 ( 3) CTGGAGTG 1 chr6:74102069-74102149 ( 4) CTGGAGTG 1 chr12:110950797-11095087 ( 20) CTGGAGTG 1 chr1:213088748-213088828 ( 32) CTGGAGAG 1 chr2:219184837-219184917 ( 64) CTGGAGAG 1 chr17:36910114-36910194 ( 54) CTGGAGAG 1 chr19:5955044-5955124 ( 8) CTGGAGGG 1 chr10:61000481-61000561 ( 55) CTGGAGGG 1 chr2:120278731-120278811 ( 63) CTTGAGTG 1 chr11:123105930-12310601 ( 59) CTTGAGTG 1 chr2:10367929-10368009 ( 8) CTAGAGTG 1 chr18:12375590-12375670 ( 1) CTAGAGTG 1 chr2:33050442-33050522 ( 9) CTGCAGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1012 E= 1.1e+000 -1089 204 -1089 -1089 -1089 -1089 -1089 196 -129 -1089 170 -129 -1089 -220 196 -1089 196 -1089 -1089 -1089 -1089 -1089 204 -1089 -70 -1089 -121 152 -1089 -1089 204 -1089 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 19 E= 1.1e+000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.105263 0.000000 0.789474 0.105263 0.000000 0.052632 0.947368 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.157895 0.000000 0.105263 0.736842 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGAGTG MEME-3 regular expression -------------------------------------------------------------------------------- CTGGAGTG -------------------------------------------------------------------------------- Time 10.60 secs. ******************************************************************************** ******************************************************************************** MOTIF CTGCCTCA MEME-4 width = 8 sites = 14 llr = 137 E-value = 1.7e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::6 pos.-specific C a:1aa:a2 probability G ::9::::: matrix T :a:::a:2 bits 2.0 ** **** 1.8 ** **** 1.6 ** **** 1.4 ******* Relative 1.2 ******* Entropy 1.0 ******* (14.1 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGCCTCA consensus C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:30437836-30437916 67 1.44e-05 agcgattctc ctgcctca gcctcc chr8:42534724-42534804 67 1.44e-05 agcgattttc ctgcctca gcctcc chr5:138977548-138977628 49 1.44e-05 caccattctt ctgcctca gcctcccgag chr2:10367929-10368009 69 1.44e-05 caccattctc ctgcctca gcct chr18:12375590-12375670 65 1.44e-05 cgccattccc ctgcctca gtctcccg chr6:164114331-164114411 67 1.44e-05 cgccattctc ctgcctca gccttc chr4:124533105-124533185 61 4.24e-05 actgccaact ctgcctcc cgggttcagg chr15:80325987-80326067 13 4.24e-05 GCCTCAGCAC CTGCCTCT CTAATCTGGC chr16:15886630-15886710 43 4.24e-05 tgccaacttt ctgcctcc caggctcagt chr13:113812408-11381248 60 4.24e-05 attgtctatg ctgcctct gctacaatgg chr17:44820325-44820405 55 4.24e-05 TCAGAAGTTG CTGCCTCT CCCTGAGGCC chr6:74102069-74102149 43 4.24e-05 ctgccaactt ctgcctcc caggttcaag chr6:660308-660388 69 5.67e-05 gctaaggacc ctccctca ggga chr20:44884243-44884323 10 5.67e-05 CTACAGGTC CTCCCTCA GGCATCTTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:30437836-30437916 1.4e-05 66_[+4]_6 chr8:42534724-42534804 1.4e-05 66_[+4]_6 chr5:138977548-138977628 1.4e-05 48_[+4]_24 chr2:10367929-10368009 1.4e-05 68_[+4]_4 chr18:12375590-12375670 1.4e-05 64_[+4]_8 chr6:164114331-164114411 1.4e-05 66_[+4]_6 chr4:124533105-124533185 4.2e-05 60_[+4]_12 chr15:80325987-80326067 4.2e-05 12_[+4]_60 chr16:15886630-15886710 4.2e-05 42_[+4]_30 chr13:113812408-11381248 4.2e-05 59_[+4]_13 chr17:44820325-44820405 4.2e-05 54_[+4]_18 chr6:74102069-74102149 4.2e-05 42_[+4]_30 chr6:660308-660388 5.7e-05 68_[+4]_4 chr20:44884243-44884323 5.7e-05 9_[+4]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGCCTCA width=8 seqs=14 chr16:30437836-30437916 ( 67) CTGCCTCA 1 chr8:42534724-42534804 ( 67) CTGCCTCA 1 chr5:138977548-138977628 ( 49) CTGCCTCA 1 chr2:10367929-10368009 ( 69) CTGCCTCA 1 chr18:12375590-12375670 ( 65) CTGCCTCA 1 chr6:164114331-164114411 ( 67) CTGCCTCA 1 chr4:124533105-124533185 ( 61) CTGCCTCC 1 chr15:80325987-80326067 ( 13) CTGCCTCT 1 chr16:15886630-15886710 ( 43) CTGCCTCC 1 chr13:113812408-11381248 ( 60) CTGCCTCT 1 chr17:44820325-44820405 ( 55) CTGCCTCT 1 chr6:74102069-74102149 ( 43) CTGCCTCC 1 chr6:660308-660388 ( 69) CTCCCTCA 1 chr20:44884243-44884323 ( 10) CTCCCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.5702 E= 1.7e+003 -1045 204 -1045 -1045 -1045 -1045 -1045 196 -1045 -77 182 -1045 -1045 204 -1045 -1045 -1045 204 -1045 -1045 -1045 -1045 -1045 196 -1045 204 -1045 -1045 115 -18 -1045 -26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 14 E= 1.7e+003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.857143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.571429 0.214286 0.000000 0.214286 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGCCTCA MEME-4 regular expression -------------------------------------------------------------------------------- CTGCCTC[ACT] -------------------------------------------------------------------------------- Time 13.55 secs. ******************************************************************************** ******************************************************************************** MOTIF CACTGCAC MEME-5 width = 8 sites = 9 llr = 96 E-value = 1.5e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::::8: pos.-specific C a:a::a2a probability G ::::a::: matrix T :::a:::: bits 2.0 ****** * 1.8 ****** * 1.6 ****** * 1.4 ****** * Relative 1.2 ******** Entropy 1.0 ******** (15.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CACTGCAC consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:70457854-70457934 66 1.44e-05 aagatcgtgc cactgcac tccagcc chr2:27228964-27229044 45 1.44e-05 aagattgcac cactgcac tctagcctgg chr17:40228554-40228634 45 1.44e-05 aagatcgcgc cactgcac tccagcctgg chr8:38354962-38355042 64 1.44e-05 aagatcatgt cactgcac tccagcctg chr17:73154229-73154309 69 1.44e-05 aagatttcgc cactgcac tcta chr10:14480229-14480309 48 1.44e-05 aagatcgtga cactgcac tccagcctgg chr22:22939485-22939565 67 1.44e-05 aagatcgcgc cactgcac tccagc chr1:159851802-159851882 44 2.80e-05 CAGCTTGGCT CACTGCCC AGTTCAAGGC chr5:139129014-139129094 12 2.80e-05 CAGCAGCAGC CACTGCCc cattctgagc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:70457854-70457934 1.4e-05 65_[+5]_7 chr2:27228964-27229044 1.4e-05 44_[+5]_28 chr17:40228554-40228634 1.4e-05 44_[+5]_28 chr8:38354962-38355042 1.4e-05 63_[+5]_9 chr17:73154229-73154309 1.4e-05 68_[+5]_4 chr10:14480229-14480309 1.4e-05 47_[+5]_25 chr22:22939485-22939565 1.4e-05 66_[+5]_6 chr1:159851802-159851882 2.8e-05 43_[+5]_29 chr5:139129014-139129094 2.8e-05 11_[+5]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACTGCAC width=8 seqs=9 chr16:70457854-70457934 ( 66) CACTGCAC 1 chr2:27228964-27229044 ( 45) CACTGCAC 1 chr17:40228554-40228634 ( 45) CACTGCAC 1 chr8:38354962-38355042 ( 64) CACTGCAC 1 chr17:73154229-73154309 ( 69) CACTGCAC 1 chr10:14480229-14480309 ( 48) CACTGCAC 1 chr22:22939485-22939565 ( 67) CACTGCAC 1 chr1:159851802-159851882 ( 44) CACTGCCC 1 chr5:139129014-139129094 ( 12) CACTGCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.1193 E= 1.5e+004 -982 204 -982 -982 196 -982 -982 -982 -982 204 -982 -982 -982 -982 -982 196 -982 -982 204 -982 -982 204 -982 -982 160 -13 -982 -982 -982 204 -982 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 1.5e+004 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.777778 0.222222 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTGCAC MEME-5 regular expression -------------------------------------------------------------------------------- CACTGC[AC]C -------------------------------------------------------------------------------- Time 16.47 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:22939485-22939565 6.16e-04 66_[+5(1.44e-05)]_6 chr17:45646405-45646485 1.63e-03 21_[+2(3.04e-05)]_3_[+1(3.04e-05)]_\ 40 chr15:20398852-20398932 2.25e-03 21_[+2(6.26e-05)]_3_[+1(1.52e-05)]_\ 40 chr17:60548216-60548296 6.17e-02 49_[+1(9.13e-05)]_23 chr17:36910114-36910194 1.11e-03 53_[+3(2.88e-05)]_19 chr12:110950797-11095087 2.47e-05 19_[+3(1.44e-05)]_53 chr6:84769033-84769113 2.22e-02 49_[+1(9.13e-05)]_23 chr19:7683441-7683521 7.36e-02 80 chr17:38643118-38643198 9.08e-03 42_[+2(9.14e-05)]_30 chr16:84853266-84853346 1.35e-02 80 chr10:70558415-70558495 2.79e-02 24_[+2(3.04e-05)]_48 chr14:56066226-56066306 1.39e-04 80 chr5:31978712-31978792 1.88e-03 80 chr1:230281382-230281462 2.01e-02 80 chr1:185128089-185128169 1.49e-02 80 chr1:226037817-226037897 4.56e-03 43_[+2(6.26e-05)]_29 chr6:164163154-164163234 4.06e-04 42_[+2(9.14e-05)]_30 chr22:28307482-28307562 3.45e-02 33_[+1(9.13e-05)]_39 chr2:109249996-109250076 2.62e-02 35_[+1(3.04e-05)]_37 chrX:38508620-38508700 1.05e-01 80 chr3:48080256-48080336 1.14e-01 80 chr15:42868155-42868235 1.58e-02 80 chr6:74102069-74102149 2.91e-07 3_[+3(1.44e-05)]_22_[+1(9.13e-05)]_\ 1_[+4(4.24e-05)]_30 chr6:164114331-164114411 1.93e-07 2_[+3(1.44e-05)]_56_[+4(1.44e-05)]_\ 6 chr11:75187303-75187383 7.11e-04 80 chr10:14480229-14480309 2.10e-05 47_[+5(1.44e-05)]_25 chr1:16576369-16576449 6.28e-02 22_[+2(6.26e-05)]_50 chr5:145593165-145593245 8.35e-02 80 chr12:111851038-11185111 4.91e-03 19_[+2(3.04e-05)]_53 chr3:182251341-182251421 1.34e-04 39_[+2(9.14e-05)]_3_[+1(4.56e-05)]_\ 22 chr1:185690837-185690917 5.64e-02 80 chr10:61000481-61000561 2.03e-03 54_[+3(4.24e-05)]_18 chr19:5955044-5955124 8.91e-03 7_[+3(4.24e-05)]_65 chr7:66725252-66725332 9.94e-03 80 chr3:128102495-128102575 9.92e-04 19_[+2(3.04e-05)]_53 chr3:142889716-142889796 3.96e-02 51_[+1(9.13e-05)]_21 chr12:120529322-12052940 5.49e-03 19_[+2(9.14e-05)]_53 chr1:155056652-155056732 1.30e-01 80 chr6:168212496-168212576 6.14e-02 80 chr9:98665833-98665913 2.20e-02 40_[+2(6.26e-05)]_32 chr10:106016584-10601666 1.22e-01 80 chr3:170021678-170021758 1.67e-02 80 chr20:39099099-39099179 3.66e-03 45_[+1(4.56e-05)]_27 chr6:84695588-84695668 1.84e-02 20_[+2(6.26e-05)]_52 chr1:155066466-155066546 6.26e-03 80 chr6:36056181-36056261 1.55e-02 80 chr5:131699157-131699237 6.05e-02 80 chr20:44884243-44884323 3.95e-06 9_[+4(5.67e-05)]_28_[+1(9.13e-05)]_\ 3_[+5(5.60e-05)]_16 chr18:12375590-12375670 5.47e-07 [+3(7.28e-05)]_56_[+4(1.44e-05)]_8 chr6:167418985-167419065 7.16e-02 80 chr16:75607178-75607258 5.13e-03 80 chr3:38199210-38199290 4.69e-02 80 chr2:10367929-10368009 7.56e-07 7_[+3(7.28e-05)]_53_[+4(1.44e-05)]_\ 4 chr5:138977548-138977628 4.80e-05 48_[+4(1.44e-05)]_24 chr6:90186129-90186209 8.21e-02 80 chr8:42534724-42534804 1.16e-07 2_[+3(1.44e-05)]_22_[+1(9.13e-05)]_\ [+4(4.24e-05)]_18_[+4(1.44e-05)]_6 chr18:12539296-12539376 8.07e-03 80 chr4:129709344-129709424 1.81e-02 80 chr17:73507962-73508042 2.16e-02 46_[+1(9.13e-05)]_26 chr1:223919294-223919374 1.22e-02 80 chr4:81018722-81018802 1.28e-02 80 chr6:49574944-49575024 9.76e-02 80 chr1:47935202-47935282 2.12e-02 80 chr1:62274748-62274828 3.96e-02 80 chr14:77414058-77414138 4.54e-02 80 chr10:135173361-13517344 2.43e-02 80 chr5:139129014-139129094 6.26e-05 11_[+5(2.80e-05)]_31_[+1(9.13e-05)]_\ 22 chr18:58756124-58756204 8.07e-02 80 chr12:56544496-56544576 3.38e-03 39_[+2(3.04e-05)]_3_[+1(9.13e-05)]_\ 22 chr10:74655154-74655234 1.26e-02 80 chr15:92012991-92013071 1.44e-03 42_[+2(6.26e-05)]_30 chr7:111842955-111843035 1.37e-02 80 chr2:57985980-57986060 1.52e-02 35_[+1(1.52e-05)]_37 chr11:59609954-59610034 4.68e-04 49_[+1(1.52e-05)]_23 chr17:73154229-73154309 5.41e-04 68_[+5(1.44e-05)]_4 chr6:67831204-67831284 3.66e-03 42_[+2(3.04e-05)]_3_[+1(4.56e-05)]_\ 19 chr1:27442882-27442962 7.91e-04 36_[+2(9.14e-05)]_36 chr2:219184837-219184917 2.53e-04 43_[+2(9.14e-05)]_12_[+3(2.88e-05)]_\ 9 chr10:13743750-13743830 3.59e-03 35_[+2(3.04e-05)]_37 chr5:81032036-81032116 4.61e-04 52_[+1(9.13e-05)]_20 chr6:27360560-27360640 1.82e-02 80 chr3:52265627-52265707 6.71e-04 18_[+5(5.60e-05)]_6_[+2(9.14e-05)]_\ 40 chr6:86310605-86310685 2.80e-03 42_[+2(3.04e-05)]_3_[+1(1.52e-05)]_\ 19 chr11:70040042-70040122 3.44e-02 80 chr10:49592780-49592860 1.52e-02 44_[+1(3.04e-05)]_28 chr19:58153936-58154016 4.12e-03 51_[+1(1.52e-05)]_21 chr1:212911073-212911153 1.56e-01 80 chr11:123105930-12310601 3.71e-04 47_[+1(3.04e-05)]_3_[+3(7.28e-05)]_\ 14 chr1:213088748-213088828 1.23e-04 17_[+2(9.14e-05)]_6_[+3(2.88e-05)]_\ 41 chr8:80872545-80872625 1.08e-02 80 chr1:46341826-46341906 1.14e-02 30_[+1(1.52e-05)]_42 chr10:127457006-12745708 1.23e-03 40_[+2(6.26e-05)]_3_[+1(4.56e-05)]_\ 21 chr15:59048298-59048378 1.36e-02 50_[+1(9.13e-05)]_22 chr2:58467862-58467942 1.86e-02 22_[+2(3.04e-05)]_50 chr1:11717887-11717967 1.67e-03 21_[+2(6.26e-05)]_3_[+1(9.13e-05)]_\ 40 chr11:50017301-50017381 5.18e-02 51_[+1(9.13e-05)]_21 chr9:90431106-90431186 2.50e-03 40_[+2(6.26e-05)]_3_[+1(1.52e-05)]_\ 21 chr17:36375498-36375578 1.11e-03 16_[+2(3.04e-05)]_3_[+1(1.52e-05)]_\ 45 chr12:4681029-4681109 5.76e-04 29_[+1(9.13e-05)]_43 chr12:66018483-66018563 7.42e-04 21_[+2(6.26e-05)]_3_[+1(3.04e-05)]_\ 40 chr17:30660373-30660453 1.33e-02 37_[+2(3.04e-05)]_35 chr20:32026428-32026508 3.63e-04 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[+4(4.24e-05)]_12 chr4:17546514-17546594 2.49e-02 80 chr15:34940233-34940313 1.18e-02 80 chr1:159851802-159851882 1.83e-05 43_[+5(2.80e-05)]_29 chr6:34158045-34158125 3.68e-03 40_[+3(2.88e-05)]_32 chr1:182299493-182299573 2.01e-02 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************