******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/MYC.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr7:39620181-39620261 1.0000 80 chr2:68452473-68452553 1.0000 80 chr3:124269414-124269494 1.0000 80 chr3:141998965-141999045 1.0000 80 chr12:56513314-56513394 1.0000 80 chrX:153991790-153991870 1.0000 80 chr17:56083963-56084043 1.0000 80 chr3:196246150-196246230 1.0000 80 chr1:246038403-246038483 1.0000 80 chr8:145800941-145801021 1.0000 80 chr2:68589291-68589371 1.0000 80 chr6:5270458-5270538 1.0000 80 chr9:140429439-140429519 1.0000 80 chr17:74502599-74502679 1.0000 80 chr1:33501802-33501882 1.0000 80 chr19:4809736-4809816 1.0000 80 chr12:53400902-53400982 1.0000 80 chr2:11919442-11919522 1.0000 80 chr6:109103648-109103728 1.0000 80 chr17:56327186-56327266 1.0000 80 chr7:116151863-116151943 1.0000 80 chr7:1781743-1781823 1.0000 80 chrX:153946245-153946325 1.0000 80 chr7:150759516-150759596 1.0000 80 chr10:94513768-94513848 1.0000 80 chr9:124041182-124041262 1.0000 80 chr19:10138534-10138614 1.0000 80 chr5:175815543-175815623 1.0000 80 chr16:85450096-85450176 1.0000 80 chr11:66095926-66096006 1.0000 80 chr7:1513832-1513912 1.0000 80 chr6:7239182-7239262 1.0000 80 chr15:66155111-66155191 1.0000 80 chr7:106750491-106750571 1.0000 80 chr19:18527262-18527342 1.0000 80 chrX:153627244-153627324 1.0000 80 chr3:185531826-185531906 1.0000 80 chr19:1672471-1672551 1.0000 80 chr21:46961690-46961770 1.0000 80 chr14:23633601-23633681 1.0000 80 chr17:74178453-74178533 1.0000 80 chr17:8152626-8152706 1.0000 80 chr17:42404328-42404408 1.0000 80 chr5:172759060-172759140 1.0000 80 chr3:48281798-48281878 1.0000 80 chr2:232328497-232328577 1.0000 80 chrX:48433181-48433261 1.0000 80 chr1:245082226-245082306 1.0000 80 chr12:131311005-13131108 1.0000 80 chr14:91884478-91884558 1.0000 80 chr5:141350044-141350124 1.0000 80 chr5:131654579-131654659 1.0000 80 chr1:76251731-76251811 1.0000 80 chr11:118851041-11885112 1.0000 80 chr2:172289957-172290037 1.0000 80 chr15:50647663-50647743 1.0000 80 chr1:21945784-21945864 1.0000 80 chr16:29721789-29721869 1.0000 80 chr3:183967342-183967422 1.0000 80 chr22:29877073-29877153 1.0000 80 chr2:85766906-85766986 1.0000 80 chr3:14165768-14165848 1.0000 80 chr7:44162893-44162973 1.0000 80 chr19:46242887-46242967 1.0000 80 chr5:142599400-142599480 1.0000 80 chr7:913129-913209 1.0000 80 chr17:39894389-39894469 1.0000 80 chr2:113357767-113357847 1.0000 80 chr19:1045110-1045190 1.0000 80 chr22:29949826-29949906 1.0000 80 chr5:132369241-132369321 1.0000 80 chr1:110162306-110162386 1.0000 80 chr1:38273423-38273503 1.0000 80 chr21:36012923-36013003 1.0000 80 chr11:32469940-32470020 1.0000 80 chr7:105924487-105924567 1.0000 80 chr8:99129441-99129521 1.0000 80 chr2:75062131-75062211 1.0000 80 chr16:81538723-81538803 1.0000 80 chr12:112074446-11207452 1.0000 80 chr17:17109782-17109862 1.0000 80 chr17:38269607-38269687 1.0000 80 chr12:54674083-54674163 1.0000 80 chr7:157180024-157180104 1.0000 80 chr17:34958009-34958089 1.0000 80 chr19:12834734-12834814 1.0000 80 chr9:130797613-130797693 1.0000 80 chr8:103425158-103425238 1.0000 80 chr1:204488258-204488338 1.0000 80 chr20:30135177-30135257 1.0000 80 chr1:32879668-32879748 1.0000 80 chr12:117125864-11712594 1.0000 80 chr10:99161026-99161106 1.0000 80 chr1:153483551-153483631 1.0000 80 chr3:47913044-47913124 1.0000 80 chr22:37957911-37957991 1.0000 80 chr17:17208924-17209004 1.0000 80 chr1:155243329-155243409 1.0000 80 chr2:99081471-99081551 1.0000 80 chr20:39657105-39657185 1.0000 80 chr7:130581899-130581979 1.0000 80 chr12:120763380-12076346 1.0000 80 chr19:2739212-2739292 1.0000 80 chr17:33307435-33307515 1.0000 80 chr17:34890808-34890888 1.0000 80 chr15:41407838-41407918 1.0000 80 chr5:170815558-170815638 1.0000 80 chr19:1864246-1864326 1.0000 80 chr22:19930016-19930096 1.0000 80 chr19:10989982-10990062 1.0000 80 chr22:21123402-21123482 1.0000 80 chr16:75267917-75267997 1.0000 80 chr2:171181219-171181299 1.0000 80 chr1:205600379-205600459 1.0000 80 chrX:129728528-129728608 1.0000 80 chr1:156308395-156308475 1.0000 80 chr15:68522397-68522477 1.0000 80 chr16:85654150-85654230 1.0000 80 chr17:38256933-38257013 1.0000 80 chr13:76123527-76123607 1.0000 80 chr5:176817568-176817648 1.0000 80 chr7:105162625-105162705 1.0000 80 chr9:130565278-130565358 1.0000 80 chr15:34730050-34730130 1.0000 80 chr10:11916876-11916956 1.0000 80 chr5:172447362-172447442 1.0000 80 chr15:81558330-81558410 1.0000 80 chr3:183851940-183852020 1.0000 80 chr3:167814083-167814163 1.0000 80 chr16:88848342-88848422 1.0000 80 chr11:34074971-34075051 1.0000 80 chr8:55047754-55047834 1.0000 80 chr10:76995312-76995392 1.0000 80 chr1:11120232-11120312 1.0000 80 chr19:4815788-4815868 1.0000 80 chr10:104210268-10421034 1.0000 80 chr2:203815473-203815553 1.0000 80 chr1:165798226-165798306 1.0000 80 chr11:64653135-64653215 1.0000 80 chr2:203776323-203776403 1.0000 80 chr9:101338025-101338105 1.0000 80 chr1:2130681-2130761 1.0000 80 chr10:71094383-71094463 1.0000 80 chr10:102747302-10274738 1.0000 80 chr1:43148661-43148741 1.0000 80 chr15:75497224-75497304 1.0000 80 chr19:1592292-1592372 1.0000 80 chr7:75987585-75987665 1.0000 80 chr2:10588857-10588937 1.0000 80 chr9:37485903-37485983 1.0000 80 chr16:53584028-53584108 1.0000 80 chr3:45079380-45079460 1.0000 80 chr12:64615985-64616065 1.0000 80 chr16:8159649-8159729 1.0000 80 chr3:155052733-155052813 1.0000 80 chr19:58331061-58331141 1.0000 80 chr6:53275606-53275686 1.0000 80 chr3:16361014-16361094 1.0000 80 chr17:7475838-7475918 1.0000 80 chr19:41257112-41257192 1.0000 80 chr17:72957005-72957085 1.0000 80 chr19:33162868-33162948 1.0000 80 chr3:13460581-13460661 1.0000 80 chr9:140171519-140171599 1.0000 80 chr11:46579509-46579589 1.0000 80 chr17:5342386-5342466 1.0000 80 chr9:131084751-131084831 1.0000 80 chr6:15264395-15264475 1.0000 80 chr10:81918466-81918546 1.0000 80 chr18:9073750-9073830 1.0000 80 chr5:90628222-90628302 1.0000 80 chr4:57302524-57302604 1.0000 80 chr16:66550841-66550921 1.0000 80 chr3:58147645-58147725 1.0000 80 chr5:138609797-138609877 1.0000 80 chr12:122236268-12223634 1.0000 80 chr14:35342720-35342800 1.0000 80 chr1:6454158-6454238 1.0000 80 chr9:101595730-101595810 1.0000 80 chr16:4524670-4524750 1.0000 80 chr10:30703076-30703156 1.0000 80 chr20:43589173-43589253 1.0000 80 chr2:27315639-27315719 1.0000 80 chr4:54232191-54232271 1.0000 80 chr19:7968550-7968630 1.0000 80 chr10:44101846-44101926 1.0000 80 chr5:158636743-158636823 1.0000 80 chr10:103912419-10391249 1.0000 80 chr16:11945337-11945417 1.0000 80 chrX:106920145-106920225 1.0000 80 chr8:68167968-68168048 1.0000 80 chr1:245026247-245026327 1.0000 80 chr6:111303230-111303310 1.0000 80 chr2:27440292-27440372 1.0000 80 chr8:10697386-10697466 1.0000 80 chr1:156783727-156783807 1.0000 80 chr11:123612320-12361240 1.0000 80 chr17:33469298-33469378 1.0000 80 chr16:83986653-83986733 1.0000 80 chr17:62084180-62084260 1.0000 80 chr6:42182648-42182728 1.0000 80 chr16:30418594-30418674 1.0000 80 chr15:91084202-91084282 1.0000 80 chr13:27998774-27998854 1.0000 80 chr9:117247298-117247378 1.0000 80 chr3:156271905-156271985 1.0000 80 chr7:66843331-66843411 1.0000 80 chr1:118472362-118472442 1.0000 80 chr7:116657123-116657203 1.0000 80 chr19:41168847-41168927 1.0000 80 chr15:80145989-80146069 1.0000 80 chr2:177796790-177796870 1.0000 80 chr20:305086-305166 1.0000 80 chr22:31460090-31460170 1.0000 80 chr9:96928106-96928186 1.0000 80 chr8:37888478-37888558 1.0000 80 chr17:81009532-81009612 1.0000 80 chr6:105406797-105406877 1.0000 80 chr12:7074416-7074496 1.0000 80 chr19:4328700-4328780 1.0000 80 chr17:57784740-57784820 1.0000 80 chr17:36908724-36908804 1.0000 80 chr20:50211682-50211762 1.0000 80 chr1:18081788-18081868 1.0000 80 chr1:200639589-200639669 1.0000 80 chr2:128458262-128458342 1.0000 80 chr5:61699622-61699702 1.0000 80 chr22:45710063-45710143 1.0000 80 chr19:39339981-39340061 1.0000 80 chr22:38662246-38662326 1.0000 80 chr1:111991844-111991924 1.0000 80 chrX:130964584-130964664 1.0000 80 chr6:30585713-30585793 1.0000 80 chr1:210001285-210001365 1.0000 80 chr19:56151532-56151612 1.0000 80 chr5:176739268-176739348 1.0000 80 chr12:131356325-13135640 1.0000 80 chr5:33441322-33441402 1.0000 80 chr17:40463655-40463735 1.0000 80 chr7:105697529-105697609 1.0000 80 chr6:35466362-35466442 1.0000 80 chr1:229761929-229762009 1.0000 80 chr19:41903220-41903300 1.0000 80 chr12:110907060-11090714 1.0000 80 chr16:58549318-58549398 1.0000 80 chr6:160403046-160403126 1.0000 80 chr19:55987556-55987636 1.0000 80 chr2:74369664-74369744 1.0000 80 chr19:14529112-14529192 1.0000 80 chr17:34965371-34965451 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_MYC/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/MYC.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.201 C 0.299 G 0.304 T 0.196 Background letter frequencies (from file dataset with add-one prior applied): A 0.201 C 0.299 G 0.304 T 0.196 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCACGTGS MEME-1 width = 8 sites = 228 llr = 1651 E-value = 1.9e-233 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 2:9:1::: pos.-specific C 6a:9:::3 probability G 2:::9:a5 matrix T :::1:9:1 bits 2.3 2.1 1.9 * * 1.6 ** ** Relative 1.4 ** ** Entropy 1.2 ****** (10.4 bits) 0.9 ****** 0.7 ****** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCACGTGG consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:58549318-58549398 36 2.96e-05 AAAACAGGCA CCACGTGG TTCCGGCGCC chr1:229761929-229762009 41 2.96e-05 GGTACCGGTC CCACGTGG TGGGGACGCG chr6:35466362-35466442 49 2.96e-05 CACACCAGCA CCACGTGG CTTTGCAGTC chr19:56151532-56151612 8 2.96e-05 CGTGGCG CCACGTGG CTGGAGGAGG chr1:111991844-111991924 18 2.96e-05 GCAGCAAACC CCACGTGG TGCACCTCTG chr5:61699622-61699702 48 2.96e-05 GAGAAAGCCA CCACGTGG GGATCGCCGC chr19:41168847-41168927 29 2.96e-05 CTCCCGGCAA CCACGTGG CCCCACAGGT chr17:33469298-33469378 6 2.96e-05 CGTCC CCACGTGG AGGAGAAAGA chr1:156783727-156783807 23 2.96e-05 TCGCCCAGCA CCACGTGG CGCCCGTCCC chr2:27440292-27440372 26 2.96e-05 GCGCCGTTAG CCACGTGG ACCGACTCCG chr16:66550841-66550921 19 2.96e-05 ATCTGGACAT CCACGTGG GTCTCTGGCC chr5:90628222-90628302 42 2.96e-05 tcagttaagg ccacgtgg tcagtgctaa chr11:46579509-46579589 50 2.96e-05 GAGAGAGAAG CCACGTGG AAGACTATca chr17:72957005-72957085 8 2.96e-05 AACTCTG CCACGTGG CACGTGTGAC chr12:64615985-64616065 55 2.96e-05 CCAGCTCGAC CCACGTGG CTCTCCTCGG chr10:71094383-71094463 42 2.96e-05 CCAGGAGCCA CCACGTGG TGCCTCCTAG chr1:11120232-11120312 36 2.96e-05 GCTCCAGGGG CCACGTGg ggcccggccg chr10:76995312-76995392 3 2.96e-05 AG CCACGTGG GACCCGCAGG chr8:55047754-55047834 34 2.96e-05 GCCCCCGAGA CCACGTGG CCTCCGAGCA chr16:88848342-88848422 43 2.96e-05 TATTGTCAGC CCACGTGG GTGTCCCACA chr3:183851940-183852020 22 2.96e-05 GTCGGAATCG CCACGTGG AAACAGCTCT chr10:11916876-11916956 43 2.96e-05 GAACCCAGCT CCACGTGG CCTACCTCCC chr5:176817568-176817648 46 2.96e-05 GTGACCATAG CCACGTGG AGACGACTCC chr22:21123402-21123482 23 2.96e-05 AACAGTAGCT CCACGTGG CTGGGAAGTT chr22:19930016-19930096 21 2.96e-05 GTGTGCAGGA CCACGTGG GAATGTTAGA chr5:170815558-170815638 30 2.96e-05 CACGTGGTTG CCACGTGG TTGGGGGAGG chr17:33307435-33307515 23 2.96e-05 CAACTACGAC CCACGTGG CAGACGGGGG chr7:130581899-130581979 61 2.96e-05 GCGCTCACCA CCACGTGG GCAGAGCCAC chr20:39657105-39657185 37 2.96e-05 TAAAGGCCCA CCACGTGG CTGCGCGGCC chr1:153483551-153483631 71 2.96e-05 CGGTCTCCTG CCACGTGG AG chr10:99161026-99161106 33 2.96e-05 CGCTCAGAAC CCACGTGG ATACCCTGTA chr17:34958009-34958089 22 2.96e-05 AGCGAGGGAC CCACGTGG GAGCCTGGGA chr17:38269607-38269687 59 2.96e-05 GAAGGGAGGT CCACGTGG AGTGGGCGGA chr12:112074446-11207452 2 2.96e-05 G CCACGTGG CTCCTCTCTT chr8:99129441-99129521 51 2.96e-05 ACGCTCCAGG CCACGTGG AGGAAGCGCC chr21:36012923-36013003 53 2.96e-05 ttctcaggct ccacgtgg tgacgagatg chr17:39894389-39894469 60 2.96e-05 GTATACCTCC CCACGTGg cttcctcacc chrX:48433181-48433261 50 2.96e-05 TTTCCTTATC CCACGTGG CCGCCGCCAT chr14:23633601-23633681 11 2.96e-05 cccttgcact ccacgtgg cctgcctccc chr16:85450096-85450176 23 2.96e-05 GCAGCCCCTG CCACGTGG GATGCGGTGT chr19:10138534-10138614 56 2.96e-05 GTACGAGAGG CCACGTGG ACTTGCGCAC chr7:150759516-150759596 36 2.96e-05 CTCCCTGCCC CCACGTGG CCACCGCTCC chr17:56327186-56327266 49 2.96e-05 CGGAGCCCGG CCACGTGG CGGTCACGTT chr2:11919442-11919522 7 2.96e-05 GGCGAC CCACGTGG AGCGCCTTCC chr19:4809736-4809816 12 2.96e-05 GCTTTCGTGG CCACGTGG GGCCGGCGGG chr17:74502599-74502679 58 2.96e-05 GCCAAGGAAT CCACGTGG TCAGGGGAAC chr9:140429439-140429519 61 2.96e-05 gcaagagaga ccacgtgg cccataaagc chrX:153991790-153991870 10 2.96e-05 CTGCCATAG CCACGTGG TGAACCGGAA chr19:41903220-41903300 24 5.87e-05 CGCGCCGAGC CCACGTGC GGCTGCAGTT chr1:210001285-210001365 45 5.87e-05 GTCAGCGAGC CCACGTGC TTGTGTTGAC chr1:18081788-18081868 58 5.87e-05 ggctgcggca ccacgtgc agccgctctc chr17:36908724-36908804 31 5.87e-05 TTTCACCAGC CCACGTGC GCGCAGGCTC chr3:156271905-156271985 11 5.87e-05 TTCCAAAATG CCACGTGC AGCCCCAAAC chr17:62084180-62084260 22 5.87e-05 CTTTGGGAAG CCACGTGC ACCAGCTCGT chr4:57302524-57302604 32 5.87e-05 GAGCTCGCGG CCACGTGC GAGCCGCGAA chr3:16361014-16361094 49 5.87e-05 GACAATTCCA CCACGTGC TAGACCTTCC chr19:1864246-1864326 21 5.87e-05 CGCCCCCAGG CCACGTGC GCGACCCTTC chr15:41407838-41407918 28 5.87e-05 CCACCGGGTC CCACGTGC ACCTGGTCTA chr2:99081471-99081551 31 5.87e-05 cgagttccta ccacgtgc cagatagcgt chr1:155243329-155243409 32 5.87e-05 GCGCGCGCCA CCACGTGC TCACGTAGTT chr3:47913044-47913124 55 5.87e-05 CCCATGAGCA CCACGTGC TAGGTGCTGT chr17:17109782-17109862 44 5.87e-05 acgtgccagg ccacgtgc caggccacgc chr19:1045110-1045190 55 5.87e-05 TGGGCCCCGG CCACGTGC GCATCAAAAT chr11:118851041-11885112 1 5.87e-05 . CCACGTGC TCAGTTAGCA chr14:91884478-91884558 42 5.87e-05 GGCCCGAGCG CCACGTGC GAGCTGGGGT chr12:131311005-13131108 44 5.87e-05 CACGCGGAGG CCACGTGC ACAGCTCCAC chr1:245082226-245082306 2 5.87e-05 G CCACGTGC GCGCGGGGGC chr2:232328497-232328577 8 5.87e-05 TAGGCCA CCACGTGC CCGAAACACA chr19:1672471-1672551 51 5.87e-05 CGGGCGCTCC CCACGTGC GCGCTCACAC chr3:185531826-185531906 54 5.87e-05 CCAGTCTTTG CCACGTGC TCTGGAAGTA chrX:153627244-153627324 70 5.87e-05 GGATTTAGTG CCACGTGC CCG chr19:18527262-18527342 15 5.87e-05 cacgctgcca ccacgtgc ggcCTCCCAT chr20:305086-305166 48 7.86e-05 GAACTGGCTC ACACGTGG TGAGCCGGGA chr11:123612320-12361240 45 7.86e-05 GCGGGTCGGA ACACGTGG GGCCTTTGCG chr4:54232191-54232271 21 7.86e-05 TCTCCACAGT ACACGTGG TCGGCCTCTG chr2:27315639-27315719 43 7.86e-05 GCAGTTAGGG ACACGTGG TACCCATCCT chr18:9073750-9073830 73 7.86e-05 CTGTTTACTG ACACGTGG chr16:8159649-8159729 46 7.86e-05 tctttattgt acacgtgg ctgacaaaga chr16:75267917-75267997 70 7.86e-05 acacactagc acacgtgg aca chr12:120763380-12076346 6 7.86e-05 AAATG ACACGTGG ATAGTTGCTG chr17:17208924-17209004 67 7.86e-05 CCTGTACTGC ACACGTGG GATTTA chr7:913129-913209 70 7.86e-05 AGCGTGTTGA ACACGTGG CTC chr3:14165768-14165848 9 7.86e-05 AAATGTAA ACACGTGG GGTATGGCAG chr3:48281798-48281878 7 7.86e-05 ttctac acacgtgg gaatatgtgg chr5:172759060-172759140 65 7.86e-05 AACATGGCTT ACACGTGG GGAGctcc chr2:68589291-68589371 36 7.86e-05 AGGCGCGATG ACACGTGG CAGGAGGGGG chr8:145800941-145801021 31 7.86e-05 agaaagcaac acacgtgg agccatcacc chr12:56513314-56513394 45 7.86e-05 GGGAGGTCAG ACACGTGG TAGCAGGGAC chr17:34965371-34965451 27 1.09e-04 acaTCACTCA GCACGTGG GAGATTCTGG chr19:55987556-55987636 32 1.09e-04 AAAATCCTGA GCACGTGG CTCTACCGAG chr5:176739268-176739348 8 1.09e-04 AGCCGCT GCACGTGG GTgccgcggg chr13:27998774-27998854 56 1.09e-04 ACGTGTCTCG GCACGTGG CAGCGCGCCT chr16:30418594-30418674 12 1.09e-04 GGGCGGGAGC GCACGTGG CCTATTTCGG chr9:140171519-140171599 50 1.09e-04 ACCCTGAGCC GCACGTGG TTTTTTCCGT chr3:167814083-167814163 6 1.09e-04 GGAAC GCACGTGG AGAGCGGAGT chr15:68522397-68522477 65 1.09e-04 GCGTGGTGCA GCACGTGG GTTGCAGA chr17:34890808-34890888 24 1.09e-04 CGCGGGGCGC GCACGTGG CTTGGCCGGG chr2:75062131-75062211 16 1.09e-04 TCCGGCGAGA GCACGTGG AGAGAATCGT chr16:29721789-29721869 32 1.09e-04 tctctggtga gcacgtgg tatttctaag chr17:42404328-42404408 41 1.09e-04 TGCCGGGTTA GCACGTGG ACTCCGAGGG chr11:66095926-66096006 8 1.09e-04 GGACCCT GCACGTGG CCAGGAATGA chr6:109103648-109103728 48 1.09e-04 AGGGACGCCC GCACGTGG CGTTCTGCGG chr3:196246150-196246230 34 1.09e-04 CCTCGTGCGa gcacgtgg tatatttaag chr3:141998965-141999045 34 1.09e-04 gagctggaga gcacgtgg cattttaagg chr19:14529112-14529192 60 1.28e-04 CCCAGACACG CCACGTGT ACCCAGTTAC chr1:200639589-200639669 68 1.28e-04 ACCTCTGGAG CCACGTGT CCCAA chr1:245026247-245026327 46 1.28e-04 GGCCCGAAGC CCACGTGT ATCCCGAAGA chr10:81918466-81918546 15 1.28e-04 AAAAATCTTT CCACGTGT TTCCATCACA chr1:2130681-2130761 47 1.28e-04 TCCTCCATCC CCACGTGT CGGGCTCAGC chr15:81558330-81558410 46 1.28e-04 GCAACTGCTG CCACGTGT GTGCTATTAa chr1:204488258-204488338 44 1.28e-04 aggggataga ccacgTGT TTATCTTTAC chr2:85766906-85766986 24 1.28e-04 GCAGCGGCGA CCACGTGT TTGCCGCATG chr3:183967342-183967422 20 1.28e-04 GACGGAAGTT CCACGTGT TTGTGTTGAG chr1:33501802-33501882 48 1.28e-04 TCACTCTGCC CCACGTGT TGGAGATGCT chr22:38662246-38662326 13 1.47e-04 AGCAACAGGC ACACGTGC TTCCACGTTT chr5:158636743-158636823 60 1.47e-04 CCATTCTGAC ACACGTGC TCTCTCACTC chr12:122236268-12223634 8 1.47e-04 GGCAGGG ACACGTGC TTCAGCAGGT chr5:138609797-138609877 44 1.47e-04 GGAGCTCCGA ACACGTGC GCGTGAGTAA chr17:5342386-5342466 25 1.47e-04 ACGACTGCGA ACACGTGC AGATGCAAAG chr7:105162625-105162705 59 1.47e-04 CCGGGCTCGC ACACGTGC GGCGCAGCGA chr19:12834734-12834814 30 1.47e-04 GGGCTGAGAA ACACGTGC AGAAAGCCGC chr12:54674083-54674163 24 1.47e-04 CCATTTTACT ACACGTGC GGTCAACAAG chr21:46961690-46961770 32 1.47e-04 TCCCGAAGCA ACACGTGC CTGGGCGCGA chr7:1513832-1513912 34 1.47e-04 TCGCTGCGGA ACACGTGC GGCTGCAGCA chr9:117247298-117247378 46 1.96e-04 GTGCTGAGGA GCACGTGC AACAGAGGTA chr15:91084202-91084282 8 1.96e-04 gtggcta ccacatgg ctcagtgcag chr6:111303230-111303310 36 1.96e-04 ATCGCCGAGG GCACGTGC ATGCCCCCTG chr10:30703076-30703156 34 1.96e-04 tctattatgg ccacatgg agtcactgtt chr16:4524670-4524750 38 1.96e-04 CCCGCCCCAG GCACGTGC ACAGTGAGTT chr16:53584028-53584108 49 1.96e-04 TACGATCCCA GCACGTGC GTTGGGGGTT chr15:34730050-34730130 7 1.96e-04 GCCGCG CCACATGG CGCACGCGCA chr12:117125864-11712594 44 1.96e-04 CCTAGGGAAA GCACGTGC AAAAGCAGGG chr9:130797613-130797693 56 1.96e-04 GAACAACATG CCACATGG CTTCAAGCCC chr7:157180024-157180104 24 1.96e-04 TGCAGCCATG GCACGTGC GGGAAAGCGG chr19:46242887-46242967 52 1.96e-04 cccctccgaa ccacatgg actgagaatg chr1:21945784-21945864 18 1.96e-04 CTGCGGGAAC GCACGTGC CGCTGGGAGT chr5:131654579-131654659 38 1.96e-04 TGTTTCACTG CCACATGG AAAGCTCATG chr5:141350044-141350124 65 1.96e-04 ACTCCTTTAA CCACATGG CTCAGTTA chr17:74178453-74178533 38 1.96e-04 CCAGAAGGGT GCACGTGC ATTCACATAC chr9:124041182-124041262 40 1.96e-04 ATGTGTGTGT GCACGTGC ACGTATGTGT chr2:68452473-68452553 18 1.96e-04 agtggagagg ccacatgg cattgaatgc chr22:45710063-45710143 4 2.16e-04 CCT CCATGTGG CCCTCCTTAT chr7:116657123-116657203 18 2.16e-04 ttcaggctaa ccatgtgg ttttttcagg chr9:101595730-101595810 59 2.16e-04 gtgctgcgtg ccatgtgg tgagggccct chr6:53275606-53275686 20 2.16e-04 acccctgtga ccatgtgg ttggctggga chr2:171181219-171181299 13 2.16e-04 ttcttctttg ccatgtgg cagatattaa chr9:96928106-96928186 46 2.48e-04 TCCGGGTCGC GCACGTGT AAATTGCCCC chr1:6454158-6454238 41 2.48e-04 GCCTGGAGGT GCACGTGT TGCAGTGAGG chr17:7475838-7475918 10 2.48e-04 GTCGCCTCC GCACGTGT GAGAGTGCAG chr2:203815473-203815553 49 2.48e-04 TATGAACTGA GCACGTGT AAGCAGTTGT chr8:103425158-103425238 32 2.48e-04 GTTCCGGAGA GCACGTGT TAGGGAAGGA chr3:124269414-124269494 15 2.48e-04 AGGAACCCAA GCACGTGT TTCCTTTAGA chr7:39620181-39620261 44 2.48e-04 TGATAAGTTA GCACGTGT TTCATTCCTT chr8:37888478-37888558 33 2.67e-04 TCCAGGACAG CCACATGC CGAGCTGTGC chr14:35342720-35342800 44 2.67e-04 GTCAGGCAGC CCACATGC GCAGGGGGAT chr17:56083963-56084043 32 2.67e-04 GTGGAAGAGC CCACATGC GCCGCATAAT chr15:80145989-80146069 9 2.86e-04 AGCCCAAA CCATGTGC AAGGGTGGGC chr3:58147645-58147725 62 2.86e-04 taaagaaatg ccatgtgc tcattgacta chr19:10989982-10990062 64 2.86e-04 atctgagcgg ccatgtgc tcagctgaa chr22:37957911-37957991 64 2.86e-04 TGAGCTCAGG CCATGTGC CCAGGCCCT chr5:132369241-132369321 26 2.86e-04 GAAGAGAGCG CCATGTGC TTGGTCACAT chr15:50647663-50647743 25 2.86e-04 CTGCGGACGG CCATGTGC GCGGCGGAGA chr7:106750491-106750571 46 2.86e-04 gagagataat ccatgtgc ttgggagaca chr10:94513768-94513848 40 2.86e-04 GGAGATAAGG CCATGTGc tttctgggcc chr7:116151863-116151943 31 2.86e-04 TCTGCTGGAA CCATGTGC CCTAAAGACA chr3:13460581-13460661 23 3.00e-04 CCAGGCTTAC ACACATGG CTGTCACGTG chr19:2739212-2739292 12 3.00e-04 CGCTGGCTGA ACACATGG ACGAGGGGAA chr20:50211682-50211762 67 3.32e-04 AGGAGTGTCC GCACATGG ACGGAA chr6:105406797-105406877 34 3.32e-04 ACTCAAAAAA ACATGTGG CCAGAGGCGG chr9:101338025-101338105 37 3.32e-04 ttgCACCAGA GCACATGg ctgcttttct chr11:34074971-34075051 27 3.32e-04 GGGACTCGGG GCACATGG AGAGAGCGTC chr1:32879668-32879748 41 3.32e-04 ggtctagaga gcacatgg cgtttcaagg chr5:142599400-142599480 19 3.32e-04 ggGTTCCGAA GCACATGG TCTGGCACAT chr2:172289957-172290037 50 3.32e-04 GCGGTGGGAC ACATGTGG TGCAAGCTTG chr15:66155111-66155191 62 3.32e-04 ATATACAGAG GCACATGG TGGGGGTGTG chr2:177796790-177796870 54 3.65e-04 GAAATGGTGG CCACATGT TGTTTCAAAC chrX:129728528-129728608 47 3.65e-04 GTCACCAGCA CCACATGT GACCTGCTTG chr22:29949826-29949906 21 3.90e-04 AAAAACAAAG ACACATGC Ttctcgttca chrX:106920145-106920225 22 4.23e-04 GCGTGGGGCG ACATGTGC TGCCGGTCAC chr3:155052733-155052813 25 4.23e-04 GCCAAGTCTG ACATGTGC TGCTTCTCCT chr16:81538723-81538803 23 4.23e-04 gcccgtctca acatgtgc ttctgctgtc chr6:5270458-5270538 51 4.23e-04 TGAGACAAGC ACATGTGC CTGGGCATTC chr7:105697529-105697609 69 4.84e-04 ACTGTGGACC GCATGTGC GGTG chr1:118472362-118472442 28 4.84e-04 CGGCTGGGAG CCTCGTGG AGGCTGAGGT chr10:102747302-10274738 20 4.84e-04 AAGGCGAGTA GCATGTGC GGGAGACTCA chr19:58331061-58331141 45 5.11e-04 CTTGTAGCGG CCACGTTG ATCTGCGATA chr12:7074416-7074496 35 5.78e-04 ACCCAGGAGC GCACATGT GAACGTGCGC chr8:68167968-68168048 70 5.78e-04 AGGACTCCAA GCACATGT TCT chr6:15264395-15264475 37 5.78e-04 TTCTGTAGGA GCACATGT CTTGGTGTGG chr10:104210268-10421034 39 5.78e-04 ACGCGCCACT CCACGCGG TGGTCGGGCT chr13:76123527-76123607 65 5.78e-04 GTGCGGGTGA CCACGCGG TCCCAGAC chr16:85654150-85654230 28 5.78e-04 GGCTGCCGAT CCACGCGG TCGTCTCTGC chr11:32469940-32470020 65 5.78e-04 AAACCGCAAA GCACATGT CTTTTAGA chr1:38273423-38273503 54 5.78e-04 TAGACGTCGG CCACGCGG CCGAGGCATA chr22:29877073-29877153 18 5.78e-04 AGCTTGAAGG CCACGCGG TGCAGAGCAC chrX:153946245-153946325 46 5.90e-04 CCATGCGGTA GCATGTGT GACAGCAGGA chr5:33441322-33441402 32 6.96e-04 GCGGCCGGGA CCGCGTGG GTCGGAGAAG chr10:44101846-44101926 36 6.96e-04 CAGCCTGTCT CCGCGTGG TGCGAGCGCT chr2:10588857-10588937 29 6.96e-04 GCGTTCAGTA CCTCGTGC CCGAGAGCGG chr1:43148661-43148741 32 6.96e-04 CGCCGACCGG CCTCGTGC GCTCGGGCCC chr17:38256933-38257013 36 6.96e-04 CCAGGGAGCG CCTCGTGC CCCAGTGACA chr20:30135177-30135257 34 6.96e-04 GTCTGGCAGG CCGCGTGG CGCCCGCGCC chr2:113357767-113357847 55 6.96e-04 GCAGCTGCTT CCACGTGA GGCCTCCGGC chr17:8152626-8152706 28 6.96e-04 AGTGCATCTT CCACGTGA GTATAGTTAC chr19:33162868-33162948 14 7.42e-04 CAGCGTGCAC ACTCGTGG TTTTGTGGTC chr1:76251731-76251811 12 8.29e-04 TATGGGACAA GCATATGG TCGCAGGACT chr7:105924487-105924567 40 8.69e-04 TCCTTTAAAT CCTCGTGT TTCATTTTCC chr5:175815543-175815623 49 8.69e-04 GTCTCTCAGA CCTCGTGT AACAAACTCC chr12:110907060-11090714 29 9.93e-04 CGACAGTCGC CCGCGTGC ATCTCTCTGC chr19:39339981-39340061 65 9.93e-04 ACCGGCCGGG CCGCGTGC CCGGCCCC chr19:7968550-7968630 52 9.93e-04 GGCGGGGGTT GCACGTTG CCTGCCTCGA chr1:165798226-165798306 35 9.93e-04 GAGGAAAGAG CCACGAGG TTTTAGCTCC chr12:131356325-13135640 38 1.07e-03 GGGCGTCGGC GCACGCGG TCCCCACCGG chr8:10697386-10697466 45 1.07e-03 CGCTCCTCGA GCACGCGG CGGCGAGGGG chr19:41257112-41257192 2 1.07e-03 C GCACGCGG GCTGGAGAAG chr9:130565278-130565358 23 1.30e-03 CGGGGCTTGA GCGCGTGG CCGGTGCCGC chr9:37485903-37485983 72 1.36e-03 GCCTGGGCTC CCGCGTGT T chr6:160403046-160403126 44 1.57e-03 TGTGTCAAAC TCACGTGC TTCCCCAGCC chr19:1592292-1592372 56 1.57e-03 AACAAGCGGC GCACGCGC ACTGGGCCTc chr7:75987585-75987665 60 1.68e-03 GGAACCGCAT CCATGCGG TCCCCCGCCC chr17:57784740-57784820 42 1.82e-03 TGGGCAGCGA ACACGTTT CTATCGCGTG chr15:75497224-75497304 33 1.82e-03 GATCCAGGCT CCTCATGC TCTGGGACCT chr2:203776323-203776403 54 1.82e-03 TCTGCAGAAA GCACGAGG TTGCCCTTCT chr2:74369664-74369744 67 2.10e-03 CAGGGTTACC ACTTGTGG GCAGGA chr9:131084751-131084831 21 2.10e-03 ACGGGCGCCG CCATGTTC CACAGCCGGA chr16:11945337-11945417 55 2.22e-03 TCGTGAAGAG GCGCGTGT GCAACCCCAC chr6:42182648-42182728 10 2.48e-03 ACAACGAAC CCACATTT CCAAATCCTT chr16:83986653-83986733 34 2.48e-03 TTAAGGCTGG CCATGAGG CAGGCAGCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:58549318-58549398 3e-05 35_[+1]_37 chr1:229761929-229762009 3e-05 40_[+1]_32 chr6:35466362-35466442 3e-05 48_[+1]_24 chr19:56151532-56151612 3e-05 7_[+1]_65 chr1:111991844-111991924 3e-05 17_[+1]_55 chr5:61699622-61699702 3e-05 47_[+1]_25 chr19:41168847-41168927 3e-05 28_[+1]_44 chr17:33469298-33469378 3e-05 5_[+1]_67 chr1:156783727-156783807 3e-05 22_[+1]_50 chr2:27440292-27440372 3e-05 25_[+1]_47 chr16:66550841-66550921 3e-05 18_[+1]_54 chr5:90628222-90628302 3e-05 41_[+1]_31 chr11:46579509-46579589 3e-05 49_[+1]_23 chr17:72957005-72957085 3e-05 7_[+1]_65 chr12:64615985-64616065 3e-05 54_[+1]_18 chr10:71094383-71094463 3e-05 41_[+1]_31 chr1:11120232-11120312 3e-05 35_[+1]_37 chr10:76995312-76995392 3e-05 2_[+1]_70 chr8:55047754-55047834 3e-05 33_[+1]_39 chr16:88848342-88848422 3e-05 42_[+1]_30 chr3:183851940-183852020 3e-05 21_[+1]_51 chr10:11916876-11916956 3e-05 42_[+1]_30 chr5:176817568-176817648 3e-05 45_[+1]_27 chr22:21123402-21123482 3e-05 22_[+1]_50 chr22:19930016-19930096 3e-05 20_[+1]_52 chr5:170815558-170815638 3e-05 29_[+1]_43 chr17:33307435-33307515 3e-05 22_[+1]_50 chr7:130581899-130581979 3e-05 60_[+1]_12 chr20:39657105-39657185 3e-05 36_[+1]_36 chr1:153483551-153483631 3e-05 70_[+1]_2 chr10:99161026-99161106 3e-05 32_[+1]_40 chr17:34958009-34958089 3e-05 21_[+1]_51 chr17:38269607-38269687 3e-05 58_[+1]_14 chr12:112074446-11207452 3e-05 1_[+1]_71 chr8:99129441-99129521 3e-05 50_[+1]_22 chr21:36012923-36013003 3e-05 52_[+1]_20 chr17:39894389-39894469 3e-05 59_[+1]_13 chrX:48433181-48433261 3e-05 49_[+1]_23 chr14:23633601-23633681 3e-05 10_[+1]_62 chr16:85450096-85450176 3e-05 22_[+1]_50 chr19:10138534-10138614 3e-05 55_[+1]_17 chr7:150759516-150759596 3e-05 35_[+1]_37 chr17:56327186-56327266 3e-05 48_[+1]_24 chr2:11919442-11919522 3e-05 6_[+1]_66 chr19:4809736-4809816 3e-05 11_[+1]_61 chr17:74502599-74502679 3e-05 57_[+1]_15 chr9:140429439-140429519 3e-05 60_[+1]_12 chrX:153991790-153991870 3e-05 9_[+1]_63 chr19:41903220-41903300 5.9e-05 23_[+1]_49 chr1:210001285-210001365 5.9e-05 44_[+1]_28 chr1:18081788-18081868 5.9e-05 57_[+1]_15 chr17:36908724-36908804 5.9e-05 30_[+1]_42 chr3:156271905-156271985 5.9e-05 10_[+1]_62 chr17:62084180-62084260 5.9e-05 21_[+1]_51 chr4:57302524-57302604 5.9e-05 31_[+1]_41 chr3:16361014-16361094 5.9e-05 48_[+1]_24 chr19:1864246-1864326 5.9e-05 20_[+1]_52 chr15:41407838-41407918 5.9e-05 27_[+1]_45 chr2:99081471-99081551 5.9e-05 30_[+1]_42 chr1:155243329-155243409 5.9e-05 31_[+1]_41 chr3:47913044-47913124 5.9e-05 54_[+1]_18 chr17:17109782-17109862 5.9e-05 43_[+1]_29 chr19:1045110-1045190 5.9e-05 54_[+1]_18 chr11:118851041-11885112 5.9e-05 [+1]_72 chr14:91884478-91884558 5.9e-05 41_[+1]_31 chr12:131311005-13131108 5.9e-05 43_[+1]_29 chr1:245082226-245082306 5.9e-05 1_[+1]_71 chr2:232328497-232328577 5.9e-05 7_[+1]_65 chr19:1672471-1672551 5.9e-05 50_[+1]_22 chr3:185531826-185531906 5.9e-05 53_[+1]_19 chrX:153627244-153627324 5.9e-05 69_[+1]_3 chr19:18527262-18527342 5.9e-05 14_[+1]_58 chr20:305086-305166 7.9e-05 47_[+1]_25 chr11:123612320-12361240 7.9e-05 44_[+1]_28 chr4:54232191-54232271 7.9e-05 20_[+1]_52 chr2:27315639-27315719 7.9e-05 42_[+1]_30 chr18:9073750-9073830 7.9e-05 72_[+1] chr16:8159649-8159729 7.9e-05 45_[+1]_27 chr16:75267917-75267997 7.9e-05 69_[+1]_3 chr12:120763380-12076346 7.9e-05 5_[+1]_67 chr17:17208924-17209004 7.9e-05 66_[+1]_6 chr7:913129-913209 7.9e-05 69_[+1]_3 chr3:14165768-14165848 7.9e-05 8_[+1]_64 chr3:48281798-48281878 7.9e-05 6_[+1]_66 chr5:172759060-172759140 7.9e-05 64_[+1]_8 chr2:68589291-68589371 7.9e-05 35_[+1]_37 chr8:145800941-145801021 7.9e-05 30_[+1]_42 chr12:56513314-56513394 7.9e-05 44_[+1]_28 chr17:34965371-34965451 0.00011 26_[+1]_46 chr19:55987556-55987636 0.00011 31_[+1]_41 chr5:176739268-176739348 0.00011 7_[+1]_65 chr13:27998774-27998854 0.00011 55_[+1]_17 chr16:30418594-30418674 0.00011 11_[+1]_61 chr9:140171519-140171599 0.00011 49_[+1]_23 chr3:167814083-167814163 0.00011 5_[+1]_67 chr15:68522397-68522477 0.00011 64_[+1]_8 chr17:34890808-34890888 0.00011 23_[+1]_49 chr2:75062131-75062211 0.00011 15_[+1]_57 chr16:29721789-29721869 0.00011 31_[+1]_41 chr17:42404328-42404408 0.00011 40_[+1]_32 chr11:66095926-66096006 0.00011 7_[+1]_65 chr6:109103648-109103728 0.00011 47_[+1]_25 chr3:196246150-196246230 0.00011 33_[+1]_39 chr3:141998965-141999045 0.00011 33_[+1]_39 chr19:14529112-14529192 0.00013 59_[+1]_13 chr1:200639589-200639669 0.00013 67_[+1]_5 chr1:245026247-245026327 0.00013 45_[+1]_27 chr10:81918466-81918546 0.00013 14_[+1]_58 chr1:2130681-2130761 0.00013 46_[+1]_26 chr15:81558330-81558410 0.00013 45_[+1]_27 chr1:204488258-204488338 0.00013 43_[+1]_29 chr2:85766906-85766986 0.00013 23_[+1]_49 chr3:183967342-183967422 0.00013 19_[+1]_53 chr1:33501802-33501882 0.00013 47_[+1]_25 chr22:38662246-38662326 0.00015 12_[+1]_60 chr5:158636743-158636823 0.00015 59_[+1]_13 chr12:122236268-12223634 0.00015 7_[+1]_65 chr5:138609797-138609877 0.00015 43_[+1]_29 chr17:5342386-5342466 0.00015 24_[+1]_48 chr7:105162625-105162705 0.00015 58_[+1]_14 chr19:12834734-12834814 0.00015 29_[+1]_43 chr12:54674083-54674163 0.00015 23_[+1]_49 chr21:46961690-46961770 0.00015 31_[+1]_41 chr7:1513832-1513912 0.00015 33_[+1]_39 chr9:117247298-117247378 0.0002 45_[+1]_27 chr15:91084202-91084282 0.0002 7_[+1]_65 chr6:111303230-111303310 0.0002 35_[+1]_37 chr10:30703076-30703156 0.0002 33_[+1]_39 chr16:4524670-4524750 0.0002 37_[+1]_35 chr16:53584028-53584108 0.0002 48_[+1]_24 chr15:34730050-34730130 0.0002 6_[+1]_66 chr12:117125864-11712594 0.0002 43_[+1]_29 chr9:130797613-130797693 0.0002 55_[+1]_17 chr7:157180024-157180104 0.0002 23_[+1]_49 chr19:46242887-46242967 0.0002 51_[+1]_21 chr1:21945784-21945864 0.0002 17_[+1]_55 chr5:131654579-131654659 0.0002 37_[+1]_35 chr5:141350044-141350124 0.0002 64_[+1]_8 chr17:74178453-74178533 0.0002 37_[+1]_35 chr9:124041182-124041262 0.0002 39_[+1]_33 chr2:68452473-68452553 0.0002 17_[+1]_55 chr22:45710063-45710143 0.00022 3_[+1]_69 chr7:116657123-116657203 0.00022 17_[+1]_55 chr9:101595730-101595810 0.00022 58_[+1]_14 chr6:53275606-53275686 0.00022 19_[+1]_53 chr2:171181219-171181299 0.00022 12_[+1]_60 chr9:96928106-96928186 0.00025 45_[+1]_27 chr1:6454158-6454238 0.00025 40_[+1]_32 chr17:7475838-7475918 0.00025 9_[+1]_63 chr2:203815473-203815553 0.00025 48_[+1]_24 chr8:103425158-103425238 0.00025 31_[+1]_41 chr3:124269414-124269494 0.00025 14_[+1]_58 chr7:39620181-39620261 0.00025 43_[+1]_29 chr8:37888478-37888558 0.00027 32_[+1]_40 chr14:35342720-35342800 0.00027 43_[+1]_29 chr17:56083963-56084043 0.00027 31_[+1]_41 chr15:80145989-80146069 0.00029 8_[+1]_64 chr3:58147645-58147725 0.00029 61_[+1]_11 chr19:10989982-10990062 0.00029 63_[+1]_9 chr22:37957911-37957991 0.00029 63_[+1]_9 chr5:132369241-132369321 0.00029 25_[+1]_47 chr15:50647663-50647743 0.00029 24_[+1]_48 chr7:106750491-106750571 0.00029 45_[+1]_27 chr10:94513768-94513848 0.00029 39_[+1]_33 chr7:116151863-116151943 0.00029 30_[+1]_42 chr3:13460581-13460661 0.0003 22_[+1]_50 chr19:2739212-2739292 0.0003 11_[+1]_61 chr20:50211682-50211762 0.00033 66_[+1]_6 chr6:105406797-105406877 0.00033 33_[+1]_39 chr9:101338025-101338105 0.00033 36_[+1]_36 chr11:34074971-34075051 0.00033 26_[+1]_46 chr1:32879668-32879748 0.00033 40_[+1]_32 chr5:142599400-142599480 0.00033 18_[+1]_54 chr2:172289957-172290037 0.00033 49_[+1]_23 chr15:66155111-66155191 0.00033 61_[+1]_11 chr2:177796790-177796870 0.00036 53_[+1]_19 chrX:129728528-129728608 0.00036 46_[+1]_26 chr22:29949826-29949906 0.00039 20_[+1]_52 chrX:106920145-106920225 0.00042 21_[+1]_51 chr3:155052733-155052813 0.00042 24_[+1]_48 chr16:81538723-81538803 0.00042 22_[+1]_50 chr6:5270458-5270538 0.00042 50_[+1]_22 chr7:105697529-105697609 0.00048 68_[+1]_4 chr1:118472362-118472442 0.00048 27_[+1]_45 chr10:102747302-10274738 0.00048 19_[+1]_53 chr19:58331061-58331141 0.00051 44_[+1]_28 chr12:7074416-7074496 0.00058 34_[+1]_38 chr8:68167968-68168048 0.00058 69_[+1]_3 chr6:15264395-15264475 0.00058 36_[+1]_36 chr10:104210268-10421034 0.00058 38_[+1]_34 chr13:76123527-76123607 0.00058 64_[+1]_8 chr16:85654150-85654230 0.00058 27_[+1]_45 chr11:32469940-32470020 0.00058 64_[+1]_8 chr1:38273423-38273503 0.00058 53_[+1]_19 chr22:29877073-29877153 0.00058 17_[+1]_55 chrX:153946245-153946325 0.00059 45_[+1]_27 chr5:33441322-33441402 0.0007 31_[+1]_41 chr10:44101846-44101926 0.0007 35_[+1]_37 chr2:10588857-10588937 0.0007 28_[+1]_44 chr1:43148661-43148741 0.0007 31_[+1]_41 chr17:38256933-38257013 0.0007 35_[+1]_37 chr20:30135177-30135257 0.0007 33_[+1]_39 chr2:113357767-113357847 0.0007 54_[+1]_18 chr17:8152626-8152706 0.0007 27_[+1]_45 chr19:33162868-33162948 0.00074 13_[+1]_59 chr1:76251731-76251811 0.00083 11_[+1]_61 chr7:105924487-105924567 0.00087 39_[+1]_33 chr5:175815543-175815623 0.00087 48_[+1]_24 chr12:110907060-11090714 0.00099 28_[+1]_44 chr19:39339981-39340061 0.00099 64_[+1]_8 chr19:7968550-7968630 0.00099 51_[+1]_21 chr1:165798226-165798306 0.00099 34_[+1]_38 chr12:131356325-13135640 0.0011 37_[+1]_35 chr8:10697386-10697466 0.0011 44_[+1]_28 chr19:41257112-41257192 0.0011 1_[+1]_71 chr9:130565278-130565358 0.0013 22_[+1]_50 chr9:37485903-37485983 0.0014 71_[+1]_1 chr6:160403046-160403126 0.0016 43_[+1]_29 chr19:1592292-1592372 0.0016 55_[+1]_17 chr7:75987585-75987665 0.0017 59_[+1]_13 chr17:57784740-57784820 0.0018 41_[+1]_31 chr15:75497224-75497304 0.0018 32_[+1]_40 chr2:203776323-203776403 0.0018 53_[+1]_19 chr2:74369664-74369744 0.0021 66_[+1]_6 chr9:131084751-131084831 0.0021 20_[+1]_52 chr16:11945337-11945417 0.0022 54_[+1]_18 chr6:42182648-42182728 0.0025 9_[+1]_63 chr16:83986653-83986733 0.0025 33_[+1]_39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCACGTGS width=8 seqs=228 chr16:58549318-58549398 ( 36) CCACGTGG 1 chr1:229761929-229762009 ( 41) CCACGTGG 1 chr6:35466362-35466442 ( 49) CCACGTGG 1 chr19:56151532-56151612 ( 8) CCACGTGG 1 chr1:111991844-111991924 ( 18) CCACGTGG 1 chr5:61699622-61699702 ( 48) CCACGTGG 1 chr19:41168847-41168927 ( 29) CCACGTGG 1 chr17:33469298-33469378 ( 6) CCACGTGG 1 chr1:156783727-156783807 ( 23) CCACGTGG 1 chr2:27440292-27440372 ( 26) CCACGTGG 1 chr16:66550841-66550921 ( 19) CCACGTGG 1 chr5:90628222-90628302 ( 42) CCACGTGG 1 chr11:46579509-46579589 ( 50) CCACGTGG 1 chr17:72957005-72957085 ( 8) CCACGTGG 1 chr12:64615985-64616065 ( 55) CCACGTGG 1 chr10:71094383-71094463 ( 42) CCACGTGG 1 chr1:11120232-11120312 ( 36) CCACGTGG 1 chr10:76995312-76995392 ( 3) CCACGTGG 1 chr8:55047754-55047834 ( 34) CCACGTGG 1 chr16:88848342-88848422 ( 43) CCACGTGG 1 chr3:183851940-183852020 ( 22) CCACGTGG 1 chr10:11916876-11916956 ( 43) CCACGTGG 1 chr5:176817568-176817648 ( 46) CCACGTGG 1 chr22:21123402-21123482 ( 23) CCACGTGG 1 chr22:19930016-19930096 ( 21) CCACGTGG 1 chr5:170815558-170815638 ( 30) CCACGTGG 1 chr17:33307435-33307515 ( 23) CCACGTGG 1 chr7:130581899-130581979 ( 61) CCACGTGG 1 chr20:39657105-39657185 ( 37) CCACGTGG 1 chr1:153483551-153483631 ( 71) CCACGTGG 1 chr10:99161026-99161106 ( 33) CCACGTGG 1 chr17:34958009-34958089 ( 22) CCACGTGG 1 chr17:38269607-38269687 ( 59) CCACGTGG 1 chr12:112074446-11207452 ( 2) CCACGTGG 1 chr8:99129441-99129521 ( 51) CCACGTGG 1 chr21:36012923-36013003 ( 53) CCACGTGG 1 chr17:39894389-39894469 ( 60) CCACGTGG 1 chrX:48433181-48433261 ( 50) CCACGTGG 1 chr14:23633601-23633681 ( 11) CCACGTGG 1 chr16:85450096-85450176 ( 23) CCACGTGG 1 chr19:10138534-10138614 ( 56) CCACGTGG 1 chr7:150759516-150759596 ( 36) CCACGTGG 1 chr17:56327186-56327266 ( 49) CCACGTGG 1 chr2:11919442-11919522 ( 7) CCACGTGG 1 chr19:4809736-4809816 ( 12) CCACGTGG 1 chr17:74502599-74502679 ( 58) CCACGTGG 1 chr9:140429439-140429519 ( 61) CCACGTGG 1 chrX:153991790-153991870 ( 10) CCACGTGG 1 chr19:41903220-41903300 ( 24) CCACGTGC 1 chr1:210001285-210001365 ( 45) CCACGTGC 1 chr1:18081788-18081868 ( 58) CCACGTGC 1 chr17:36908724-36908804 ( 31) CCACGTGC 1 chr3:156271905-156271985 ( 11) CCACGTGC 1 chr17:62084180-62084260 ( 22) CCACGTGC 1 chr4:57302524-57302604 ( 32) CCACGTGC 1 chr3:16361014-16361094 ( 49) CCACGTGC 1 chr19:1864246-1864326 ( 21) CCACGTGC 1 chr15:41407838-41407918 ( 28) CCACGTGC 1 chr2:99081471-99081551 ( 31) CCACGTGC 1 chr1:155243329-155243409 ( 32) CCACGTGC 1 chr3:47913044-47913124 ( 55) CCACGTGC 1 chr17:17109782-17109862 ( 44) CCACGTGC 1 chr19:1045110-1045190 ( 55) CCACGTGC 1 chr11:118851041-11885112 ( 1) CCACGTGC 1 chr14:91884478-91884558 ( 42) CCACGTGC 1 chr12:131311005-13131108 ( 44) CCACGTGC 1 chr1:245082226-245082306 ( 2) CCACGTGC 1 chr2:232328497-232328577 ( 8) CCACGTGC 1 chr19:1672471-1672551 ( 51) CCACGTGC 1 chr3:185531826-185531906 ( 54) CCACGTGC 1 chrX:153627244-153627324 ( 70) CCACGTGC 1 chr19:18527262-18527342 ( 15) CCACGTGC 1 chr20:305086-305166 ( 48) ACACGTGG 1 chr11:123612320-12361240 ( 45) ACACGTGG 1 chr4:54232191-54232271 ( 21) ACACGTGG 1 chr2:27315639-27315719 ( 43) ACACGTGG 1 chr18:9073750-9073830 ( 73) ACACGTGG 1 chr16:8159649-8159729 ( 46) ACACGTGG 1 chr16:75267917-75267997 ( 70) ACACGTGG 1 chr12:120763380-12076346 ( 6) ACACGTGG 1 chr17:17208924-17209004 ( 67) ACACGTGG 1 chr7:913129-913209 ( 70) ACACGTGG 1 chr3:14165768-14165848 ( 9) ACACGTGG 1 chr3:48281798-48281878 ( 7) ACACGTGG 1 chr5:172759060-172759140 ( 65) ACACGTGG 1 chr2:68589291-68589371 ( 36) ACACGTGG 1 chr8:145800941-145801021 ( 31) ACACGTGG 1 chr12:56513314-56513394 ( 45) ACACGTGG 1 chr17:34965371-34965451 ( 27) GCACGTGG 1 chr19:55987556-55987636 ( 32) GCACGTGG 1 chr5:176739268-176739348 ( 8) GCACGTGG 1 chr13:27998774-27998854 ( 56) GCACGTGG 1 chr16:30418594-30418674 ( 12) GCACGTGG 1 chr9:140171519-140171599 ( 50) GCACGTGG 1 chr3:167814083-167814163 ( 6) GCACGTGG 1 chr15:68522397-68522477 ( 65) GCACGTGG 1 chr17:34890808-34890888 ( 24) GCACGTGG 1 chr2:75062131-75062211 ( 16) GCACGTGG 1 chr16:29721789-29721869 ( 32) GCACGTGG 1 chr17:42404328-42404408 ( 41) GCACGTGG 1 chr11:66095926-66096006 ( 8) GCACGTGG 1 chr6:109103648-109103728 ( 48) GCACGTGG 1 chr3:196246150-196246230 ( 34) GCACGTGG 1 chr3:141998965-141999045 ( 34) GCACGTGG 1 chr19:14529112-14529192 ( 60) CCACGTGT 1 chr1:200639589-200639669 ( 68) CCACGTGT 1 chr1:245026247-245026327 ( 46) CCACGTGT 1 chr10:81918466-81918546 ( 15) CCACGTGT 1 chr1:2130681-2130761 ( 47) CCACGTGT 1 chr15:81558330-81558410 ( 46) CCACGTGT 1 chr1:204488258-204488338 ( 44) CCACGTGT 1 chr2:85766906-85766986 ( 24) CCACGTGT 1 chr3:183967342-183967422 ( 20) CCACGTGT 1 chr1:33501802-33501882 ( 48) CCACGTGT 1 chr22:38662246-38662326 ( 13) ACACGTGC 1 chr5:158636743-158636823 ( 60) ACACGTGC 1 chr12:122236268-12223634 ( 8) ACACGTGC 1 chr5:138609797-138609877 ( 44) ACACGTGC 1 chr17:5342386-5342466 ( 25) ACACGTGC 1 chr7:105162625-105162705 ( 59) ACACGTGC 1 chr19:12834734-12834814 ( 30) ACACGTGC 1 chr12:54674083-54674163 ( 24) ACACGTGC 1 chr21:46961690-46961770 ( 32) ACACGTGC 1 chr7:1513832-1513912 ( 34) ACACGTGC 1 chr9:117247298-117247378 ( 46) GCACGTGC 1 chr15:91084202-91084282 ( 8) CCACATGG 1 chr6:111303230-111303310 ( 36) GCACGTGC 1 chr10:30703076-30703156 ( 34) CCACATGG 1 chr16:4524670-4524750 ( 38) GCACGTGC 1 chr16:53584028-53584108 ( 49) GCACGTGC 1 chr15:34730050-34730130 ( 7) CCACATGG 1 chr12:117125864-11712594 ( 44) GCACGTGC 1 chr9:130797613-130797693 ( 56) CCACATGG 1 chr7:157180024-157180104 ( 24) GCACGTGC 1 chr19:46242887-46242967 ( 52) CCACATGG 1 chr1:21945784-21945864 ( 18) GCACGTGC 1 chr5:131654579-131654659 ( 38) CCACATGG 1 chr5:141350044-141350124 ( 65) CCACATGG 1 chr17:74178453-74178533 ( 38) GCACGTGC 1 chr9:124041182-124041262 ( 40) GCACGTGC 1 chr2:68452473-68452553 ( 18) CCACATGG 1 chr22:45710063-45710143 ( 4) CCATGTGG 1 chr7:116657123-116657203 ( 18) CCATGTGG 1 chr9:101595730-101595810 ( 59) CCATGTGG 1 chr6:53275606-53275686 ( 20) CCATGTGG 1 chr2:171181219-171181299 ( 13) CCATGTGG 1 chr9:96928106-96928186 ( 46) GCACGTGT 1 chr1:6454158-6454238 ( 41) GCACGTGT 1 chr17:7475838-7475918 ( 10) GCACGTGT 1 chr2:203815473-203815553 ( 49) GCACGTGT 1 chr8:103425158-103425238 ( 32) GCACGTGT 1 chr3:124269414-124269494 ( 15) GCACGTGT 1 chr7:39620181-39620261 ( 44) GCACGTGT 1 chr8:37888478-37888558 ( 33) CCACATGC 1 chr14:35342720-35342800 ( 44) CCACATGC 1 chr17:56083963-56084043 ( 32) CCACATGC 1 chr15:80145989-80146069 ( 9) CCATGTGC 1 chr3:58147645-58147725 ( 62) CCATGTGC 1 chr19:10989982-10990062 ( 64) CCATGTGC 1 chr22:37957911-37957991 ( 64) CCATGTGC 1 chr5:132369241-132369321 ( 26) CCATGTGC 1 chr15:50647663-50647743 ( 25) CCATGTGC 1 chr7:106750491-106750571 ( 46) CCATGTGC 1 chr10:94513768-94513848 ( 40) CCATGTGC 1 chr7:116151863-116151943 ( 31) CCATGTGC 1 chr3:13460581-13460661 ( 23) ACACATGG 1 chr19:2739212-2739292 ( 12) ACACATGG 1 chr20:50211682-50211762 ( 67) GCACATGG 1 chr6:105406797-105406877 ( 34) ACATGTGG 1 chr9:101338025-101338105 ( 37) GCACATGG 1 chr11:34074971-34075051 ( 27) GCACATGG 1 chr1:32879668-32879748 ( 41) GCACATGG 1 chr5:142599400-142599480 ( 19) GCACATGG 1 chr2:172289957-172290037 ( 50) ACATGTGG 1 chr15:66155111-66155191 ( 62) GCACATGG 1 chr2:177796790-177796870 ( 54) CCACATGT 1 chrX:129728528-129728608 ( 47) CCACATGT 1 chr22:29949826-29949906 ( 21) ACACATGC 1 chrX:106920145-106920225 ( 22) ACATGTGC 1 chr3:155052733-155052813 ( 25) ACATGTGC 1 chr16:81538723-81538803 ( 23) ACATGTGC 1 chr6:5270458-5270538 ( 51) ACATGTGC 1 chr7:105697529-105697609 ( 69) GCATGTGC 1 chr1:118472362-118472442 ( 28) CCTCGTGG 1 chr10:102747302-10274738 ( 20) GCATGTGC 1 chr19:58331061-58331141 ( 45) CCACGTTG 1 chr12:7074416-7074496 ( 35) GCACATGT 1 chr8:68167968-68168048 ( 70) GCACATGT 1 chr6:15264395-15264475 ( 37) GCACATGT 1 chr10:104210268-10421034 ( 39) CCACGCGG 1 chr13:76123527-76123607 ( 65) CCACGCGG 1 chr16:85654150-85654230 ( 28) CCACGCGG 1 chr11:32469940-32470020 ( 65) GCACATGT 1 chr1:38273423-38273503 ( 54) CCACGCGG 1 chr22:29877073-29877153 ( 18) CCACGCGG 1 chrX:153946245-153946325 ( 46) GCATGTGT 1 chr5:33441322-33441402 ( 32) CCGCGTGG 1 chr10:44101846-44101926 ( 36) CCGCGTGG 1 chr2:10588857-10588937 ( 29) CCTCGTGC 1 chr1:43148661-43148741 ( 32) CCTCGTGC 1 chr17:38256933-38257013 ( 36) CCTCGTGC 1 chr20:30135177-30135257 ( 34) CCGCGTGG 1 chr2:113357767-113357847 ( 55) CCACGTGA 1 chr17:8152626-8152706 ( 28) CCACGTGA 1 chr19:33162868-33162948 ( 14) ACTCGTGG 1 chr1:76251731-76251811 ( 12) GCATATGG 1 chr7:105924487-105924567 ( 40) CCTCGTGT 1 chr5:175815543-175815623 ( 49) CCTCGTGT 1 chr12:110907060-11090714 ( 29) CCGCGTGC 1 chr19:39339981-39340061 ( 65) CCGCGTGC 1 chr19:7968550-7968630 ( 52) GCACGTTG 1 chr1:165798226-165798306 ( 35) CCACGAGG 1 chr12:131356325-13135640 ( 38) GCACGCGG 1 chr8:10697386-10697466 ( 45) GCACGCGG 1 chr19:41257112-41257192 ( 2) GCACGCGG 1 chr9:130565278-130565358 ( 23) GCGCGTGG 1 chr9:37485903-37485983 ( 72) CCGCGTGT 1 chr6:160403046-160403126 ( 44) TCACGTGC 1 chr19:1592292-1592372 ( 56) GCACGCGC 1 chr7:75987585-75987665 ( 60) CCATGCGG 1 chr17:57784740-57784820 ( 42) ACACGTTT 1 chr15:75497224-75497304 ( 33) CCTCATGC 1 chr2:203776323-203776403 ( 54) GCACGAGG 1 chr2:74369664-74369744 ( 67) ACTTGTGG 1 chr9:131084751-131084831 ( 21) CCATGTTC 1 chr16:11945337-11945417 ( 55) GCGCGTGT 1 chr6:42182648-42182728 ( 10) CCACATTT 1 chr16:83986653-83986733 ( 34) CCATGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.93441 E= 1.9e-233 -27 99 -36 -548 -1448 174 -1448 -1448 221 -1448 -311 -231 -1448 155 -1448 -68 -66 -1448 152 -1448 -393 -277 -1448 226 -1448 -1448 169 -316 -451 6 85 -58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 228 E= 1.9e-233 0.166667 0.592105 0.236842 0.004386 0.000000 1.000000 0.000000 0.000000 0.925439 0.000000 0.035088 0.039474 0.000000 0.877193 0.000000 0.122807 0.127193 0.000000 0.872807 0.000000 0.013158 0.043860 0.000000 0.942982 0.000000 0.000000 0.978070 0.021930 0.008772 0.311404 0.548246 0.131579 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCACGTGS MEME-1 regular expression -------------------------------------------------------------------------------- [CG]CACGTG[GC] -------------------------------------------------------------------------------- Time 4.72 secs. ******************************************************************************** ******************************************************************************** MOTIF TYCTTATC MEME-2 width = 8 sites = 6 llr = 68 E-value = 2.3e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::a:: pos.-specific C :5a::::a probability G :::::::: matrix T a5:aa:a: bits 2.3 * **** 2.1 * **** 1.9 * **** 1.6 * ****** Relative 1.4 * ****** Entropy 1.2 * ****** (16.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCCTTATC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr14:35342720-35342800 4 5.20e-06 GCG TTCTTATC AAAACAATAG chr5:172447362-172447442 28 5.20e-06 CTTGTGACCT TTCTTATC AGTATGGTCA chr3:47913044-47913124 27 5.20e-06 CCACGCCCTC TTCTTATC ATCATGTAAG chr22:45710063-45710143 15 1.31e-05 CATGTGGCCC TCCTTATC TGTTCCCACC chrX:48433181-48433261 42 1.31e-05 ACACTTACTT TCCTTATC CCACGTGGCC chr14:23633601-23633681 58 1.31e-05 gctctctgtt tccttatc tgttctggga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:35342720-35342800 5.2e-06 3_[+2]_69 chr5:172447362-172447442 5.2e-06 27_[+2]_45 chr3:47913044-47913124 5.2e-06 26_[+2]_46 chr22:45710063-45710143 1.3e-05 14_[+2]_58 chrX:48433181-48433261 1.3e-05 41_[+2]_31 chr14:23633601-23633681 1.3e-05 57_[+2]_15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TYCTTATC width=8 seqs=6 chr14:35342720-35342800 ( 4) TTCTTATC 1 chr5:172447362-172447442 ( 28) TTCTTATC 1 chr3:47913044-47913124 ( 27) TTCTTATC 1 chr22:45710063-45710143 ( 15) TCCTTATC 1 chrX:48433181-48433261 ( 42) TCCTTATC 1 chr14:23633601-23633681 ( 58) TCCTTATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.0178 E= 2.3e+003 -923 -923 -923 235 -923 74 -923 135 -923 174 -923 -923 -923 -923 -923 235 -923 -923 -923 235 232 -923 -923 -923 -923 -923 -923 235 -923 174 -923 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 6 E= 2.3e+003 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TYCTTATC MEME-2 regular expression -------------------------------------------------------------------------------- T[CT]CTTATC -------------------------------------------------------------------------------- Time 8.13 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTCCTRT MEME-3 width = 8 sites = 7 llr = 74 E-value = 4.0e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::::::3: pos.-specific C a::aa::: probability G ::::::6: matrix T :aa::a1a bits 2.3 ** * * 2.1 ** * * 1.9 ** * * 1.6 ****** * Relative 1.4 ****** * Entropy 1.2 ****** * (15.2 bits) 0.9 ****** * 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTCCTGT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:101338025-101338105 63 1.20e-05 ctggtctcct cttcctgt tgcatccacc chr19:4815788-4815868 66 1.20e-05 GCACTTCCCG CTTCCTGT TCCCTTT chr1:205600379-205600459 67 1.20e-05 CATTTTCCAA CTTCCTGT CACTAC chr17:17208924-17209004 54 1.20e-05 GGTAGAGGCA CTTCCTGT ACTGCACACG chr6:160403046-160403126 9 1.99e-05 GTGAAGTA CTTCCTAT ATAAGCTCTG chr2:203815473-203815553 34 1.99e-05 agtgctGCCA CTTCCTAT GAACTGAGCA chr2:74369664-74369744 29 2.77e-05 AAAATGTGCT CTTCCTTT TGCGAGGCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:101338025-101338105 1.2e-05 62_[+3]_10 chr19:4815788-4815868 1.2e-05 65_[+3]_7 chr1:205600379-205600459 1.2e-05 66_[+3]_6 chr17:17208924-17209004 1.2e-05 53_[+3]_19 chr6:160403046-160403126 2e-05 8_[+3]_64 chr2:203815473-203815553 2e-05 33_[+3]_39 chr2:74369664-74369744 2.8e-05 28_[+3]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTCCTRT width=8 seqs=7 chr9:101338025-101338105 ( 63) CTTCCTGT 1 chr19:4815788-4815868 ( 66) CTTCCTGT 1 chr1:205600379-205600459 ( 67) CTTCCTGT 1 chr17:17208924-17209004 ( 54) CTTCCTGT 1 chr6:160403046-160403126 ( 9) CTTCCTAT 1 chr2:203815473-203815553 ( 34) CTTCCTAT 1 chr2:74369664-74369744 ( 29) CTTCCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.9536 E= 4.0e+004 -945 174 -945 -945 -945 -945 -945 235 -945 -945 -945 235 -945 174 -945 -945 -945 174 -945 -945 -945 -945 -945 235 51 -945 91 -46 -945 -945 -945 235 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 7 E= 4.0e+004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.285714 0.000000 0.571429 0.142857 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTCCTRT MEME-3 regular expression -------------------------------------------------------------------------------- CTTCCT[GA]T -------------------------------------------------------------------------------- Time 11.54 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTSTTCT MEME-4 width = 8 sites = 6 llr = 65 E-value = 1.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C a::5::a: probability G :::3:::: matrix T :aa2aa:a bits 2.3 ** ** * 2.1 ** ** * 1.9 ** ** * 1.6 *** **** Relative 1.4 *** **** Entropy 1.2 *** **** (15.6 bits) 0.9 *** **** 0.7 *** **** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTCTTCT consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:35466362-35466442 22 7.73e-06 ACACCCATCC CTTCTTCT ATCTCACTCC chr17:57784740-57784820 25 7.73e-06 CGCGCCTTCC CTTCTTCT GGGCAGCGAA chr10:99161026-99161106 64 7.73e-06 TTCACTTCCT CTTCTTCT GGCGTCACT chr22:37957911-37957991 25 1.56e-05 GGCTCCAAAA CTTGTTCT TGCGTCATTC chrX:48433181-48433261 68 1.56e-05 CCGCCGCCAT CTTGTTCT GCCGG chr5:172447362-172447442 67 2.07e-05 TTTGCCTTGA CTTTTTCT CACATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:35466362-35466442 7.7e-06 21_[+4]_51 chr17:57784740-57784820 7.7e-06 24_[+4]_48 chr10:99161026-99161106 7.7e-06 63_[+4]_9 chr22:37957911-37957991 1.6e-05 24_[+4]_48 chrX:48433181-48433261 1.6e-05 67_[+4]_5 chr5:172447362-172447442 2.1e-05 66_[+4]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTSTTCT width=8 seqs=6 chr6:35466362-35466442 ( 22) CTTCTTCT 1 chr17:57784740-57784820 ( 25) CTTCTTCT 1 chr10:99161026-99161106 ( 64) CTTCTTCT 1 chr22:37957911-37957991 ( 25) CTTGTTCT 1 chrX:48433181-48433261 ( 68) CTTGTTCT 1 chr5:172447362-172447442 ( 67) CTTTTTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.229 E= 1.1e+004 -923 174 -923 -923 -923 -923 -923 235 -923 -923 -923 235 -923 74 13 -24 -923 -923 -923 235 -923 -923 -923 235 -923 174 -923 -923 -923 -923 -923 235 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 6 E= 1.1e+004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.333333 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTSTTCT MEME-4 regular expression -------------------------------------------------------------------------------- CTT[CG]TTCT -------------------------------------------------------------------------------- Time 14.94 secs. ******************************************************************************** ******************************************************************************** MOTIF AVWGAWAA MEME-5 width = 8 sites = 27 llr = 229 E-value = 1.2e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a561a6a8 pos.-specific C :3:::::: probability G :3:8:1:: matrix T ::4::3:2 bits 2.3 * * * 2.1 * * * 1.9 * * * 1.6 * * ** Relative 1.4 * * * ** Entropy 1.2 * * * ** (12.3 bits) 0.9 * ****** 0.7 * ****** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAAGAAAA consensus CT T sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:245026247-245026327 15 4.03e-06 CGAGAAAGCC AAAGAAAA ACTGCGCGGC chr3:48281798-48281878 58 4.03e-06 atgtcagggc aaagaaaa ggacggcggg chr7:116151863-116151943 70 7.96e-06 TGCAACTGAA AATGAAAA TGA chr1:246038403-246038483 64 1.19e-05 TTGTAATGTC AAAGATAA AAGTACTGG chr19:39339981-39340061 36 1.57e-05 CAGCGAAGAA AATGATAA AGGGGAAAAA chr22:45710063-45710143 61 1.57e-05 TGGACAGTTG AATGATAA GCACACTGTG chr22:21123402-21123482 56 2.17e-05 TGGTTTTGAC ACAGAAAA GAGGAAGTAA chr10:102747302-10274738 58 2.78e-05 GAAGTGGGAG AGAGAAAA GTGGTAACCT chr1:204488258-204488338 19 4.23e-05 gcaagataag agtgaaaa tgtgctgagg chr2:177796790-177796870 41 4.88e-05 GATGAAACTG AAAGAAAT GGTGGCCACA chr3:58147645-58147725 53 4.88e-05 tcctgtggct aaagaaat gccatgtgct chr16:29721789-29721869 62 4.88e-05 acctagtggc aataaaaa tcctcttcat chr15:91084202-91084282 35 5.85e-05 gGTGTAAGAC ACAGATAA GTAGTCTGTA chr5:90628222-90628302 62 5.85e-05 agtgctaaac aatgaaat gtgagcctaa chr5:141350044-141350124 14 5.85e-05 CTGAGGGCAG ACAGATAA AAAGTCCTCA chr16:8159649-8159729 59 7.05e-05 cgtggctgac aaagagaa gggaagatgg chr7:106750491-106750571 37 7.05e-05 catggtgcag agagataa tccatgtgct chr19:2739212-2739292 40 7.62e-05 GCGTGTGGCC ACTGATAA GGGCCGCATT chr3:14165768-14165848 34 9.05e-05 CAGGAGCGGT AGTGATAA TTAACCACCA chr7:105924487-105924567 63 1.18e-04 TTTCCTTTTC ACAGAAAT CCTGTAATGA chr3:141998965-141999045 72 1.18e-04 cacctagtga actaaaaa t chr10:81918466-81918546 2 1.28e-04 A AGTAAAAA TCTTTCCACG chr17:34965371-34965451 10 1.37e-04 gtgaggctc aaataaaa caTCACTCAG chr12:54674083-54674163 52 1.54e-04 AGTTCATTGC AAAAAAAT TGTTACCTCC chr11:46579509-46579589 41 1.66e-04 CCATGTGGAG AGAGAGAA GCCACGTGGA chr19:46242887-46242967 60 1.81e-04 aaccacatgg actgagaa tggaggagaa chr6:53275606-53275686 70 1.98e-04 cagcattgcg agtgagaa ttg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:245026247-245026327 4e-06 14_[+5]_58 chr3:48281798-48281878 4e-06 57_[+5]_15 chr7:116151863-116151943 8e-06 69_[+5]_3 chr1:246038403-246038483 1.2e-05 63_[+5]_9 chr19:39339981-39340061 1.6e-05 35_[+5]_37 chr22:45710063-45710143 1.6e-05 60_[+5]_12 chr22:21123402-21123482 2.2e-05 55_[+5]_17 chr10:102747302-10274738 2.8e-05 57_[+5]_15 chr1:204488258-204488338 4.2e-05 18_[+5]_54 chr2:177796790-177796870 4.9e-05 40_[+5]_32 chr3:58147645-58147725 4.9e-05 52_[+5]_20 chr16:29721789-29721869 4.9e-05 61_[+5]_11 chr15:91084202-91084282 5.8e-05 34_[+5]_38 chr5:90628222-90628302 5.8e-05 61_[+5]_11 chr5:141350044-141350124 5.8e-05 13_[+5]_59 chr16:8159649-8159729 7.1e-05 58_[+5]_14 chr7:106750491-106750571 7.1e-05 36_[+5]_36 chr19:2739212-2739292 7.6e-05 39_[+5]_33 chr3:14165768-14165848 9.1e-05 33_[+5]_39 chr7:105924487-105924567 0.00012 62_[+5]_10 chr3:141998965-141999045 0.00012 71_[+5]_1 chr10:81918466-81918546 0.00013 1_[+5]_71 chr17:34965371-34965451 0.00014 9_[+5]_63 chr12:54674083-54674163 0.00015 51_[+5]_21 chr11:46579509-46579589 0.00017 40_[+5]_32 chr19:46242887-46242967 0.00018 59_[+5]_13 chr6:53275606-53275686 0.0002 69_[+5]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AVWGAWAA width=8 seqs=27 chr1:245026247-245026327 ( 15) AAAGAAAA 1 chr3:48281798-48281878 ( 58) AAAGAAAA 1 chr7:116151863-116151943 ( 70) AATGAAAA 1 chr1:246038403-246038483 ( 64) AAAGATAA 1 chr19:39339981-39340061 ( 36) AATGATAA 1 chr22:45710063-45710143 ( 61) AATGATAA 1 chr22:21123402-21123482 ( 56) ACAGAAAA 1 chr10:102747302-10274738 ( 58) AGAGAAAA 1 chr1:204488258-204488338 ( 19) AGTGAAAA 1 chr2:177796790-177796870 ( 41) AAAGAAAT 1 chr3:58147645-58147725 ( 53) AAAGAAAT 1 chr16:29721789-29721869 ( 62) AATAAAAA 1 chr15:91084202-91084282 ( 35) ACAGATAA 1 chr5:90628222-90628302 ( 62) AATGAAAT 1 chr5:141350044-141350124 ( 14) ACAGATAA 1 chr16:8159649-8159729 ( 59) AAAGAGAA 1 chr7:106750491-106750571 ( 37) AGAGATAA 1 chr19:2739212-2739292 ( 40) ACTGATAA 1 chr3:14165768-14165848 ( 34) AGTGATAA 1 chr7:105924487-105924567 ( 63) ACAGAAAT 1 chr3:141998965-141999045 ( 72) ACTAAAAA 1 chr10:81918466-81918546 ( 2) AGTAAAAA 1 chr17:34965371-34965451 ( 10) AAATAAAA 1 chr12:54674083-54674163 ( 52) AAAAAAAT 1 chr11:46579509-46579589 ( 41) AGAGAGAA 1 chr19:46242887-46242967 ( 60) ACTGAGAA 1 chr6:53275606-53275686 ( 70) AGTGAGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.594 E= 1.2e+003 232 -1140 -1140 -1140 126 -21 -23 -1140 147 -1140 -1140 118 -44 -1140 142 -240 232 -1140 -1140 -1140 147 -1140 -104 59 232 -1140 -1140 -1140 202 -1140 -1140 -8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 27 E= 1.2e+003 1.000000 0.000000 0.000000 0.000000 0.481481 0.259259 0.259259 0.000000 0.555556 0.000000 0.000000 0.444444 0.148148 0.000000 0.814815 0.037037 1.000000 0.000000 0.000000 0.000000 0.555556 0.000000 0.148148 0.296296 1.000000 0.000000 0.000000 0.000000 0.814815 0.000000 0.000000 0.185185 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVWGAWAA MEME-5 regular expression -------------------------------------------------------------------------------- A[ACG][AT]GA[AT]AA -------------------------------------------------------------------------------- Time 18.30 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:39620181-39620261 9.26e-02 80 chr2:68452473-68452553 1.59e-01 80 chr3:124269414-124269494 6.10e-03 80 chr3:141998965-141999045 3.13e-03 80 chr12:56513314-56513394 8.85e-02 44_[+1(7.86e-05)]_28 chrX:153991790-153991870 2.04e-01 9_[+1(2.96e-05)]_63 chr17:56083963-56084043 4.02e-01 80 chr3:196246150-196246230 1.75e-02 80 chr1:246038403-246038483 1.33e-02 63_[+5(1.19e-05)]_9 chr8:145800941-145801021 5.16e-02 30_[+1(7.86e-05)]_42 chr2:68589291-68589371 1.10e-01 35_[+1(7.86e-05)]_37 chr6:5270458-5270538 2.06e-02 80 chr9:140429439-140429519 1.39e-02 60_[+1(2.96e-05)]_12 chr17:74502599-74502679 1.20e-01 57_[+1(2.96e-05)]_15 chr1:33501802-33501882 4.40e-03 80 chr19:4809736-4809816 1.44e-01 11_[+1(2.96e-05)]_61 chr12:53400902-53400982 1.35e-02 51_[+4(6.21e-05)]_21 chr2:11919442-11919522 7.37e-02 6_[+1(2.96e-05)]_66 chr6:109103648-109103728 2.21e-01 80 chr17:56327186-56327266 2.00e-02 48_[+1(2.96e-05)]_24 chr7:116151863-116151943 9.25e-03 69_[+5(7.96e-06)]_3 chr7:1781743-1781823 5.34e-01 80 chrX:153946245-153946325 1.09e-02 80 chr7:150759516-150759596 4.21e-02 2_[+1(5.87e-05)]_25_[+1(2.96e-05)]_\ 37 chr10:94513768-94513848 1.26e-02 80 chr9:124041182-124041262 4.93e-01 80 chr19:10138534-10138614 1.55e-01 55_[+1(2.96e-05)]_17 chr5:175815543-175815623 1.45e-01 80 chr16:85450096-85450176 9.35e-02 22_[+1(2.96e-05)]_50 chr11:66095926-66096006 2.57e-01 80 chr7:1513832-1513912 3.00e-01 80 chr6:7239182-7239262 9.85e-01 80 chr15:66155111-66155191 2.08e-01 80 chr7:106750491-106750571 1.41e-02 36_[+5(7.05e-05)]_36 chr19:18527262-18527342 1.87e-03 14_[+1(5.87e-05)]_58 chrX:153627244-153627324 3.64e-02 69_[+1(5.87e-05)]_3 chr3:185531826-185531906 1.60e-04 53_[+1(5.87e-05)]_19 chr19:1672471-1672551 2.86e-01 50_[+1(5.87e-05)]_22 chr21:46961690-46961770 3.14e-01 80 chr14:23633601-23633681 2.13e-04 10_[+1(2.96e-05)]_39_[+2(1.31e-05)]_\ 15 chr17:74178453-74178533 2.69e-01 80 chr17:8152626-8152706 2.23e-01 80 chr17:42404328-42404408 2.00e-01 80 chr5:172759060-172759140 1.09e-01 64_[+1(7.86e-05)]_8 chr3:48281798-48281878 2.36e-03 6_[+1(7.86e-05)]_43_[+5(4.03e-06)]_\ 15 chr2:232328497-232328577 1.43e-01 7_[+1(5.87e-05)]_65 chrX:48433181-48433261 8.87e-07 41_[+2(1.31e-05)]_[+1(2.96e-05)]_10_\ [+4(1.56e-05)]_5 chr1:245082226-245082306 1.40e-01 1_[+1(5.87e-05)]_71 chr12:131311005-13131108 3.21e-01 43_[+1(5.87e-05)]_29 chr14:91884478-91884558 3.24e-01 41_[+1(5.87e-05)]_31 chr5:141350044-141350124 1.27e-02 13_[+5(5.85e-05)]_59 chr5:131654579-131654659 1.02e-01 80 chr1:76251731-76251811 5.57e-01 80 chr11:118851041-11885112 3.38e-02 [+1(5.87e-05)]_72 chr2:172289957-172290037 2.07e-01 80 chr15:50647663-50647743 6.69e-02 80 chr1:21945784-21945864 5.35e-01 80 chr16:29721789-29721869 1.29e-03 61_[+5(4.88e-05)]_11 chr3:183967342-183967422 1.49e-01 80 chr22:29877073-29877153 7.16e-01 80 chr2:85766906-85766986 3.54e-01 80 chr3:14165768-14165848 1.06e-02 8_[+1(7.86e-05)]_17_[+5(9.05e-05)]_\ 39 chr7:44162893-44162973 9.94e-01 80 chr19:46242887-46242967 1.01e-02 80 chr5:142599400-142599480 3.27e-02 80 chr7:913129-913209 3.52e-02 69_[+1(7.86e-05)]_3 chr17:39894389-39894469 9.33e-03 59_[+1(2.96e-05)]_13 chr2:113357767-113357847 3.24e-01 80 chr19:1045110-1045190 8.81e-02 54_[+1(5.87e-05)]_18 chr22:29949826-29949906 2.98e-03 80 chr5:132369241-132369321 1.56e-03 50_[+2(2.65e-05)]_22 chr1:110162306-110162386 9.92e-01 80 chr1:38273423-38273503 2.47e-01 80 chr21:36012923-36013003 2.93e-02 52_[+1(2.96e-05)]_20 chr11:32469940-32470020 4.87e-02 80 chr7:105924487-105924567 9.31e-05 80 chr8:99129441-99129521 2.24e-01 50_[+1(2.96e-05)]_22 chr2:75062131-75062211 2.12e-01 80 chr16:81538723-81538803 3.52e-02 80 chr12:112074446-11207452 8.29e-04 1_[+1(2.96e-05)]_71 chr17:17109782-17109862 3.64e-01 31_[+1(5.87e-05)]_4_[+1(5.87e-05)]_\ 29 chr17:38269607-38269687 1.11e-01 58_[+1(2.96e-05)]_14 chr12:54674083-54674163 6.09e-04 80 chr7:157180024-157180104 2.75e-01 80 chr17:34958009-34958089 2.06e-01 21_[+1(2.96e-05)]_51 chr19:12834734-12834814 5.02e-03 80 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chr6:35466362-35466442 1.63e-05 21_[+4(7.73e-06)]_19_[+1(2.96e-05)]_\ 24 chr1:229761929-229762009 2.42e-01 40_[+1(2.96e-05)]_32 chr19:41903220-41903300 5.83e-02 23_[+1(5.87e-05)]_49 chr12:110907060-11090714 6.09e-01 80 chr16:58549318-58549398 8.85e-02 35_[+1(2.96e-05)]_37 chr6:160403046-160403126 2.49e-03 8_[+3(1.99e-05)]_64 chr19:55987556-55987636 4.05e-02 80 chr2:74369664-74369744 4.36e-03 28_[+3(2.77e-05)]_44 chr19:14529112-14529192 2.73e-01 80 chr17:34965371-34965451 9.72e-03 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************