******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/MEF2D.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3:138093581-138093661 1.0000 80 chr2:188847556-188847636 1.0000 80 chr18:11917051-11917131 1.0000 80 chr5:7714435-7714515 1.0000 80 chr18:10593779-10593859 1.0000 80 chr5:55798118-55798198 1.0000 80 chr1:168583087-168583167 1.0000 80 chr2:69887926-69888006 1.0000 80 chr15:59419577-59419657 1.0000 80 chr2:109317815-109317895 1.0000 80 chr15:83755057-83755137 1.0000 80 chr17:56784150-56784230 1.0000 80 chr10:134330912-13433099 1.0000 80 chr7:93575210-93575290 1.0000 80 chr2:108977690-108977770 1.0000 80 chrX:2619849-2619929 1.0000 80 chr14:91094058-91094138 1.0000 80 chr6:143206676-143206756 1.0000 80 chr6:66171157-66171237 1.0000 80 chr6:147448026-147448106 1.0000 80 chr20:5530012-5530092 1.0000 80 chr9:102130731-102130811 1.0000 80 chr4:7833176-7833256 1.0000 80 chr6:46405534-46405614 1.0000 80 chr8:9182179-9182259 1.0000 80 chr10:52020646-52020726 1.0000 80 chr14:94000476-94000556 1.0000 80 chr4:25090218-25090298 1.0000 80 chr1:155934160-155934240 1.0000 80 chr6:110711118-110711198 1.0000 80 chr11:34631012-34631092 1.0000 80 chr2:240162277-240162357 1.0000 80 chr8:23218206-23218286 1.0000 80 chr5:131456555-131456635 1.0000 80 chr6:138014985-138015065 1.0000 80 chr12:15142890-15142970 1.0000 80 chr8:144882446-144882526 1.0000 80 chr19:3451011-3451091 1.0000 80 chr12:45718357-45718437 1.0000 80 chr16:25225078-25225158 1.0000 80 chr3:156966535-156966615 1.0000 80 chr16:88465384-88465464 1.0000 80 chr3:40665161-40665241 1.0000 80 chr5:55354366-55354446 1.0000 80 chr20:57483006-57483086 1.0000 80 chr11:66185846-66185926 1.0000 80 chr1:53477031-53477111 1.0000 80 chr16:77730206-77730286 1.0000 80 chr15:31645817-31645897 1.0000 80 chrX:41493656-41493736 1.0000 80 chr11:12039575-12039655 1.0000 80 chr20:37614330-37614410 1.0000 80 chr13:51905071-51905151 1.0000 80 chr12:131438349-13143842 1.0000 80 chr1:245955200-245955280 1.0000 80 chr10:69553253-69553333 1.0000 80 chr10:75415875-75415955 1.0000 80 chr6:52742132-52742212 1.0000 80 chr20:45882845-45882925 1.0000 80 chr1:16142233-16142313 1.0000 80 chr10:76875071-76875151 1.0000 80 chr5:10607274-10607354 1.0000 80 chr17:39949271-39949351 1.0000 80 chr17:42188610-42188690 1.0000 80 chr5:80802917-80802997 1.0000 80 chr18:60860271-60860351 1.0000 80 chr8:98811049-98811129 1.0000 80 chr12:111077744-11107782 1.0000 80 chr12:121652861-12165294 1.0000 80 chr3:152750831-152750911 1.0000 80 chr10:62588444-62588524 1.0000 80 chr18:8944032-8944112 1.0000 80 chr12:10047951-10048031 1.0000 80 chr18:46482315-46482395 1.0000 80 chr3:23781147-23781227 1.0000 80 chr12:52430717-52430797 1.0000 80 chr15:81384678-81384758 1.0000 80 chr17:27262856-27262936 1.0000 80 chr1:46639358-46639438 1.0000 80 chr1:207952520-207952600 1.0000 80 chr6:30781085-30781165 1.0000 80 chr4:159731178-159731258 1.0000 80 chr11:10737808-10737888 1.0000 80 chrX:2035540-2035620 1.0000 80 chr12:102099857-10209993 1.0000 80 chr12:90250381-90250461 1.0000 80 chr20:23314992-23315072 1.0000 80 chr17:49028100-49028180 1.0000 80 chr20:6015211-6015291 1.0000 80 chr10:11684759-11684839 1.0000 80 chr6:37153979-37154059 1.0000 80 chr10:134235060-13423514 1.0000 80 chr11:35052434-35052514 1.0000 80 chr2:217173475-217173555 1.0000 80 chr11:86222325-86222405 1.0000 80 chr19:4654827-4654907 1.0000 80 chr11:1569736-1569816 1.0000 80 chr19:252931-253011 1.0000 80 chr1:109913441-109913521 1.0000 80 chr11:5255886-5255966 1.0000 80 chr1:100643798-100643878 1.0000 80 chr5:140900887-140900967 1.0000 80 chr16:8041053-8041133 1.0000 80 chr11:123992969-12399304 1.0000 80 chr10:45474262-45474342 1.0000 80 chr12:52444860-52444940 1.0000 80 chr7:770913-770993 1.0000 80 chr1:234680500-234680580 1.0000 80 chr18:57544796-57544876 1.0000 80 chr7:115938268-115938348 1.0000 80 chr1:181100566-181100646 1.0000 80 chr6:157144072-157144152 1.0000 80 chr2:132399284-132399364 1.0000 80 chr10:77055212-77055292 1.0000 80 chr3:15724450-15724530 1.0000 80 chr3:151621373-151621453 1.0000 80 chr16:11828131-11828211 1.0000 80 chr15:85078222-85078302 1.0000 80 chr5:50280617-50280697 1.0000 80 chr9:101649225-101649305 1.0000 80 chr7:112125008-112125088 1.0000 80 chr19:2723231-2723311 1.0000 80 chr8:125029932-125030012 1.0000 80 chr11:35373914-35373994 1.0000 80 chr3:71591883-71591963 1.0000 80 chr10:97057308-97057388 1.0000 80 chr12:8191492-8191572 1.0000 80 chr12:76247459-76247539 1.0000 80 chr7:45030131-45030211 1.0000 80 chr4:25090417-25090497 1.0000 80 chr21:37470320-37470400 1.0000 80 chr22:28769959-28770039 1.0000 80 chr12:112432646-11243272 1.0000 80 chr19:17791159-17791239 1.0000 80 chr1:78548078-78548158 1.0000 80 chr2:202016199-202016279 1.0000 80 chr7:158503639-158503719 1.0000 80 chr20:52269009-52269089 1.0000 80 chr5:88081856-88081936 1.0000 80 chr11:86230454-86230534 1.0000 80 chr6:15434544-15434624 1.0000 80 chr8:28572437-28572517 1.0000 80 chr7:44297629-44297709 1.0000 80 chr3:67081361-67081441 1.0000 80 chr2:9748125-9748205 1.0000 80 chr4:79705513-79705593 1.0000 80 chr5:42586905-42586985 1.0000 80 chr3:186606453-186606533 1.0000 80 chr15:48843467-48843547 1.0000 80 chr2:178574739-178574819 1.0000 80 chr12:25062780-25062860 1.0000 80 chr8:87121007-87121087 1.0000 80 chr6:107974500-107974580 1.0000 80 chr11:5836886-5836966 1.0000 80 chr10:115785222-11578530 1.0000 80 chr5:61581345-61581425 1.0000 80 chr7:55661375-55661455 1.0000 80 chr21:30593890-30593970 1.0000 80 chr5:131094344-131094424 1.0000 80 chr7:47521834-47521914 1.0000 80 chr15:40391099-40391179 1.0000 80 chr1:10127231-10127311 1.0000 80 chr1:21900762-21900842 1.0000 80 chr12:121567069-12156714 1.0000 80 chr1:121324817-121324897 1.0000 80 chr6:16320354-16320434 1.0000 80 chr10:93861315-93861395 1.0000 80 chr6:68606560-68606640 1.0000 80 chr7:22687231-22687311 1.0000 80 chr5:148533617-148533697 1.0000 80 chr17:20937772-20937852 1.0000 80 chr13:42490865-42490945 1.0000 80 chr3:165877687-165877767 1.0000 80 chr12:71054830-71054910 1.0000 80 chr7:64205231-64205311 1.0000 80 chr1:109981596-109981676 1.0000 80 chr6:31527047-31527127 1.0000 80 chr2:231639444-231639524 1.0000 80 chr10:120255275-12025535 1.0000 80 chr1:235051861-235051941 1.0000 80 chr5:145022946-145023026 1.0000 80 chr7:131271115-131271195 1.0000 80 chr20:354224-354304 1.0000 80 chr1:201617128-201617208 1.0000 80 chr8:124526581-124526661 1.0000 80 chr1:65222981-65223061 1.0000 80 chr3:152769978-152770058 1.0000 80 chr8:42054201-42054281 1.0000 80 chr6:70861708-70861788 1.0000 80 chr2:153023285-153023365 1.0000 80 chr9:127321213-127321293 1.0000 80 chr8:97961963-97962043 1.0000 80 chr7:123427865-123427945 1.0000 80 chr12:102415434-10241551 1.0000 80 chr2:132426611-132426691 1.0000 80 chr22:24907356-24907436 1.0000 80 chr6:15736080-15736160 1.0000 80 chr2:205406458-205406538 1.0000 80 chr2:220143934-220144014 1.0000 80 chr6:17701148-17701228 1.0000 80 chr12:6277137-6277217 1.0000 80 chr11:107298704-10729878 1.0000 80 chr22:19631531-19631611 1.0000 80 chr1:160814377-160814457 1.0000 80 chr8:107282235-107282315 1.0000 80 chr3:73002864-73002944 1.0000 80 chr12:123210693-12321077 1.0000 80 chr2:8945564-8945644 1.0000 80 chr7:107877565-107877645 1.0000 80 chr1:16339317-16339397 1.0000 80 chrX:70393424-70393504 1.0000 80 chr6:4371817-4371897 1.0000 80 chr14:34122023-34122103 1.0000 80 chr15:67675214-67675294 1.0000 80 chr7:140206765-140206845 1.0000 80 chr1:43810068-43810148 1.0000 80 chr5:139365509-139365589 1.0000 80 chr7:75324195-75324275 1.0000 80 chr12:70886817-70886897 1.0000 80 chr3:45155267-45155347 1.0000 80 chr17:43242821-43242901 1.0000 80 chr3:156878625-156878705 1.0000 80 chr21:35855967-35856047 1.0000 80 chr3:196242219-196242299 1.0000 80 chr12:26451867-26451947 1.0000 80 chr8:42125404-42125484 1.0000 80 chr1:231242162-231242242 1.0000 80 chr1:230960850-230960930 1.0000 80 chr17:38085571-38085651 1.0000 80 chr8:126175767-126175847 1.0000 80 chr4:84463547-84463627 1.0000 80 chr1:224521830-224521910 1.0000 80 chr7:16387573-16387653 1.0000 80 chr2:9190436-9190516 1.0000 80 chr10:99600095-99600175 1.0000 80 chr10:106099414-10609949 1.0000 80 chr10:116394594-11639467 1.0000 80 chr14:69087015-69087095 1.0000 80 chr2:174075387-174075467 1.0000 80 chr5:90562302-90562382 1.0000 80 chr6:119487684-119487764 1.0000 80 chr1:6336557-6336637 1.0000 80 chr14:102394288-10239436 1.0000 80 chr12:40013740-40013820 1.0000 80 chr16:15262992-15263072 1.0000 80 chr22:46852251-46852331 1.0000 80 chr1:166672981-166673061 1.0000 80 chr10:119522330-11952241 1.0000 80 chr1:22301369-22301449 1.0000 80 chr9:80442419-80442499 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_MEF2D/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/MEF2D.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.29 C 0.206 G 0.222 T 0.282 Background letter frequencies (from file dataset with add-one prior applied): A 0.29 C 0.206 G 0.222 T 0.282 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CTAWWWWT MEME-1 width = 8 sites = 149 llr = 1094 E-value = 2.3e-101 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a4646: pos.-specific C a1:::::: probability G :::::::: matrix T :9:6464a bits 2.3 * 2.1 * 1.8 * * * 1.6 * * * Relative 1.4 *** * Entropy 1.1 *** * (10.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTATATAT consensus ATAT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr15:83755057-83755137 46 3.18e-05 ttgtggtttt ctatatat aggatcatgt chr2:174075387-174075467 11 9.53e-05 TGATGCATGA CTATAAAT AGCATGTTTG chr7:16387573-16387653 48 9.53e-05 agagaaggga ctataaat agctccccat chr4:84463547-84463627 69 9.53e-05 AGATTGGCCT CTATTTAT AGGC chr1:231242162-231242242 25 9.53e-05 CATATTTCAG CTATAAAT AGAACATGGC chr21:35855967-35856047 13 9.53e-05 agtcatagtt ctatttat atatcatgtg chr7:140206765-140206845 5 9.53e-05 Cgag ctataaat agctgttaag chr12:6277137-6277217 32 9.53e-05 aggtcaccag ctataaat agtccaaaga chr6:70861708-70861788 57 9.53e-05 CAGTGCTGCT CTATAAAT AGCCACTTAC chr1:235051861-235051941 28 9.53e-05 GTTTGCCCTG CTATTTAT AGAGCGATCA chr7:64205231-64205311 14 9.53e-05 TTGACAGCTG CTATTTAT AACTGTTTCA chr7:47521834-47521914 42 9.53e-05 ACCAGGATAA CTATTTAT AGCCTCTTGC chr12:25062780-25062860 3 9.53e-05 ag ctataaat agcccaaatc chr3:186606453-186606533 45 9.53e-05 TTTATTACTT CTATTTAT ATCATTGCGG chr8:28572437-28572517 42 9.53e-05 GAGCAAGTTA CTATTTAT ATTTTAAGAA chr19:17791159-17791239 22 9.53e-05 ACGCATGAGG CTATTTAT AGCGTGGGCG chr22:28769959-28770039 71 9.53e-05 GACATCTGAT CTATAAAT AG chr21:37470320-37470400 43 9.53e-05 tctcatgctg ctataaat aaataaccaa chr10:97057308-97057388 62 9.53e-05 CTGAAGCTGA CTATTTAT AGCATTTGAG chr8:125029932-125030012 39 9.53e-05 ATGTGAAAAT CTATTTAT ACTTTGTGGA chr19:2723231-2723311 52 9.53e-05 GCTGCGGCTG CTATTTAT AGCTCCCAGG chr3:151621373-151621453 14 9.53e-05 ttggatatgc ctatttat agccccttcc chr1:109913441-109913521 64 9.53e-05 TAGAACATGT CTATAAAT GGTTGGGAT chr11:1569736-1569816 26 9.53e-05 CTCTCCTTGG CTATTTAT AGCTGCGACC chr12:121652861-12165294 35 9.53e-05 TTTCCTGATT CTATAAAT AACAACACTG chr17:42188610-42188690 46 9.53e-05 AGGGCCCTGT CTATAAAT AGGTGGAGCA chr11:12039575-12039655 29 9.53e-05 CTCTTCTAAC CTATAAAT AGCCTGGTCA chr20:57483006-57483086 6 9.53e-05 ATGAT CTATTTAT AGAACTGTGG chr5:55354366-55354446 55 9.53e-05 ATGTTGAGTT CTATTTAT AGCTTCTGGT chr3:40665161-40665241 41 9.53e-05 TAGATATTGG CTATAAAT AGCTTCCCTT chr19:3451011-3451091 34 9.53e-05 GGAGTGACTG CTATAAAT AGTGAAAATA chr8:9182179-9182259 29 9.53e-05 TCAGTAAAGA CTATTTAT AGCTCTGATT chr17:56784150-56784230 71 9.53e-05 catggataat ctatttat ag chr2:109317815-109317895 63 9.53e-05 ATAAAGGCAT CTATAAAT ATCTGTGGCG chr5:7714435-7714515 16 9.53e-05 CTTTAAGAGT CTATTTAT AGAAGTTACG chr2:188847556-188847636 7 9.53e-05 ctcata ctataaat aagtgtccct chr12:70886817-70886897 49 1.59e-04 atggggtttt ctaaatat agaatcatgt chr5:139365509-139365589 56 1.59e-04 GCTCCCAGGG CTATATTT AGGCCACTGG chr1:65222981-65223061 29 1.59e-04 cccagtgtta ctatattt ggagatgggg chr5:145022946-145023026 48 1.59e-04 atcgggtttt ctaaatat agaatcatgt chr1:121324817-121324897 63 1.59e-04 atggagcttt ctaaatat agaatcatgt chr15:40391099-40391179 23 1.59e-04 GACTCAGAAG CTAAATAT AGCGAGCGAT chr21:30593890-30593970 36 1.59e-04 TGAGCGGTTA CTAAATAT ACCAAGCATG chr7:44297629-44297709 39 1.59e-04 TCACAGACAG CTAAATAT AGCGCTGCTT chr20:52269009-52269089 23 1.59e-04 AGGTCCTTTT CTAAATAT AGCAACGTCA chr6:157144072-157144152 28 1.59e-04 GCATTTTGAG CTATATTT AGACACCATC chr1:207952520-207952600 28 1.59e-04 gtggggtttt ctaaatat agaatcatgt chr12:15142890-15142970 43 1.59e-04 caacaggagt ctatattt agaaaacccc chr5:131456555-131456635 63 1.59e-04 tgacatgatt ctatattt agaaaatccc chr5:55798118-55798198 40 1.59e-04 TTCTTCCAGT CTAAATAT AGGCACAAAT chr6:119487684-119487764 47 1.91e-04 cattgcatat ctattaat agttcatgct chr5:90562302-90562382 35 1.91e-04 TCAGGCTGTT CTATTAAT AGAAAGTGAA chr17:38085571-38085651 28 1.91e-04 atgtcatgca ctattaat aactcctgtt chr2:178574739-178574819 57 1.91e-04 ggagctgttt ctattaat aggatgcaga chr1:22301369-22301449 65 3.18e-04 GAGGGCATGG CTATTTTT ATCACAGT chr10:119522330-11952241 27 3.18e-04 TGTAACATAC CTATTTTT GGCAGACTTG chr12:40013740-40013820 47 3.18e-04 GTTAAAATGT CTATTTTT GGAGAGGTCG chr1:6336557-6336637 55 3.18e-04 GGGAAGGGAG CTAAAAAT AGACAGGAGG chr10:106099414-10609949 20 3.18e-04 AGAAAATGTT CTAAAAAT AGACTCCCTG chr10:99600095-99600175 64 3.18e-04 TGCCCTTGTT CTATTTTT AGGGCAGGT chr1:224521830-224521910 54 3.18e-04 agtcagagtt ctattttt gcatttggtc chr1:230960850-230960930 8 3.18e-04 AGAAAAT CTAAAAAT AGCTACATGA chr7:75324195-75324275 60 3.18e-04 ccacaacatt ctattttt gttttatgag chr1:43810068-43810148 50 3.18e-04 tttgcctatc ctattttt agttcaaaac chr1:16339317-16339397 67 3.18e-04 aatggggcgg ctataatt ACTCTT chr7:107877565-107877645 9 3.18e-04 AAAACTGA CTATTTTT AAACTAGGTG chr8:107282235-107282315 34 3.18e-04 TCCGCAGGAG CTATTTTT AGCGGTGCGT chr22:19631531-19631611 41 3.18e-04 GATAAGGATG CTATTTTT ATTGGCTTAT chr11:107298704-10729878 68 3.18e-04 TCATTTGGTG CTATTTTT AAACA chr12:102415434-10241551 16 3.18e-04 AGTAAAAACC CTATTTTT GGATGTCCAG chr1:109981596-109981676 43 3.18e-04 ttcttaggaa ctattttt agccagtgac chr6:68606560-68606640 51 3.18e-04 AACACTGGGT CTAAAAAT AACAACAATC chr6:16320354-16320434 30 3.18e-04 AGGGCCTCGG CTATTTTT AGGTACCAGC chr1:10127231-10127311 6 3.18e-04 TGAAT CTATTTTT AGTTCATCAG chr11:5836886-5836966 32 3.18e-04 aaaattaaaa ctaaaaat agcatatgat chr4:79705513-79705593 53 3.18e-04 CCACAGCCTG CTATTTTT AGGGGACTAA chr5:88081856-88081936 25 3.18e-04 AAGCAGTTTT CTATTTTT AGACAACTAC chr2:202016199-202016279 51 3.18e-04 TGGTCGTGTC CTATTTTT GGTTAGATGT chr1:78548078-78548158 28 3.18e-04 GATAGAATGG CTATTTTT AGCTCTGCAA chr7:45030131-45030211 46 3.18e-04 TATCAGAATA CTAAAAAT AACTTTCTTC chr12:76247459-76247539 11 3.18e-04 GAGAAAAAGG CTATTTTT ACCCCTGGGT chr12:8191492-8191572 14 3.18e-04 TCCAGAGTGG CTATTTTT AGCCAGGCTA chr3:71591883-71591963 13 3.18e-04 GAAGGCTGGC CTAAAAAT AGACACATAC chr11:35373914-35373994 63 3.18e-04 GCAGTTAGCA CTATTTTT GGCTGGCAGG chr7:112125008-112125088 40 3.18e-04 TCTAGGCTAC CTAAAAAT AGCCACTGCT chr5:50280617-50280697 3 3.18e-04 CC CTATTTTT AACTTCCCTA chr7:770913-770993 36 3.18e-04 CCGTCACTGT CTAAAAAT ACCATCACTG chr12:52444860-52444940 68 3.18e-04 CTGGGAGCTG CTATTTTT AGCGG chr11:123992969-12399304 15 3.18e-04 TCACTTGCTT CTAAAAAT AGTCACAGCT chr16:8041053-8041133 64 3.18e-04 tgcggcagtt ctattttt agttttttg chr11:5255886-5255966 63 3.18e-04 GCAGTTGTTT CTAAAAAT ATCCTCCTAG chr2:217173475-217173555 23 3.18e-04 TTAACCTGAG CTAAAAAT AGAAAGCCAC chr11:35052434-35052514 31 3.18e-04 CATCAGGCTT CTAATTAT AACTCGTCCT chr6:37153979-37154059 69 3.18e-04 tatgatagtt ctattttt ggtt chr6:30781085-30781165 7 3.18e-04 GCTGTC CTATTTTT AGATATCATG chr1:46639358-46639438 48 3.18e-04 GCAGATACAG CTAAAAAT AGCTGGAAGA chr3:23781147-23781227 12 3.18e-04 GGCAGGTTCT CTAAAAAT AGAGGATTTA chr10:62588444-62588524 16 3.18e-04 cctcaaaagg ctaaaaat agaactacca chr12:111077744-11107782 57 3.18e-04 tgtattagta ctattttt agggatgagt chr8:98811049-98811129 48 3.18e-04 GATGGATAAG CTAAAAAT AGGATTATCT chr10:76875071-76875151 72 3.18e-04 AAGATGTTAA CTAAAAAT A chr6:52742132-52742212 45 3.18e-04 ACCACTGATG CTAAAAAT AGGGTTTGCT chr10:75415875-75415955 67 3.18e-04 ACTCCTAGAG CTAATTAT AGTACA chr16:77730206-77730286 52 3.18e-04 AGCACTGCCA CTAAAAAT AGCCCAAGAG chr11:66185846-66185926 64 3.18e-04 TGCTGCCAAG CTATTTTT GGTTCTGCA chr16:25225078-25225158 71 3.18e-04 GAGAACAGGG CTAAAAAT AA chr12:45718357-45718437 12 3.18e-04 AGCTGAAAAG CTAAAAAT AGCCCAGGGC chr8:23218206-23218286 36 3.18e-04 gtcacagtTA CTAAAAAT AGtgatgatg chr2:240162277-240162357 13 3.18e-04 GCTTGAGAAT CTATTTTT GGAAACCCTG chr11:34631012-34631092 68 3.18e-04 gaaagatgag ctattttt atcct chr6:110711118-110711198 27 3.18e-04 ggccagagtt ctattttt atatgtggtc chr10:52020646-52020726 27 3.18e-04 ATAACCACTG CTAAAAAT AGTTTCTGTT chr6:46405534-46405614 24 3.18e-04 ATGGAGCTGC CTAAAAAT AATGATGACT chr4:7833176-7833256 3 3.18e-04 TT CTATAATT AGCTAAGTGC chr6:66171157-66171237 20 3.18e-04 ctgataagca ctattttt agcactttag chrX:2619849-2619929 12 3.18e-04 GGGGCTGGGG CTATTTTT GGCAGAGCGT chr2:108977690-108977770 49 3.18e-04 gaaaaaagtt ctaaaaat agagctgata chr10:134330912-13433099 38 3.18e-04 CCAGGGGACT CTAAAAAT AGCCTGCGCT chr9:80442419-80442499 1 3.50e-04 . CTAAATTT AGCCCCTACT chr14:102394288-10239436 42 3.50e-04 CATCATGAAA CTAAATTT AGCCATGGTG chr3:15724450-15724530 59 3.50e-04 TGCTTAGAGT CTAAATTT AGCAGTGATA chr1:168583087-168583167 5 3.50e-04 GCCG CTAAATTT AGCTCTTCCA chr6:15736080-15736160 31 4.13e-04 taaatgcatg ctattatt agcacagcag chr3:165877687-165877767 65 4.13e-04 TTGCGGGTTT CTATTATT AGATCCAC chr20:23314992-23315072 33 4.13e-04 GTTGGGGAGT CTATTATT AGGTCAGGGG chr3:45155267-45155347 31 4.77e-04 ACTAACGTGA CTAAAATT AGACTTTGCG chr22:24907356-24907436 56 4.77e-04 tgaaaatgtt ctaaaatt agatagtggt chr6:31527047-31527127 73 4.77e-04 ATTTCAGTTG CTAAAATT chr2:9748125-9748205 20 4.77e-04 ccAAATGTTA CTAATTTT AGAGCAATAA chr10:77055212-77055292 38 4.77e-04 TTCTTCTGAT CTAATTTT GGAACATGAA chr1:100643798-100643878 24 4.77e-04 CAGCCTAGTT CTAATTTT AGTTCATGGA chr19:252931-253011 65 4.77e-04 aagtagatgt ctaaaatt aaccatca chr15:81384678-81384758 8 4.77e-04 GTTGTTG CTAAAATT AGAACCAGGC chr1:245955200-245955280 42 4.77e-04 TTTAAACATT CTAATTTT AAACTtgtgt chr15:31645817-31645897 9 4.77e-04 GCCTCTTG CTAATTTT AGCTTCTGAT chr3:196242219-196242299 41 6.25e-04 GCCTGCAGAT CCAAATAT AGTTTCAAAG chr3:156878625-156878705 29 7.41e-04 TCCCTAGTTT CCAAAAAT AGTCTTAGGG chr2:8945564-8945644 7 7.41e-04 aacttt ccaaaaat aacctcatta chr7:123427865-123427945 60 7.41e-04 GCAGGGAAAT CCAAAAAT AGCATTAAGC chr1:21900762-21900842 16 7.41e-04 ttatgtgaag ccaaaaat agcatctgtc chr16:11828131-11828211 70 7.41e-04 CTGTGTGTTT CCAAAAAT AAA chr7:115938268-115938348 69 7.41e-04 attgtagctc ccataatt ccct chr10:45474262-45474342 61 7.41e-04 GTCACGAGGG CCAAAAAT AGCCTGCTCG chr1:16142233-16142313 23 7.41e-04 TATCTGAGAC CCAAAAAT AGAGTGAATA chr18:10593779-10593859 17 7.41e-04 AGAGGAGAAT CCAAAAAT AGCATCAGGT chr18:11917051-11917131 9 7.41e-04 AGGAGAAT CCAAAAAT AGCATCAGGT chr9:101649225-101649305 32 7.64e-04 TCTAGTTGTT CCAAATTT AGAGCAGAAA chr20:37614330-37614410 68 7.64e-04 CATCTTAGTT CCAAATTT GTAGC chr8:97961963-97962043 25 8.57e-04 CTCCAGTGAG CCAATTTT AGATTCTCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:83755057-83755137 3.2e-05 45_[+1]_27 chr2:174075387-174075467 9.5e-05 10_[+1]_62 chr7:16387573-16387653 9.5e-05 47_[+1]_25 chr4:84463547-84463627 9.5e-05 68_[+1]_4 chr1:231242162-231242242 9.5e-05 24_[+1]_48 chr21:35855967-35856047 9.5e-05 12_[+1]_60 chr7:140206765-140206845 9.5e-05 4_[+1]_68 chr12:6277137-6277217 9.5e-05 31_[+1]_41 chr6:70861708-70861788 9.5e-05 56_[+1]_16 chr1:235051861-235051941 9.5e-05 27_[+1]_45 chr7:64205231-64205311 9.5e-05 13_[+1]_59 chr7:47521834-47521914 9.5e-05 41_[+1]_31 chr12:25062780-25062860 9.5e-05 2_[+1]_70 chr3:186606453-186606533 9.5e-05 44_[+1]_28 chr8:28572437-28572517 9.5e-05 41_[+1]_31 chr19:17791159-17791239 9.5e-05 21_[+1]_51 chr22:28769959-28770039 9.5e-05 70_[+1]_2 chr21:37470320-37470400 9.5e-05 42_[+1]_30 chr10:97057308-97057388 9.5e-05 61_[+1]_11 chr8:125029932-125030012 9.5e-05 38_[+1]_34 chr19:2723231-2723311 9.5e-05 51_[+1]_21 chr3:151621373-151621453 9.5e-05 13_[+1]_59 chr1:109913441-109913521 9.5e-05 63_[+1]_9 chr11:1569736-1569816 9.5e-05 25_[+1]_47 chr12:121652861-12165294 9.5e-05 34_[+1]_38 chr17:42188610-42188690 9.5e-05 45_[+1]_27 chr11:12039575-12039655 9.5e-05 28_[+1]_44 chr20:57483006-57483086 9.5e-05 5_[+1]_67 chr5:55354366-55354446 9.5e-05 54_[+1]_18 chr3:40665161-40665241 9.5e-05 40_[+1]_32 chr19:3451011-3451091 9.5e-05 33_[+1]_39 chr8:9182179-9182259 9.5e-05 28_[+1]_44 chr17:56784150-56784230 9.5e-05 70_[+1]_2 chr2:109317815-109317895 9.5e-05 62_[+1]_10 chr5:7714435-7714515 9.5e-05 15_[+1]_57 chr2:188847556-188847636 9.5e-05 6_[+1]_66 chr12:70886817-70886897 0.00016 48_[+1]_24 chr5:139365509-139365589 0.00016 55_[+1]_17 chr1:65222981-65223061 0.00016 28_[+1]_44 chr5:145022946-145023026 0.00016 47_[+1]_25 chr1:121324817-121324897 0.00016 62_[+1]_10 chr15:40391099-40391179 0.00016 22_[+1]_50 chr21:30593890-30593970 0.00016 35_[+1]_37 chr7:44297629-44297709 0.00016 38_[+1]_34 chr20:52269009-52269089 0.00016 22_[+1]_50 chr6:157144072-157144152 0.00016 27_[+1]_45 chr1:207952520-207952600 0.00016 27_[+1]_45 chr12:15142890-15142970 0.00016 42_[+1]_30 chr5:131456555-131456635 0.00016 62_[+1]_10 chr5:55798118-55798198 0.00016 39_[+1]_33 chr6:119487684-119487764 0.00019 46_[+1]_26 chr5:90562302-90562382 0.00019 34_[+1]_38 chr17:38085571-38085651 0.00019 27_[+1]_45 chr2:178574739-178574819 0.00019 56_[+1]_16 chr1:22301369-22301449 0.00032 64_[+1]_8 chr10:119522330-11952241 0.00032 26_[+1]_46 chr12:40013740-40013820 0.00032 46_[+1]_26 chr1:6336557-6336637 0.00032 54_[+1]_18 chr10:106099414-10609949 0.00032 19_[+1]_53 chr10:99600095-99600175 0.00032 63_[+1]_9 chr1:224521830-224521910 0.00032 53_[+1]_19 chr1:230960850-230960930 0.00032 7_[+1]_65 chr7:75324195-75324275 0.00032 59_[+1]_13 chr1:43810068-43810148 0.00032 49_[+1]_23 chr1:16339317-16339397 0.00032 66_[+1]_6 chr7:107877565-107877645 0.00032 8_[+1]_64 chr8:107282235-107282315 0.00032 33_[+1]_39 chr22:19631531-19631611 0.00032 40_[+1]_32 chr11:107298704-10729878 0.00032 67_[+1]_5 chr12:102415434-10241551 0.00032 15_[+1]_57 chr1:109981596-109981676 0.00032 42_[+1]_30 chr6:68606560-68606640 0.00032 50_[+1]_22 chr6:16320354-16320434 0.00032 29_[+1]_43 chr1:10127231-10127311 0.00032 5_[+1]_67 chr11:5836886-5836966 0.00032 31_[+1]_41 chr4:79705513-79705593 0.00032 52_[+1]_20 chr5:88081856-88081936 0.00032 24_[+1]_48 chr2:202016199-202016279 0.00032 50_[+1]_22 chr1:78548078-78548158 0.00032 27_[+1]_45 chr7:45030131-45030211 0.00032 45_[+1]_27 chr12:76247459-76247539 0.00032 10_[+1]_62 chr12:8191492-8191572 0.00032 13_[+1]_59 chr3:71591883-71591963 0.00032 12_[+1]_60 chr11:35373914-35373994 0.00032 62_[+1]_10 chr7:112125008-112125088 0.00032 39_[+1]_33 chr5:50280617-50280697 0.00032 2_[+1]_70 chr7:770913-770993 0.00032 35_[+1]_37 chr12:52444860-52444940 0.00032 67_[+1]_5 chr11:123992969-12399304 0.00032 14_[+1]_58 chr16:8041053-8041133 0.00032 63_[+1]_9 chr11:5255886-5255966 0.00032 62_[+1]_10 chr2:217173475-217173555 0.00032 22_[+1]_50 chr11:35052434-35052514 0.00032 30_[+1]_42 chr6:37153979-37154059 0.00032 68_[+1]_4 chr6:30781085-30781165 0.00032 6_[+1]_66 chr1:46639358-46639438 0.00032 47_[+1]_25 chr3:23781147-23781227 0.00032 11_[+1]_61 chr10:62588444-62588524 0.00032 15_[+1]_57 chr12:111077744-11107782 0.00032 56_[+1]_16 chr8:98811049-98811129 0.00032 47_[+1]_25 chr10:76875071-76875151 0.00032 71_[+1]_1 chr6:52742132-52742212 0.00032 44_[+1]_28 chr10:75415875-75415955 0.00032 66_[+1]_6 chr16:77730206-77730286 0.00032 51_[+1]_21 chr11:66185846-66185926 0.00032 63_[+1]_9 chr16:25225078-25225158 0.00032 70_[+1]_2 chr12:45718357-45718437 0.00032 11_[+1]_61 chr8:23218206-23218286 0.00032 35_[+1]_37 chr2:240162277-240162357 0.00032 12_[+1]_60 chr11:34631012-34631092 0.00032 67_[+1]_5 chr6:110711118-110711198 0.00032 26_[+1]_46 chr10:52020646-52020726 0.00032 26_[+1]_46 chr6:46405534-46405614 0.00032 23_[+1]_49 chr4:7833176-7833256 0.00032 2_[+1]_70 chr6:66171157-66171237 0.00032 19_[+1]_53 chrX:2619849-2619929 0.00032 11_[+1]_61 chr2:108977690-108977770 0.00032 48_[+1]_24 chr10:134330912-13433099 0.00032 37_[+1]_35 chr9:80442419-80442499 0.00035 [+1]_72 chr14:102394288-10239436 0.00035 41_[+1]_31 chr3:15724450-15724530 0.00035 58_[+1]_14 chr1:168583087-168583167 0.00035 4_[+1]_68 chr6:15736080-15736160 0.00041 30_[+1]_42 chr3:165877687-165877767 0.00041 64_[+1]_8 chr20:23314992-23315072 0.00041 32_[+1]_40 chr3:45155267-45155347 0.00048 30_[+1]_42 chr22:24907356-24907436 0.00048 55_[+1]_17 chr6:31527047-31527127 0.00048 72_[+1] chr2:9748125-9748205 0.00048 19_[+1]_53 chr10:77055212-77055292 0.00048 37_[+1]_35 chr1:100643798-100643878 0.00048 23_[+1]_49 chr19:252931-253011 0.00048 64_[+1]_8 chr15:81384678-81384758 0.00048 7_[+1]_65 chr1:245955200-245955280 0.00048 41_[+1]_31 chr15:31645817-31645897 0.00048 8_[+1]_64 chr3:196242219-196242299 0.00062 40_[+1]_32 chr3:156878625-156878705 0.00074 28_[+1]_44 chr2:8945564-8945644 0.00074 6_[+1]_66 chr7:123427865-123427945 0.00074 59_[+1]_13 chr1:21900762-21900842 0.00074 15_[+1]_57 chr16:11828131-11828211 0.00074 69_[+1]_3 chr7:115938268-115938348 0.00074 68_[+1]_4 chr10:45474262-45474342 0.00074 60_[+1]_12 chr1:16142233-16142313 0.00074 22_[+1]_50 chr18:10593779-10593859 0.00074 16_[+1]_56 chr18:11917051-11917131 0.00074 8_[+1]_64 chr9:101649225-101649305 0.00076 31_[+1]_41 chr20:37614330-37614410 0.00076 67_[+1]_5 chr8:97961963-97962043 0.00086 24_[+1]_48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTAWWWWT width=8 seqs=149 chr15:83755057-83755137 ( 46) CTATATAT 1 chr2:174075387-174075467 ( 11) CTATAAAT 1 chr7:16387573-16387653 ( 48) CTATAAAT 1 chr4:84463547-84463627 ( 69) CTATTTAT 1 chr1:231242162-231242242 ( 25) CTATAAAT 1 chr21:35855967-35856047 ( 13) CTATTTAT 1 chr7:140206765-140206845 ( 5) CTATAAAT 1 chr12:6277137-6277217 ( 32) CTATAAAT 1 chr6:70861708-70861788 ( 57) CTATAAAT 1 chr1:235051861-235051941 ( 28) CTATTTAT 1 chr7:64205231-64205311 ( 14) CTATTTAT 1 chr7:47521834-47521914 ( 42) CTATTTAT 1 chr12:25062780-25062860 ( 3) CTATAAAT 1 chr3:186606453-186606533 ( 45) CTATTTAT 1 chr8:28572437-28572517 ( 42) CTATTTAT 1 chr19:17791159-17791239 ( 22) CTATTTAT 1 chr22:28769959-28770039 ( 71) CTATAAAT 1 chr21:37470320-37470400 ( 43) CTATAAAT 1 chr10:97057308-97057388 ( 62) CTATTTAT 1 chr8:125029932-125030012 ( 39) CTATTTAT 1 chr19:2723231-2723311 ( 52) CTATTTAT 1 chr3:151621373-151621453 ( 14) CTATTTAT 1 chr1:109913441-109913521 ( 64) CTATAAAT 1 chr11:1569736-1569816 ( 26) CTATTTAT 1 chr12:121652861-12165294 ( 35) CTATAAAT 1 chr17:42188610-42188690 ( 46) CTATAAAT 1 chr11:12039575-12039655 ( 29) CTATAAAT 1 chr20:57483006-57483086 ( 6) CTATTTAT 1 chr5:55354366-55354446 ( 55) CTATTTAT 1 chr3:40665161-40665241 ( 41) CTATAAAT 1 chr19:3451011-3451091 ( 34) CTATAAAT 1 chr8:9182179-9182259 ( 29) CTATTTAT 1 chr17:56784150-56784230 ( 71) CTATTTAT 1 chr2:109317815-109317895 ( 63) CTATAAAT 1 chr5:7714435-7714515 ( 16) CTATTTAT 1 chr2:188847556-188847636 ( 7) CTATAAAT 1 chr12:70886817-70886897 ( 49) CTAAATAT 1 chr5:139365509-139365589 ( 56) CTATATTT 1 chr1:65222981-65223061 ( 29) CTATATTT 1 chr5:145022946-145023026 ( 48) CTAAATAT 1 chr1:121324817-121324897 ( 63) CTAAATAT 1 chr15:40391099-40391179 ( 23) CTAAATAT 1 chr21:30593890-30593970 ( 36) CTAAATAT 1 chr7:44297629-44297709 ( 39) CTAAATAT 1 chr20:52269009-52269089 ( 23) CTAAATAT 1 chr6:157144072-157144152 ( 28) CTATATTT 1 chr1:207952520-207952600 ( 28) CTAAATAT 1 chr12:15142890-15142970 ( 43) CTATATTT 1 chr5:131456555-131456635 ( 63) CTATATTT 1 chr5:55798118-55798198 ( 40) CTAAATAT 1 chr6:119487684-119487764 ( 47) CTATTAAT 1 chr5:90562302-90562382 ( 35) CTATTAAT 1 chr17:38085571-38085651 ( 28) CTATTAAT 1 chr2:178574739-178574819 ( 57) CTATTAAT 1 chr1:22301369-22301449 ( 65) CTATTTTT 1 chr10:119522330-11952241 ( 27) CTATTTTT 1 chr12:40013740-40013820 ( 47) CTATTTTT 1 chr1:6336557-6336637 ( 55) CTAAAAAT 1 chr10:106099414-10609949 ( 20) CTAAAAAT 1 chr10:99600095-99600175 ( 64) CTATTTTT 1 chr1:224521830-224521910 ( 54) CTATTTTT 1 chr1:230960850-230960930 ( 8) CTAAAAAT 1 chr7:75324195-75324275 ( 60) CTATTTTT 1 chr1:43810068-43810148 ( 50) CTATTTTT 1 chr1:16339317-16339397 ( 67) CTATAATT 1 chr7:107877565-107877645 ( 9) CTATTTTT 1 chr8:107282235-107282315 ( 34) CTATTTTT 1 chr22:19631531-19631611 ( 41) CTATTTTT 1 chr11:107298704-10729878 ( 68) CTATTTTT 1 chr12:102415434-10241551 ( 16) CTATTTTT 1 chr1:109981596-109981676 ( 43) CTATTTTT 1 chr6:68606560-68606640 ( 51) CTAAAAAT 1 chr6:16320354-16320434 ( 30) CTATTTTT 1 chr1:10127231-10127311 ( 6) CTATTTTT 1 chr11:5836886-5836966 ( 32) CTAAAAAT 1 chr4:79705513-79705593 ( 53) CTATTTTT 1 chr5:88081856-88081936 ( 25) CTATTTTT 1 chr2:202016199-202016279 ( 51) CTATTTTT 1 chr1:78548078-78548158 ( 28) CTATTTTT 1 chr7:45030131-45030211 ( 46) CTAAAAAT 1 chr12:76247459-76247539 ( 11) CTATTTTT 1 chr12:8191492-8191572 ( 14) CTATTTTT 1 chr3:71591883-71591963 ( 13) CTAAAAAT 1 chr11:35373914-35373994 ( 63) CTATTTTT 1 chr7:112125008-112125088 ( 40) CTAAAAAT 1 chr5:50280617-50280697 ( 3) CTATTTTT 1 chr7:770913-770993 ( 36) CTAAAAAT 1 chr12:52444860-52444940 ( 68) CTATTTTT 1 chr11:123992969-12399304 ( 15) CTAAAAAT 1 chr16:8041053-8041133 ( 64) CTATTTTT 1 chr11:5255886-5255966 ( 63) CTAAAAAT 1 chr2:217173475-217173555 ( 23) CTAAAAAT 1 chr11:35052434-35052514 ( 31) CTAATTAT 1 chr6:37153979-37154059 ( 69) CTATTTTT 1 chr6:30781085-30781165 ( 7) CTATTTTT 1 chr1:46639358-46639438 ( 48) CTAAAAAT 1 chr3:23781147-23781227 ( 12) CTAAAAAT 1 chr10:62588444-62588524 ( 16) CTAAAAAT 1 chr12:111077744-11107782 ( 57) CTATTTTT 1 chr8:98811049-98811129 ( 48) CTAAAAAT 1 chr10:76875071-76875151 ( 72) CTAAAAAT 1 chr6:52742132-52742212 ( 45) CTAAAAAT 1 chr10:75415875-75415955 ( 67) CTAATTAT 1 chr16:77730206-77730286 ( 52) CTAAAAAT 1 chr11:66185846-66185926 ( 64) CTATTTTT 1 chr16:25225078-25225158 ( 71) CTAAAAAT 1 chr12:45718357-45718437 ( 12) CTAAAAAT 1 chr8:23218206-23218286 ( 36) CTAAAAAT 1 chr2:240162277-240162357 ( 13) CTATTTTT 1 chr11:34631012-34631092 ( 68) CTATTTTT 1 chr6:110711118-110711198 ( 27) CTATTTTT 1 chr10:52020646-52020726 ( 27) CTAAAAAT 1 chr6:46405534-46405614 ( 24) CTAAAAAT 1 chr4:7833176-7833256 ( 3) CTATAATT 1 chr6:66171157-66171237 ( 20) CTATTTTT 1 chrX:2619849-2619929 ( 12) CTATTTTT 1 chr2:108977690-108977770 ( 49) CTAAAAAT 1 chr10:134330912-13433099 ( 38) CTAAAAAT 1 chr9:80442419-80442499 ( 1) CTAAATTT 1 chr14:102394288-10239436 ( 42) CTAAATTT 1 chr3:15724450-15724530 ( 59) CTAAATTT 1 chr1:168583087-168583167 ( 5) CTAAATTT 1 chr6:15736080-15736160 ( 31) CTATTATT 1 chr3:165877687-165877767 ( 65) CTATTATT 1 chr20:23314992-23315072 ( 33) CTATTATT 1 chr3:45155267-45155347 ( 31) CTAAAATT 1 chr22:24907356-24907436 ( 56) CTAAAATT 1 chr6:31527047-31527127 ( 73) CTAAAATT 1 chr2:9748125-9748205 ( 20) CTAATTTT 1 chr10:77055212-77055292 ( 38) CTAATTTT 1 chr1:100643798-100643878 ( 24) CTAATTTT 1 chr19:252931-253011 ( 65) CTAAAATT 1 chr15:81384678-81384758 ( 8) CTAAAATT 1 chr1:245955200-245955280 ( 42) CTAATTTT 1 chr15:31645817-31645897 ( 9) CTAATTTT 1 chr3:196242219-196242299 ( 41) CCAAATAT 1 chr3:156878625-156878705 ( 29) CCAAAAAT 1 chr2:8945564-8945644 ( 7) CCAAAAAT 1 chr7:123427865-123427945 ( 60) CCAAAAAT 1 chr1:21900762-21900842 ( 16) CCAAAAAT 1 chr16:11828131-11828211 ( 70) CCAAAAAT 1 chr7:115938268-115938348 ( 69) CCATAATT 1 chr10:45474262-45474342 ( 61) CCAAAAAT 1 chr1:16142233-16142313 ( 23) CCAAAAAT 1 chr18:10593779-10593859 ( 17) CCAAAAAT 1 chr18:11917051-11917131 ( 9) CCAAAAAT 1 chr9:101649225-101649305 ( 32) CCAAATTT 1 chr20:37614330-37614410 ( 68) CCAAATTT 1 chr8:97961963-97962043 ( 25) CCAATTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.80934 E= 2.3e-101 -1386 228 -1386 -1386 -1386 -113 -1386 168 179 -1386 -1386 -1386 57 -1386 -1386 102 93 -1386 -1386 67 64 -1386 -1386 96 101 -1386 -1386 56 -1386 -1386 -1386 183 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 149 E= 2.3e-101 0.000000 1.000000 0.000000 0.000000 0.000000 0.093960 0.000000 0.906040 1.000000 0.000000 0.000000 0.000000 0.429530 0.000000 0.000000 0.570470 0.550336 0.000000 0.000000 0.449664 0.449664 0.000000 0.000000 0.550336 0.583893 0.000000 0.000000 0.416107 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTAWWWWT MEME-1 regular expression -------------------------------------------------------------------------------- CTA[TA][AT][TA][AT]T -------------------------------------------------------------------------------- Time 5.02 secs. ******************************************************************************** ******************************************************************************** MOTIF TGASTCAT MEME-2 width = 8 sites = 30 llr = 267 E-value = 3.1e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::a:::a1 pos.-specific C :::5:a:2 probability G :a:5:::2 matrix T a::1a::5 bits 2.3 * * 2.1 * * 1.8 *** *** 1.6 *** *** Relative 1.4 *** *** Entropy 1.1 *** *** (12.8 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel TGACTCAT consensus G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:6277137-6277217 11 1.78e-05 atcatggggg tgactcat ctgaggtcac chr10:120255275-12025535 22 1.78e-05 acaagactcc tgactcat ggaaattgtg chr2:231639444-231639524 19 1.78e-05 CATTTAACAG TGACTCAT GGTTACTAAA chr19:2723231-2723311 2 1.78e-05 C TGACTCAT GCGTAGGAGA chr11:35052434-35052514 16 1.78e-05 CCATGAGCTC TGACTCAT CAGGCTTCTA chr12:102099857-10209993 3 1.78e-05 gg tgactcat gcctgtaatc chr5:55354366-55354446 72 1.78e-05 TAGCTTCTGG TGACTCAT T chr3:156966535-156966615 19 1.78e-05 ggggaaactc tgactcat gaatctgatt chr5:90562302-90562382 18 3.69e-05 ATGTGCAAAA TGAGTCAT CAGGCTGTTC chr21:35855967-35856047 1 3.69e-05 . tgagtcat agttctattt chr13:42490865-42490945 29 3.69e-05 CAAGAAAACA TGAGTCAT ACTTAAAAGC chr7:22687231-22687311 27 3.69e-05 agtgtatcca tgagtcat gctttatctc chr5:140900887-140900967 24 3.69e-05 GAGATAAAGT TGAGTCAT TAAAACCACA chr12:111077744-11107782 70 3.69e-05 tttttaggga tgagtcat atg chr2:174075387-174075467 51 5.09e-05 ATTCCCCCCC TGACTCAG CGGAGATTTA chr15:40391099-40391179 12 5.09e-05 GCCACGCTGA TGACTCAG AAGCTAAATA chr11:5255886-5255966 1 5.09e-05 . TGACTCAG AAACCCTGTT chr1:224521830-224521910 42 7.90e-05 ctgcagattg tgagtcag agttctattt chr5:139365509-139365589 1 7.90e-05 . tgagtcag tgtgcaagcc chr7:44297629-44297709 25 7.90e-05 GGAACAGCAC TGACTCAC AGACAGCTAA chr21:37470320-37470400 24 7.90e-05 aCGGTCtgta tgagtcag ttctcatgct chr1:230960850-230960930 23 9.29e-05 AATAGCTACA TGAGTCAC CAGTCAGGAG chr7:64205231-64205311 41 9.29e-05 ATAAGCCTGC TGAGTCAC AGGGGCAGAT chr3:23781147-23781227 68 9.29e-05 ATCATGACCA TGAGTCAC ATTTA chr10:134330912-13433099 8 9.29e-05 GCCTGGC TGAGTCAC ATGGGGGCTG chr7:55661375-55661455 43 1.11e-04 AGAATAGTCA TGACTCAA GGGTCATTTA chr6:46405534-46405614 37 1.11e-04 AAAATAATGA TGACTCAA CACCTAGAGG chr7:123427865-123427945 40 1.31e-04 TTAACCATGG TGAGTCAA CAGCAGGGAA chr16:8041053-8041133 47 1.55e-04 gtggaattgc tgattcat gcggcagttc chr19:252931-253011 2 1.55e-04 C TGATTCAT GGCTgaaatc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:6277137-6277217 1.8e-05 10_[+2]_62 chr10:120255275-12025535 1.8e-05 21_[+2]_51 chr2:231639444-231639524 1.8e-05 18_[+2]_54 chr19:2723231-2723311 1.8e-05 1_[+2]_71 chr11:35052434-35052514 1.8e-05 15_[+2]_57 chr12:102099857-10209993 1.8e-05 2_[+2]_70 chr5:55354366-55354446 1.8e-05 71_[+2]_1 chr3:156966535-156966615 1.8e-05 18_[+2]_54 chr5:90562302-90562382 3.7e-05 17_[+2]_55 chr21:35855967-35856047 3.7e-05 [+2]_72 chr13:42490865-42490945 3.7e-05 28_[+2]_44 chr7:22687231-22687311 3.7e-05 26_[+2]_46 chr5:140900887-140900967 3.7e-05 23_[+2]_49 chr12:111077744-11107782 3.7e-05 69_[+2]_3 chr2:174075387-174075467 5.1e-05 50_[+2]_22 chr15:40391099-40391179 5.1e-05 11_[+2]_61 chr11:5255886-5255966 5.1e-05 [+2]_72 chr1:224521830-224521910 7.9e-05 41_[+2]_31 chr5:139365509-139365589 7.9e-05 [+2]_72 chr7:44297629-44297709 7.9e-05 24_[+2]_48 chr21:37470320-37470400 7.9e-05 23_[+2]_49 chr1:230960850-230960930 9.3e-05 22_[+2]_50 chr7:64205231-64205311 9.3e-05 40_[+2]_32 chr3:23781147-23781227 9.3e-05 67_[+2]_5 chr10:134330912-13433099 9.3e-05 7_[+2]_65 chr7:55661375-55661455 0.00011 42_[+2]_30 chr6:46405534-46405614 0.00011 36_[+2]_36 chr7:123427865-123427945 0.00013 39_[+2]_33 chr16:8041053-8041133 0.00016 46_[+2]_26 chr19:252931-253011 0.00016 1_[+2]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGASTCAT width=8 seqs=30 chr12:6277137-6277217 ( 11) TGACTCAT 1 chr10:120255275-12025535 ( 22) TGACTCAT 1 chr2:231639444-231639524 ( 19) TGACTCAT 1 chr19:2723231-2723311 ( 2) TGACTCAT 1 chr11:35052434-35052514 ( 16) TGACTCAT 1 chr12:102099857-10209993 ( 3) TGACTCAT 1 chr5:55354366-55354446 ( 72) TGACTCAT 1 chr3:156966535-156966615 ( 19) TGACTCAT 1 chr5:90562302-90562382 ( 18) TGAGTCAT 1 chr21:35855967-35856047 ( 1) TGAGTCAT 1 chr13:42490865-42490945 ( 29) TGAGTCAT 1 chr7:22687231-22687311 ( 27) TGAGTCAT 1 chr5:140900887-140900967 ( 24) TGAGTCAT 1 chr12:111077744-11107782 ( 70) TGAGTCAT 1 chr2:174075387-174075467 ( 51) TGACTCAG 1 chr15:40391099-40391179 ( 12) TGACTCAG 1 chr11:5255886-5255966 ( 1) TGACTCAG 1 chr1:224521830-224521910 ( 42) TGAGTCAG 1 chr5:139365509-139365589 ( 1) TGAGTCAG 1 chr7:44297629-44297709 ( 25) TGACTCAC 1 chr21:37470320-37470400 ( 24) TGAGTCAG 1 chr1:230960850-230960930 ( 23) TGAGTCAC 1 chr7:64205231-64205311 ( 41) TGAGTCAC 1 chr3:23781147-23781227 ( 68) TGAGTCAC 1 chr10:134330912-13433099 ( 8) TGAGTCAC 1 chr7:55661375-55661455 ( 43) TGACTCAA 1 chr6:46405534-46405614 ( 37) TGACTCAA 1 chr7:123427865-123427945 ( 40) TGAGTCAA 1 chr16:8041053-8041133 ( 47) TGATTCAT 1 chr19:252931-253011 ( 2) TGATTCAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.5224 E= 3.1e-006 -1155 -1155 -1155 183 -1155 -1155 217 -1155 179 -1155 -1155 -1155 -1155 118 107 -208 -1155 -1155 -1155 183 -1155 228 -1155 -1155 179 -1155 -1155 -1155 -153 -31 -15 92 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 30 E= 3.1e-006 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.466667 0.466667 0.066667 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.100000 0.166667 0.200000 0.533333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 regular expression -------------------------------------------------------------------------------- TGA[CG]TCA[TG] -------------------------------------------------------------------------------- Time 8.59 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAATAGM MEME-3 width = 8 sites = 67 llr = 487 E-value = 4.2e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 Description -------------------------------------------------------------------------------- Simplified A 77aa1a:4 pos.-specific C ::::2::5 probability G 23::1:a: matrix T ::::6::1 bits 2.3 * 2.1 * 1.8 ** ** 1.6 ** ** Relative 1.4 ** ** Entropy 1.1 *** ** (10.5 bits) 0.9 **** ** 0.7 **** *** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAAATAGC consensus GG A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:160814377-160814457 23 2.65e-05 gaacaagcct aaaatagc ctgctggaga chr6:17701148-17701228 18 2.65e-05 CCCCTTTTTA AAAATAGC TAAgcagtgg chr2:220143934-220144014 63 2.65e-05 GTGTGTGCCC AAAATAGC CGGCTCCGCC chr20:354224-354304 51 2.65e-05 tccagggata aaaatagc agcttcatgg chr12:71054830-71054910 51 2.65e-05 TTCCTTGCTG AAAATAGC AACAGCCACC chr3:152750831-152750911 67 2.65e-05 tgataatgta aaaatagc tctgct chr9:102130731-102130811 18 2.65e-05 CCTTCTGTTA AAAATAGC CTTTGTCTAA chr2:205406458-205406538 23 6.37e-05 ATTACACCTT AAAATAGA GTTATCATCC chr8:124526581-124526661 2 6.37e-05 A AAAATAGA AGTTGCCAGG chr5:61581345-61581425 39 6.37e-05 CACCCTGCCT AAAATAGA TTATCCAGTG chr11:86230454-86230534 30 6.37e-05 CAAATTTCCT AAAATAGA ATTGAAAAAA chr3:151621373-151621453 71 6.37e-05 cattaatgta aaaataga ga chr1:109913441-109913521 50 6.37e-05 ACTCAACCTC AAAATAGA ACATGTCTAT chr18:8944032-8944112 10 6.37e-05 ccacatata aaaataga actctgaccc chr5:80802917-80802997 2 6.37e-05 A AAAATAGA AAGTCTAGAA chr10:75415875-75415955 13 6.37e-05 AGATGTGCTC AAAATAGA TGCCGCTTGT chr10:69553253-69553333 33 6.37e-05 GTCTGTAACA AAAATAGA GTGGAACGTG chr13:51905071-51905151 24 6.37e-05 TCTTGTGACA AAAATAGA AATAACGAAG chr2:69887926-69888006 48 6.37e-05 gaacatactc aaaataga agggagagat chr14:69087015-69087095 18 8.39e-05 TAGGGGCCTA AGAATAGC AACCTTCCCT chr22:19631531-19631611 65 8.39e-05 TTATATTTTA AGAATAGC TGATTGCA chr7:55661375-55661455 5 8.39e-05 GCTA AGAATAGC CATGACTCAA chr6:107974500-107974580 38 8.39e-05 TGAGTGTCCC AGAATAGC TGCGGCTACC chr15:31645817-31645897 69 8.39e-05 ACACAGACCA AGAATAGC TGCT chr5:140900887-140900967 63 1.04e-04 TCATGGGCCT GAAATAGC AGCTGTAATA chr17:42188610-42188690 19 1.04e-04 GCAGGAGACT GAAATAGC AGTTGGGGGA chr10:77055212-77055292 55 1.24e-04 TGGAACATGA AAAACAGC ACATTTGTCT chr1:100643798-100643878 50 1.52e-04 GACAAAGCTG AGAATAGA AAGAATCACA chr5:10607274-10607354 17 1.52e-04 ACACAcactc agaataga ctgtgatgct chr1:201617128-201617208 68 1.81e-04 TCCCGAGCCA GAAATAGA CACAC chr1:235051861-235051941 65 1.81e-04 ATAAAGCCCC GAAATAGA AGTGTTGA chr13:42490865-42490945 53 1.81e-04 AAGCACGCCA GAAATAGA AACAAGATTC chr12:10047951-10048031 57 1.81e-04 agataatctg gaaataga atactcaggt chr8:28572437-28572517 28 2.17e-04 TGTTCTTTCT AAAAGAGC AAGTTACTAT chr9:101649225-101649305 47 2.17e-04 TTTAGAGCAG AAAAGAGC CGGATGTCTA chr14:94000476-94000556 45 2.17e-04 tctgtctcca ggaatagc atacatgcct chr7:123427865-123427945 6 2.44e-04 GATGA AAAACAGA AAAAGAGATA chr20:52269009-52269089 1 2.44e-04 . AAAACAGA AAGCAGGTCC chr6:157144072-157144152 9 2.44e-04 CTCAGGGA AAAACAGA GGCATTTTGA chr17:39949271-39949351 31 2.44e-04 AGGAGACAAG AAAACAGA GATAGGACGG chr18:10593779-10593859 55 2.59e-04 AAGTGTGGCA AGAACAGC AGCTGAAAAC chr18:11917051-11917131 47 2.59e-04 AAGTGTGGCA AGAACAGC GGCTGAAAAC chr8:144882446-144882526 29 2.74e-04 gttataaata gaaacagc cccccctcca chr2:108977690-108977770 72 3.25e-04 tgataaaaat ggaataga c chr21:35855967-35856047 66 3.89e-04 ctctTGGgag aaaaaagc cgaaaag chr5:42586905-42586985 42 3.89e-04 TTTAGGACTA AAAAAAGC CTGAGCACGT chr12:131438349-13143842 67 3.89e-04 ATAGAAAAGG AGAACAGA ACAAAG chr6:46405534-46405614 6 3.89e-04 AACCA AAAAAAGC ATGGAGCTGC chr12:121567069-12156714 47 4.05e-04 CAGACAAACT GAAAGAGC AACCTCAGCA chr17:20937772-20937852 27 4.73e-04 cctcagtctg aaaatagt aacatggaaa chr7:44297629-44297709 15 4.73e-04 TCAGGGTCCT GGAACAGC ACTGACTCAC chr11:10737808-10737888 19 4.73e-04 GCCTTCTCCT AAAATAGT GTTTCTCAAC chr4:159731178-159731258 38 4.73e-04 AGGAAATATA AAAATAGT CACAGATTTA chr6:143206676-143206756 73 4.73e-04 TCCAGGCATA AAAATAGT chr2:153023285-153023365 10 4.95e-04 TCTTTTTTT AGAAGAGA AGGTTAAGAT chrX:2619849-2619929 48 4.95e-04 CAGTGGAGAT AGAAGAGA AGGCACAAGC chr2:9190436-9190516 61 5.60e-04 ctaggttata taaatagc tacgagatgc chr1:16142233-16142313 60 5.60e-04 GTCCTAACGA AAAAAAGA AAAATGCATT chrX:41493656-41493736 25 5.60e-04 CTTAAAACTT TAAATAGC CCTGCAAGGG chr11:66185846-66185926 25 5.60e-04 ACTGGTGATA TAAATAGC TCCTCTCCCA chr12:112432646-11243272 8 6.03e-04 gagaccc agaaaagc cgtggcaaga chr5:55798118-55798198 17 6.03e-04 CAGGGCAATG GAAAGAGA TTATTTTCTT chr22:46852251-46852331 18 6.43e-04 AAGAGAACCC AAAATAgg ccgggcacgg chr5:139365509-139365589 73 6.43e-04 TAGGCCACTG GGAAGAGC chr6:31527047-31527127 39 6.43e-04 AATGGCTGGA GGAAGAGC CCTGTGGGGG chr1:22301369-22301449 39 6.80e-04 GGGCACATAG GGAACAGA GGGCAGGGGA chr10:11684759-11684839 19 9.72e-04 caagcttctt gaaatagg agtctgcgtg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:160814377-160814457 2.6e-05 22_[+3]_50 chr6:17701148-17701228 2.6e-05 17_[+3]_55 chr2:220143934-220144014 2.6e-05 62_[+3]_10 chr20:354224-354304 2.6e-05 50_[+3]_22 chr12:71054830-71054910 2.6e-05 50_[+3]_22 chr3:152750831-152750911 2.6e-05 66_[+3]_6 chr9:102130731-102130811 2.6e-05 17_[+3]_55 chr2:205406458-205406538 6.4e-05 22_[+3]_50 chr8:124526581-124526661 6.4e-05 1_[+3]_71 chr5:61581345-61581425 6.4e-05 38_[+3]_34 chr11:86230454-86230534 6.4e-05 29_[+3]_43 chr3:151621373-151621453 6.4e-05 70_[+3]_2 chr1:109913441-109913521 6.4e-05 49_[+3]_23 chr18:8944032-8944112 6.4e-05 9_[+3]_63 chr5:80802917-80802997 6.4e-05 1_[+3]_71 chr10:75415875-75415955 6.4e-05 12_[+3]_60 chr10:69553253-69553333 6.4e-05 32_[+3]_40 chr13:51905071-51905151 6.4e-05 23_[+3]_49 chr2:69887926-69888006 6.4e-05 47_[+3]_25 chr14:69087015-69087095 8.4e-05 17_[+3]_55 chr22:19631531-19631611 8.4e-05 64_[+3]_8 chr7:55661375-55661455 8.4e-05 4_[+3]_68 chr6:107974500-107974580 8.4e-05 37_[+3]_35 chr15:31645817-31645897 8.4e-05 68_[+3]_4 chr5:140900887-140900967 0.0001 62_[+3]_10 chr17:42188610-42188690 0.0001 18_[+3]_54 chr10:77055212-77055292 0.00012 54_[+3]_18 chr1:100643798-100643878 0.00015 49_[+3]_23 chr5:10607274-10607354 0.00015 16_[+3]_56 chr1:201617128-201617208 0.00018 67_[+3]_5 chr1:235051861-235051941 0.00018 64_[+3]_8 chr13:42490865-42490945 0.00018 52_[+3]_20 chr12:10047951-10048031 0.00018 56_[+3]_16 chr8:28572437-28572517 0.00022 27_[+3]_45 chr9:101649225-101649305 0.00022 46_[+3]_26 chr14:94000476-94000556 0.00022 44_[+3]_28 chr7:123427865-123427945 0.00024 5_[+3]_67 chr20:52269009-52269089 0.00024 [+3]_72 chr6:157144072-157144152 0.00024 8_[+3]_64 chr17:39949271-39949351 0.00024 30_[+3]_42 chr18:10593779-10593859 0.00026 54_[+3]_18 chr18:11917051-11917131 0.00026 46_[+3]_26 chr8:144882446-144882526 0.00027 28_[+3]_44 chr2:108977690-108977770 0.00032 71_[+3]_1 chr21:35855967-35856047 0.00039 65_[+3]_7 chr5:42586905-42586985 0.00039 41_[+3]_31 chr12:131438349-13143842 0.00039 66_[+3]_6 chr6:46405534-46405614 0.00039 5_[+3]_67 chr12:121567069-12156714 0.0004 46_[+3]_26 chr17:20937772-20937852 0.00047 26_[+3]_46 chr7:44297629-44297709 0.00047 14_[+3]_58 chr11:10737808-10737888 0.00047 18_[+3]_54 chr4:159731178-159731258 0.00047 37_[+3]_35 chr6:143206676-143206756 0.00047 72_[+3] chr2:153023285-153023365 0.0005 9_[+3]_63 chrX:2619849-2619929 0.0005 47_[+3]_25 chr2:9190436-9190516 0.00056 60_[+3]_12 chr1:16142233-16142313 0.00056 59_[+3]_13 chrX:41493656-41493736 0.00056 24_[+3]_48 chr11:66185846-66185926 0.00056 24_[+3]_48 chr12:112432646-11243272 0.0006 7_[+3]_65 chr5:55798118-55798198 0.0006 16_[+3]_56 chr22:46852251-46852331 0.00064 17_[+3]_55 chr5:139365509-139365589 0.00064 72_[+3] chr6:31527047-31527127 0.00064 38_[+3]_34 chr1:22301369-22301449 0.00068 38_[+3]_34 chr10:11684759-11684839 0.00097 18_[+3]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAATAGM width=8 seqs=67 chr1:160814377-160814457 ( 23) AAAATAGC 1 chr6:17701148-17701228 ( 18) AAAATAGC 1 chr2:220143934-220144014 ( 63) AAAATAGC 1 chr20:354224-354304 ( 51) AAAATAGC 1 chr12:71054830-71054910 ( 51) AAAATAGC 1 chr3:152750831-152750911 ( 67) AAAATAGC 1 chr9:102130731-102130811 ( 18) AAAATAGC 1 chr2:205406458-205406538 ( 23) AAAATAGA 1 chr8:124526581-124526661 ( 2) AAAATAGA 1 chr5:61581345-61581425 ( 39) AAAATAGA 1 chr11:86230454-86230534 ( 30) AAAATAGA 1 chr3:151621373-151621453 ( 71) AAAATAGA 1 chr1:109913441-109913521 ( 50) AAAATAGA 1 chr18:8944032-8944112 ( 10) AAAATAGA 1 chr5:80802917-80802997 ( 2) AAAATAGA 1 chr10:75415875-75415955 ( 13) AAAATAGA 1 chr10:69553253-69553333 ( 33) AAAATAGA 1 chr13:51905071-51905151 ( 24) AAAATAGA 1 chr2:69887926-69888006 ( 48) AAAATAGA 1 chr14:69087015-69087095 ( 18) AGAATAGC 1 chr22:19631531-19631611 ( 65) AGAATAGC 1 chr7:55661375-55661455 ( 5) AGAATAGC 1 chr6:107974500-107974580 ( 38) AGAATAGC 1 chr15:31645817-31645897 ( 69) AGAATAGC 1 chr5:140900887-140900967 ( 63) GAAATAGC 1 chr17:42188610-42188690 ( 19) GAAATAGC 1 chr10:77055212-77055292 ( 55) AAAACAGC 1 chr1:100643798-100643878 ( 50) AGAATAGA 1 chr5:10607274-10607354 ( 17) AGAATAGA 1 chr1:201617128-201617208 ( 68) GAAATAGA 1 chr1:235051861-235051941 ( 65) GAAATAGA 1 chr13:42490865-42490945 ( 53) GAAATAGA 1 chr12:10047951-10048031 ( 57) GAAATAGA 1 chr8:28572437-28572517 ( 28) AAAAGAGC 1 chr9:101649225-101649305 ( 47) AAAAGAGC 1 chr14:94000476-94000556 ( 45) GGAATAGC 1 chr7:123427865-123427945 ( 6) AAAACAGA 1 chr20:52269009-52269089 ( 1) AAAACAGA 1 chr6:157144072-157144152 ( 9) AAAACAGA 1 chr17:39949271-39949351 ( 31) AAAACAGA 1 chr18:10593779-10593859 ( 55) AGAACAGC 1 chr18:11917051-11917131 ( 47) AGAACAGC 1 chr8:144882446-144882526 ( 29) GAAACAGC 1 chr2:108977690-108977770 ( 72) GGAATAGA 1 chr21:35855967-35856047 ( 66) AAAAAAGC 1 chr5:42586905-42586985 ( 42) AAAAAAGC 1 chr12:131438349-13143842 ( 67) AGAACAGA 1 chr6:46405534-46405614 ( 6) AAAAAAGC 1 chr12:121567069-12156714 ( 47) GAAAGAGC 1 chr17:20937772-20937852 ( 27) AAAATAGT 1 chr7:44297629-44297709 ( 15) GGAACAGC 1 chr11:10737808-10737888 ( 19) AAAATAGT 1 chr4:159731178-159731258 ( 38) AAAATAGT 1 chr6:143206676-143206756 ( 73) AAAATAGT 1 chr2:153023285-153023365 ( 10) AGAAGAGA 1 chrX:2619849-2619929 ( 48) AGAAGAGA 1 chr2:9190436-9190516 ( 61) TAAATAGC 1 chr1:16142233-16142313 ( 60) AAAAAAGA 1 chrX:41493656-41493736 ( 25) TAAATAGC 1 chr11:66185846-66185926 ( 25) TAAATAGC 1 chr12:112432646-11243272 ( 8) AGAAAAGC 1 chr5:55798118-55798198 ( 17) GAAAGAGA 1 chr22:46852251-46852331 ( 18) AAAATAGG 1 chr5:139365509-139365589 ( 73) GGAAGAGC 1 chr6:31527047-31527127 ( 39) GGAAGAGC 1 chr1:22301369-22301449 ( 39) GGAACAGA 1 chr10:11684759-11684839 ( 19) GAAATAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.13703 E= 4.2e-005 131 -1271 10 -265 131 -1271 35 -1271 179 -1271 -1271 -1271 179 -1271 -1271 -1271 -196 -33 -90 119 179 -1271 -1271 -1271 -1271 -1271 217 -1271 58 121 -290 -224 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 67 E= 4.2e-005 0.716418 0.000000 0.238806 0.044776 0.716418 0.000000 0.283582 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.074627 0.164179 0.119403 0.641791 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.432836 0.477612 0.029851 0.059701 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATAGM MEME-3 regular expression -------------------------------------------------------------------------------- [AG][AG]AATAG[CA] -------------------------------------------------------------------------------- Time 12.10 secs. ******************************************************************************** ******************************************************************************** MOTIF CMCAGCWG MEME-4 width = 8 sites = 28 llr = 245 E-value = 2.7e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :4:9::4: pos.-specific C 86a::a:1 probability G 1:::a::9 matrix T 11:1::6: bits 2.3 * ** 2.1 * ** 1.8 * ** 1.6 * ** * Relative 1.4 **** * Entropy 1.1 * **** * (12.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCCAGCTG consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:220143934-220144014 28 7.26e-06 TCTCCCAGGT CCCAGCTG GGGCTGACGT chr12:52444860-52444940 17 7.26e-06 CCTGGGGGCC CCCAGCTG GGACCCGAGT chr2:132426611-132426691 28 1.47e-05 tgctgggcca cccagcag gctctcagca chr8:97961963-97962043 62 1.47e-05 GAGCAGAATG CCCAGCAG TCAGTGCTGG chr10:45474262-45474342 31 1.47e-05 TTTATACCTT CCCAGCAG CTATCAATCA chr6:37153979-37154059 35 1.47e-05 ggggtatata cccagcag tcagattgct chr11:12039575-12039655 49 1.47e-05 CCTGGTCAGG CCCAGCAG TGCTTGCCTT chr5:148533617-148533697 39 2.49e-05 AGTCTAATGA CACAGCTG ATCTATTTTA chr12:8191492-8191572 53 2.49e-05 CCGGTAGGCA CACAGCTG GGTGTCTCCC chr11:123992969-12399304 26 2.49e-05 TAAAAATAGT CACAGCTG TGGCTTTGAC chr2:109317815-109317895 45 2.49e-05 GCTGGCCGGG CACAGCTG ATAAAGGCAT chr6:15736080-15736160 41 3.54e-05 ctattattag cacagcag gtttacagtt chr7:112125008-112125088 10 3.54e-05 TGGGGAAGG CACAGCAG CCCTTCCTAG chr12:131438349-13143842 38 3.54e-05 CCAGGAAGGA CACAGCAG TGGGGATATA chr2:217173475-217173555 48 4.33e-05 CACTGCCATA GCCAGCTG TGAATCCTCC chr7:131271115-131271195 62 5.80e-05 CAGGCCAGTG GCCAGCAG ATGGACAGAT chr20:37614330-37614410 38 5.80e-05 GGTTTGGAAT CCCAGCTC TTAATCAGTT chr22:46852251-46852331 53 7.49e-05 cgcctgtaat cccagcac tttgggaggc chr6:17701148-17701228 50 7.49e-05 tgcctgtaat cccagcac ttcgcgggag chr7:115938268-115938348 12 7.49e-05 tgccatatga tccagctg atatggtttg chr10:134235060-13423514 1 7.49e-05 . TCCAGCTG AGGCTGTCCC chr6:147448026-147448106 15 7.49e-05 agttcagccc tccagctg ttcttaccaa chr7:140206765-140206845 56 8.48e-05 ttaaggtcag ctcagCTG TTAGCTGCCT chr6:52742132-52742212 65 8.48e-05 GGTTTGCTAT CTCAGCTG TGGTTTGC chr7:64205231-64205311 6 9.59e-05 CATTT GACAGCTG CTATTTATAA chr2:240162277-240162357 26 1.13e-04 TTTTTGGAAA CCCTGCTG GACAGGGACG chr7:45030131-45030211 15 1.44e-04 AGAGAAACAT GACAGCAG TATTTTAACT chr10:62588444-62588524 50 1.99e-04 ccaacaatcc cactgctg ggtatataca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:220143934-220144014 7.3e-06 27_[+4]_45 chr12:52444860-52444940 7.3e-06 16_[+4]_56 chr2:132426611-132426691 1.5e-05 27_[+4]_45 chr8:97961963-97962043 1.5e-05 61_[+4]_11 chr10:45474262-45474342 1.5e-05 30_[+4]_42 chr6:37153979-37154059 1.5e-05 34_[+4]_38 chr11:12039575-12039655 1.5e-05 48_[+4]_24 chr5:148533617-148533697 2.5e-05 38_[+4]_34 chr12:8191492-8191572 2.5e-05 52_[+4]_20 chr11:123992969-12399304 2.5e-05 25_[+4]_47 chr2:109317815-109317895 2.5e-05 44_[+4]_28 chr6:15736080-15736160 3.5e-05 40_[+4]_32 chr7:112125008-112125088 3.5e-05 9_[+4]_63 chr12:131438349-13143842 3.5e-05 37_[+4]_35 chr2:217173475-217173555 4.3e-05 47_[+4]_25 chr7:131271115-131271195 5.8e-05 61_[+4]_11 chr20:37614330-37614410 5.8e-05 37_[+4]_35 chr22:46852251-46852331 7.5e-05 52_[+4]_20 chr6:17701148-17701228 7.5e-05 49_[+4]_23 chr7:115938268-115938348 7.5e-05 11_[+4]_61 chr10:134235060-13423514 7.5e-05 [+4]_72 chr6:147448026-147448106 7.5e-05 14_[+4]_58 chr7:140206765-140206845 8.5e-05 55_[+4]_17 chr6:52742132-52742212 8.5e-05 64_[+4]_8 chr7:64205231-64205311 9.6e-05 5_[+4]_67 chr2:240162277-240162357 0.00011 25_[+4]_47 chr7:45030131-45030211 0.00014 14_[+4]_58 chr10:62588444-62588524 0.0002 49_[+4]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CMCAGCWG width=8 seqs=28 chr2:220143934-220144014 ( 28) CCCAGCTG 1 chr12:52444860-52444940 ( 17) CCCAGCTG 1 chr2:132426611-132426691 ( 28) CCCAGCAG 1 chr8:97961963-97962043 ( 62) CCCAGCAG 1 chr10:45474262-45474342 ( 31) CCCAGCAG 1 chr6:37153979-37154059 ( 35) CCCAGCAG 1 chr11:12039575-12039655 ( 49) CCCAGCAG 1 chr5:148533617-148533697 ( 39) CACAGCTG 1 chr12:8191492-8191572 ( 53) CACAGCTG 1 chr11:123992969-12399304 ( 26) CACAGCTG 1 chr2:109317815-109317895 ( 45) CACAGCTG 1 chr6:15736080-15736160 ( 41) CACAGCAG 1 chr7:112125008-112125088 ( 10) CACAGCAG 1 chr12:131438349-13143842 ( 38) CACAGCAG 1 chr2:217173475-217173555 ( 48) GCCAGCTG 1 chr7:131271115-131271195 ( 62) GCCAGCAG 1 chr20:37614330-37614410 ( 38) CCCAGCTC 1 chr22:46852251-46852331 ( 53) CCCAGCAC 1 chr6:17701148-17701228 ( 50) CCCAGCAC 1 chr7:115938268-115938348 ( 12) TCCAGCTG 1 chr10:134235060-13423514 ( 1) TCCAGCTG 1 chr6:147448026-147448106 ( 15) TCCAGCTG 1 chr7:140206765-140206845 ( 56) CTCAGCTG 1 chr6:52742132-52742212 ( 65) CTCAGCTG 1 chr7:64205231-64205311 ( 6) GACAGCTG 1 chr2:240162277-240162357 ( 26) CCCTGCTG 1 chr7:45030131-45030211 ( 15) GACAGCAG 1 chr10:62588444-62588524 ( 50) CACTGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.5697 E= 2.7e-002 -1145 186 -64 -140 30 147 -1145 -198 -1145 228 -1145 -1145 168 -1145 -1145 -198 -1145 -1145 217 -1145 -1145 228 -1145 -1145 57 -1145 -1145 102 -1145 -94 201 -1145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 28 E= 2.7e-002 0.000000 0.750000 0.142857 0.107143 0.357143 0.571429 0.000000 0.071429 0.000000 1.000000 0.000000 0.000000 0.928571 0.000000 0.000000 0.071429 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.428571 0.000000 0.000000 0.571429 0.000000 0.107143 0.892857 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CMCAGCWG MEME-4 regular expression -------------------------------------------------------------------------------- C[CA]CAGC[TA]G -------------------------------------------------------------------------------- Time 15.56 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTCCYCC MEME-5 width = 8 sites = 14 llr = 138 E-value = 1.4e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 1::::::: pos.-specific C 9a:896aa probability G ::11:::: matrix T ::9114:: bits 2.3 * ** 2.1 * ** 1.8 ** ** 1.6 ** * ** Relative 1.4 ***** ** Entropy 1.1 ******** (14.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCTCCCCC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:107282235-107282315 53 4.44e-06 GCGGTGCGTG CCTCCCCC CGCCCCCGGC chr1:201617128-201617208 50 4.44e-06 CTCGCAGATA CCTCCCCC TCCCGAGCCA chr10:75415875-75415955 40 4.44e-06 TACTCCCCTC CCTCCCCC TTCTGTGTTA chr15:31645817-31645897 42 4.44e-06 CCACTCTTAT CCTCCCCC CAAAGGGAGA chr6:4371817-4371897 68 1.05e-05 CTGGAGAGCA CCTCCTCC AAGGC chr17:49028100-49028180 53 1.05e-05 taaaccggct cctcctcc tgacttccct chr13:51905071-51905151 71 1.05e-05 CAGCCTCCCA CCTCCTCC CA chr6:17701148-17701228 4 1.66e-05 TTT CCTTCCCC TTTTTAAAAA chr11:66185846-66185926 34 2.27e-05 ATAAATAGCT CCTCTCCC ACGGCCTGAA chr10:134235060-13423514 36 2.62e-05 GTCTCCCTTC CCGCCCCC ACCCTACAGA chr16:15262992-15263072 22 3.09e-05 ACTCTCCTGC CCTGCCCC CAGTTACTGT chr11:10737808-10737888 10 4.55e-05 ATTGGTATG CCTTCTCC TAAAATAGTG chr14:91094058-91094138 19 4.55e-05 AATCTGGAAT ACTCCCCC ATCCTTCTAG chr11:107298704-10729878 37 5.38e-05 TTTCCTAAAA CCTCTTCC TTTAGTGTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:107282235-107282315 4.4e-06 52_[+5]_20 chr1:201617128-201617208 4.4e-06 49_[+5]_23 chr10:75415875-75415955 4.4e-06 39_[+5]_33 chr15:31645817-31645897 4.4e-06 41_[+5]_31 chr6:4371817-4371897 1.1e-05 67_[+5]_5 chr17:49028100-49028180 1.1e-05 52_[+5]_20 chr13:51905071-51905151 1.1e-05 70_[+5]_2 chr6:17701148-17701228 1.7e-05 3_[+5]_69 chr11:66185846-66185926 2.3e-05 33_[+5]_39 chr10:134235060-13423514 2.6e-05 35_[+5]_37 chr16:15262992-15263072 3.1e-05 21_[+5]_51 chr11:10737808-10737888 4.6e-05 9_[+5]_63 chr14:91094058-91094138 4.6e-05 18_[+5]_54 chr11:107298704-10729878 5.4e-05 36_[+5]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTCCYCC width=8 seqs=14 chr8:107282235-107282315 ( 53) CCTCCCCC 1 chr1:201617128-201617208 ( 50) CCTCCCCC 1 chr10:75415875-75415955 ( 40) CCTCCCCC 1 chr15:31645817-31645897 ( 42) CCTCCCCC 1 chr6:4371817-4371897 ( 68) CCTCCTCC 1 chr17:49028100-49028180 ( 53) CCTCCTCC 1 chr13:51905071-51905151 ( 71) CCTCCTCC 1 chr6:17701148-17701228 ( 4) CCTTCCCC 1 chr11:66185846-66185926 ( 34) CCTCTCCC 1 chr10:134235060-13423514 ( 36) CCGCCCCC 1 chr16:15262992-15263072 ( 22) CCTGCCCC 1 chr11:10737808-10737888 ( 10) CCTTCTCC 1 chr14:91094058-91094138 ( 19) ACTCCCCC 1 chr11:107298704-10729878 ( 37) CCTCTTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.0178 E= 1.4e+001 -202 217 -1045 -1045 -1045 228 -1045 -1045 -1045 -1045 -164 172 -1045 193 -164 -98 -1045 206 -1045 -98 -1045 164 -1045 34 -1045 228 -1045 -1045 -1045 228 -1045 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 14 E= 1.4e+001 0.071429 0.928571 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.071429 0.928571 0.000000 0.785714 0.071429 0.142857 0.000000 0.857143 0.000000 0.142857 0.000000 0.642857 0.000000 0.357143 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCYCC MEME-5 regular expression -------------------------------------------------------------------------------- CCTCC[CT]CC -------------------------------------------------------------------------------- Time 18.91 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:138093581-138093661 6.03e-01 80 chr2:188847556-188847636 1.08e-01 6_[+1(9.53e-05)]_66 chr18:11917051-11917131 1.32e-02 11_[+3(2.65e-05)]_61 chr5:7714435-7714515 3.36e-02 15_[+1(9.53e-05)]_57 chr18:10593779-10593859 3.43e-03 19_[+3(2.65e-05)]_53 chr5:55798118-55798198 7.51e-02 80 chr1:168583087-168583167 7.80e-02 80 chr2:69887926-69888006 8.17e-02 47_[+3(6.37e-05)]_25 chr15:59419577-59419657 9.19e-01 80 chr2:109317815-109317895 5.62e-03 19_[+1(9.53e-05)]_17_[+4(2.49e-05)]_\ 10_[+1(9.53e-05)]_10 chr15:83755057-83755137 9.27e-02 45_[+1(3.18e-05)]_27 chr17:56784150-56784230 2.81e-02 70_[+1(9.53e-05)]_2 chr10:134330912-13433099 2.81e-04 7_[+2(9.29e-05)]_25_[+3(2.65e-05)]_\ 32 chr7:93575210-93575290 1.99e-01 80 chr2:108977690-108977770 1.40e-02 51_[+3(6.37e-05)]_21 chrX:2619849-2619929 4.35e-02 80 chr14:91094058-91094138 6.22e-02 18_[+5(4.55e-05)]_54 chr6:143206676-143206756 5.60e-02 80 chr6:66171157-66171237 8.57e-02 80 chr6:147448026-147448106 6.74e-02 14_[+4(7.49e-05)]_58 chr20:5530012-5530092 8.67e-02 80 chr9:102130731-102130811 4.57e-02 17_[+3(2.65e-05)]_55 chr4:7833176-7833256 8.29e-02 80 chr6:46405534-46405614 3.14e-03 80 chr8:9182179-9182259 7.41e-02 28_[+1(9.53e-05)]_44 chr10:52020646-52020726 5.56e-02 80 chr14:94000476-94000556 1.33e-01 80 chr4:25090218-25090298 3.06e-01 80 chr1:155934160-155934240 1.43e-01 80 chr6:110711118-110711198 2.99e-01 80 chr11:34631012-34631092 2.65e-01 80 chr2:240162277-240162357 1.31e-02 80 chr8:23218206-23218286 1.81e-02 80 chr5:131456555-131456635 3.09e-02 80 chr6:138014985-138015065 6.52e-01 80 chr12:15142890-15142970 1.29e-01 80 chr8:144882446-144882526 2.45e-02 80 chr19:3451011-3451091 5.10e-02 33_[+1(9.53e-05)]_39 chr12:45718357-45718437 1.62e-02 14_[+3(2.65e-05)]_58 chr16:25225078-25225158 2.35e-01 80 chr3:156966535-156966615 6.04e-02 18_[+2(1.78e-05)]_54 chr16:88465384-88465464 2.39e-01 80 chr3:40665161-40665241 1.34e-02 40_[+1(9.53e-05)]_32 chr5:55354366-55354446 4.86e-04 54_[+1(9.53e-05)]_9_[+2(1.78e-05)]_\ 1 chr20:57483006-57483086 2.49e-01 5_[+1(9.53e-05)]_67 chr11:66185846-66185926 9.12e-04 33_[+5(2.27e-05)]_39 chr1:53477031-53477111 7.14e-01 80 chr16:77730206-77730286 2.12e-03 54_[+3(2.65e-05)]_18 chr15:31645817-31645897 1.15e-04 41_[+5(4.44e-06)]_19_[+3(8.39e-05)]_\ 4 chrX:41493656-41493736 8.45e-02 80 chr11:12039575-12039655 3.59e-04 28_[+1(9.53e-05)]_12_[+4(1.47e-05)]_\ 24 chr20:37614330-37614410 8.40e-03 37_[+4(5.80e-05)]_35 chr13:51905071-51905151 3.35e-04 23_[+3(6.37e-05)]_39_[+5(1.05e-05)]_\ 2 chr12:131438349-13143842 1.24e-02 37_[+4(3.54e-05)]_35 chr1:245955200-245955280 4.85e-01 80 chr10:69553253-69553333 5.89e-02 32_[+3(6.37e-05)]_40 chr10:75415875-75415955 1.83e-05 12_[+3(6.37e-05)]_19_[+5(4.44e-06)]_\ 33 chr6:52742132-52742212 4.42e-03 64_[+4(8.48e-05)]_8 chr20:45882845-45882925 2.74e-01 80 chr1:16142233-16142313 1.62e-02 25_[+3(6.37e-05)]_47 chr10:76875071-76875151 4.25e-01 80 chr5:10607274-10607354 1.53e-01 80 chr17:39949271-39949351 2.38e-01 80 chr17:42188610-42188690 4.39e-03 45_[+1(9.53e-05)]_27 chr5:80802917-80802997 4.16e-02 1_[+3(6.37e-05)]_71 chr18:60860271-60860351 9.76e-01 80 chr8:98811049-98811129 1.31e-02 80 chr12:111077744-11107782 1.49e-02 69_[+2(3.69e-05)]_3 chr12:121652861-12165294 3.06e-02 34_[+1(9.53e-05)]_38 chr3:152750831-152750911 2.65e-02 66_[+3(2.65e-05)]_6 chr10:62588444-62588524 7.39e-04 18_[+3(6.37e-05)]_54 chr18:8944032-8944112 1.16e-02 9_[+3(6.37e-05)]_63 chr12:10047951-10048031 7.64e-02 80 chr18:46482315-46482395 1.71e-01 80 chr3:23781147-23781227 1.56e-03 14_[+3(6.37e-05)]_45_[+2(9.29e-05)]_\ 5 chr12:52430717-52430797 3.29e-01 80 chr15:81384678-81384758 5.84e-03 47_[+5(8.20e-05)]_25 chr17:27262856-27262936 2.24e-02 80 chr1:46639358-46639438 9.31e-03 50_[+3(2.65e-05)]_22 chr1:207952520-207952600 4.79e-02 80 chr6:30781085-30781165 4.62e-02 80 chr4:159731178-159731258 2.67e-01 80 chr11:10737808-10737888 3.39e-03 9_[+5(4.55e-05)]_63 chrX:2035540-2035620 1.02e-01 80 chr12:102099857-10209993 2.85e-02 2_[+2(1.78e-05)]_70 chr12:90250381-90250461 2.84e-01 80 chr20:23314992-23315072 2.59e-01 80 chr17:49028100-49028180 1.37e-02 52_[+5(1.05e-05)]_20 chr20:6015211-6015291 3.91e-01 80 chr10:11684759-11684839 8.91e-02 80 chr6:37153979-37154059 6.43e-03 34_[+4(1.47e-05)]_38 chr10:134235060-13423514 6.35e-03 [+4(7.49e-05)]_27_[+5(2.62e-05)]_37 chr11:35052434-35052514 1.24e-03 15_[+2(1.78e-05)]_57 chr2:217173475-217173555 6.49e-05 25_[+3(6.37e-05)]_14_[+4(4.33e-05)]_\ 25 chr11:86222325-86222405 5.22e-01 80 chr19:4654827-4654907 9.24e-01 80 chr11:1569736-1569816 6.75e-03 25_[+1(9.53e-05)]_47 chr19:252931-253011 1.20e-02 80 chr1:109913441-109913521 9.92e-04 49_[+3(6.37e-05)]_6_[+1(9.53e-05)]_\ 9 chr11:5255886-5255966 3.36e-04 [+2(5.09e-05)]_72 chr1:100643798-100643878 1.11e-02 80 chr5:140900887-140900967 1.10e-02 23_[+2(3.69e-05)]_49 chr16:8041053-8041133 2.36e-02 80 chr11:123992969-12399304 1.57e-03 25_[+4(2.49e-05)]_47 chr10:45474262-45474342 2.36e-05 30_[+4(1.47e-05)]_25_[+3(2.65e-05)]_\ 9 chr12:52444860-52444940 5.44e-03 16_[+4(7.26e-06)]_56 chr7:770913-770993 1.12e-01 80 chr1:234680500-234680580 3.42e-01 80 chr18:57544796-57544876 4.41e-01 80 chr7:115938268-115938348 2.68e-02 11_[+4(7.49e-05)]_61 chr1:181100566-181100646 6.27e-01 80 chr6:157144072-157144152 2.00e-02 80 chr2:132399284-132399364 1.94e-01 80 chr10:77055212-77055292 1.14e-02 80 chr3:15724450-15724530 2.06e-01 80 chr3:151621373-151621453 9.90e-04 13_[+1(9.53e-05)]_49_[+3(6.37e-05)]_\ 2 chr16:11828131-11828211 3.51e-01 80 chr15:85078222-85078302 9.21e-01 80 chr5:50280617-50280697 8.40e-02 80 chr9:101649225-101649305 5.18e-02 80 chr7:112125008-112125088 2.05e-04 9_[+4(3.54e-05)]_25_[+3(2.65e-05)]_\ 30 chr19:2723231-2723311 2.92e-03 1_[+2(1.78e-05)]_42_[+1(9.53e-05)]_\ 21 chr8:125029932-125030012 2.11e-02 38_[+1(9.53e-05)]_34 chr11:35373914-35373994 3.19e-02 80 chr3:71591883-71591963 2.35e-05 15_[+3(6.37e-05)]_11_[+5(7.37e-05)]_\ 38 chr10:97057308-97057388 1.22e-01 61_[+1(9.53e-05)]_11 chr12:8191492-8191572 1.10e-02 52_[+4(2.49e-05)]_20 chr12:76247459-76247539 1.48e-01 80 chr7:45030131-45030211 1.99e-02 80 chr4:25090417-25090497 2.90e-01 80 chr21:37470320-37470400 7.34e-03 23_[+2(7.90e-05)]_11_[+1(9.53e-05)]_\ 30 chr22:28769959-28770039 3.01e-02 70_[+1(9.53e-05)]_2 chr12:112432646-11243272 4.39e-01 80 chr19:17791159-17791239 2.82e-01 21_[+1(9.53e-05)]_51 chr1:78548078-78548158 3.72e-02 80 chr2:202016199-202016279 1.83e-01 80 chr7:158503639-158503719 7.51e-01 80 chr20:52269009-52269089 6.64e-03 80 chr5:88081856-88081936 3.35e-01 80 chr11:86230454-86230534 4.10e-02 29_[+3(6.37e-05)]_43 chr6:15434544-15434624 8.82e-01 80 chr8:28572437-28572517 3.03e-02 41_[+1(9.53e-05)]_31 chr7:44297629-44297709 8.45e-04 24_[+2(7.90e-05)]_48 chr3:67081361-67081441 3.76e-01 80 chr2:9748125-9748205 7.37e-02 80 chr4:79705513-79705593 1.71e-01 80 chr5:42586905-42586985 2.40e-01 80 chr3:186606453-186606533 9.55e-02 44_[+1(9.53e-05)]_28 chr15:48843467-48843547 2.68e-01 80 chr2:178574739-178574819 3.80e-01 80 chr12:25062780-25062860 8.28e-03 2_[+1(9.53e-05)]_70 chr8:87121007-87121087 8.30e-01 80 chr6:107974500-107974580 6.50e-02 37_[+3(8.39e-05)]_35 chr11:5836886-5836966 5.50e-04 34_[+3(2.65e-05)]_38 chr10:115785222-11578530 3.93e-01 80 chr5:61581345-61581425 5.38e-02 38_[+3(6.37e-05)]_34 chr7:55661375-55661455 3.64e-03 4_[+3(8.39e-05)]_68 chr21:30593890-30593970 2.30e-01 80 chr5:131094344-131094424 3.08e-01 80 chr7:47521834-47521914 1.05e-01 41_[+1(9.53e-05)]_31 chr15:40391099-40391179 6.65e-04 11_[+2(5.09e-05)]_61 chr1:10127231-10127311 4.13e-02 80 chr1:21900762-21900842 1.97e-03 18_[+3(2.65e-05)]_54 chr12:121567069-12156714 1.20e-01 80 chr1:121324817-121324897 4.87e-02 80 chr6:16320354-16320434 1.44e-01 80 chr10:93861315-93861395 2.57e-01 80 chr6:68606560-68606640 1.05e-01 80 chr7:22687231-22687311 7.79e-02 26_[+2(3.69e-05)]_46 chr5:148533617-148533697 1.26e-02 38_[+4(2.49e-05)]_34 chr17:20937772-20937852 3.56e-01 80 chr13:42490865-42490945 8.39e-03 28_[+2(3.69e-05)]_44 chr3:165877687-165877767 1.43e-01 80 chr12:71054830-71054910 2.63e-03 50_[+3(2.65e-05)]_22 chr7:64205231-64205311 2.40e-04 5_[+4(9.59e-05)]_[+1(9.53e-05)]_19_\ [+2(9.29e-05)]_32 chr1:109981596-109981676 7.57e-02 80 chr6:31527047-31527127 1.31e-01 80 chr2:231639444-231639524 1.87e-02 18_[+2(1.78e-05)]_54 chr10:120255275-12025535 4.89e-03 21_[+2(1.78e-05)]_51 chr1:235051861-235051941 6.38e-03 27_[+1(9.53e-05)]_45 chr5:145022946-145023026 6.81e-02 80 chr7:131271115-131271195 1.03e-01 61_[+4(5.80e-05)]_11 chr20:354224-354304 3.08e-03 50_[+3(2.65e-05)]_22 chr1:201617128-201617208 5.61e-04 49_[+5(4.44e-06)]_23 chr8:124526581-124526661 2.06e-02 1_[+3(6.37e-05)]_71 chr1:65222981-65223061 2.38e-01 80 chr3:152769978-152770058 6.33e-01 80 chr8:42054201-42054281 4.11e-01 80 chr6:70861708-70861788 2.19e-02 56_[+1(9.53e-05)]_16 chr2:153023285-153023365 5.01e-02 80 chr9:127321213-127321293 5.03e-01 80 chr8:97961963-97962043 3.16e-03 61_[+4(1.47e-05)]_11 chr7:123427865-123427945 3.14e-04 62_[+3(2.65e-05)]_10 chr12:102415434-10241551 4.15e-02 80 chr2:132426611-132426691 3.68e-02 27_[+4(1.47e-05)]_45 chr22:24907356-24907436 1.23e-01 80 chr6:15736080-15736160 1.72e-02 40_[+4(3.54e-05)]_32 chr2:205406458-205406538 4.58e-02 22_[+3(6.37e-05)]_50 chr2:220143934-220144014 4.33e-05 27_[+4(7.26e-06)]_27_[+3(2.65e-05)]_\ 10 chr6:17701148-17701228 1.63e-06 3_[+5(1.66e-05)]_6_[+3(2.65e-05)]_\ 24_[+4(7.49e-05)]_23 chr12:6277137-6277217 3.37e-04 10_[+2(1.78e-05)]_13_[+1(9.53e-05)]_\ 41 chr11:107298704-10729878 2.22e-02 36_[+5(5.38e-05)]_36 chr22:19631531-19631611 2.84e-03 64_[+3(8.39e-05)]_8 chr1:160814377-160814457 3.54e-03 22_[+3(2.65e-05)]_50 chr8:107282235-107282315 2.53e-03 52_[+5(4.44e-06)]_20 chr3:73002864-73002944 3.28e-01 80 chr12:123210693-12321077 3.79e-01 80 chr2:8945564-8945644 2.28e-01 80 chr7:107877565-107877645 8.35e-02 80 chr1:16339317-16339397 1.79e-01 80 chrX:70393424-70393504 3.15e-01 80 chr6:4371817-4371897 2.85e-03 67_[+5(1.05e-05)]_5 chr14:34122023-34122103 7.89e-01 80 chr15:67675214-67675294 4.26e-01 80 chr7:140206765-140206845 7.92e-04 4_[+1(9.53e-05)]_43_[+4(8.48e-05)]_\ 17 chr1:43810068-43810148 2.13e-01 80 chr5:139365509-139365589 3.03e-03 [+2(7.90e-05)]_72 chr7:75324195-75324275 2.43e-01 80 chr12:70886817-70886897 6.33e-02 80 chr3:45155267-45155347 1.57e-01 80 chr17:43242821-43242901 1.35e-01 80 chr3:156878625-156878705 1.43e-01 80 chr21:35855967-35856047 7.82e-04 [+2(3.69e-05)]_4_[+1(9.53e-05)]_60 chr3:196242219-196242299 2.65e-02 80 chr12:26451867-26451947 2.24e-01 80 chr8:42125404-42125484 9.03e-01 80 chr1:231242162-231242242 1.99e-02 24_[+1(9.53e-05)]_48 chr1:230960850-230960930 3.37e-04 10_[+3(2.65e-05)]_4_[+2(9.29e-05)]_\ 50 chr17:38085571-38085651 1.71e-01 80 chr8:126175767-126175847 7.69e-01 80 chr4:84463547-84463627 1.25e-01 68_[+1(9.53e-05)]_4 chr1:224521830-224521910 2.86e-02 41_[+2(7.90e-05)]_31 chr7:16387573-16387653 1.49e-03 47_[+1(9.53e-05)]_25 chr2:9190436-9190516 1.01e-02 80 chr10:99600095-99600175 2.07e-02 80 chr10:106099414-10609949 4.30e-04 22_[+3(6.37e-05)]_50 chr10:116394594-11639467 5.31e-01 80 chr14:69087015-69087095 1.02e-03 17_[+3(8.39e-05)]_35_[+5(9.82e-05)]_\ 12 chr2:174075387-174075467 5.87e-05 10_[+1(9.53e-05)]_32_[+2(5.09e-05)]_\ 22 chr5:90562302-90562382 6.74e-03 17_[+2(3.69e-05)]_55 chr6:119487684-119487764 2.76e-02 80 chr1:6336557-6336637 3.67e-03 57_[+3(6.37e-05)]_15 chr14:102394288-10239436 1.17e-01 80 chr12:40013740-40013820 3.76e-02 80 chr16:15262992-15263072 2.76e-03 21_[+5(3.09e-05)]_51 chr22:46852251-46852331 9.95e-03 52_[+4(7.49e-05)]_20 chr1:166672981-166673061 3.40e-01 80 chr10:119522330-11952241 5.72e-02 80 chr1:22301369-22301449 5.13e-02 80 chr9:80442419-80442499 4.81e-02 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n04.farnam.hpc.yale.internal ********************************************************************************