******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/MBD2.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:1123184-1123264 1.0000 80 chr7:6543360-6543440 1.0000 80 chr2:17699749-17699829 1.0000 80 chr10:99393256-99393336 1.0000 80 chr3:126422986-126423066 1.0000 80 chr6:82957488-82957568 1.0000 80 chr14:21458023-21458103 1.0000 80 chr8:145159245-145159325 1.0000 80 chr19:13906050-13906130 1.0000 80 chr13:103451364-10345144 1.0000 80 chr14:23755405-23755485 1.0000 80 chr11:67275733-67275813 1.0000 80 chr19:36193346-36193426 1.0000 80 chr1:151254581-151254661 1.0000 80 chr19:18315092-18315172 1.0000 80 chr19:2945004-2945084 1.0000 80 chr19:54641275-54641355 1.0000 80 chr1:167691120-167691200 1.0000 80 chr20:40247072-40247152 1.0000 80 chr4:48782428-48782508 1.0000 80 chr2:73460450-73460530 1.0000 80 chr12:53473220-53473300 1.0000 80 chr19:14228626-14228706 1.0000 80 chr17:4870674-4870754 1.0000 80 chr19:4328482-4328562 1.0000 80 chr5:32313293-32313373 1.0000 80 chr14:104181843-10418192 1.0000 80 chr15:69113262-69113342 1.0000 80 chr8:11660019-11660099 1.0000 80 chr17:79196826-79196906 1.0000 80 chr8:71314371-71314451 1.0000 80 chr5:172484166-172484246 1.0000 80 chr4:52709112-52709192 1.0000 80 chr17:74667896-74667976 1.0000 80 chr16:90143759-90143839 1.0000 80 chr19:1041092-1041172 1.0000 80 chr20:17662982-17663062 1.0000 80 chr14:68286406-68286486 1.0000 80 chr17:47866560-47866640 1.0000 80 chr16:57769274-57769354 1.0000 80 chr19:50372922-50373002 1.0000 80 chr19:45394292-45394372 1.0000 80 chr17:39943151-39943231 1.0000 80 chr15:90895375-90895455 1.0000 80 chr9:130477970-130478050 1.0000 80 chr17:79980919-79980999 1.0000 80 chr19:19174663-19174743 1.0000 80 chr1:38397520-38397600 1.0000 80 chr16:22385993-22386073 1.0000 80 chr16:22201979-22202059 1.0000 80 chr22:35696156-35696236 1.0000 80 chr15:63481586-63481666 1.0000 80 chr6:160183386-160183466 1.0000 80 chr1:25757220-25757300 1.0000 80 chr16:67217573-67217653 1.0000 80 chr6:112194703-112194783 1.0000 80 chr19:36248868-36248948 1.0000 80 chr11:63953475-63953555 1.0000 80 chr6:80247179-80247259 1.0000 80 chr19:42580168-42580248 1.0000 80 chr19:8408174-8408254 1.0000 80 chr3:149530917-149530997 1.0000 80 chr9:139780759-139780839 1.0000 80 chr4:2845473-2845553 1.0000 80 chr19:4153508-4153588 1.0000 80 chr2:65283370-65283450 1.0000 80 chr13:20532732-20532812 1.0000 80 chr6:32146014-32146094 1.0000 80 chr15:43213055-43213135 1.0000 80 chr19:17420233-17420313 1.0000 80 chr15:98503711-98503791 1.0000 80 chr19:41082676-41082756 1.0000 80 chr17:80325874-80325954 1.0000 80 chr21:47604586-47604666 1.0000 80 chr19:13211016-13211096 1.0000 80 chr7:23053767-23053847 1.0000 80 chr19:1790919-1790999 1.0000 80 chr19:46087714-46087794 1.0000 80 chr16:50059014-50059094 1.0000 80 chr10:99205782-99205862 1.0000 80 chr7:43909097-43909177 1.0000 80 chr6:159527911-159527991 1.0000 80 chr14:75348517-75348597 1.0000 80 chr19:58790206-58790286 1.0000 80 chr9:127905868-127905948 1.0000 80 chr16:50775826-50775906 1.0000 80 chr17:17875887-17875967 1.0000 80 chr1:36851656-36851736 1.0000 80 chr19:46498604-46498684 1.0000 80 chr19:6424991-6425071 1.0000 80 chr8:6565812-6565892 1.0000 80 chr16:2955814-2955894 1.0000 80 chr19:54663620-54663700 1.0000 80 chr11:59383423-59383503 1.0000 80 chr1:24742165-24742245 1.0000 80 chr1:153895525-153895605 1.0000 80 chr17:27139522-27139602 1.0000 80 chr2:88927190-88927270 1.0000 80 chrX:153042222-153042302 1.0000 80 chr9:35072728-35072808 1.0000 80 chr17:38574241-38574321 1.0000 80 chr15:85174568-85174648 1.0000 80 chr19:50269800-50269880 1.0000 80 chrX:49047584-49047664 1.0000 80 chr19:7894863-7894943 1.0000 80 chr11:68228058-68228138 1.0000 80 chr3:113415574-113415654 1.0000 80 chr19:50321417-50321497 1.0000 80 chr6:122720577-122720657 1.0000 80 chr15:75744243-75744323 1.0000 80 chr12:510662-510742 1.0000 80 chr16:1728178-1728258 1.0000 80 chr2:232646022-232646102 1.0000 80 chr19:42773007-42773087 1.0000 80 chr11:124981539-12498161 1.0000 80 chr11:62521653-62521733 1.0000 80 chr19:55964503-55964583 1.0000 80 chr17:58755088-58755168 1.0000 80 chr16:30382012-30382092 1.0000 80 chr19:2841345-2841425 1.0000 80 chr17:73452588-73452668 1.0000 80 chr14:78083212-78083292 1.0000 80 chr7:8008269-8008349 1.0000 80 chr2:106468102-106468182 1.0000 80 chr19:18303767-18303847 1.0000 80 chr3:88108213-88108293 1.0000 80 chr9:37465734-37465814 1.0000 80 chr19:4968805-4968885 1.0000 80 chr16:30645737-30645817 1.0000 80 chr1:151227147-151227227 1.0000 80 chr12:95611441-95611521 1.0000 80 chr11:31531161-31531241 1.0000 80 chr19:50270046-50270126 1.0000 80 chr20:32308124-32308204 1.0000 80 chr19:42901169-42901249 1.0000 80 chr17:76237679-76237759 1.0000 80 chr16:4852965-4853045 1.0000 80 chr17:26368575-26368655 1.0000 80 chrX:46988604-46988684 1.0000 80 chr1:23694873-23694953 1.0000 80 chr19:41284021-41284101 1.0000 80 chr19:9945869-9945949 1.0000 80 chr9:139743710-139743790 1.0000 80 chr9:129987381-129987461 1.0000 80 chr17:46125562-46125642 1.0000 80 chr12:106696392-10669647 1.0000 80 chrX:49125725-49125805 1.0000 80 chr6:37225448-37225528 1.0000 80 chr14:21737659-21737739 1.0000 80 chr2:24270334-24270414 1.0000 80 chr15:64673725-64673805 1.0000 80 chr19:19249303-19249383 1.0000 80 chr19:45873893-45873973 1.0000 80 chr17:61627674-61627754 1.0000 80 chr1:150601683-150601763 1.0000 80 chr1:33938048-33938128 1.0000 80 chr7:100184105-100184185 1.0000 80 chr19:42773210-42773290 1.0000 80 chr22:36784138-36784218 1.0000 80 chr2:73298515-73298595 1.0000 80 chr1:45140255-45140335 1.0000 80 chr11:125933046-12593312 1.0000 80 chr7:99724809-99724889 1.0000 80 chr19:33462889-33462969 1.0000 80 chr7:2595254-2595334 1.0000 80 chr16:74729869-74729949 1.0000 80 chr19:47551923-47552003 1.0000 80 chr1:160068447-160068527 1.0000 80 chr3:179280624-179280704 1.0000 80 chr9:80911922-80912002 1.0000 80 chr12:56211570-56211650 1.0000 80 chr15:89631481-89631561 1.0000 80 chr13:20437856-20437936 1.0000 80 chr19:50096734-50096814 1.0000 80 chr22:41347671-41347751 1.0000 80 chr16:30621741-30621821 1.0000 80 chr1:6052620-6052700 1.0000 80 chr15:86338171-86338251 1.0000 80 chr9:130007474-130007554 1.0000 80 chr3:56591131-56591211 1.0000 80 chr7:100825899-100825979 1.0000 80 chr12:112563226-11256330 1.0000 80 chr21:44394212-44394292 1.0000 80 chr14:23790537-23790617 1.0000 80 chr7:150725417-150725497 1.0000 80 chr14:96001150-96001230 1.0000 80 chr11:46867819-46867899 1.0000 80 chr9:128003754-128003834 1.0000 80 chr19:48281738-48281818 1.0000 80 chr19:14117213-14117293 1.0000 80 chr20:44509750-44509830 1.0000 80 chr12:109535798-10953587 1.0000 80 chr17:45177678-45177758 1.0000 80 chr12:53773562-53773642 1.0000 80 chr4:104119610-104119690 1.0000 80 chr19:10491339-10491419 1.0000 80 chr17:56595357-56595437 1.0000 80 chr22:21400088-21400168 1.0000 80 chr12:56367634-56367714 1.0000 80 chr17:47841577-47841657 1.0000 80 chr19:4472062-4472142 1.0000 80 chr15:83478274-83478354 1.0000 80 chr3:61237165-61237245 1.0000 80 chr5:145583045-145583125 1.0000 80 chr19:33166124-33166204 1.0000 80 chr9:133588093-133588173 1.0000 80 chr17:79212902-79212982 1.0000 80 chr5:137673658-137673738 1.0000 80 chr11:75526136-75526216 1.0000 80 chr19:36505186-36505266 1.0000 80 chr2:97523846-97523926 1.0000 80 chr19:46148898-46148978 1.0000 80 chr12:67662581-67662661 1.0000 80 chr5:31532295-31532375 1.0000 80 chrX:47050091-47050171 1.0000 80 chr1:6845209-6845289 1.0000 80 chr2:64068015-64068095 1.0000 80 chr3:195163897-195163977 1.0000 80 chr1:202830764-202830844 1.0000 80 chr19:10828433-10828513 1.0000 80 chr7:99746379-99746459 1.0000 80 chr1:52195360-52195440 1.0000 80 chr1:153940252-153940332 1.0000 80 chr6:31126217-31126297 1.0000 80 chr10:127511931-12751201 1.0000 80 chr17:57232614-57232694 1.0000 80 chr1:247171387-247171467 1.0000 80 chr22:30988147-30988227 1.0000 80 chr22:40440680-40440760 1.0000 80 chr19:8455127-8455207 1.0000 80 chr19:12662365-12662445 1.0000 80 chr11:560858-560938 1.0000 80 chr1:156308105-156308185 1.0000 80 chr19:49141638-49141718 1.0000 80 chr10:4868262-4868342 1.0000 80 chr19:6372596-6372676 1.0000 80 chr5:150138173-150138253 1.0000 80 chr19:4342866-4342946 1.0000 80 chr11:17298173-17298253 1.0000 80 chr7:43622565-43622645 1.0000 80 chr17:38210647-38210727 1.0000 80 chr10:120101790-12010187 1.0000 80 chrX:47420761-47420841 1.0000 80 chr19:15529865-15529945 1.0000 80 chr16:19566858-19566938 1.0000 80 chr1:43312123-43312203 1.0000 80 chr9:130829733-130829813 1.0000 80 chrX:48958206-48958286 1.0000 80 chr8:42010324-42010404 1.0000 80 chr19:19496382-19496462 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_MBD2/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/MBD2.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.193 C 0.308 G 0.302 T 0.197 Background letter frequencies (from file dataset with add-one prior applied): A 0.193 C 0.308 G 0.302 T 0.197 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCAATSRG MEME-1 width = 8 sites = 130 llr = 1058 E-value = 4.0e-122 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::aa:151 pos.-specific C aa:::511 probability G :::::347 matrix T ::::a1:1 bits 2.4 * * 2.1 *** 1.9 *** 1.7 ***** Relative 1.4 ***** Entropy 1.2 ***** (11.7 bits) 0.9 ***** 0.7 ***** * 0.5 ***** ** 0.2 ******** 0.0 -------- Multilevel CCAATCAG consensus GG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:42010324-42010404 3 1.25e-05 CT CCAATCAG GACTCGGGGT chrX:48958206-48958286 7 1.25e-05 CATCGA CCAATCAG ATCATCACCG chr11:17298173-17298253 37 1.25e-05 GCGAACCGGA CCAATCAG CGGCCGCAGA chr5:150138173-150138253 18 1.25e-05 TCAAGTTTGT CCAATCAG AGGCCGCTCT chr1:153940252-153940332 41 1.25e-05 TCTTCAGCTT CCAATCAG GACTCAGCTT chr15:83478274-83478354 50 1.25e-05 CGGCAGCCAG CCAATCAG AAGTGCCGGG chr15:86338171-86338251 26 1.25e-05 AGAGCAGCAG CCAATCAG AGGCATCGCC chr1:6052620-6052700 64 1.25e-05 TGAACAATAG CCAATCAG AAGCTGGAA chr19:33462889-33462969 56 1.25e-05 CGGCCCTCGA CCAATCAG AGCTAAGGTT chr19:19249303-19249383 44 1.25e-05 TCCCGTCCGA CCAATCAG TGTGTCTTGA chr17:46125562-46125642 40 1.25e-05 CTCTCTGCTG CCAATCAG AGGGACATCC chr1:23694873-23694953 51 1.25e-05 AACCACTCTG CCAATCAG AGGCGGAACA chr20:32308124-32308204 34 1.25e-05 GCATGGAAGA CCAATCAG AGAGCGTACT chr19:2841345-2841425 67 1.25e-05 GCAGCACTGT CCAATCAG AAGCGC chr3:113415574-113415654 20 1.25e-05 ACTCAACCCG CCAATCAG GCTGCGGGAA chr17:38574241-38574321 63 1.25e-05 TTTGAATAAA CCAATCAG GTTAGGGAGG chr9:35072728-35072808 14 1.25e-05 CAGATCACAG CCAATCAG GAAATTCGCT chr11:59383423-59383503 20 1.25e-05 CAGATAAAGG CCAATCAG ACTTTTGGGG chr8:6565812-6565892 41 1.25e-05 CAACGGGCGA CCAATCAG AAGGCGCGTT chr19:46498604-46498684 71 1.25e-05 TAAGCTGTGA CCAATCAG AA chr19:4153508-4153588 55 1.25e-05 ACCCTGTCCA CCAATCAG CACCTGGAGG chr19:19174663-19174743 2 1.25e-05 G CCAATCAG CGATTGGCTT chr19:1041092-1041172 23 1.25e-05 GTCCTGGCAG CCAATCAG ATGCGAGGAC chr16:90143759-90143839 21 1.25e-05 GTGCTGCCAG CCAATCAG CGTTGAGACC chr14:104181843-10418192 7 1.25e-05 GCTACA CCAATCAG AGACGAAGCG chr17:4870674-4870754 47 1.25e-05 AGGCACCCTA CCAATCAG ACCAGGTCAG chr12:53473220-53473300 7 1.25e-05 TCTAAG CCAATCAG CAACGGCCTC chr19:18315092-18315172 44 1.25e-05 GGCGAAGTAG CCAATCAG AGATTGTCTA chr19:36193346-36193426 16 1.25e-05 AGCCTTAGGG CCAATCAG AAGCGACAGC chr3:195163897-195163977 27 2.48e-05 GCAACCCGAG CCAATGAG CAGCGCGACC chr12:67662581-67662661 14 2.48e-05 TCCACGGGAG CCAATGAG GAAGCTACTA chr19:46148898-46148978 25 2.48e-05 CCGTTCAGAA CCAATGAG AGCCTGTCGC chr19:33166124-33166204 12 2.48e-05 CACAGCTGAC CCAATGAG AAACCGTCGT chr19:50270046-50270126 72 2.48e-05 TGCTTGGCGG CCAATGAG A chr19:4968805-4968885 51 2.48e-05 TGCGCCCCCT CCAATGAG AACAGAGCCG chr11:68228058-68228138 55 2.48e-05 GAGAGAGGGG CCAATGAG CCTGGAGCTG chr16:50059014-50059094 59 2.48e-05 GTAGAGGAAT CCAATGAG CGTAGCGGGT chr19:41082676-41082756 52 2.48e-05 AGTCTCTGGC CCAATGAG CAGCCTATGG chr13:20532732-20532812 72 2.48e-05 TCCCCGTCAG CCAATGAg c chr3:149530917-149530997 52 2.48e-05 TGGGTGCGGA CCAATGAG GCGCGTGGGG chr11:63953475-63953555 43 2.48e-05 TCCCCGCTGT CCAATGAG AAGGAAGTGG chr17:79980919-79980999 66 2.48e-05 CGACCCTCAG CCAATGAG CCCGGAG chr8:11660019-11660099 17 2.48e-05 TTCTCGGCCT CCAATGAG CTTCTAGAGT chr1:167691120-167691200 54 2.48e-05 TGCGGGCAGG CCAATGAG CGGACAGCGA chr1:151254581-151254661 3 2.48e-05 GC CCAATGAG CATAAGAGGA chr10:4868262-4868342 22 4.43e-05 GCGCCTCCAG CCAATCGG GGTGCCCGTC chr6:31126217-31126297 45 4.43e-05 CATGAGCTGG CCAATCGG GAACGGCACG chr19:36505186-36505266 25 4.43e-05 CGCCTTCCAC CCAATCGG CGCTCTCACT chr17:56595357-56595437 66 4.43e-05 CAGCCTTTAG CCAATCGG ATGCCTA chr19:45873893-45873973 52 4.43e-05 TAGGGCAGAG CCAATCGG GATACTGCGC chr19:18303767-18303847 8 4.43e-05 AACGTTA CCAATCGG CATGCGGGAC chr17:73452588-73452668 64 4.43e-05 CAAATCCTGA CCAATCGG TGGCCTGAA chr19:50372922-50373002 40 4.43e-05 GACGACAGAC CCAATCGG GAAACGGGAC chr10:120101790-12010187 70 6.35e-05 TGCGTCTCAA CCAATGGG CTG chr11:560858-560938 2 6.35e-05 G CCAATGGG CGCGGGGAGG chr19:10828433-10828513 37 6.35e-05 TGGAACTTCG CCAATGGG CAGAGCCAAC chr9:133588093-133588173 56 6.35e-05 CTCCCACCGG CCAATGGG ACGGAGGAAA chr12:109535798-10953587 3 6.35e-05 AG CCAATGGG AACGCGTCTC chr12:112563226-11256330 30 6.35e-05 ACGGTGTTAT CCAATGGG CCGACAGCTG chr9:80911922-80912002 6 6.35e-05 CGCGA CCAATGGG GATGTGAGCT chr16:74729869-74729949 56 6.35e-05 ctagttctca ccaatggg gtttaagtgc chr2:73298515-73298595 53 6.35e-05 GCCCCGTTGA CCAATGGG AAAAGGGTGA chr19:9945869-9945949 29 6.35e-05 GTTAGGGAGC CCAATGGG CGTCGCCGCC chr19:55964503-55964583 22 6.35e-05 GAGCAGCTGT CCAATGGG AAGGCAGCAC chr16:1728178-1728258 50 6.35e-05 GTCTTGGCGC CCAATGGG CGCTGGCGGG chr16:2955814-2955894 9 6.35e-05 GGGATGGA CCAATGGG CGAGGGATGG chr19:17420233-17420313 6 6.35e-05 GGCAA CCAATGGG CGCATGAGTT chr16:67217573-67217653 6 6.35e-05 AAGAG CCAATGGG GAACCAGAAA chr19:45394292-45394372 13 6.35e-05 GCGCTGCGAG CCAATGGG AAGGGTGGGA chr5:172484166-172484246 52 6.35e-05 GACTTCTGCA CCAATGGG CGTGGGGGAG chr19:6372596-6372676 42 7.93e-05 GAGGTGGCGC CCAATAAG CTCAAGAGAG chr7:99746379-99746459 7 7.93e-05 ATATCA CCAATCAA CGTGCGCCTC chr2:97523846-97523926 24 7.93e-05 CCAAAGCTGA CCAATCAA ACGCCTAGGC chr12:95611441-95611521 29 7.93e-05 ACTCTCTTCT CCAATAAG CGGGCTCGAA chr9:37465734-37465814 38 7.93e-05 TTCGCTGCAA CCAATCAA AACCCTCTGT chr19:36248868-36248948 20 7.93e-05 GGCAGGTTCT CCAATCAA ACACGCCCTG chr1:156308105-156308185 8 9.20e-05 GTAGTCG CCAATCAC CGCACCCATC chr7:150725417-150725497 68 9.20e-05 TGTCTTTTCA CCAATCAC CGCCA chr22:41347671-41347751 28 9.20e-05 GGCTAAGGGG CCAATCAC AGAGCTGCTT chr14:21737659-21737739 57 9.20e-05 ACAATGATAT CCAATCAC AATTAGCAGT chr7:8008269-8008349 40 9.20e-05 TATTCCAGAA CCAATCAC TCGAGTTCTA chr14:78083212-78083292 7 9.20e-05 GCCTGG CCAATCAC GGACGAGAGC chr16:50775826-50775906 45 9.20e-05 ACAGGGAGGC CCAATCAC GGCCCGCTCA chr19:54641275-54641355 3 1.33e-04 GG CCAATCGA ACGCCGCGCC chr3:126422986-126423066 47 1.33e-04 CTGGCGTCGG CCAATAGG ACGTGGCTTT chr17:61627674-61627754 41 1.53e-04 GCCGCAATAA CCAATGAC AAGAAAGAAT chr19:54663620-54663700 47 1.53e-04 CAGATCTGAA CCAATCAT AAGTTGGCCC chr1:52195360-52195440 33 1.93e-04 TGACCCATGG CCAATCGC CAGGGGTCTC chr17:79212902-79212982 70 1.93e-04 GGAGCCTAGG CCAATCCG AAG chr19:41284021-41284101 16 1.93e-04 TCTCACGCCA CCAATCCG CGCCTCTTGT chr6:122720577-122720657 26 1.93e-04 TCAGCAGCAG CCAATCGC TTTTCTCTGT chr19:50269800-50269880 30 1.93e-04 ACAGATCTCG CCAATCCG CGACGCCTGC chr4:2845473-2845553 28 1.93e-04 ATGGGTCCCG CCAATCGC AGGGTACGTT chr16:22385993-22386073 38 1.93e-04 GGGACTTCGT CCAATCGC CTCTCTCCAA chr9:130477970-130478050 41 1.93e-04 CCGCCAACGT CCAATCCG GGCCGGGCTA chr15:69113262-69113342 32 1.93e-04 GCGGCCCGAG CCAATCGC CGCCGAGGGT chr19:4328482-4328562 15 1.93e-04 gactcctccc ccaatccg cccagctcag chr1:43312123-43312203 68 2.18e-04 GTCATGGTAG CCAATGGA AATAA chr22:40440680-40440760 65 2.18e-04 CTCCCTGCGG CCAATGGA GTGGGGCT chr14:23790537-23790617 32 2.18e-04 GTAATATTCC CCAATGGA GTACTAGCTC chr3:56591131-56591211 51 2.18e-04 ACCCCTATAT CCAATTGG CGTAGCGCTT chr19:42773210-42773290 53 2.18e-04 CCCGATGGGC CCAATTGG TCGCCGCGAG chr6:37225448-37225528 31 2.18e-04 ATTCCGGCTC CCAATTGG TCGGCCCGTC chr1:151227147-151227227 48 2.18e-04 GAGCGACGGG CCAATTGG AGGAGTTGTT chr2:106468102-106468182 23 2.18e-04 CGTGATTACG CCAATGGA GCTGTCATTG chr2:232646022-232646102 11 2.18e-04 CCTCCTGGAA CCAATGGA AAGCCAGCCT chr6:159527911-159527991 51 2.18e-04 tagcgggtaa ccaattgg aggcctctaa chr5:31532295-31532375 23 2.83e-04 GACGTCTAGA CCAATCGT CAGCAAAAGA chr12:56211570-56211650 1 2.83e-04 . CCAATCGT TGTCACTCTT chr7:100184105-100184185 34 2.83e-04 CCCCCAAAGA CCAATCGT AAGCCAGATA chr17:27139522-27139602 19 2.83e-04 GTCTGCACAG CCAATGGC GAGCCAGGGA chr19:1790919-1790999 5 2.83e-04 ccga ccaatggc agccacatgc chr4:52709112-52709192 39 2.83e-04 GGCCCCAGGA CCAATCGT ATTGGCCAGT chr14:96001150-96001230 3 2.96e-04 CT CCAATTAA CTAACAAAGC chr17:38210647-38210727 56 3.16e-04 CAAACGCCAA CCAATAGA AATGCAGCAA chr16:30382012-30382092 44 3.16e-04 AAAGAAATAA CCAATAGA AACGCAGGGG chr16:57769274-57769354 15 3.29e-04 ATTGAGTTTT CCAATAAT GCGGACGCTG chr11:75526136-75526216 22 3.67e-04 GACCTTCTAC CCAATAGC ACGCCCCTTT chr3:61237165-61237245 33 3.67e-04 GGAGCGGAGG CCAATACG CGCAGAGCAT chr17:47841577-47841657 25 3.67e-04 TCCACCCCAG CCAATCCA CAGCTTAGCC chr16:30621741-30621821 7 3.67e-04 CCCTCC CCAATACG CGCGTTCATT chr6:32146014-32146094 42 3.67e-04 ACCGTATCAG CCAATAGC CATTGTGCGA chr5:32313293-32313373 52 3.67e-04 TTTCCTCCAA CCAATCCA GAGAGCGTTC chr7:100825899-100825979 28 4.00e-04 TAAGTCCAAG CCACTCAG AAGCAAGTTG chr19:47551923-47552003 54 4.00e-04 TATGCGCTCG CCACTCAG GTCCGGCGTG chr19:42901169-42901249 14 4.00e-04 CCTCCCTGGG CCACTCAG GACCCTTTGC chr1:38397520-38397600 29 4.21e-04 CGGGCCTCCT CCAATCCC CACCGTTTCT chr15:64673725-64673805 20 4.67e-04 TCCCCCTGAA CCAATTGC CAATGCCCAG chr3:88108213-88108293 28 4.67e-04 GTCGATTTCA CCAATAGT AGTGGAAAGG chr5:145583045-145583125 59 5.59e-04 CTCAGGCCTG CCACTCGG CACTGTCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:42010324-42010404 1.2e-05 2_[+1]_70 chrX:48958206-48958286 1.2e-05 6_[+1]_66 chr11:17298173-17298253 1.2e-05 36_[+1]_36 chr5:150138173-150138253 1.2e-05 17_[+1]_55 chr1:153940252-153940332 1.2e-05 40_[+1]_32 chr15:83478274-83478354 1.2e-05 49_[+1]_23 chr15:86338171-86338251 1.2e-05 25_[+1]_47 chr1:6052620-6052700 1.2e-05 63_[+1]_9 chr19:33462889-33462969 1.2e-05 55_[+1]_17 chr19:19249303-19249383 1.2e-05 43_[+1]_29 chr17:46125562-46125642 1.2e-05 39_[+1]_33 chr1:23694873-23694953 1.2e-05 50_[+1]_22 chr20:32308124-32308204 1.2e-05 33_[+1]_39 chr19:2841345-2841425 1.2e-05 66_[+1]_6 chr3:113415574-113415654 1.2e-05 19_[+1]_53 chr17:38574241-38574321 1.2e-05 62_[+1]_10 chr9:35072728-35072808 1.2e-05 13_[+1]_59 chr11:59383423-59383503 1.2e-05 19_[+1]_53 chr8:6565812-6565892 1.2e-05 40_[+1]_32 chr19:46498604-46498684 1.2e-05 70_[+1]_2 chr19:4153508-4153588 1.2e-05 54_[+1]_18 chr19:19174663-19174743 1.2e-05 1_[+1]_71 chr19:1041092-1041172 1.2e-05 22_[+1]_50 chr16:90143759-90143839 1.2e-05 20_[+1]_52 chr14:104181843-10418192 1.2e-05 6_[+1]_66 chr17:4870674-4870754 1.2e-05 46_[+1]_26 chr12:53473220-53473300 1.2e-05 6_[+1]_66 chr19:18315092-18315172 1.2e-05 43_[+1]_29 chr19:36193346-36193426 1.2e-05 15_[+1]_57 chr3:195163897-195163977 2.5e-05 26_[+1]_46 chr12:67662581-67662661 2.5e-05 13_[+1]_59 chr19:46148898-46148978 2.5e-05 24_[+1]_48 chr19:33166124-33166204 2.5e-05 11_[+1]_61 chr19:50270046-50270126 2.5e-05 71_[+1]_1 chr19:4968805-4968885 2.5e-05 50_[+1]_22 chr11:68228058-68228138 2.5e-05 54_[+1]_18 chr16:50059014-50059094 2.5e-05 58_[+1]_14 chr19:41082676-41082756 2.5e-05 51_[+1]_21 chr13:20532732-20532812 2.5e-05 71_[+1]_1 chr3:149530917-149530997 2.5e-05 51_[+1]_21 chr11:63953475-63953555 2.5e-05 42_[+1]_30 chr17:79980919-79980999 2.5e-05 65_[+1]_7 chr8:11660019-11660099 2.5e-05 16_[+1]_56 chr1:167691120-167691200 2.5e-05 53_[+1]_19 chr1:151254581-151254661 2.5e-05 2_[+1]_70 chr10:4868262-4868342 4.4e-05 21_[+1]_51 chr6:31126217-31126297 4.4e-05 44_[+1]_28 chr19:36505186-36505266 4.4e-05 24_[+1]_48 chr17:56595357-56595437 4.4e-05 65_[+1]_7 chr19:45873893-45873973 4.4e-05 51_[+1]_21 chr19:18303767-18303847 4.4e-05 7_[+1]_65 chr17:73452588-73452668 4.4e-05 63_[+1]_9 chr19:50372922-50373002 4.4e-05 39_[+1]_33 chr10:120101790-12010187 6.3e-05 69_[+1]_3 chr11:560858-560938 6.3e-05 1_[+1]_71 chr19:10828433-10828513 6.3e-05 36_[+1]_36 chr9:133588093-133588173 6.3e-05 55_[+1]_17 chr12:109535798-10953587 6.3e-05 2_[+1]_70 chr12:112563226-11256330 6.3e-05 29_[+1]_43 chr9:80911922-80912002 6.3e-05 5_[+1]_67 chr16:74729869-74729949 6.3e-05 55_[+1]_17 chr2:73298515-73298595 6.3e-05 52_[+1]_20 chr19:9945869-9945949 6.3e-05 28_[+1]_44 chr19:55964503-55964583 6.3e-05 21_[+1]_51 chr16:1728178-1728258 6.3e-05 49_[+1]_23 chr16:2955814-2955894 6.3e-05 8_[+1]_64 chr19:17420233-17420313 6.3e-05 5_[+1]_67 chr16:67217573-67217653 6.3e-05 5_[+1]_67 chr19:45394292-45394372 6.3e-05 12_[+1]_60 chr5:172484166-172484246 6.3e-05 51_[+1]_21 chr19:6372596-6372676 7.9e-05 41_[+1]_31 chr7:99746379-99746459 7.9e-05 6_[+1]_66 chr2:97523846-97523926 7.9e-05 23_[+1]_49 chr12:95611441-95611521 7.9e-05 28_[+1]_44 chr9:37465734-37465814 7.9e-05 37_[+1]_35 chr19:36248868-36248948 7.9e-05 19_[+1]_53 chr1:156308105-156308185 9.2e-05 7_[+1]_65 chr7:150725417-150725497 9.2e-05 67_[+1]_5 chr22:41347671-41347751 9.2e-05 27_[+1]_45 chr14:21737659-21737739 9.2e-05 56_[+1]_16 chr7:8008269-8008349 9.2e-05 39_[+1]_33 chr14:78083212-78083292 9.2e-05 6_[+1]_66 chr16:50775826-50775906 9.2e-05 44_[+1]_28 chr19:54641275-54641355 0.00013 2_[+1]_70 chr3:126422986-126423066 0.00013 46_[+1]_26 chr17:61627674-61627754 0.00015 40_[+1]_32 chr19:54663620-54663700 0.00015 46_[+1]_26 chr1:52195360-52195440 0.00019 32_[+1]_40 chr17:79212902-79212982 0.00019 69_[+1]_3 chr19:41284021-41284101 0.00019 15_[+1]_57 chr6:122720577-122720657 0.00019 25_[+1]_47 chr19:50269800-50269880 0.00019 29_[+1]_43 chr4:2845473-2845553 0.00019 27_[+1]_45 chr16:22385993-22386073 0.00019 37_[+1]_35 chr9:130477970-130478050 0.00019 40_[+1]_32 chr15:69113262-69113342 0.00019 31_[+1]_41 chr19:4328482-4328562 0.00019 14_[+1]_58 chr1:43312123-43312203 0.00022 67_[+1]_5 chr22:40440680-40440760 0.00022 64_[+1]_8 chr14:23790537-23790617 0.00022 31_[+1]_41 chr3:56591131-56591211 0.00022 50_[+1]_22 chr19:42773210-42773290 0.00022 52_[+1]_20 chr6:37225448-37225528 0.00022 30_[+1]_42 chr1:151227147-151227227 0.00022 47_[+1]_25 chr2:106468102-106468182 0.00022 22_[+1]_50 chr2:232646022-232646102 0.00022 10_[+1]_62 chr6:159527911-159527991 0.00022 50_[+1]_22 chr5:31532295-31532375 0.00028 22_[+1]_50 chr12:56211570-56211650 0.00028 [+1]_72 chr7:100184105-100184185 0.00028 33_[+1]_39 chr17:27139522-27139602 0.00028 18_[+1]_54 chr19:1790919-1790999 0.00028 4_[+1]_68 chr4:52709112-52709192 0.00028 38_[+1]_34 chr14:96001150-96001230 0.0003 2_[+1]_70 chr17:38210647-38210727 0.00032 55_[+1]_17 chr16:30382012-30382092 0.00032 43_[+1]_29 chr16:57769274-57769354 0.00033 14_[+1]_58 chr11:75526136-75526216 0.00037 21_[+1]_51 chr3:61237165-61237245 0.00037 32_[+1]_40 chr17:47841577-47841657 0.00037 24_[+1]_48 chr16:30621741-30621821 0.00037 6_[+1]_66 chr6:32146014-32146094 0.00037 41_[+1]_31 chr5:32313293-32313373 0.00037 51_[+1]_21 chr7:100825899-100825979 0.0004 27_[+1]_45 chr19:47551923-47552003 0.0004 53_[+1]_19 chr19:42901169-42901249 0.0004 13_[+1]_59 chr1:38397520-38397600 0.00042 28_[+1]_44 chr15:64673725-64673805 0.00047 19_[+1]_53 chr3:88108213-88108293 0.00047 27_[+1]_45 chr5:145583045-145583125 0.00056 58_[+1]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAATSRG width=8 seqs=130 chr8:42010324-42010404 ( 3) CCAATCAG 1 chrX:48958206-48958286 ( 7) CCAATCAG 1 chr11:17298173-17298253 ( 37) CCAATCAG 1 chr5:150138173-150138253 ( 18) CCAATCAG 1 chr1:153940252-153940332 ( 41) CCAATCAG 1 chr15:83478274-83478354 ( 50) CCAATCAG 1 chr15:86338171-86338251 ( 26) CCAATCAG 1 chr1:6052620-6052700 ( 64) CCAATCAG 1 chr19:33462889-33462969 ( 56) CCAATCAG 1 chr19:19249303-19249383 ( 44) CCAATCAG 1 chr17:46125562-46125642 ( 40) CCAATCAG 1 chr1:23694873-23694953 ( 51) CCAATCAG 1 chr20:32308124-32308204 ( 34) CCAATCAG 1 chr19:2841345-2841425 ( 67) CCAATCAG 1 chr3:113415574-113415654 ( 20) CCAATCAG 1 chr17:38574241-38574321 ( 63) CCAATCAG 1 chr9:35072728-35072808 ( 14) CCAATCAG 1 chr11:59383423-59383503 ( 20) CCAATCAG 1 chr8:6565812-6565892 ( 41) CCAATCAG 1 chr19:46498604-46498684 ( 71) CCAATCAG 1 chr19:4153508-4153588 ( 55) CCAATCAG 1 chr19:19174663-19174743 ( 2) CCAATCAG 1 chr19:1041092-1041172 ( 23) CCAATCAG 1 chr16:90143759-90143839 ( 21) CCAATCAG 1 chr14:104181843-10418192 ( 7) CCAATCAG 1 chr17:4870674-4870754 ( 47) CCAATCAG 1 chr12:53473220-53473300 ( 7) CCAATCAG 1 chr19:18315092-18315172 ( 44) CCAATCAG 1 chr19:36193346-36193426 ( 16) CCAATCAG 1 chr3:195163897-195163977 ( 27) CCAATGAG 1 chr12:67662581-67662661 ( 14) CCAATGAG 1 chr19:46148898-46148978 ( 25) CCAATGAG 1 chr19:33166124-33166204 ( 12) CCAATGAG 1 chr19:50270046-50270126 ( 72) CCAATGAG 1 chr19:4968805-4968885 ( 51) CCAATGAG 1 chr11:68228058-68228138 ( 55) CCAATGAG 1 chr16:50059014-50059094 ( 59) CCAATGAG 1 chr19:41082676-41082756 ( 52) CCAATGAG 1 chr13:20532732-20532812 ( 72) CCAATGAG 1 chr3:149530917-149530997 ( 52) CCAATGAG 1 chr11:63953475-63953555 ( 43) CCAATGAG 1 chr17:79980919-79980999 ( 66) CCAATGAG 1 chr8:11660019-11660099 ( 17) CCAATGAG 1 chr1:167691120-167691200 ( 54) CCAATGAG 1 chr1:151254581-151254661 ( 3) CCAATGAG 1 chr10:4868262-4868342 ( 22) CCAATCGG 1 chr6:31126217-31126297 ( 45) CCAATCGG 1 chr19:36505186-36505266 ( 25) CCAATCGG 1 chr17:56595357-56595437 ( 66) CCAATCGG 1 chr19:45873893-45873973 ( 52) CCAATCGG 1 chr19:18303767-18303847 ( 8) CCAATCGG 1 chr17:73452588-73452668 ( 64) CCAATCGG 1 chr19:50372922-50373002 ( 40) CCAATCGG 1 chr10:120101790-12010187 ( 70) CCAATGGG 1 chr11:560858-560938 ( 2) CCAATGGG 1 chr19:10828433-10828513 ( 37) CCAATGGG 1 chr9:133588093-133588173 ( 56) CCAATGGG 1 chr12:109535798-10953587 ( 3) CCAATGGG 1 chr12:112563226-11256330 ( 30) CCAATGGG 1 chr9:80911922-80912002 ( 6) CCAATGGG 1 chr16:74729869-74729949 ( 56) CCAATGGG 1 chr2:73298515-73298595 ( 53) CCAATGGG 1 chr19:9945869-9945949 ( 29) CCAATGGG 1 chr19:55964503-55964583 ( 22) CCAATGGG 1 chr16:1728178-1728258 ( 50) CCAATGGG 1 chr16:2955814-2955894 ( 9) CCAATGGG 1 chr19:17420233-17420313 ( 6) CCAATGGG 1 chr16:67217573-67217653 ( 6) CCAATGGG 1 chr19:45394292-45394372 ( 13) CCAATGGG 1 chr5:172484166-172484246 ( 52) CCAATGGG 1 chr19:6372596-6372676 ( 42) CCAATAAG 1 chr7:99746379-99746459 ( 7) CCAATCAA 1 chr2:97523846-97523926 ( 24) CCAATCAA 1 chr12:95611441-95611521 ( 29) CCAATAAG 1 chr9:37465734-37465814 ( 38) CCAATCAA 1 chr19:36248868-36248948 ( 20) CCAATCAA 1 chr1:156308105-156308185 ( 8) CCAATCAC 1 chr7:150725417-150725497 ( 68) CCAATCAC 1 chr22:41347671-41347751 ( 28) CCAATCAC 1 chr14:21737659-21737739 ( 57) CCAATCAC 1 chr7:8008269-8008349 ( 40) CCAATCAC 1 chr14:78083212-78083292 ( 7) CCAATCAC 1 chr16:50775826-50775906 ( 45) CCAATCAC 1 chr19:54641275-54641355 ( 3) CCAATCGA 1 chr3:126422986-126423066 ( 47) CCAATAGG 1 chr17:61627674-61627754 ( 41) CCAATGAC 1 chr19:54663620-54663700 ( 47) CCAATCAT 1 chr1:52195360-52195440 ( 33) CCAATCGC 1 chr17:79212902-79212982 ( 70) CCAATCCG 1 chr19:41284021-41284101 ( 16) CCAATCCG 1 chr6:122720577-122720657 ( 26) CCAATCGC 1 chr19:50269800-50269880 ( 30) CCAATCCG 1 chr4:2845473-2845553 ( 28) CCAATCGC 1 chr16:22385993-22386073 ( 38) CCAATCGC 1 chr9:130477970-130478050 ( 41) CCAATCCG 1 chr15:69113262-69113342 ( 32) CCAATCGC 1 chr19:4328482-4328562 ( 15) CCAATCCG 1 chr1:43312123-43312203 ( 68) CCAATGGA 1 chr22:40440680-40440760 ( 65) CCAATGGA 1 chr14:23790537-23790617 ( 32) CCAATGGA 1 chr3:56591131-56591211 ( 51) CCAATTGG 1 chr19:42773210-42773290 ( 53) CCAATTGG 1 chr6:37225448-37225528 ( 31) CCAATTGG 1 chr1:151227147-151227227 ( 48) CCAATTGG 1 chr2:106468102-106468182 ( 23) CCAATGGA 1 chr2:232646022-232646102 ( 11) CCAATGGA 1 chr6:159527911-159527991 ( 51) CCAATTGG 1 chr5:31532295-31532375 ( 23) CCAATCGT 1 chr12:56211570-56211650 ( 1) CCAATCGT 1 chr7:100184105-100184185 ( 34) CCAATCGT 1 chr17:27139522-27139602 ( 19) CCAATGGC 1 chr19:1790919-1790999 ( 5) CCAATGGC 1 chr4:52709112-52709192 ( 39) CCAATCGT 1 chr14:96001150-96001230 ( 3) CCAATTAA 1 chr17:38210647-38210727 ( 56) CCAATAGA 1 chr16:30382012-30382092 ( 44) CCAATAGA 1 chr16:57769274-57769354 ( 15) CCAATAAT 1 chr11:75526136-75526216 ( 22) CCAATAGC 1 chr3:61237165-61237245 ( 33) CCAATACG 1 chr17:47841577-47841657 ( 25) CCAATCCA 1 chr16:30621741-30621821 ( 7) CCAATACG 1 chr6:32146014-32146094 ( 42) CCAATAGC 1 chr5:32313293-32313373 ( 52) CCAATCCA 1 chr7:100825899-100825979 ( 28) CCACTCAG 1 chr19:47551923-47552003 ( 54) CCACTCAG 1 chr19:42901169-42901249 ( 14) CCACTCAG 1 chr1:38397520-38397600 ( 29) CCAATCCC 1 chr15:64673725-64673805 ( 20) CCAATTGC 1 chr3:88108213-88108293 ( 28) CCAATAGT 1 chr5:145583045-145583125 ( 59) CCACTCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.46222 E= 4.0e-122 -1367 170 -1367 -1367 -1367 170 -1367 -1367 237 -1367 -1367 -1367 233 -332 -1367 -1367 -1367 -1367 -1367 234 -119 82 6 -187 137 -200 49 -1367 -74 -108 118 -187 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 130 E= 4.0e-122 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.969231 0.030769 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.084615 0.546154 0.315385 0.053846 0.500000 0.076923 0.423077 0.000000 0.115385 0.146154 0.684615 0.053846 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAATSRG MEME-1 regular expression -------------------------------------------------------------------------------- CCAAT[CG][AG]G -------------------------------------------------------------------------------- Time 5.63 secs. ******************************************************************************** ******************************************************************************** MOTIF SATTGGYY MEME-2 width = 8 sites = 108 llr = 857 E-value = 4.4e-077 ******************************************************************************** -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 Description -------------------------------------------------------------------------------- Simplified A :9::::1: pos.-specific C 3:::::64 probability G 51::aa:1 matrix T 2:aa::34 bits 2.4 ** 2.1 ** 1.9 *** 1.7 ***** Relative 1.4 ***** Entropy 1.2 ***** (11.5 bits) 0.9 ***** 0.7 ***** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GATTGGCC consensus C TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:8455127-8455207 29 1.25e-05 TTCCATCTCT GATTGGCT TCGCTGGGTG chr19:10491339-10491419 67 1.25e-05 ACTCAGCCGC GATTGGCT GAGTCG chr19:50096734-50096814 21 1.25e-05 CGAGGCAGCT GATTGGCT GTTGAAAGTT chr3:179280624-179280704 36 1.25e-05 GCCGCATTCT GATTGGCT AGACTTAGGC chr17:76237679-76237759 28 1.25e-05 CTCACCCTCT GATTGGCT AGTTGACTCC chr2:106468102-106468182 40 1.25e-05 AGCTGTCATT GATTGGCT GTCCCTCTGA chr17:58755088-58755168 67 1.25e-05 TTGCTTCTGG GATTGGCT AGAGGG chr6:160183386-160183466 16 1.25e-05 CTCGTGCTTG GATTGGCT CCCGGGGTAG chr19:19174663-19174743 11 1.25e-05 GCCAATCAGC GATTGGCT TTAGGGGCTG chr8:71314371-71314451 16 1.25e-05 CGGTCCGCAC GATTGGCT CACCGACACC chr6:82957488-82957568 53 1.25e-05 GTCTCTTGAT GATTGGCT GGTGCCTGCC chr19:4342866-4342946 65 2.05e-05 AGTTGACACG GATTGGTT GGTGCGGG chr11:31531161-31531241 24 2.05e-05 TACGCCTTCC GATTGGTT GGCTCGGGAC chr11:59383423-59383503 2 2.05e-05 T GATTGGTT CAGATAAAGG chr1:36851656-36851736 24 2.05e-05 TCCGATTGAG GATTGGTT CAGGGTGGGG chr6:159527911-159527991 17 2.05e-05 ttcagcctct gattggtt gggggcccat chr19:1790919-1790999 42 2.05e-05 tggccatggt gattggtt cagagaaggg chr10:120101790-12010187 50 5.29e-05 CGCGCCTTCT CATTGGCT CCTGCGTCTC chr17:57232614-57232694 13 5.29e-05 ATCTCGCACT CATTGGCT CCTCCGTTCC chr17:45177678-45177758 39 5.29e-05 TCGTGAGCGC CATTGGCT GACTGATGGT chr9:128003754-128003834 51 5.29e-05 CCAGCTGATT CATTGGCT GCTATTCGTT chr13:20437856-20437936 33 5.29e-05 TGGGCACGCC CATTGGCT CCGACGGCCG chr19:47551923-47552003 37 5.29e-05 ATGGCTTACC CATTGGCT ATGCGCTCGC chr19:33462889-33462969 33 5.29e-05 CCACGTCGGC CATTGGCT CAGCTCGGCC chr1:45140255-45140335 54 5.29e-05 GACCCGCAGC CATTGGCT AATTCGCTTG chr19:45873893-45873973 15 5.29e-05 ATTACGAGAC CATTGGCT AACCTGCCCG chr19:42773007-42773087 21 5.29e-05 CCTTTCATTT CATTGGCT ACTGTCCCTC chr6:122720577-122720657 62 5.29e-05 CGGCTCCTGG GATTGGCC AGGGACGGGA chrX:49047584-49047664 70 5.29e-05 ACCTCCCTCC CATTGGCT CTT chr2:88927190-88927270 62 5.29e-05 TCCTACAACA GATTGGCC ATCGCGGTGG chr9:127905868-127905948 10 5.29e-05 CTCGGCTCC CATTGGCT AGAGCAGTAG chr15:98503711-98503791 34 5.29e-05 GGAGCCTCCC GATTGGCC AACACTCCCT chr19:42580168-42580248 41 5.29e-05 CATGAACGTC GATTGGCC GAACGGCAGG chr6:80247179-80247259 17 5.29e-05 CCCGAGCTCC CATTGGCT TCTGTCTCCA chr1:25757220-25757300 55 5.29e-05 CGGGCCCTGG GATTGGCC GACAGCGGTT chr15:63481586-63481666 69 5.29e-05 AGCCCTCGCC GATTGGCC GCAC chr17:79196826-79196906 9 5.29e-05 CGACTCCG GATTGGCC CTTCACGCTC chr8:11660019-11660099 63 5.29e-05 TTCCGCGACT GATTGGCC GGGGTCTTCC chr11:67275733-67275813 51 5.29e-05 AACCGCCGCC GATTGGCC TCCGCCTTCC chr14:23755405-23755485 32 5.29e-05 CTGGGCTGGC CATTGGCT GCGTGGGTCT chr13:103451364-10345144 8 5.29e-05 GCGAGGG GATTGGCC CGTGCGTCGG chr10:99393256-99393336 21 5.29e-05 TCCCGCTGCC CATTGGCT GTTACCTAGG chr17:38210647-38210727 30 8.17e-05 GCTCACTTTC TATTGGCT GGGAGTAACA chr17:47841577-47841657 60 8.17e-05 TCCTGAGGAT GATTGGTC GATGAGCCTA chr12:56367634-56367714 30 8.17e-05 TCTCCCTCGC TATTGGCT TGTGGCCCCG chr22:21400088-21400168 40 8.17e-05 AGCGCGTCGC TATTGGCT GTGGGGGGTG chr3:56591131-56591211 13 8.17e-05 GCCCCACCCT GATTGGTC CACTTGCTCA chr1:33938048-33938128 56 8.17e-05 ATGACATATC TATTGGCT GAAGACGTCT chr2:24270334-24270414 43 8.17e-05 TGGCCCCGTC TATTGGCT TTTGAATATG chrX:49125725-49125805 13 8.17e-05 TTAGCCTTCG TATTGGCT AGCTCCACCT chr9:139743710-139743790 11 8.17e-05 ACTGGATTGC GATTGGTC AGCACGTGCC chr19:18303767-18303847 46 8.17e-05 TCTTTTTTCC GATTGGTC CGTGAAGCTC chr11:62521653-62521733 35 8.17e-05 CCCTGTCACG GATTGGTC CGCTCTCCAC chr16:57769274-57769354 32 8.17e-05 TGCGGACGCT GATTGGTC AATCCAGGAC chr17:47866560-47866640 37 8.17e-05 CTCCTCTCCT GATTGGTC GAGGTTGGCA chr19:1041092-1041172 59 8.17e-05 GTTGCGCTCC CATTGGTT TACTCCACCC chr14:21458023-21458103 2 8.17e-05 T TATTGGCT GCTGGCAAAC chr2:64068015-64068095 11 1.07e-04 CCACACGTCT CATTGGCC AGAGCCTGCG chr16:4852965-4853045 21 1.07e-04 CGCGCTCACT CATTGGCC GGCAGGACAG chr19:58790206-58790286 71 1.07e-04 CGGAGACTCC CATTGGCC GA chr10:99205782-99205862 6 1.07e-04 TTTCT CATTGGCC AAACCCAGGC chr17:80325874-80325954 59 1.07e-04 gcatgtcgcc tattggtt gttgggcagg chr17:39943151-39943231 1 1.07e-04 . CATTGGCC CCGGGGACTG chr19:14228626-14228706 14 1.07e-04 CGCCGCCTCC CATTGGCC CTCCCGCGAC chr9:130829733-130829813 58 1.32e-04 TTCGCCTGAT CATTGGTC TAAAATTGTG chr1:202830764-202830844 51 1.32e-04 CTCTCTCCGC TATTGGCC AGCCGCTTAC chr5:145583045-145583125 9 1.32e-04 AGCCTTTT CATTGGTC TTGCCCTCAG chr17:56595357-56595437 28 1.32e-04 CGACCCCACT CATTGGTC GAGTCGGGCA chr20:44509750-44509830 41 1.32e-04 ATTCCTCAGA CATTGGTC CGAGTCACTG chr12:56211570-56211650 47 1.32e-04 CAGCTCTTCC CATTGGTC AATAGCTGAC chr22:36784138-36784218 42 1.32e-04 TGGGCAGACG TATTGGCC TGTGGAAAGG chr19:50269800-50269880 66 1.32e-04 TCTACCCGTT CATTGGTC CCAGTCA chr19:46087714-46087794 41 1.32e-04 AACCCCCCAC TATTGGCC ACTGGACTTT chr20:40247072-40247152 52 1.32e-04 AACACAGACC CATTGGTC ATCCCGGCTG chr19:4472062-4472142 27 1.41e-04 CCTCTGTTCT TATTGGTC GCCTCCCTTC chr11:46867819-46867899 37 1.41e-04 CCTCGTTCTT TATTGGTC CTCGACGGAC chr2:73460450-73460530 51 1.41e-04 GCCTACTTCC TATTGGTC GAGAGAAGTG chr14:68286406-68286486 44 1.48e-04 GCCGGCCTCT GATTGGAT ACAGTAGCCA chr1:247171387-247171467 21 1.69e-04 CTGCACGCCT GATTGGAC AGTTCTCACG chr1:6845209-6845289 22 1.69e-04 GGCCCGTCCT GATTGGAC AGTTCTTTCG chr19:2945004-2945084 13 1.69e-04 TGGAGACTCT GATTGGAC AGTGCTGTCG chr16:1728178-1728258 33 1.88e-04 GCGGAGGGAT GATTGGCG TCTTGGCGCC chr1:151227147-151227227 28 2.05e-04 CGAGGTCTGT GATTGGTG AAGAGCGACG chr3:126422986-126423066 23 2.05e-04 AGCGCCACCC GATTGGTG AAGCCTCTGG chr16:30621741-30621821 21 2.18e-04 TACGCGCGTT CATTGGAC GAGAGCCGAA chr7:8008269-8008349 5 2.18e-04 TTGT CATTGGAC ACTGCTTCTC chr6:112194703-112194783 58 2.37e-04 GAGCCGCAAC CATTGGCG CCTGGGGCGT chr19:12662365-12662445 16 2.58e-04 CAGTGCCCCT GATTGGGT GATGATTCAA chr17:79212902-79212982 40 3.15e-04 CGGGCCCTGA GGTTGGCT TCGTAAACAA chr9:133588093-133588173 19 3.15e-04 CGCCGAACAC GGTTGGCT GGGAGATCCA chr3:88108213-88108293 59 3.15e-04 GCATGAACAT GATTGGCA GCTTGCGTCT chr2:232646022-232646102 33 3.15e-04 CAGCCTTGGC GATTGGCA TCTCAACCAG chr12:510662-510742 51 3.15e-04 AGGCCCTTCC CATTGGTG CGCATTCCAA chr15:43213055-43213135 60 3.15e-04 TCGCAGCGTC GGTTGGCT AGTCCCATTG chr9:139780759-139780839 33 3.15e-04 CGGGCTCGCT GGTTGGCT CCGGCGTCAG chr17:74667896-74667976 32 3.15e-04 CTTCGCGGCA GATTGGCA GGTGCTTGAA chr1:43312123-43312203 22 3.43e-04 GGTCAAAGCT TATTGGTG GTCCTGCCAG chr2:65283370-65283450 39 3.43e-04 AGCGTCCACG TATTGGTG GAGCCGCGGA chr16:30645737-30645817 45 3.75e-04 GGTGTGCGGT GATTGGGC CGCGGAGGGC chr7:43622565-43622645 34 4.38e-04 cgtggggagg ggttggcc ggggccagaa chr12:53773562-53773642 48 4.38e-04 CCCGGATTCT GGTTGGCC GTTGTTCTGT chr19:4968805-4968885 14 5.07e-04 GCTGCCGTCG GGTTGGTC GCGGCAGCCT chr4:48782428-48782508 31 5.07e-04 CCTTTTCCCG GGTTGGTC TTCCCTCTAA chr17:46125562-46125642 21 5.26e-04 TACACTCAGC CATTGGGC CCTCTCTGCT chr20:17662982-17663062 69 5.26e-04 CGGCGGCGGC CATTGGGC AGAG chr22:41347671-41347751 1 5.71e-04 . TGTTGGTT TCGCTGTGAG chr16:50775826-50775906 16 6.60e-04 GGCTGGCAGC CATTGGAG GAAGGTCTGT chr15:75744243-75744323 10 6.88e-04 AACCCCGCC TATTGGAG ACGGACTGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:8455127-8455207 1.3e-05 28_[+2]_44 chr19:10491339-10491419 1.3e-05 66_[+2]_6 chr19:50096734-50096814 1.3e-05 20_[+2]_52 chr3:179280624-179280704 1.3e-05 35_[+2]_37 chr17:76237679-76237759 1.3e-05 27_[+2]_45 chr2:106468102-106468182 1.3e-05 39_[+2]_33 chr17:58755088-58755168 1.3e-05 66_[+2]_6 chr6:160183386-160183466 1.3e-05 15_[+2]_57 chr19:19174663-19174743 1.3e-05 10_[+2]_62 chr8:71314371-71314451 1.3e-05 15_[+2]_57 chr6:82957488-82957568 1.3e-05 52_[+2]_20 chr19:4342866-4342946 2.1e-05 64_[+2]_8 chr11:31531161-31531241 2.1e-05 23_[+2]_49 chr11:59383423-59383503 2.1e-05 1_[+2]_71 chr1:36851656-36851736 2.1e-05 23_[+2]_49 chr6:159527911-159527991 2.1e-05 16_[+2]_56 chr19:1790919-1790999 2.1e-05 41_[+2]_31 chr10:120101790-12010187 5.3e-05 49_[+2]_23 chr17:57232614-57232694 5.3e-05 12_[+2]_60 chr17:45177678-45177758 5.3e-05 38_[+2]_34 chr9:128003754-128003834 5.3e-05 50_[+2]_22 chr13:20437856-20437936 5.3e-05 32_[+2]_40 chr19:47551923-47552003 5.3e-05 36_[+2]_36 chr19:33462889-33462969 5.3e-05 32_[+2]_40 chr1:45140255-45140335 5.3e-05 53_[+2]_19 chr19:45873893-45873973 5.3e-05 14_[+2]_58 chr19:42773007-42773087 5.3e-05 20_[+2]_52 chr6:122720577-122720657 5.3e-05 61_[+2]_11 chrX:49047584-49047664 5.3e-05 69_[+2]_3 chr2:88927190-88927270 5.3e-05 61_[+2]_11 chr9:127905868-127905948 5.3e-05 9_[+2]_63 chr15:98503711-98503791 5.3e-05 33_[+2]_39 chr19:42580168-42580248 5.3e-05 40_[+2]_32 chr6:80247179-80247259 5.3e-05 16_[+2]_56 chr1:25757220-25757300 5.3e-05 54_[+2]_18 chr15:63481586-63481666 5.3e-05 68_[+2]_4 chr17:79196826-79196906 5.3e-05 8_[+2]_64 chr8:11660019-11660099 5.3e-05 62_[+2]_10 chr11:67275733-67275813 5.3e-05 50_[+2]_22 chr14:23755405-23755485 5.3e-05 31_[+2]_41 chr13:103451364-10345144 5.3e-05 7_[+2]_65 chr10:99393256-99393336 5.3e-05 20_[+2]_52 chr17:38210647-38210727 8.2e-05 29_[+2]_43 chr17:47841577-47841657 8.2e-05 59_[+2]_13 chr12:56367634-56367714 8.2e-05 29_[+2]_43 chr22:21400088-21400168 8.2e-05 39_[+2]_33 chr3:56591131-56591211 8.2e-05 12_[+2]_60 chr1:33938048-33938128 8.2e-05 55_[+2]_17 chr2:24270334-24270414 8.2e-05 42_[+2]_30 chrX:49125725-49125805 8.2e-05 12_[+2]_60 chr9:139743710-139743790 8.2e-05 10_[+2]_62 chr19:18303767-18303847 8.2e-05 45_[+2]_27 chr11:62521653-62521733 8.2e-05 34_[+2]_38 chr16:57769274-57769354 8.2e-05 31_[+2]_41 chr17:47866560-47866640 8.2e-05 36_[+2]_36 chr19:1041092-1041172 8.2e-05 58_[+2]_14 chr14:21458023-21458103 8.2e-05 1_[+2]_71 chr2:64068015-64068095 0.00011 10_[+2]_62 chr16:4852965-4853045 0.00011 20_[+2]_52 chr19:58790206-58790286 0.00011 70_[+2]_2 chr10:99205782-99205862 0.00011 5_[+2]_67 chr17:80325874-80325954 0.00011 58_[+2]_14 chr17:39943151-39943231 0.00011 [+2]_72 chr19:14228626-14228706 0.00011 13_[+2]_59 chr9:130829733-130829813 0.00013 57_[+2]_15 chr1:202830764-202830844 0.00013 50_[+2]_22 chr5:145583045-145583125 0.00013 8_[+2]_64 chr17:56595357-56595437 0.00013 27_[+2]_45 chr20:44509750-44509830 0.00013 40_[+2]_32 chr12:56211570-56211650 0.00013 46_[+2]_26 chr22:36784138-36784218 0.00013 41_[+2]_31 chr19:50269800-50269880 0.00013 65_[+2]_7 chr19:46087714-46087794 0.00013 40_[+2]_32 chr20:40247072-40247152 0.00013 51_[+2]_21 chr19:4472062-4472142 0.00014 26_[+2]_46 chr11:46867819-46867899 0.00014 36_[+2]_36 chr2:73460450-73460530 0.00014 50_[+2]_22 chr14:68286406-68286486 0.00015 43_[+2]_29 chr1:247171387-247171467 0.00017 20_[+2]_52 chr1:6845209-6845289 0.00017 21_[+2]_51 chr19:2945004-2945084 0.00017 12_[+2]_60 chr16:1728178-1728258 0.00019 32_[+2]_40 chr1:151227147-151227227 0.00021 27_[+2]_45 chr3:126422986-126423066 0.00021 22_[+2]_50 chr16:30621741-30621821 0.00022 20_[+2]_52 chr7:8008269-8008349 0.00022 4_[+2]_68 chr6:112194703-112194783 0.00024 57_[+2]_15 chr19:12662365-12662445 0.00026 15_[+2]_57 chr17:79212902-79212982 0.00031 39_[+2]_33 chr9:133588093-133588173 0.00031 18_[+2]_54 chr3:88108213-88108293 0.00031 58_[+2]_14 chr2:232646022-232646102 0.00031 32_[+2]_40 chr12:510662-510742 0.00031 50_[+2]_22 chr15:43213055-43213135 0.00031 59_[+2]_13 chr9:139780759-139780839 0.00031 32_[+2]_40 chr17:74667896-74667976 0.00031 31_[+2]_41 chr1:43312123-43312203 0.00034 21_[+2]_51 chr2:65283370-65283450 0.00034 38_[+2]_34 chr16:30645737-30645817 0.00037 44_[+2]_28 chr7:43622565-43622645 0.00044 33_[+2]_39 chr12:53773562-53773642 0.00044 47_[+2]_25 chr19:4968805-4968885 0.00051 13_[+2]_59 chr4:48782428-48782508 0.00051 30_[+2]_42 chr17:46125562-46125642 0.00053 20_[+2]_52 chr20:17662982-17663062 0.00053 68_[+2]_4 chr22:41347671-41347751 0.00057 [+2]_72 chr16:50775826-50775906 0.00066 15_[+2]_57 chr15:75744243-75744323 0.00069 9_[+2]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SATTGGYY width=8 seqs=108 chr19:8455127-8455207 ( 29) GATTGGCT 1 chr19:10491339-10491419 ( 67) GATTGGCT 1 chr19:50096734-50096814 ( 21) GATTGGCT 1 chr3:179280624-179280704 ( 36) GATTGGCT 1 chr17:76237679-76237759 ( 28) GATTGGCT 1 chr2:106468102-106468182 ( 40) GATTGGCT 1 chr17:58755088-58755168 ( 67) GATTGGCT 1 chr6:160183386-160183466 ( 16) GATTGGCT 1 chr19:19174663-19174743 ( 11) GATTGGCT 1 chr8:71314371-71314451 ( 16) GATTGGCT 1 chr6:82957488-82957568 ( 53) GATTGGCT 1 chr19:4342866-4342946 ( 65) GATTGGTT 1 chr11:31531161-31531241 ( 24) GATTGGTT 1 chr11:59383423-59383503 ( 2) GATTGGTT 1 chr1:36851656-36851736 ( 24) GATTGGTT 1 chr6:159527911-159527991 ( 17) GATTGGTT 1 chr19:1790919-1790999 ( 42) GATTGGTT 1 chr10:120101790-12010187 ( 50) CATTGGCT 1 chr17:57232614-57232694 ( 13) CATTGGCT 1 chr17:45177678-45177758 ( 39) CATTGGCT 1 chr9:128003754-128003834 ( 51) CATTGGCT 1 chr13:20437856-20437936 ( 33) CATTGGCT 1 chr19:47551923-47552003 ( 37) CATTGGCT 1 chr19:33462889-33462969 ( 33) CATTGGCT 1 chr1:45140255-45140335 ( 54) CATTGGCT 1 chr19:45873893-45873973 ( 15) CATTGGCT 1 chr19:42773007-42773087 ( 21) CATTGGCT 1 chr6:122720577-122720657 ( 62) GATTGGCC 1 chrX:49047584-49047664 ( 70) CATTGGCT 1 chr2:88927190-88927270 ( 62) GATTGGCC 1 chr9:127905868-127905948 ( 10) CATTGGCT 1 chr15:98503711-98503791 ( 34) GATTGGCC 1 chr19:42580168-42580248 ( 41) GATTGGCC 1 chr6:80247179-80247259 ( 17) CATTGGCT 1 chr1:25757220-25757300 ( 55) GATTGGCC 1 chr15:63481586-63481666 ( 69) GATTGGCC 1 chr17:79196826-79196906 ( 9) GATTGGCC 1 chr8:11660019-11660099 ( 63) GATTGGCC 1 chr11:67275733-67275813 ( 51) GATTGGCC 1 chr14:23755405-23755485 ( 32) CATTGGCT 1 chr13:103451364-10345144 ( 8) GATTGGCC 1 chr10:99393256-99393336 ( 21) CATTGGCT 1 chr17:38210647-38210727 ( 30) TATTGGCT 1 chr17:47841577-47841657 ( 60) GATTGGTC 1 chr12:56367634-56367714 ( 30) TATTGGCT 1 chr22:21400088-21400168 ( 40) TATTGGCT 1 chr3:56591131-56591211 ( 13) GATTGGTC 1 chr1:33938048-33938128 ( 56) TATTGGCT 1 chr2:24270334-24270414 ( 43) TATTGGCT 1 chrX:49125725-49125805 ( 13) TATTGGCT 1 chr9:139743710-139743790 ( 11) GATTGGTC 1 chr19:18303767-18303847 ( 46) GATTGGTC 1 chr11:62521653-62521733 ( 35) GATTGGTC 1 chr16:57769274-57769354 ( 32) GATTGGTC 1 chr17:47866560-47866640 ( 37) GATTGGTC 1 chr19:1041092-1041172 ( 59) CATTGGTT 1 chr14:21458023-21458103 ( 2) TATTGGCT 1 chr2:64068015-64068095 ( 11) CATTGGCC 1 chr16:4852965-4853045 ( 21) CATTGGCC 1 chr19:58790206-58790286 ( 71) CATTGGCC 1 chr10:99205782-99205862 ( 6) CATTGGCC 1 chr17:80325874-80325954 ( 59) TATTGGTT 1 chr17:39943151-39943231 ( 1) CATTGGCC 1 chr19:14228626-14228706 ( 14) CATTGGCC 1 chr9:130829733-130829813 ( 58) CATTGGTC 1 chr1:202830764-202830844 ( 51) TATTGGCC 1 chr5:145583045-145583125 ( 9) CATTGGTC 1 chr17:56595357-56595437 ( 28) CATTGGTC 1 chr20:44509750-44509830 ( 41) CATTGGTC 1 chr12:56211570-56211650 ( 47) CATTGGTC 1 chr22:36784138-36784218 ( 42) TATTGGCC 1 chr19:50269800-50269880 ( 66) CATTGGTC 1 chr19:46087714-46087794 ( 41) TATTGGCC 1 chr20:40247072-40247152 ( 52) CATTGGTC 1 chr19:4472062-4472142 ( 27) TATTGGTC 1 chr11:46867819-46867899 ( 37) TATTGGTC 1 chr2:73460450-73460530 ( 51) TATTGGTC 1 chr14:68286406-68286486 ( 44) GATTGGAT 1 chr1:247171387-247171467 ( 21) GATTGGAC 1 chr1:6845209-6845289 ( 22) GATTGGAC 1 chr19:2945004-2945084 ( 13) GATTGGAC 1 chr16:1728178-1728258 ( 33) GATTGGCG 1 chr1:151227147-151227227 ( 28) GATTGGTG 1 chr3:126422986-126423066 ( 23) GATTGGTG 1 chr16:30621741-30621821 ( 21) CATTGGAC 1 chr7:8008269-8008349 ( 5) CATTGGAC 1 chr6:112194703-112194783 ( 58) CATTGGCG 1 chr19:12662365-12662445 ( 16) GATTGGGT 1 chr17:79212902-79212982 ( 40) GGTTGGCT 1 chr9:133588093-133588173 ( 19) GGTTGGCT 1 chr3:88108213-88108293 ( 59) GATTGGCA 1 chr2:232646022-232646102 ( 33) GATTGGCA 1 chr12:510662-510742 ( 51) CATTGGTG 1 chr15:43213055-43213135 ( 60) GGTTGGCT 1 chr9:139780759-139780839 ( 33) GGTTGGCT 1 chr17:74667896-74667976 ( 32) GATTGGCA 1 chr1:43312123-43312203 ( 22) TATTGGTG 1 chr2:65283370-65283450 ( 39) TATTGGTG 1 chr16:30645737-30645817 ( 45) GATTGGGC 1 chr7:43622565-43622645 ( 34) GGTTGGCC 1 chr12:53773562-53773642 ( 48) GGTTGGCC 1 chr19:4968805-4968885 ( 14) GGTTGGTC 1 chr4:48782428-48782508 ( 31) GGTTGGTC 1 chr17:46125562-46125642 ( 21) CATTGGGC 1 chr20:17662982-17663062 ( 69) CATTGGGC 1 chr22:41347671-41347751 ( 1) TGTTGGTT 1 chr16:50775826-50775906 ( 16) CATTGGAG 1 chr15:75744243-75744323 ( 10) TATTGGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.59116 E= 4.4e-077 -1340 11 73 -24 225 -1340 -186 -1340 -1340 -1340 -1340 234 -1340 -1340 -1340 234 -1340 -1340 173 -1340 -1340 -1340 173 -1340 -138 92 -302 63 -279 53 -186 117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 108 E= 4.4e-077 0.000000 0.333333 0.500000 0.166667 0.916667 0.000000 0.083333 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.074074 0.583333 0.037037 0.305556 0.027778 0.444444 0.083333 0.444444 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATTGGYY MEME-2 regular expression -------------------------------------------------------------------------------- [GC]ATTGG[CT][CT] -------------------------------------------------------------------------------- Time 9.20 secs. ******************************************************************************** ******************************************************************************** MOTIF SRGCCAAT MEME-3 width = 8 sites = 47 llr = 388 E-value = 6.9e-013 ******************************************************************************** -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 162::9a: pos.-specific C 42:aa::: probability G 338::::: matrix T 2::::1:a bits 2.4 ** 2.1 ** 1.9 *** 1.7 ***** Relative 1.4 ***** Entropy 1.2 ****** (11.9 bits) 0.9 ****** 0.7 ******* 0.5 ******* 0.2 ******* 0.0 -------- Multilevel CAGCCAAT consensus GGA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:560858-560938 41 1.25e-05 CCGCGCTGAG CAGCCAAT AGGGGTGCTA chr1:52195360-52195440 72 1.25e-05 CCGCCAGGGC CAGCCAAT C chr12:67662581-67662661 39 1.25e-05 CTAGTTCCCG CAGCCAAT CACATTCTGA chr1:23694873-23694953 15 1.25e-05 GCAGCTGCCT CAGCCAAT CAGCGAGCGA chr16:50059014-50059094 15 1.25e-05 GTGCAAGAGA CAGCCAAT AGAAAGCTGT chr19:36248868-36248948 56 1.25e-05 GCAGTCGTCC CAGCCAAT CCTGAAACAC chr16:67217573-67217653 44 1.25e-05 GCGTGACCTG CAGCCAAT AAGTGGTGGG chr17:79980919-79980999 12 1.25e-05 TCACGTCCCG CAGCCAAT GAACTTGGAA chr15:69113262-69113342 60 1.25e-05 CTCCGGGCAA CAGCCAAT GGCAGTGGCG chr19:9945869-9945949 69 3.27e-05 AGAGCGCGTC TAGCCAAT AGGC chr17:73452588-73452668 21 3.27e-05 GCACGCCGCG TAGCCAAT AAGAAGCCAG chr3:113415574-113415654 49 3.27e-05 GCTGCCGTGG TAGCCAAT AAGAAGACAG chr13:20532732-20532812 25 3.27e-05 ACGGCCGTCG GAGCCAAT GGGCGTGCCC chr12:53473220-53473300 44 3.27e-05 GCACCTGCAG GAGCCAAT CGGAAGGCGC chr1:6052620-6052700 30 4.07e-05 GACGACCCCT CAACCAAT GGTAATGTGA chr2:97523846-97523926 52 8.11e-05 CTTAGCTCGA GAACCAAT TGCAACGGTA chr11:75526136-75526216 71 8.11e-05 CTTGAGGGCT AAGCCAAT GA chr17:79212902-79212982 8 8.11e-05 GGTCCGC CGGCCAAT CCCTCACGGT chr9:80911922-80912002 33 8.11e-05 TCCTTCGCGC GAACCAAT TAGCGCAGGG chr7:8008269-8008349 71 8.11e-05 GGGAGCGCCT AAGCCAAT GG chr19:17420233-17420313 33 8.11e-05 TAGCTGGATG CGGCCAAT GGAAGCGTGC chr19:45394292-45394372 58 8.11e-05 CTGCGAGTGA GAACCAAT ACAAAAGGAC chr14:104181843-10418192 46 8.11e-05 ACTGACTAAC TAACCAAT CCAAAGTCTC chr19:54641275-54641355 71 8.11e-05 TCCCTGCCAG GAACCAAT AG chr8:42010324-42010404 61 1.13e-04 GGCCTCAACA GGGCCAAT CGGGGGACTC chr3:61237165-61237245 62 1.13e-04 CGCCTACGCC GGGCCAAT TGAAAGCCAT chr12:112563226-11256330 58 1.13e-04 GAGCCGCCCC TGGCCAAT GGGCGCGCTC chr2:73298515-73298595 8 1.13e-04 GCGCCAA GGGCCAAT AGGAAGCCAA chr19:50270046-50270126 38 1.13e-04 GCGGAACACT GGGCCAAT CGTAGCGTCG chr16:30382012-30382092 73 1.13e-04 CTGAACCTCC TGGCCAAT chr16:2955814-2955894 67 1.13e-04 GGCGAGCGAA GGGCCAAT GGGCAG chr11:17298173-17298253 2 1.33e-04 C CCGCCAAT CGGCGTCGTC chr19:41284021-41284101 54 1.33e-04 GCCCGCGAGT CCGCCAAT CCCGCCCTTC chr1:38397520-38397600 67 1.33e-04 ATACCTGCCT CCGCCAAT TGTCGC chr16:90143759-90143839 48 1.33e-04 CAAGGCGAGC CCGCCAAT CGGCAGTCAG chrX:48958206-48958286 36 1.50e-04 CAATCGTCAT CGACCAAT CAGAGCCCAC chr14:96001150-96001230 30 1.50e-04 CGGTTGCCGA CGACCAAT AGTAAGGCAG chr12:109535798-10953587 31 1.82e-04 GGGGCCCATG GCGCCAAT CCGCGCGCCG chr19:19174663-19174743 45 1.82e-04 TGCTTCATAC TCGCCAAT CACTGTCGCT chr7:100184105-100184185 72 2.15e-04 ACTGTCAAGA AGGCCAAT T chr7:23053767-23053847 42 2.40e-04 CACGCCAGTT CAGCCTAT CGCCGTCCTC chr19:41082676-41082756 60 2.40e-04 GCCCAATGAG CAGCCTAT GGAGGCGGGG chr15:90895375-90895455 33 2.40e-04 ACAGCTCTAT CAGCCTAT GGACAGAGAA chr19:46148898-46148978 53 2.74e-04 GCAGGGCCCT TCACCAAT AGGGATGCAG chr6:37225448-37225528 64 2.74e-04 CTTGCGCAGC TCACCAAT GGCAGCGGT chr9:130007474-130007554 55 2.94e-04 GACCGCTGGA GAGCCTAT GAGCACAGCG chr1:156308105-156308185 46 3.02e-04 GCACAAAAAC AGACCAAT TGACAGCCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:560858-560938 1.2e-05 40_[+3]_32 chr1:52195360-52195440 1.2e-05 71_[+3]_1 chr12:67662581-67662661 1.2e-05 38_[+3]_34 chr1:23694873-23694953 1.2e-05 14_[+3]_58 chr16:50059014-50059094 1.2e-05 14_[+3]_58 chr19:36248868-36248948 1.2e-05 55_[+3]_17 chr16:67217573-67217653 1.2e-05 43_[+3]_29 chr17:79980919-79980999 1.2e-05 11_[+3]_61 chr15:69113262-69113342 1.2e-05 59_[+3]_13 chr19:9945869-9945949 3.3e-05 68_[+3]_4 chr17:73452588-73452668 3.3e-05 20_[+3]_52 chr3:113415574-113415654 3.3e-05 48_[+3]_24 chr13:20532732-20532812 3.3e-05 24_[+3]_48 chr12:53473220-53473300 3.3e-05 43_[+3]_29 chr1:6052620-6052700 4.1e-05 29_[+3]_43 chr2:97523846-97523926 8.1e-05 51_[+3]_21 chr11:75526136-75526216 8.1e-05 70_[+3]_2 chr17:79212902-79212982 8.1e-05 7_[+3]_65 chr9:80911922-80912002 8.1e-05 32_[+3]_40 chr7:8008269-8008349 8.1e-05 70_[+3]_2 chr19:17420233-17420313 8.1e-05 32_[+3]_40 chr19:45394292-45394372 8.1e-05 57_[+3]_15 chr14:104181843-10418192 8.1e-05 45_[+3]_27 chr19:54641275-54641355 8.1e-05 70_[+3]_2 chr8:42010324-42010404 0.00011 60_[+3]_12 chr3:61237165-61237245 0.00011 61_[+3]_11 chr12:112563226-11256330 0.00011 57_[+3]_15 chr2:73298515-73298595 0.00011 7_[+3]_65 chr19:50270046-50270126 0.00011 37_[+3]_35 chr16:30382012-30382092 0.00011 72_[+3] chr16:2955814-2955894 0.00011 66_[+3]_6 chr11:17298173-17298253 0.00013 1_[+3]_71 chr19:41284021-41284101 0.00013 53_[+3]_19 chr1:38397520-38397600 0.00013 66_[+3]_6 chr16:90143759-90143839 0.00013 47_[+3]_25 chrX:48958206-48958286 0.00015 35_[+3]_37 chr14:96001150-96001230 0.00015 29_[+3]_43 chr12:109535798-10953587 0.00018 30_[+3]_42 chr19:19174663-19174743 0.00018 44_[+3]_28 chr7:100184105-100184185 0.00021 71_[+3]_1 chr7:23053767-23053847 0.00024 41_[+3]_31 chr19:41082676-41082756 0.00024 59_[+3]_13 chr15:90895375-90895455 0.00024 32_[+3]_40 chr19:46148898-46148978 0.00027 52_[+3]_20 chr6:37225448-37225528 0.00027 63_[+3]_9 chr9:130007474-130007554 0.00029 54_[+3]_18 chr1:156308105-156308185 0.0003 45_[+3]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SRGCCAAT width=8 seqs=47 chr11:560858-560938 ( 41) CAGCCAAT 1 chr1:52195360-52195440 ( 72) CAGCCAAT 1 chr12:67662581-67662661 ( 39) CAGCCAAT 1 chr1:23694873-23694953 ( 15) CAGCCAAT 1 chr16:50059014-50059094 ( 15) CAGCCAAT 1 chr19:36248868-36248948 ( 56) CAGCCAAT 1 chr16:67217573-67217653 ( 44) CAGCCAAT 1 chr17:79980919-79980999 ( 12) CAGCCAAT 1 chr15:69113262-69113342 ( 60) CAGCCAAT 1 chr19:9945869-9945949 ( 69) TAGCCAAT 1 chr17:73452588-73452668 ( 21) TAGCCAAT 1 chr3:113415574-113415654 ( 49) TAGCCAAT 1 chr13:20532732-20532812 ( 25) GAGCCAAT 1 chr12:53473220-53473300 ( 44) GAGCCAAT 1 chr1:6052620-6052700 ( 30) CAACCAAT 1 chr2:97523846-97523926 ( 52) GAACCAAT 1 chr11:75526136-75526216 ( 71) AAGCCAAT 1 chr17:79212902-79212982 ( 8) CGGCCAAT 1 chr9:80911922-80912002 ( 33) GAACCAAT 1 chr7:8008269-8008349 ( 71) AAGCCAAT 1 chr19:17420233-17420313 ( 33) CGGCCAAT 1 chr19:45394292-45394372 ( 58) GAACCAAT 1 chr14:104181843-10418192 ( 46) TAACCAAT 1 chr19:54641275-54641355 ( 71) GAACCAAT 1 chr8:42010324-42010404 ( 61) GGGCCAAT 1 chr3:61237165-61237245 ( 62) GGGCCAAT 1 chr12:112563226-11256330 ( 58) TGGCCAAT 1 chr2:73298515-73298595 ( 8) GGGCCAAT 1 chr19:50270046-50270126 ( 38) GGGCCAAT 1 chr16:30382012-30382092 ( 73) TGGCCAAT 1 chr16:2955814-2955894 ( 67) GGGCCAAT 1 chr11:17298173-17298253 ( 2) CCGCCAAT 1 chr19:41284021-41284101 ( 54) CCGCCAAT 1 chr1:38397520-38397600 ( 67) CCGCCAAT 1 chr16:90143759-90143839 ( 48) CCGCCAAT 1 chrX:48958206-48958286 ( 36) CGACCAAT 1 chr14:96001150-96001230 ( 30) CGACCAAT 1 chr12:109535798-10953587 ( 31) GCGCCAAT 1 chr19:19174663-19174743 ( 45) TCGCCAAT 1 chr7:100184105-100184185 ( 72) AGGCCAAT 1 chr7:23053767-23053847 ( 42) CAGCCTAT 1 chr19:41082676-41082756 ( 60) CAGCCTAT 1 chr15:90895375-90895455 ( 33) CAGCCTAT 1 chr19:46148898-46148978 ( 53) TCACCAAT 1 chr6:37225448-37225528 ( 64) TCACCAAT 1 chr9:130007474-130007554 ( 55) GAGCCTAT 1 chr1:156308105-156308185 ( 46) AGACCAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.4993 E= 6.9e-013 -118 53 -12 -4 152 -86 -12 -1220 28 -1220 134 -1220 -1220 170 -1220 -1220 -1220 170 -1220 -1220 225 -1220 -1220 -121 237 -1220 -1220 -1220 -1220 -1220 -1220 234 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 47 E= 6.9e-013 0.085106 0.446809 0.276596 0.191489 0.553191 0.170213 0.276596 0.000000 0.234043 0.000000 0.765957 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.914894 0.000000 0.000000 0.085106 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SRGCCAAT MEME-3 regular expression -------------------------------------------------------------------------------- [CG][AG][GA]CCAAT -------------------------------------------------------------------------------- Time 12.59 secs. ******************************************************************************** ******************************************************************************** MOTIF CTSATTGG MEME-4 width = 8 sites = 42 llr = 330 E-value = 9.8e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::9:1:: pos.-specific C 923:2::: probability G ::41::aa matrix T 182:89:: bits 2.4 2.1 1.9 * 1.7 * *** Relative 1.4 * ***** Entropy 1.2 ** ***** (11.3 bits) 0.9 ** ***** 0.7 ** ***** 0.5 ** ***** 0.2 ******** 0.0 -------- Multilevel CTGATTGG consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:30621741-30621821 50 1.25e-05 ATCGAGCGTT CTGATTGG GTGCTAGCAA chr2:88927190-88927270 17 1.25e-05 GTCTTTTTAC CTGATTGG TGCGCTCATC chr15:43213055-43213135 26 1.25e-05 GCTACAGGTG CTGATTGG AGAGTGCGTT chr19:2945004-2945084 42 1.25e-05 CTCCGCACCC CTGATTGG AGAATTCTCC chr19:10491339-10491419 31 2.53e-05 TGGCGGCACT CTCATTGG TCCTGGGGCT chr17:45177678-45177758 6 2.53e-05 TGGCG CTCATTGG CCCTTCAGGG chr11:59383423-59383503 41 2.53e-05 TTTGGGGAAG CTCATTGG TGCTTTCCTG chr17:79196826-79196906 48 2.53e-05 GTCCCGGGAG CTCATTGG GCCGCTCGGC chr19:36193346-36193426 72 2.53e-05 GCCCTGGCGT CTCATTGG C chr11:67275733-67275813 9 3.34e-05 CGAGCCTC CTTATTGG CCGAGACCTG chr19:50096734-50096814 48 5.76e-05 TCCGCCCCTC CTAATTGG CCGTGGCCCG chr11:46867819-46867899 68 6.28e-05 CCATCGGACT TTTATTGG TCCAT chrX:49047584-49047664 7 6.28e-05 CCTCCC TTTATTGG TTGCTCTGCT chr6:80247179-80247259 45 6.28e-05 GACGGCCCTT TTTATTGG CTTCAGTGGA chr1:247171387-247171467 48 1.02e-04 GCTAGCGCCG CTGACTGG ATGGGGCTCC chr2:64068015-64068095 42 1.02e-04 GCCTCGGCTC CTGACTGG CGGCTGCGCC chr1:24742165-24742245 54 1.02e-04 CTGCCAACTT CTGACTGG CAGGCAGTCT chr19:19174663-19174743 70 1.02e-04 GCTTCCAGCG CTGACTGG CCA chr19:8455127-8455207 69 1.14e-04 CCACTCGCCG CTGATAGG CCAT chr3:179280624-179280704 72 1.14e-04 TAGTGATTGG CTGATAGG A chr2:24270334-24270414 8 1.14e-04 TGGTCCT CTGATAGG ATAGGCACGC chr16:30645737-30645817 1 1.14e-04 . CTGATAGG ACGCTTCTGG chr19:4342866-4342946 21 1.54e-04 TGGACGTCTG CCCATTGG TCAAATCCGA chr17:57232614-57232694 42 1.54e-04 CCGGCTCCCG CCCATTGG AGACTGGGTA chr1:202830764-202830844 8 1.54e-04 CGCGACT CTCACTGG GCCAGGCCCC chr7:100825899-100825979 72 1.54e-04 CTCCAAACAG CTCACTGG G chr19:58790206-58790286 12 1.54e-04 GGTGGGGGCT CCCATTGG CCATCGGCCA chr6:160183386-160183466 56 1.54e-04 GCCTGCCTCT CCCATTGG TTGGCGTAGG chr19:18315092-18315172 7 1.54e-04 CGTTCT CTCACTGG CTTAAGCTCT chr17:80325874-80325954 13 1.67e-04 ccccagcttc ctcatagg ctgagtacta chr7:99746379-99746459 48 2.12e-04 TTCGCACTGG CTGGTTGG GTCTGACGAC chr5:145583045-145583125 39 2.12e-04 CCCCCTCTCT CTTACTGG TTCTCAGGCC chr16:4852965-4853045 58 2.12e-04 GCTCCTCCTC CCTATTGG CCCGCTTGGC chr11:31531161-31531241 54 2.12e-04 ACGTCTCAGT CCTATTGG TTACGAGAGC chr17:58755088-58755168 9 2.12e-04 CCTACTTG CTGGTTGG CGAAGCTGAC chr19:13906050-13906130 26 2.12e-04 GCTGTGCGCT CTGGTTGG GTAAACAAGA chr6:82957488-82957568 20 2.12e-04 AAGGCGGGCG CTGGTTGG CTGGGGCTCC chr14:21458023-21458103 30 2.40e-04 ACTCGCTCTT CTCGTTGG CTGAAACTGT chr12:56367634-56367714 70 2.53e-04 CTTGCTCGTA CTTGTTGG TGA chr11:62521653-62521733 2 2.58e-04 T TTAATTGG CTTAAGATTG chr9:127905868-127905948 48 2.83e-04 AATCTGTCAG TCGATTGG ACGCTCGGCC chr8:71314371-71314451 55 2.83e-04 CTCCCTGCCT TCGATTGG CTCACTGCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:30621741-30621821 1.3e-05 49_[+4]_23 chr2:88927190-88927270 1.3e-05 16_[+4]_56 chr15:43213055-43213135 1.3e-05 25_[+4]_47 chr19:2945004-2945084 1.3e-05 41_[+4]_31 chr19:10491339-10491419 2.5e-05 30_[+4]_42 chr17:45177678-45177758 2.5e-05 5_[+4]_67 chr11:59383423-59383503 2.5e-05 40_[+4]_32 chr17:79196826-79196906 2.5e-05 47_[+4]_25 chr19:36193346-36193426 2.5e-05 71_[+4]_1 chr11:67275733-67275813 3.3e-05 8_[+4]_64 chr19:50096734-50096814 5.8e-05 47_[+4]_25 chr11:46867819-46867899 6.3e-05 67_[+4]_5 chrX:49047584-49047664 6.3e-05 6_[+4]_66 chr6:80247179-80247259 6.3e-05 44_[+4]_28 chr1:247171387-247171467 0.0001 47_[+4]_25 chr2:64068015-64068095 0.0001 41_[+4]_31 chr1:24742165-24742245 0.0001 53_[+4]_19 chr19:19174663-19174743 0.0001 69_[+4]_3 chr19:8455127-8455207 0.00011 68_[+4]_4 chr3:179280624-179280704 0.00011 71_[+4]_1 chr2:24270334-24270414 0.00011 7_[+4]_65 chr16:30645737-30645817 0.00011 [+4]_72 chr19:4342866-4342946 0.00015 20_[+4]_52 chr17:57232614-57232694 0.00015 41_[+4]_31 chr1:202830764-202830844 0.00015 7_[+4]_65 chr7:100825899-100825979 0.00015 71_[+4]_1 chr19:58790206-58790286 0.00015 11_[+4]_61 chr6:160183386-160183466 0.00015 55_[+4]_17 chr19:18315092-18315172 0.00015 6_[+4]_66 chr17:80325874-80325954 0.00017 12_[+4]_60 chr7:99746379-99746459 0.00021 47_[+4]_25 chr5:145583045-145583125 0.00021 38_[+4]_34 chr16:4852965-4853045 0.00021 57_[+4]_15 chr11:31531161-31531241 0.00021 53_[+4]_19 chr17:58755088-58755168 0.00021 8_[+4]_64 chr19:13906050-13906130 0.00021 25_[+4]_47 chr6:82957488-82957568 0.00021 19_[+4]_53 chr14:21458023-21458103 0.00024 29_[+4]_43 chr12:56367634-56367714 0.00025 69_[+4]_3 chr11:62521653-62521733 0.00026 1_[+4]_71 chr9:127905868-127905948 0.00028 47_[+4]_25 chr8:71314371-71314451 0.00028 54_[+4]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTSATTGG width=8 seqs=42 chr16:30621741-30621821 ( 50) CTGATTGG 1 chr2:88927190-88927270 ( 17) CTGATTGG 1 chr15:43213055-43213135 ( 26) CTGATTGG 1 chr19:2945004-2945084 ( 42) CTGATTGG 1 chr19:10491339-10491419 ( 31) CTCATTGG 1 chr17:45177678-45177758 ( 6) CTCATTGG 1 chr11:59383423-59383503 ( 41) CTCATTGG 1 chr17:79196826-79196906 ( 48) CTCATTGG 1 chr19:36193346-36193426 ( 72) CTCATTGG 1 chr11:67275733-67275813 ( 9) CTTATTGG 1 chr19:50096734-50096814 ( 48) CTAATTGG 1 chr11:46867819-46867899 ( 68) TTTATTGG 1 chrX:49047584-49047664 ( 7) TTTATTGG 1 chr6:80247179-80247259 ( 45) TTTATTGG 1 chr1:247171387-247171467 ( 48) CTGACTGG 1 chr2:64068015-64068095 ( 42) CTGACTGG 1 chr1:24742165-24742245 ( 54) CTGACTGG 1 chr19:19174663-19174743 ( 70) CTGACTGG 1 chr19:8455127-8455207 ( 69) CTGATAGG 1 chr3:179280624-179280704 ( 72) CTGATAGG 1 chr2:24270334-24270414 ( 8) CTGATAGG 1 chr16:30645737-30645817 ( 1) CTGATAGG 1 chr19:4342866-4342946 ( 21) CCCATTGG 1 chr17:57232614-57232694 ( 42) CCCATTGG 1 chr1:202830764-202830844 ( 8) CTCACTGG 1 chr7:100825899-100825979 ( 72) CTCACTGG 1 chr19:58790206-58790286 ( 12) CCCATTGG 1 chr6:160183386-160183466 ( 56) CCCATTGG 1 chr19:18315092-18315172 ( 7) CTCACTGG 1 chr17:80325874-80325954 ( 13) CTCATAGG 1 chr7:99746379-99746459 ( 48) CTGGTTGG 1 chr5:145583045-145583125 ( 39) CTTACTGG 1 chr16:4852965-4853045 ( 58) CCTATTGG 1 chr11:31531161-31531241 ( 54) CCTATTGG 1 chr17:58755088-58755168 ( 9) CTGGTTGG 1 chr19:13906050-13906130 ( 26) CTGGTTGG 1 chr6:82957488-82957568 ( 20) CTGGTTGG 1 chr14:21458023-21458103 ( 30) CTCGTTGG 1 chr12:56367634-56367714 ( 70) CTTGTTGG 1 chr11:62521653-62521733 ( 2) TTAATTGG 1 chr9:127905868-127905948 ( 48) TCGATTGG 1 chr8:71314371-71314451 ( 55) TCGATTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.06546 E= 9.8e-001 -1204 147 -1204 -47 -1204 -69 -1204 204 -202 11 51 -5 215 -1204 -108 -1204 -1204 -69 -1204 204 -70 -1204 -1204 216 -1204 -1204 173 -1204 -1204 -1204 173 -1204 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 42 E= 9.8e-001 0.000000 0.857143 0.000000 0.142857 0.000000 0.190476 0.000000 0.809524 0.047619 0.333333 0.428571 0.190476 0.857143 0.000000 0.142857 0.000000 0.000000 0.190476 0.000000 0.809524 0.119048 0.000000 0.000000 0.880952 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTSATTGG MEME-4 regular expression -------------------------------------------------------------------------------- CT[GC]ATTGG -------------------------------------------------------------------------------- Time 15.91 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCGCCCC MEME-5 width = 8 sites = 46 llr = 354 E-value = 8.8e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::2:::: pos.-specific C aa8:aa8a probability G :::6:::: matrix T ::22::2: bits 2.4 2.1 1.9 1.7 * ** * Relative 1.4 ** ** * Entropy 1.2 *** **** (11.1 bits) 0.9 *** **** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCCGCCCC consensus T T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:19496382-19496462 32 7.94e-05 CCTCCTCGGA cccgcccc ggccggcggc chr1:156308105-156308185 67 7.94e-05 CAGCCTTAGT CCCGCCCC CTACGC chr1:202830764-202830844 34 7.94e-05 CCCACCGAGG CCCGCCCC TCTCTCCGCT chr19:36505186-36505266 52 7.94e-05 TCAGTATTCG CCCGCCCC CTTCATGCTC chr11:75526136-75526216 53 7.94e-05 GCCGTTGGGT CCCGCCCC CTTGAGGGCT chr1:160068447-160068527 70 7.94e-05 cccgtctagg cccgcccc gcc chr1:45140255-45140335 29 7.94e-05 GCAACCATGC CCCGCCCC TATTACTGAC chr2:73298515-73298595 40 7.94e-05 GGAGTCCGCG CCCGCCCC GTTGACCAAT chr19:42773210-42773290 26 7.94e-05 GGACTTTGGC CCCGCCCC CTAGCGCTGC chr19:41284021-41284101 34 7.94e-05 CGCCTCTTGT CCCGCCCC CTGCCCGCGA chr19:54663620-54663700 62 7.94e-05 CATAAGTTGG CCCGCCCC TGATGCTACC chr17:17875887-17875967 43 7.94e-05 CCTCCCCTGG CCCGCCCC CAAAGGGGAA chr14:75348517-75348597 71 7.94e-05 GGTACTGCGG CCCGCCCC AC chr4:2845473-2845553 8 7.94e-05 CAGGGGA CCCGCCCC TCATGGGTCC chr1:38397520-38397600 4 7.94e-05 GAG CCCGCCCC CTGTGGCCGG chr4:48782428-48782508 15 7.94e-05 CTACCTTCTC CCCGCCCC TTTTCCCGGG chr2:17699749-17699829 22 7.94e-05 ACGCCCCTGA CCCGCCCC TCAAGACCTG chr5:31532295-31532375 59 1.31e-04 AGCCCGCGCC CCCTCCCC CTACGTCCTC chr21:44394212-44394292 61 1.31e-04 GTACAGCCCT CCCTCCCC GCCTGCTCGA chr7:100825899-100825979 9 1.31e-04 GTTTCGGC CCCTCCCC TTAAGTCCAA chr19:50096734-50096814 2 1.31e-04 C CCCTCCCC CCGAGGCAGC chr19:50270046-50270126 2 1.31e-04 C CCCTCCCC AGCTCCCAAA chr11:62521653-62521733 20 1.31e-04 CTTAAGATTG CCCTCCCC TGTCACGGAT chr15:89631481-89631561 14 1.82e-04 CCCTAAGAAT CCCGCCTC CACTCTGAGG chr9:35072728-35072808 44 1.82e-04 CGGCCTGGCT CCCGCCTC AGTGATGCGA chr1:247171387-247171467 70 2.33e-04 GGCTCCAGGC CCCACCCC CTC chr15:75744243-75744323 32 2.33e-04 ACTGCTGAAG CCCACCCC CGAGCCCCAA chr6:122720577-122720657 1 2.33e-04 . CCCACCCC CTTCATGTCA chr19:1790919-1790999 23 2.33e-04 agccacatgc cccacccc ctggccatgg chr16:19566858-19566938 30 2.84e-04 CGGAGCGTCG CCTGCCCC TCACAAGCAT chr19:12662365-12662445 36 2.84e-04 TGATTCAAGT CCTGCCCC CTTGGTACTG chr1:153940252-153940332 10 2.84e-04 GCTCGATGT CCTGCCCC TCCGAAACCT chr19:55964503-55964583 40 2.84e-04 AAGGCAGCAC CCTGCCCC CCCCACAAGG chr19:4153508-4153588 7 2.84e-04 CTCCTG CCTGCCCC AGTGTCACTG chr11:67275733-67275813 23 2.84e-04 TTGGCCGAGA CCTGCCCC AGCAGGTCGC chr19:46148898-46148978 5 3.17e-04 ACCC CCCTCCTC GCCCGTTCAG chr19:42773007-42773087 4 3.17e-04 AGC CCCTCCTC CTTTCATTTC chr17:47866560-47866640 25 3.17e-04 AGAGAACGAT CCCTCCTC TCCTGATTGG chr19:18315092-18315172 64 3.17e-04 ATTGTCTACG CCCTCCTC TTGTCCAAT chr13:20532732-20532812 59 3.50e-04 CTCCGGCCAG CCTTCCCC GTCAGCCAAT chr15:83478274-83478354 32 3.82e-04 TCTTGTAAGC CCCACCTC CGGCAGCCAG chr14:96001150-96001230 71 3.82e-04 CGGCATAAGG CCCACCTC CT chr15:43213055-43213135 5 3.82e-04 CACG CCCACCTC TCCGCTACAG chr6:160183386-160183466 47 4.15e-04 CATCGCGTGG CCTGCCTC TCCCATTGGT chr9:128003754-128003834 31 5.19e-04 ACGTCACTGC TCCGCCCC CCCCAGCTGA chr16:22201979-22202059 22 5.19e-04 ACGCTCCTGC TCCGCCCC CTGAATCCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:19496382-19496462 7.9e-05 31_[+5]_41 chr1:156308105-156308185 7.9e-05 66_[+5]_6 chr1:202830764-202830844 7.9e-05 33_[+5]_39 chr19:36505186-36505266 7.9e-05 51_[+5]_21 chr11:75526136-75526216 7.9e-05 52_[+5]_20 chr1:160068447-160068527 7.9e-05 69_[+5]_3 chr1:45140255-45140335 7.9e-05 28_[+5]_44 chr2:73298515-73298595 7.9e-05 39_[+5]_33 chr19:42773210-42773290 7.9e-05 25_[+5]_47 chr19:41284021-41284101 7.9e-05 33_[+5]_39 chr19:54663620-54663700 7.9e-05 61_[+5]_11 chr17:17875887-17875967 7.9e-05 42_[+5]_30 chr14:75348517-75348597 7.9e-05 70_[+5]_2 chr4:2845473-2845553 7.9e-05 7_[+5]_65 chr1:38397520-38397600 7.9e-05 3_[+5]_69 chr4:48782428-48782508 7.9e-05 14_[+5]_58 chr2:17699749-17699829 7.9e-05 21_[+5]_51 chr5:31532295-31532375 0.00013 58_[+5]_14 chr21:44394212-44394292 0.00013 60_[+5]_12 chr7:100825899-100825979 0.00013 8_[+5]_64 chr19:50096734-50096814 0.00013 1_[+5]_71 chr19:50270046-50270126 0.00013 1_[+5]_71 chr11:62521653-62521733 0.00013 19_[+5]_53 chr15:89631481-89631561 0.00018 13_[+5]_59 chr9:35072728-35072808 0.00018 43_[+5]_29 chr1:247171387-247171467 0.00023 69_[+5]_3 chr15:75744243-75744323 0.00023 31_[+5]_41 chr6:122720577-122720657 0.00023 [+5]_72 chr19:1790919-1790999 0.00023 22_[+5]_50 chr16:19566858-19566938 0.00028 29_[+5]_43 chr19:12662365-12662445 0.00028 35_[+5]_37 chr1:153940252-153940332 0.00028 9_[+5]_63 chr19:55964503-55964583 0.00028 39_[+5]_33 chr19:4153508-4153588 0.00028 6_[+5]_66 chr11:67275733-67275813 0.00028 22_[+5]_50 chr19:46148898-46148978 0.00032 4_[+5]_68 chr19:42773007-42773087 0.00032 3_[+5]_69 chr17:47866560-47866640 0.00032 24_[+5]_48 chr19:18315092-18315172 0.00032 63_[+5]_9 chr13:20532732-20532812 0.00035 58_[+5]_14 chr15:83478274-83478354 0.00038 31_[+5]_41 chr14:96001150-96001230 0.00038 70_[+5]_2 chr15:43213055-43213135 0.00038 4_[+5]_68 chr6:160183386-160183466 0.00041 46_[+5]_26 chr9:128003754-128003834 0.00052 30_[+5]_42 chr16:22201979-22202059 0.00052 21_[+5]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCGCCCC width=8 seqs=46 chr19:19496382-19496462 ( 32) CCCGCCCC 1 chr1:156308105-156308185 ( 67) CCCGCCCC 1 chr1:202830764-202830844 ( 34) CCCGCCCC 1 chr19:36505186-36505266 ( 52) CCCGCCCC 1 chr11:75526136-75526216 ( 53) CCCGCCCC 1 chr1:160068447-160068527 ( 70) CCCGCCCC 1 chr1:45140255-45140335 ( 29) CCCGCCCC 1 chr2:73298515-73298595 ( 40) CCCGCCCC 1 chr19:42773210-42773290 ( 26) CCCGCCCC 1 chr19:41284021-41284101 ( 34) CCCGCCCC 1 chr19:54663620-54663700 ( 62) CCCGCCCC 1 chr17:17875887-17875967 ( 43) CCCGCCCC 1 chr14:75348517-75348597 ( 71) CCCGCCCC 1 chr4:2845473-2845553 ( 8) CCCGCCCC 1 chr1:38397520-38397600 ( 4) CCCGCCCC 1 chr4:48782428-48782508 ( 15) CCCGCCCC 1 chr2:17699749-17699829 ( 22) CCCGCCCC 1 chr5:31532295-31532375 ( 59) CCCTCCCC 1 chr21:44394212-44394292 ( 61) CCCTCCCC 1 chr7:100825899-100825979 ( 9) CCCTCCCC 1 chr19:50096734-50096814 ( 2) CCCTCCCC 1 chr19:50270046-50270126 ( 2) CCCTCCCC 1 chr11:62521653-62521733 ( 20) CCCTCCCC 1 chr15:89631481-89631561 ( 14) CCCGCCTC 1 chr9:35072728-35072808 ( 44) CCCGCCTC 1 chr1:247171387-247171467 ( 70) CCCACCCC 1 chr15:75744243-75744323 ( 32) CCCACCCC 1 chr6:122720577-122720657 ( 1) CCCACCCC 1 chr19:1790919-1790999 ( 23) CCCACCCC 1 chr16:19566858-19566938 ( 30) CCTGCCCC 1 chr19:12662365-12662445 ( 36) CCTGCCCC 1 chr1:153940252-153940332 ( 10) CCTGCCCC 1 chr19:55964503-55964583 ( 40) CCTGCCCC 1 chr19:4153508-4153588 ( 7) CCTGCCCC 1 chr11:67275733-67275813 ( 23) CCTGCCCC 1 chr19:46148898-46148978 ( 5) CCCTCCTC 1 chr19:42773007-42773087 ( 4) CCCTCCTC 1 chr17:47866560-47866640 ( 25) CCCTCCTC 1 chr19:18315092-18315172 ( 64) CCCTCCTC 1 chr13:20532732-20532812 ( 59) CCTTCCCC 1 chr15:83478274-83478354 ( 32) CCCACCTC 1 chr14:96001150-96001230 ( 71) CCCACCTC 1 chr15:43213055-43213135 ( 5) CCCACCTC 1 chr6:160183386-160183466 ( 47) CCTGCCTC 1 chr9:128003754-128003834 ( 31) TCCGCCCC 1 chr16:22201979-22202059 ( 22) TCCGCCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.03184 E= 8.8e+000 -1217 163 -1217 -218 -1217 170 -1217 -1217 -1217 142 -1217 -18 -34 -1217 101 28 -1217 170 -1217 -1217 -1217 170 -1217 -1217 -1217 134 -1217 14 -1217 170 -1217 -1217 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 46 E= 8.8e+000 0.000000 0.956522 0.000000 0.043478 0.000000 1.000000 0.000000 0.000000 0.000000 0.826087 0.000000 0.173913 0.152174 0.000000 0.608696 0.239130 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.782609 0.000000 0.217391 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGCCCC MEME-5 regular expression -------------------------------------------------------------------------------- CCC[GT]CC[CT]C -------------------------------------------------------------------------------- Time 19.09 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:1123184-1123264 6.19e-01 80 chr7:6543360-6543440 7.13e-01 80 chr2:17699749-17699829 6.69e-02 21_[+5(7.94e-05)]_51 chr10:99393256-99393336 6.25e-04 20_[+2(5.29e-05)]_52 chr3:126422986-126423066 3.76e-05 43_[+3(8.11e-05)]_29 chr6:82957488-82957568 2.71e-03 52_[+2(1.25e-05)]_20 chr14:21458023-21458103 2.59e-02 1_[+2(8.17e-05)]_71 chr8:145159245-145159325 3.08e-01 80 chr19:13906050-13906130 1.02e-01 80 chr13:103451364-10345144 6.29e-02 7_[+2(5.29e-05)]_65 chr14:23755405-23755485 3.60e-02 31_[+2(5.29e-05)]_24_[+2(8.17e-05)]_\ 9 chr11:67275733-67275813 7.07e-05 8_[+4(3.34e-05)]_34_[+2(5.29e-05)]_\ 22 chr19:36193346-36193426 1.92e-05 15_[+1(1.25e-05)]_48_[+4(2.53e-05)]_\ 1 chr1:151254581-151254661 5.99e-02 2_[+1(2.48e-05)]_70 chr19:18315092-18315172 8.90e-07 43_[+1(1.25e-05)]_29 chr19:2945004-2945084 9.65e-04 10_[+4(1.25e-05)]_23_[+4(1.25e-05)]_\ 31 chr19:54641275-54641355 1.18e-02 70_[+3(8.11e-05)]_2 chr1:167691120-167691200 6.11e-03 53_[+1(2.48e-05)]_19 chr20:40247072-40247152 2.22e-03 80 chr4:48782428-48782508 7.96e-03 14_[+5(7.94e-05)]_58 chr2:73460450-73460530 1.65e-03 80 chr12:53473220-53473300 5.98e-04 6_[+1(1.25e-05)]_29_[+3(3.27e-05)]_\ 29 chr19:14228626-14228706 2.01e-03 80 chr17:4870674-4870754 2.65e-03 46_[+1(1.25e-05)]_26 chr19:4328482-4328562 3.17e-02 80 chr5:32313293-32313373 9.80e-03 48_[+3(4.07e-05)]_24 chr14:104181843-10418192 2.30e-03 6_[+1(1.25e-05)]_31_[+3(8.11e-05)]_\ 27 chr15:69113262-69113342 4.60e-03 28_[+3(3.27e-05)]_23_[+3(1.25e-05)]_\ 13 chr8:11660019-11660099 2.77e-06 16_[+1(2.48e-05)]_36_[+4(1.25e-05)]_\ 12 chr17:79196826-79196906 2.48e-03 8_[+2(5.29e-05)]_31_[+4(2.53e-05)]_\ 25 chr8:71314371-71314451 1.15e-03 15_[+2(1.25e-05)]_33_[+2(1.25e-05)]_\ 16 chr5:172484166-172484246 8.68e-03 51_[+1(6.35e-05)]_21 chr4:52709112-52709192 1.09e-03 80 chr17:74667896-74667976 1.79e-02 80 chr16:90143759-90143839 5.93e-04 17_[+3(1.25e-05)]_25_[+1(4.43e-05)]_\ 22 chr19:1041092-1041172 6.24e-08 19_[+3(1.25e-05)]_31_[+2(8.17e-05)]_\ 14 chr20:17662982-17663062 1.16e-02 80 chr14:68286406-68286486 9.17e-05 41_[+4(1.25e-05)]_31 chr17:47866560-47866640 5.17e-05 34_[+4(1.25e-05)]_38 chr16:57769274-57769354 9.06e-05 29_[+4(1.25e-05)]_43 chr19:50372922-50373002 1.79e-02 39_[+1(4.43e-05)]_33 chr19:45394292-45394372 5.09e-03 9_[+3(3.27e-05)]_40_[+3(8.11e-05)]_\ 15 chr17:39943151-39943231 1.41e-02 80 chr15:90895375-90895455 3.15e-01 80 chr9:130477970-130478050 2.06e-02 80 chr17:79980919-79980999 7.10e-04 11_[+3(1.25e-05)]_43_[+3(1.25e-05)]_\ 10 chr19:19174663-19174743 6.98e-07 1_[+1(1.25e-05)]_1_[+2(1.25e-05)]_\ 29_[+1(9.20e-05)]_25 chr1:38397520-38397600 1.43e-03 3_[+5(7.94e-05)]_69 chr16:22385993-22386073 1.07e-01 80 chr16:22201979-22202059 3.09e-01 80 chr22:35696156-35696236 8.83e-02 80 chr15:63481586-63481666 7.99e-04 68_[+2(5.29e-05)]_4 chr6:160183386-160183466 2.68e-04 15_[+2(1.25e-05)]_34_[+2(8.17e-05)]_\ 15 chr1:25757220-25757300 1.21e-01 54_[+2(5.29e-05)]_18 chr16:67217573-67217653 2.26e-03 2_[+3(3.27e-05)]_33_[+3(1.25e-05)]_\ 29 chr6:112194703-112194783 3.85e-02 80 chr19:36248868-36248948 5.88e-04 19_[+1(7.93e-05)]_28_[+3(1.25e-05)]_\ 17 chr11:63953475-63953555 8.93e-03 42_[+1(2.48e-05)]_30 chr6:80247179-80247259 3.95e-03 16_[+2(5.29e-05)]_20_[+4(6.28e-05)]_\ 28 chr19:42580168-42580248 3.18e-03 40_[+2(5.29e-05)]_32 chr19:8408174-8408254 1.34e-01 80 chr3:149530917-149530997 2.52e-03 51_[+1(2.48e-05)]_21 chr9:139780759-139780839 4.92e-02 80 chr4:2845473-2845553 1.06e-04 7_[+5(7.94e-05)]_65 chr19:4153508-4153588 8.24e-05 54_[+1(1.25e-05)]_18 chr2:65283370-65283450 1.69e-01 80 chr13:20532732-20532812 5.90e-05 24_[+3(3.27e-05)]_36_[+3(1.25e-05)]_\ 4 chr6:32146014-32146094 2.28e-03 38_[+3(1.25e-05)]_34 chr15:43213055-43213135 4.54e-04 25_[+4(1.25e-05)]_47 chr19:17420233-17420313 1.67e-03 2_[+3(4.07e-05)]_22_[+3(8.11e-05)]_\ 40 chr15:98503711-98503791 1.31e-03 33_[+2(5.29e-05)]_39 chr19:41082676-41082756 6.63e-03 51_[+1(2.48e-05)]_21 chr17:80325874-80325954 1.03e-03 80 chr21:47604586-47604666 3.29e-01 80 chr19:13211016-13211096 6.86e-01 80 chr7:23053767-23053847 9.41e-02 80 chr19:1790919-1790999 8.08e-06 41_[+2(2.05e-05)]_31 chr19:46087714-46087794 8.98e-03 80 chr16:50059014-50059094 2.87e-04 14_[+3(1.25e-05)]_36_[+1(2.48e-05)]_\ 14 chr10:99205782-99205862 1.49e-03 3_[+4(2.53e-05)]_69 chr7:43909097-43909177 6.42e-01 80 chr6:159527911-159527991 8.92e-07 14_[+4(1.25e-05)]_25_[+3(8.11e-05)]_\ 25 chr14:75348517-75348597 4.22e-02 70_[+5(7.94e-05)]_2 chr19:58790206-58790286 1.88e-02 80 chr9:127905868-127905948 6.22e-03 9_[+2(5.29e-05)]_63 chr16:50775826-50775906 5.14e-03 44_[+1(9.20e-05)]_28 chr17:17875887-17875967 1.01e-01 42_[+5(7.94e-05)]_30 chr1:36851656-36851736 3.44e-02 23_[+2(2.05e-05)]_49 chr19:46498604-46498684 2.31e-03 70_[+1(1.25e-05)]_2 chr19:6424991-6425071 2.81e-01 80 chr8:6565812-6565892 1.21e-03 40_[+1(1.25e-05)]_32 chr16:2955814-2955894 3.61e-03 8_[+1(6.35e-05)]_16_[+1(6.35e-05)]_\ 10_[+1(6.35e-05)]_11_[+1(6.35e-05)]_3 chr19:54663620-54663700 2.85e-04 43_[+3(8.11e-05)]_10_[+5(7.94e-05)]_\ 11 chr11:59383423-59383503 6.25e-07 1_[+2(2.05e-05)]_10_[+1(1.25e-05)]_\ 13_[+4(2.53e-05)]_32 chr1:24742165-24742245 6.31e-03 80 chr1:153895525-153895605 7.12e-01 80 chr17:27139522-27139602 1.06e-03 15_[+3(1.25e-05)]_57 chr2:88927190-88927270 3.06e-03 16_[+4(1.25e-05)]_37_[+2(5.29e-05)]_\ 11 chrX:153042222-153042302 1.00e+00 80 chr9:35072728-35072808 3.98e-05 10_[+3(1.25e-05)]_62 chr17:38574241-38574321 1.68e-03 62_[+1(1.25e-05)]_10 chr15:85174568-85174648 4.92e-01 80 chr19:50269800-50269880 2.58e-05 63_[+4(4.96e-05)]_9 chrX:49047584-49047664 7.24e-04 6_[+4(6.28e-05)]_55_[+2(5.29e-05)]_\ 3 chr19:7894863-7894943 1.69e-01 80 chr11:68228058-68228138 2.01e-03 54_[+1(2.48e-05)]_18 chr3:113415574-113415654 1.34e-03 19_[+1(1.25e-05)]_21_[+3(3.27e-05)]_\ 24 chr19:50321417-50321497 9.35e-01 80 chr6:122720577-122720657 7.03e-06 22_[+3(1.25e-05)]_31_[+2(5.29e-05)]_\ 11 chr15:75744243-75744323 4.18e-04 80 chr12:510662-510742 4.92e-03 80 chr16:1728178-1728258 1.78e-03 49_[+1(6.35e-05)]_23 chr2:232646022-232646102 6.82e-04 7_[+3(8.11e-05)]_65 chr19:42773007-42773087 2.67e-04 18_[+4(4.96e-05)]_54 chr11:124981539-12498161 1.65e-02 80 chr11:62521653-62521733 2.59e-04 34_[+2(8.17e-05)]_38 chr19:55964503-55964583 4.28e-03 21_[+1(6.35e-05)]_51 chr17:58755088-58755168 4.02e-03 66_[+2(1.25e-05)]_6 chr16:30382012-30382092 1.71e-02 40_[+3(8.11e-05)]_32 chr19:2841345-2841425 3.42e-03 34_[+1(1.25e-05)]_24_[+1(1.25e-05)]_\ 6 chr17:73452588-73452668 2.33e-03 20_[+3(3.27e-05)]_35_[+1(4.43e-05)]_\ 9 chr14:78083212-78083292 1.71e-02 6_[+1(9.20e-05)]_66 chr7:8008269-8008349 3.30e-04 36_[+3(8.11e-05)]_26_[+3(8.11e-05)]_\ 2 chr2:106468102-106468182 7.75e-06 39_[+2(1.25e-05)]_33 chr19:18303767-18303847 7.29e-05 7_[+1(4.43e-05)]_30_[+2(8.17e-05)]_\ 27 chr3:88108213-88108293 3.59e-03 80 chr9:37465734-37465814 4.42e-03 34_[+3(4.07e-05)]_38 chr19:4968805-4968885 6.93e-04 50_[+1(2.48e-05)]_22 chr16:30645737-30645817 2.11e-02 80 chr1:151227147-151227227 1.56e-04 80 chr12:95611441-95611521 8.38e-03 28_[+1(7.93e-05)]_44 chr11:31531161-31531241 2.01e-03 23_[+2(2.05e-05)]_49 chr19:50270046-50270126 3.84e-05 71_[+1(2.48e-05)]_1 chr20:32308124-32308204 1.46e-03 33_[+1(1.25e-05)]_39 chr19:42901169-42901249 1.24e-02 80 chr17:76237679-76237759 6.82e-05 25_[+4(1.25e-05)]_47 chr16:4852965-4853045 1.67e-04 18_[+4(2.53e-05)]_54 chr17:26368575-26368655 1.42e-01 80 chrX:46988604-46988684 6.93e-01 80 chr1:23694873-23694953 7.18e-04 14_[+3(1.25e-05)]_28_[+1(1.25e-05)]_\ 22 chr19:41284021-41284101 1.55e-03 33_[+5(7.94e-05)]_39 chr19:9945869-9945949 7.90e-04 3_[+3(8.11e-05)]_17_[+1(6.35e-05)]_\ 32_[+3(3.27e-05)]_4 chr9:139743710-139743790 3.85e-02 10_[+2(8.17e-05)]_62 chr9:129987381-129987461 9.94e-01 80 chr17:46125562-46125642 2.52e-04 39_[+1(1.25e-05)]_33 chr12:106696392-10669647 3.26e-01 80 chrX:49125725-49125805 5.14e-02 12_[+2(8.17e-05)]_60 chr6:37225448-37225528 1.02e-03 80 chr14:21737659-21737739 5.57e-03 56_[+1(9.20e-05)]_16 chr2:24270334-24270414 1.05e-02 42_[+2(8.17e-05)]_30 chr15:64673725-64673805 9.07e-03 16_[+3(8.11e-05)]_56 chr19:19249303-19249383 1.81e-03 43_[+1(1.25e-05)]_29 chr19:45873893-45873973 1.66e-05 14_[+2(5.29e-05)]_26_[+3(3.27e-05)]_\ 24 chr17:61627674-61627754 2.70e-02 37_[+3(8.11e-05)]_35 chr1:150601683-150601763 7.81e-01 80 chr1:33938048-33938128 2.09e-02 55_[+2(8.17e-05)]_17 chr7:100184105-100184185 4.90e-02 80 chr19:42773210-42773290 1.30e-04 25_[+5(7.94e-05)]_47 chr22:36784138-36784218 2.56e-02 80 chr2:73298515-73298595 4.82e-05 39_[+5(7.94e-05)]_5_[+1(6.35e-05)]_\ 20 chr1:45140255-45140335 1.21e-04 28_[+5(7.94e-05)]_17_[+2(5.29e-05)]_\ 19 chr11:125933046-12593312 8.75e-01 80 chr7:99724809-99724889 7.76e-01 80 chr19:33462889-33462969 4.26e-05 32_[+2(5.29e-05)]_15_[+1(1.25e-05)]_\ 17 chr7:2595254-2595334 8.32e-01 80 chr16:74729869-74729949 1.15e-02 55_[+1(6.35e-05)]_17 chr19:47551923-47552003 3.10e-04 36_[+2(5.29e-05)]_36 chr1:160068447-160068527 1.63e-01 31_[+5(7.94e-05)]_30_[+5(7.94e-05)]_\ 3 chr3:179280624-179280704 1.34e-03 33_[+4(1.25e-05)]_24_[+2(1.25e-05)]_\ 7 chr9:80911922-80912002 7.76e-03 5_[+1(6.35e-05)]_19_[+3(8.11e-05)]_\ 26_[+1(6.35e-05)]_6 chr12:56211570-56211650 2.95e-04 80 chr15:89631481-89631561 3.70e-02 80 chr13:20437856-20437936 4.57e-03 32_[+2(5.29e-05)]_40 chr19:50096734-50096814 9.98e-06 18_[+4(1.25e-05)]_21_[+4(5.76e-05)]_\ 25 chr22:41347671-41347751 1.04e-03 27_[+1(9.20e-05)]_45 chr16:30621741-30621821 6.19e-06 18_[+4(4.96e-05)]_23_[+4(1.25e-05)]_\ 23 chr1:6052620-6052700 2.92e-04 29_[+3(4.07e-05)]_26_[+1(1.25e-05)]_\ 9 chr15:86338171-86338251 1.76e-04 22_[+3(1.25e-05)]_50 chr9:130007474-130007554 2.10e-01 80 chr3:56591131-56591211 1.02e-05 10_[+4(1.25e-05)]_62 chr7:100825899-100825979 1.13e-03 80 chr12:112563226-11256330 1.60e-03 29_[+1(6.35e-05)]_23_[+1(6.35e-05)]_\ 12 chr21:44394212-44394292 3.84e-01 80 chr14:23790537-23790617 3.50e-02 80 chr7:150725417-150725497 1.87e-02 29_[+1(9.20e-05)]_30_[+1(9.20e-05)]_\ 5 chr14:96001150-96001230 3.99e-03 80 chr11:46867819-46867899 1.00e-03 34_[+4(6.28e-05)]_25_[+4(6.28e-05)]_\ 5 chr9:128003754-128003834 2.91e-04 48_[+4(4.96e-05)]_24 chr19:48281738-48281818 3.33e-01 80 chr19:14117213-14117293 5.90e-01 80 chr20:44509750-44509830 5.98e-02 80 chr12:109535798-10953587 7.73e-03 2_[+1(6.35e-05)]_70 chr17:45177678-45177758 1.52e-03 5_[+4(2.53e-05)]_25_[+2(5.29e-05)]_\ 34 chr12:53773562-53773642 5.61e-03 80 chr4:104119610-104119690 3.08e-01 80 chr19:10491339-10491419 1.26e-03 30_[+4(2.53e-05)]_28_[+2(1.25e-05)]_\ 6 chr17:56595357-56595437 4.37e-07 25_[+4(2.53e-05)]_29_[+3(3.27e-05)]_\ 10 chr22:21400088-21400168 1.40e-01 39_[+2(8.17e-05)]_33 chr12:56367634-56367714 1.08e-02 29_[+2(8.17e-05)]_43 chr17:47841577-47841657 9.14e-06 21_[+3(1.25e-05)]_30_[+2(8.17e-05)]_\ 13 chr19:4472062-4472142 3.62e-03 24_[+4(3.34e-05)]_48 chr15:83478274-83478354 6.63e-05 46_[+3(1.25e-05)]_26 chr3:61237165-61237245 2.08e-02 80 chr5:145583045-145583125 5.69e-04 6_[+4(4.96e-05)]_66 chr19:33166124-33166204 2.40e-02 11_[+1(2.48e-05)]_61 chr9:133588093-133588173 1.13e-04 55_[+1(6.35e-05)]_17 chr17:79212902-79212982 1.36e-03 7_[+3(8.11e-05)]_65 chr5:137673658-137673738 2.08e-01 80 chr11:75526136-75526216 1.65e-04 52_[+5(7.94e-05)]_10_[+3(8.11e-05)]_\ 2 chr19:36505186-36505266 2.72e-04 24_[+1(4.43e-05)]_19_[+5(7.94e-05)]_\ 21 chr2:97523846-97523926 3.71e-03 23_[+1(7.93e-05)]_20_[+3(8.11e-05)]_\ 21 chr19:46148898-46148978 9.50e-05 24_[+1(2.48e-05)]_48 chr12:67662581-67662661 6.20e-04 13_[+1(2.48e-05)]_17_[+3(1.25e-05)]_\ 34 chr5:31532295-31532375 1.67e-03 80 chrX:47050091-47050171 6.27e-01 80 chr1:6845209-6845289 3.38e-04 19_[+4(1.25e-05)]_53 chr2:64068015-64068095 6.13e-04 8_[+4(2.53e-05)]_64 chr3:195163897-195163977 7.16e-04 26_[+1(2.48e-05)]_46 chr1:202830764-202830844 6.00e-04 33_[+5(7.94e-05)]_39 chr19:10828433-10828513 8.81e-03 14_[+1(7.93e-05)]_14_[+1(6.35e-05)]_\ 36 chr7:99746379-99746459 2.29e-04 6_[+1(7.93e-05)]_66 chr1:52195360-52195440 4.19e-03 71_[+3(1.25e-05)]_1 chr1:153940252-153940332 7.18e-03 40_[+1(1.25e-05)]_32 chr6:31126217-31126297 5.34e-03 44_[+1(4.43e-05)]_28 chr10:127511931-12751201 7.30e-01 80 chr17:57232614-57232694 2.49e-04 10_[+4(2.53e-05)]_62 chr1:247171387-247171467 3.64e-04 18_[+4(1.25e-05)]_54 chr22:30988147-30988227 7.48e-01 80 chr22:40440680-40440760 1.03e-02 61_[+3(8.11e-05)]_11 chr19:8455127-8455207 8.59e-05 26_[+4(1.25e-05)]_46 chr19:12662365-12662445 6.44e-05 13_[+4(1.25e-05)]_59 chr11:560858-560938 4.15e-04 1_[+1(6.35e-05)]_31_[+3(1.25e-05)]_\ 32 chr1:156308105-156308185 8.95e-05 7_[+1(9.20e-05)]_51_[+5(7.94e-05)]_\ 6 chr19:49141638-49141718 9.86e-01 80 chr10:4868262-4868342 1.36e-03 18_[+3(1.25e-05)]_54 chr19:6372596-6372676 3.61e-02 41_[+1(7.93e-05)]_31 chr5:150138173-150138253 1.72e-02 17_[+1(1.25e-05)]_55 chr19:4342866-4342946 2.08e-03 64_[+2(2.05e-05)]_8 chr11:17298173-17298253 3.38e-03 4_[+1(4.43e-05)]_24_[+1(1.25e-05)]_\ 36 chr7:43622565-43622645 6.42e-01 80 chr17:38210647-38210727 6.59e-05 29_[+2(8.17e-05)]_15_[+3(4.07e-05)]_\ 20 chr10:120101790-12010187 6.01e-07 47_[+4(2.53e-05)]_11_[+3(4.07e-05)]_\ 6 chrX:47420761-47420841 7.85e-01 80 chr19:15529865-15529945 5.16e-02 80 chr16:19566858-19566938 2.75e-01 80 chr1:43312123-43312203 1.68e-05 19_[+4(3.34e-05)]_37_[+3(3.27e-05)]_\ 8 chr9:130829733-130829813 1.38e-01 80 chrX:48958206-48958286 1.74e-03 6_[+1(1.25e-05)]_24_[+1(1.25e-05)]_\ 34 chr8:42010324-42010404 2.02e-03 2_[+1(1.25e-05)]_22_[+1(4.43e-05)]_\ 23_[+1(4.43e-05)]_9 chr19:19496382-19496462 2.54e-01 31_[+5(7.94e-05)]_41 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************