******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/MAX.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr15:81558336-81558416 1.0000 80 chr2:68589285-68589365 1.0000 80 chr1:21945772-21945852 1.0000 80 chr1:153377305-153377385 1.0000 80 chr1:156251160-156251240 1.0000 80 chr15:65504569-65504649 1.0000 80 chr3:141998938-141999018 1.0000 80 chr3:38692878-38692958 1.0000 80 chr1:6187864-6187944 1.0000 80 chr6:1524390-1524470 1.0000 80 chr8:145800931-145801011 1.0000 80 chr22:20014849-20014929 1.0000 80 chr21:46558669-46558749 1.0000 80 chrX:106920109-106920189 1.0000 80 chr2:175199668-175199748 1.0000 80 chr11:66336086-66336166 1.0000 80 chr8:144025175-144025255 1.0000 80 chr7:1513830-1513910 1.0000 80 chr19:3613081-3613161 1.0000 80 chr19:4809729-4809809 1.0000 80 chr3:195283375-195283455 1.0000 80 chr16:11348810-11348890 1.0000 80 chr5:172710903-172710983 1.0000 80 chr6:25153462-25153542 1.0000 80 chr17:56327201-56327281 1.0000 80 chr2:11919412-11919492 1.0000 80 chr6:109103650-109103730 1.0000 80 chr9:132020873-132020953 1.0000 80 chr19:10138535-10138615 1.0000 80 chr15:83332049-83332129 1.0000 80 chr17:35851468-35851548 1.0000 80 chr12:56513315-56513395 1.0000 80 chr22:20786076-20786156 1.0000 80 chr17:49336681-49336761 1.0000 80 chr1:206718256-206718336 1.0000 80 chr17:66287560-66287640 1.0000 80 chr8:142183475-142183555 1.0000 80 chr19:1568501-1568581 1.0000 80 chr1:54753033-54753113 1.0000 80 chrX:39966759-39966839 1.0000 80 chr5:14264803-14264883 1.0000 80 chr7:150759510-150759590 1.0000 80 chr7:50535830-50535910 1.0000 80 chr9:94661312-94661392 1.0000 80 chr20:36035017-36035097 1.0000 80 chr8:30770556-30770636 1.0000 80 chr15:66155131-66155211 1.0000 80 chr17:36831357-36831437 1.0000 80 chr22:38494058-38494138 1.0000 80 chr22:37957889-37957969 1.0000 80 chr17:42015610-42015690 1.0000 80 chr14:75372504-75372584 1.0000 80 chr16:88519048-88519128 1.0000 80 chr20:56100098-56100178 1.0000 80 chr11:67407641-67407721 1.0000 80 chr19:55691533-55691613 1.0000 80 chr19:2749314-2749394 1.0000 80 chr8:144366942-144367022 1.0000 80 chr6:36066742-36066822 1.0000 80 chr20:34189490-34189570 1.0000 80 chr3:50563577-50563657 1.0000 80 chr1:2130696-2130776 1.0000 80 chr19:45656960-45657040 1.0000 80 chr9:77642681-77642761 1.0000 80 chr16:85450093-85450173 1.0000 80 chr16:22960198-22960278 1.0000 80 chr3:135969948-135970028 1.0000 80 chr12:685372-685452 1.0000 80 chr7:106750483-106750563 1.0000 80 chr1:18649083-18649163 1.0000 80 chr17:77776567-77776647 1.0000 80 chr15:41407836-41407916 1.0000 80 chr3:13460568-13460648 1.0000 80 chr1:93250966-93251046 1.0000 80 chr16:778290-778370 1.0000 80 chr19:38943564-38943644 1.0000 80 chr17:42404319-42404399 1.0000 80 chr16:85496843-85496923 1.0000 80 chr20:35203165-35203245 1.0000 80 chr17:56083951-56084031 1.0000 80 chr2:239147775-239147855 1.0000 80 chr19:56151534-56151614 1.0000 80 chr1:109841398-109841478 1.0000 80 chr21:46961695-46961775 1.0000 80 chr16:53584032-53584112 1.0000 80 chr16:84963675-84963755 1.0000 80 chr3:197687542-197687622 1.0000 80 chr1:43638421-43638501 1.0000 80 chr1:16341320-16341400 1.0000 80 chr2:10183460-10183540 1.0000 80 chr5:176794496-176794576 1.0000 80 chr17:27899968-27900048 1.0000 80 chr17:47755651-47755731 1.0000 80 chr7:54842008-54842088 1.0000 80 chr9:37079501-37079581 1.0000 80 chr11:107729282-10772936 1.0000 80 chr19:50918124-50918204 1.0000 80 chr15:75497192-75497272 1.0000 80 chr19:14115746-14115826 1.0000 80 chr15:99408720-99408800 1.0000 80 chr11:118901667-11890174 1.0000 80 chr7:130626371-130626451 1.0000 80 chr1:154972327-154972407 1.0000 80 chr1:33501805-33501885 1.0000 80 chr17:38333604-38333684 1.0000 80 chr1:6474528-6474608 1.0000 80 chr12:50101443-50101523 1.0000 80 chr11:66095913-66095993 1.0000 80 chr9:140565420-140565500 1.0000 80 chr20:39657104-39657184 1.0000 80 chr7:92533794-92533874 1.0000 80 chr7:101457481-101457561 1.0000 80 chr15:50647643-50647723 1.0000 80 chr5:175963597-175963677 1.0000 80 chr1:15771114-15771194 1.0000 80 chr13:27998776-27998856 1.0000 80 chr21:47609205-47609285 1.0000 80 chr21:35748050-35748130 1.0000 80 chr2:61035716-61035796 1.0000 80 chr1:226814359-226814439 1.0000 80 chr10:86016901-86016981 1.0000 80 chr12:125473578-12547365 1.0000 80 chr5:176797901-176797981 1.0000 80 chr11:66326770-66326850 1.0000 80 chr17:79448461-79448541 1.0000 80 chr12:131311002-13131108 1.0000 80 chr5:96038282-96038362 1.0000 80 chr4:57302540-57302620 1.0000 80 chr5:150226734-150226814 1.0000 80 chr2:30670656-30670736 1.0000 80 chr19:18700390-18700470 1.0000 80 chr7:372712-372792 1.0000 80 chrX:152875475-152875555 1.0000 80 chr17:77290750-77290830 1.0000 80 chr7:913142-913222 1.0000 80 chr11:14913120-14913200 1.0000 80 chr16:68118524-68118604 1.0000 80 chr12:122711048-12271112 1.0000 80 chr8:1771915-1771995 1.0000 80 chr4:110736921-110737001 1.0000 80 chr17:37558905-37558985 1.0000 80 chr9:98173991-98174071 1.0000 80 chr4:17579001-17579081 1.0000 80 chr17:79925884-79925964 1.0000 80 chr17:21220046-21220126 1.0000 80 chr1:230562412-230562492 1.0000 80 chr17:34838896-34838976 1.0000 80 chr6:44191494-44191574 1.0000 80 chr5:158636779-158636859 1.0000 80 chr7:105161988-105162068 1.0000 80 chr4:53579123-53579203 1.0000 80 chr9:140444858-140444938 1.0000 80 chr13:52733792-52733872 1.0000 80 chr4:77008401-77008481 1.0000 80 chrX:153991780-153991860 1.0000 80 chr16:89984380-89984460 1.0000 80 chr19:41197216-41197296 1.0000 80 chr17:74502615-74502695 1.0000 80 chr6:7239220-7239300 1.0000 80 chr17:33307437-33307517 1.0000 80 chr17:79651710-79651790 1.0000 80 chr7:157180011-157180091 1.0000 80 chr20:33814996-33815076 1.0000 80 chr10:88726436-88726516 1.0000 80 chr19:41903237-41903317 1.0000 80 chr6:53275598-53275678 1.0000 80 chr5:176544053-176544133 1.0000 80 chr19:39993561-39993641 1.0000 80 chr19:49631205-49631285 1.0000 80 chr17:34890779-34890859 1.0000 80 chr12:7074402-7074482 1.0000 80 chr7:30323897-30323977 1.0000 80 chr2:43454271-43454351 1.0000 80 chr11:12131955-12132035 1.0000 80 chr1:153438399-153438479 1.0000 80 chr1:32879664-32879744 1.0000 80 chr1:18081791-18081871 1.0000 80 chr16:1979882-1979962 1.0000 80 chr2:120770491-120770571 1.0000 80 chr19:1864227-1864307 1.0000 80 chr1:156427237-156427317 1.0000 80 chr14:91884456-91884536 1.0000 80 chr1:53379371-53379451 1.0000 80 chr10:26986808-26986888 1.0000 80 chr18:23807920-23808000 1.0000 80 chr10:11916867-11916947 1.0000 80 chr5:170815540-170815620 1.0000 80 chr14:106267675-10626775 1.0000 80 chr2:113012316-113012396 1.0000 80 chr19:3360617-3360697 1.0000 80 chr16:29721787-29721867 1.0000 80 chr17:38020407-38020487 1.0000 80 chr3:56717376-56717456 1.0000 80 chr3:176915785-176915865 1.0000 80 chr1:46268510-46268590 1.0000 80 chr9:139137377-139137457 1.0000 80 chr6:47277628-47277708 1.0000 80 chr15:68521733-68521813 1.0000 80 chr11:45868785-45868865 1.0000 80 chr5:96519512-96519592 1.0000 80 chr19:40336952-40337032 1.0000 80 chr17:33469285-33469365 1.0000 80 chr5:72512045-72512125 1.0000 80 chr7:150574299-150574379 1.0000 80 chr17:1633691-1633771 1.0000 80 chr17:6347506-6347586 1.0000 80 chr3:183851916-183851996 1.0000 80 chr3:156271892-156271972 1.0000 80 chr17:38269604-38269684 1.0000 80 chr6:151187430-151187510 1.0000 80 chr7:39620182-39620262 1.0000 80 chr7:23636863-23636943 1.0000 80 chr19:36394675-36394755 1.0000 80 chr19:2151840-2151920 1.0000 80 chr15:55818846-55818926 1.0000 80 chr6:7151080-7151160 1.0000 80 chr11:6291360-6291440 1.0000 80 chr7:92054021-92054101 1.0000 80 chr17:36884684-36884764 1.0000 80 chr20:305121-305201 1.0000 80 chr22:41418626-41418706 1.0000 80 chr16:2228915-2228995 1.0000 80 chr15:34730028-34730108 1.0000 80 chr8:6566502-6566582 1.0000 80 chr1:26202162-26202242 1.0000 80 chr12:64616003-64616083 1.0000 80 chr21:33765250-33765330 1.0000 80 chr8:98788648-98788728 1.0000 80 chr5:32444890-32444970 1.0000 80 chr10:72237663-72237743 1.0000 80 chr15:75135637-75135717 1.0000 80 chr19:5341003-5341083 1.0000 80 chr22:43253431-43253511 1.0000 80 chr19:3367174-3367254 1.0000 80 chr16:3550873-3550953 1.0000 80 chr17:72956997-72957077 1.0000 80 chr1:6454142-6454222 1.0000 80 chr7:2144045-2144125 1.0000 80 chr17:72848555-72848635 1.0000 80 chr7:158799656-158799736 1.0000 80 chr19:19144673-19144753 1.0000 80 chr5:138609794-138609874 1.0000 80 chr1:18085789-18085869 1.0000 80 chr17:71088807-71088887 1.0000 80 chr22:19879847-19879927 1.0000 80 chr2:192543515-192543595 1.0000 80 chr10:71094378-71094458 1.0000 80 chr22:30987850-30987930 1.0000 80 chr1:31654658-31654738 1.0000 80 chr8:37888470-37888550 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_MAX/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/MAX.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.166 C 0.334 G 0.338 T 0.163 Background letter frequencies (from file dataset with add-one prior applied): A 0.166 C 0.334 G 0.338 T 0.163 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF SCACGTGS MEME-1 width = 8 sites = 240 llr = 1720 E-value = 3.2e-254 ******************************************************************************** -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:9:1::: pos.-specific C 5a:9:::4 probability G 4:::9:a5 matrix T :::1:a:1 bits 2.6 2.4 * 2.1 * * 1.8 * * Relative 1.6 ** ** Entropy 1.3 *** ** (10.3 bits) 1.0 ****** 0.8 ****** 0.5 ****** 0.3 ******** 0.0 -------- Multilevel CCACGTGG consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:71094378-71094458 47 3.89e-05 CCAGGAGCCA CCACGTGG TGCCTCCTAG chr2:192543515-192543595 30 3.89e-05 CCTCCCCCAC CCACGTGG CTCTAGTGGC chr19:19144673-19144753 46 3.89e-05 CCACCTTTCC CCACGTGG CCGCGAAGAC chr17:72956997-72957077 16 3.89e-05 CTCAACTCTG CCACGTGG CACGTGTGAC chr15:75135637-75135717 26 3.89e-05 CCTGCAGGGC CCACGTGG GGATACGGAG chr12:64616003-64616083 37 3.89e-05 CCAGCTCGAC CCACGTGG CTCTCCTCGG chr15:55818846-55818926 31 3.89e-05 tagctcttag ccacgtgg ctcctctttc chr19:2151840-2151920 50 3.89e-05 GGCGGGGCGC CCACGTGG AGCTTAGCCG chr17:38269604-38269684 62 3.89e-05 GAAGGGAGGT CCACGTGG AGTGGGCGGA chr3:183851916-183851996 46 3.89e-05 GTCGGAATCG CCACGTGG AAACAGCTCT chr17:1633691-1633771 44 3.89e-05 TGGCCTCTCG CCACGTGG CCCGGAACCT chr17:33469285-33469365 19 3.89e-05 TCCTGCGTCC CCACGTGG AGGAGAAAGA chr5:170815540-170815620 48 3.89e-05 CACGTGGTTG CCACGTGG TTGGGGGAGG chr10:11916867-11916947 52 3.89e-05 GAACCCAGCT CCACGTGG CCTACCTCCC chr1:153438399-153438479 39 3.89e-05 CGAGGCGGTT CCACGTGG CTGGGCCGTC chr10:88726436-88726516 33 3.89e-05 gccgctaggg ccacgtgg agctctctct chr17:33307437-33307517 21 3.89e-05 CAACTACGAC CCACGTGG CAGACGGGGG chr17:74502615-74502695 42 3.89e-05 GCCAAGGAAT CCACGTGG TCAGGGGAAC chrX:153991780-153991860 20 3.89e-05 TCTGCCATAG CCACGTGG TGAACCGGAA chr17:79925884-79925964 48 3.89e-05 CCTGTGATCC CCACGTGG CCTCTGGGGA chr8:1771915-1771995 37 3.89e-05 GCGCGGGCGG CCACGTGG CCTCGAAGGA chr17:77290750-77290830 59 3.89e-05 GGACTGGGGG CCACGTGG AGGAGGCCTT chr7:372712-372792 16 3.89e-05 TCCTTCGTCT CCACGTGG CCTCGGGCCC chr17:79448461-79448541 51 3.89e-05 TCGCGCCGCC CCACGTGG GGCCGCACGG chr12:125473578-12547365 52 3.89e-05 GAAACCCAGC CCACGTGG GTTCCCAGAC chr21:47609205-47609285 35 3.89e-05 TGCTGCTACC CCACGTGG GGGAGAACAC chr20:39657104-39657184 38 3.89e-05 TAAAGGCCCA CCACGTGG CTGCGCGGCC chr7:130626371-130626451 31 3.89e-05 CCTCTGGGTG CCACGTGG CACCTCCACT chr19:14115746-14115826 17 3.89e-05 CCGCTCCTGC CCACGTGG CCCTAGAGGC chr9:37079501-37079581 53 3.89e-05 CAGCTCCCCG CCACGTGG CACTGGGAAG chr17:27899968-27900048 37 3.89e-05 GCGACCTCTG CCACGTGG ACCGCGCGCG chr1:43638421-43638501 51 3.89e-05 GTCTTCGATC CCACGTGG CCAACAATAT chr19:56151534-56151614 6 3.89e-05 TGGCG CCACGTGG CTGGAGGAGG chr12:685372-685452 21 3.89e-05 CACCGAGAGG CCACGTGG GGCGAGGCCT chr16:22960198-22960278 15 3.89e-05 GGATCATGCG CCACGTGG CTTAACAGCA chr16:85450093-85450173 26 3.89e-05 GCAGCCCCTG CCACGTGG GATGCGGTGT chr7:150759510-150759590 42 3.89e-05 CTCCCTGCCC CCACGTGG CCACCGCTCC chr1:206718256-206718336 42 3.89e-05 CCCAGGATGA CCACGTGG GGGAGCCAGA chr19:10138535-10138615 55 3.89e-05 GTACGAGAGG CCACGTGG ACTTGCGCAC chr2:11919412-11919492 37 3.89e-05 GGCGGGCGAC CCACGTGG AGCGCCTTCC chr17:56327201-56327281 34 3.89e-05 CGGAGCCCGG CCACGTGG CGGTCACGTT chr19:4809729-4809809 19 3.89e-05 GCTTTCGTGG CCACGTGG GGCCGGCGGG chr1:153377305-153377385 43 3.89e-05 AAGGACCCAG CCACGTGG TACTGCCTCC chr19:5341003-5341083 28 7.83e-05 GGCCGCGGGA GCACGTGG GGCGCGGGGC chr10:72237663-72237743 30 7.83e-05 GTGAACGCAC GCACGTGG GTGCGTTCAC chr19:40336952-40337032 55 7.83e-05 CGGGGCTTTC GCACGTGG AAAAGAGCGC chr16:29721787-29721867 34 7.83e-05 tctctggtga gcacgtgg tatttctaag chr14:91884456-91884536 15 7.83e-05 TGGGGCCCCA GCACGTGG CGCATCCCTG chr1:156427237-156427317 34 7.83e-05 CTTTTATGGG GCACGTGG CGGCTGATGC chr16:1979882-1979962 55 7.83e-05 GCCGGGGCTT GCACGTGG CCTCGGCGCC chr2:43454271-43454351 39 7.83e-05 CAGCCCGACT GCACGTGG AGTCGCGGTG chr17:34890779-34890859 53 7.83e-05 CGCGGGGCGC GCACGTGG CTTGGCCGGG chr17:79651710-79651790 49 7.83e-05 GTGCCCAGCA GCACGTGG AAAATGCGTC chr19:41197216-41197296 45 7.83e-05 CAGGTGGTCA GCACGTGG GGGGGGGTGG chr4:53579123-53579203 54 7.83e-05 TCAGCCTGGA GCACGTGG CCAGTGGGAC chr6:44191494-44191574 44 7.83e-05 GAGCCGCGCA GCACGTGG CGCGCACGGG chr17:34838896-34838976 24 7.83e-05 GAGCCTCCCC GCACGTGG TGGGGCGCAG chr4:110736921-110737001 27 7.83e-05 GGCCAGAGGG GCACGTGG CGCCGGTGAG chr12:122711048-12271112 36 7.83e-05 AGCAGCTGCA GCACGTGG ACGGTGGACG chr5:96038282-96038362 42 7.83e-05 AGCCCACACA GCACGTGG TCCGCATCAC chr21:35748050-35748130 57 7.83e-05 GTTCCGGCTG GCACGTGG CCCGGGCGGG chr13:27998776-27998856 54 7.83e-05 ACGTGTCTCG GCACGTGG CAGCGCGCCT chr9:140565420-140565500 48 7.83e-05 AAGCCGCTGT GCACGTGG TTGAATGTAA chr11:66095913-66095993 21 7.83e-05 AGGGGACCCT GCACGTGG CCAGGAATGA chr1:154972327-154972407 32 7.83e-05 ACCCTTCGGC GCACGTGG CCCGGCCAGT chr2:239147775-239147855 26 7.83e-05 CGATGGCCTG GCACGTGG ACACGAACGT chr17:42404319-42404399 50 7.83e-05 TGCCGGGTTA GCACGTGG ACTCCGAGGG chr19:2749314-2749394 39 7.83e-05 AGCTGCGGAC GCACGTGG GTGCCCGCGG chr19:55691533-55691613 22 7.83e-05 CCCACCCCCT GCACGTGG GCGGTGGCGC chr16:88519048-88519128 41 7.83e-05 CCCCCACCGC GCACGTGG AGCGTGCGGC chr14:75372504-75372584 31 7.83e-05 TCAGAGCCAG GCACGTGG ACCGTGTCAG chr8:30770556-30770636 28 7.83e-05 CAGAGGCCCT GCACGTGG AAGCTCGAAG chr22:20786076-20786156 32 7.83e-05 CGTTCTCTGA GCACGTGG AGTTGCCTTC chr6:109103650-109103730 46 7.83e-05 AGGGACGCCC GCACGTGG CGTTCTGCGG chr11:66336086-66336166 36 7.83e-05 TTTACAGGAG GCACGTGG GGCGCGCAGG chr1:6187864-6187944 40 7.83e-05 AGAGGCCGGA GCACGTGG TTGGAGGGCG chr3:141998938-141999018 61 7.83e-05 gagctggaga gcacgtgg cattttaagg chr1:18085789-18085869 25 1.17e-04 ttcctggttg ccacgtgc tcacagggcc chr6:151187430-151187510 37 1.17e-04 ACGCCCGGCT CCACGTGC GCAGCCGGCC chr3:156271892-156271972 24 1.17e-04 TTCCAAAATG CCACGTGC AGCCCCAAAC chr17:38020407-38020487 21 1.17e-04 CTCGGCCTCT CCACGTGC TCCTGCCGTC chr19:3360617-3360697 27 1.17e-04 GTCTGCACAT CCACGTGC TGGCGCGTGT chr2:113012316-113012396 39 1.17e-04 CCCGGCCGGC CCACGTGC TCCCCACGGG chr19:1864227-1864307 40 1.17e-04 CGCCCCCAGG CCACGTGC GCGACCCTTC chr1:18081791-18081871 55 1.17e-04 ggctgcggca ccacgtgc agccgctctc chr11:12131955-12132035 45 1.17e-04 GGGCTACAGC CCACGTGC GCCGGCGGCA chr7:30323897-30323977 31 1.17e-04 CGTCGGCGGG CCACGTGC GGGAGGAGGG chr5:176544053-176544133 60 1.17e-04 GCTGTGCTGG CCACGTGC ACCCGGCTGG chr19:41903237-41903317 7 1.17e-04 CCGAGC CCACGTGC GGCTGCAGTT chr16:89984380-89984460 50 1.17e-04 CTGCGGAGCA CCACGTGC GACGGCTGGA chr4:17579001-17579081 44 1.17e-04 CCACCGCTCT CCACGTGC TCGCTGGAGG chr19:18700390-18700470 58 1.17e-04 TGCTCGCCGG CCACGTGC GCAGCCTGCA chr2:30670656-30670736 38 1.17e-04 CAAGTGGTCA CCACGTGC GGGGCTTCGA chr4:57302540-57302620 16 1.17e-04 GAGCTCGCGG CCACGTGC GAGCCGCGAA chr12:131311002-13131108 47 1.17e-04 CACGCGGAGG CCACGTGC ACAGCTCCAC chr1:15771114-15771194 44 1.17e-04 GTGGATCACG CCACGTGC TCCAGGATTG chr11:107729282-10772936 33 1.17e-04 TGCTCCTTGT CCACGTGC GCGCAGGGCC chr16:778290-778370 37 1.17e-04 TCGGGGCCAT CCACGTGC GTTGCCTCCT chr15:41407836-41407916 30 1.17e-04 CCACCGGGTC CCACGTGC ACCTGGTCTA chr8:144366942-144367022 21 1.17e-04 gatccgaggc ccacgtgc ttgctccaca chr20:36035017-36035097 50 1.17e-04 GGGCGCAGGG CCACGTGC GAGCGCAACC chr5:14264803-14264883 34 1.17e-04 CATCGGGCAG CCACGTGC GGCCGCTCCC chr17:49336681-49336761 49 1.17e-04 ATTTCCACCT CCACGTGC AAACCGCCTC chr5:172710903-172710983 28 1.17e-04 AGACCGGGCG CCACGTGC TTACCCGGCG chr8:144025175-144025255 72 1.17e-04 CCTGTAATGC CCACGTGC A chr3:38692878-38692958 47 1.17e-04 ACGTTTCAAC CCACGTGC AGCCGCCTTC chr22:30987850-30987930 28 1.56e-04 ACTTCCTCCC GCACGTGC CCTGCCAAGG chr16:3550873-3550953 40 1.56e-04 CCGTGCGTAT GCACGTGC CGCCGCGTCT chr8:6566502-6566582 27 1.56e-04 AGCACGGAGA GCACGTGC CGCCTCCCCG chr22:41418626-41418706 65 1.56e-04 TCTCCGGGCT GCACGTGC AAGGCCTC chr7:23636863-23636943 44 1.56e-04 GCGGCTGGAA GCACGTGC CGCCGCTTCC chr10:26986808-26986888 46 1.56e-04 GGAGCGGGGA GCACGTGC GTCGCGACGC chr7:157180011-157180091 37 1.56e-04 TGCAGCCATG GCACGTGC GGGAAAGCGG chr7:101457481-101457561 46 1.56e-04 GCGCCGGTGG GCACGTGC GCGGggaccc chr16:53584032-53584112 45 1.56e-04 TACGATCCCA GCACGTGC GTTGGGGGTT chr16:85496843-85496923 32 1.56e-04 TTCAGGCCAC GCACGTGC TCCCCAGCGC chr1:18649083-18649163 35 1.56e-04 TTTCTGAAGA GCACGTGC CCCACGCCCC chr19:45656960-45657040 20 1.56e-04 GGCCGCCACT GCACGTGC TGCAGCTCCT chr19:1568501-1568581 22 1.56e-04 GGGCGCATCC GCACGTGC GGGCGCTGCT chr19:3613081-3613161 35 1.56e-04 TCCGGTTCCA GCACGTGC GCGTCCAGTG chr7:1513830-1513910 69 1.56e-04 AGCAGGCCCA GCACGTGC AGGA chr1:21945772-21945852 30 1.56e-04 CTGCGGGAAC GCACGTGC CGCTGGGAGT chr17:71088807-71088887 41 1.75e-04 TCCCTCCCGC ACACGTGG CCCTCCCGCC chr7:158799656-158799736 56 1.75e-04 AGTCAGCCTC ACACGTGG CCTGCTCAGG chr20:305121-305201 13 1.75e-04 GAACTGGCTC ACACGTGG TGAGCCGGGA chr5:96519512-96519592 33 1.75e-04 GTTTAAGGTG ACACGTGG AGAGCGCGGC chr6:47277628-47277708 41 1.75e-04 GCGCAGGGAC ACACGTGG TGGCGCCGAA chr6:7239220-7239300 54 1.75e-04 CCCTGGGAAA ACACGTGG CCCCTCTGGC chr7:105161988-105162068 49 1.75e-04 CAGGGGTGGA ACACGTGG GCTGGACCCA chr7:913142-913222 57 1.75e-04 AGCGTGTTGA ACACGTGG CTCTCAGACA chr16:84963675-84963755 68 1.75e-04 AACCAGCCTA ACACGTGG AAGGC chr3:50563577-50563657 24 1.75e-04 GACTCAGCAG ACACGTGG CTGGGCTCAG chr12:56513315-56513395 44 1.75e-04 GGGAGGTCAG ACACGTGG TAGCAGGGAC chr3:195283375-195283455 49 1.75e-04 CGCTGAGCTG ACACGTGG AGACTCTTAA chr8:145800931-145801011 41 1.75e-04 agaaagcaac acacgtgg agccatcacc chr2:68589285-68589365 42 1.75e-04 AGGCGCGATG ACACGTGG CAGGAGGGGG chr1:31654658-31654738 45 1.94e-04 GGGCCGTGAC CCACGTGT ACAGAGGCTG chr19:3367174-3367254 40 1.94e-04 CGTTATTGGC CCACGTGT GCATGGAGGG chr1:26202162-26202242 23 1.94e-04 CCCGCCAGGC CCACGTGT TGCACGCGCG chr14:106267675-10626775 23 1.94e-04 AGCTTGGACA CCACGTGT CTGACCAAGG chr1:6474528-6474608 50 1.94e-04 TAACAAGACA CCACGTGT GTGGGGCGTG chr1:33501805-33501885 45 1.94e-04 TCACTCTGCC CCACGTGT TGGAGATGCT chr1:2130696-2130776 32 1.94e-04 TCCTCCATCC CCACGTGT CGGGCTCAGC chr15:81558336-81558416 40 1.94e-04 GCAACTGCTG CCACGTGT GTGCTATTAa chr5:138609794-138609874 47 2.32e-04 GGAGCTCCGA ACACGTGC GCGTGAGTAA chr1:6454142-6454222 57 2.32e-04 GCCTGGAGGT GCACGTGT TGCAGTGAGG chr8:98788648-98788728 34 2.32e-04 TATCTGCCGA GCACGTGT TTCCTTTCTT chr7:39620182-39620262 43 2.32e-04 TGATAAGTTA GCACGTGT TTCATTCCTT chr18:23807920-23808000 26 2.32e-04 CTGACTGGGA ACACGTGC CACAGTTGAC chr1:53379371-53379451 29 2.32e-04 cccaccagag gcacgtgt tgcaactgac chr4:77008401-77008481 33 2.32e-04 TTGTGGAGGC GCACGTGT ACCATGTGTT chr5:158636779-158636859 24 2.32e-04 CCATTCTGAC ACACGTGC TCTCTCACTC chr5:150226734-150226814 23 2.32e-04 GTACTGCTCT GCACGTGT GCTCCCCCGC chr1:226814359-226814439 57 2.32e-04 TCTCACTCCA GCACGTGT TCTCAGAAAG chr2:10183460-10183540 16 2.32e-04 TCCGACCAAA ACACGTGC CGCGTCCCGC chr21:46961695-46961775 27 2.32e-04 TCCCGAAGCA ACACGTGC CTGGGCGCGA chr1:109841398-109841478 24 2.32e-04 TGCAGACAGA GCACGTGT CTGGGTCCCT chr3:135969948-135970028 30 2.32e-04 GGTAGCAAAG GCACGTGT CGGAAGCAGG chr9:94661312-94661392 19 2.32e-04 GCCCGCTTCA GCACGTGT GTCAGGACAA chr6:1524390-1524470 67 2.32e-04 AGTCATGGAA ACACGTGC CACGGC chr1:156251160-156251240 45 2.32e-04 ATGATAAGGC ACACGTGC CACCCCCAGC chr21:33765250-33765330 59 2.60e-04 CGCTTCAGGC CCACATgg cgcaggaaga chr15:34730028-34730108 29 2.60e-04 CAGGGCCGCG CCACATGG CGCACGCGCA chr7:92533794-92533874 49 2.60e-04 ccacatggcc ccacatgg tgCAGTTCTG chr7:50535830-50535910 36 2.60e-04 TGGGACAAAA ACACGTGT CATACGAGTG chr9:132020873-132020953 14 2.60e-04 GGGCTCCCAG ACACGTGT CCCCGGGAGC chr1:32879664-32879744 45 2.80e-04 ggtctagaga gcacatgg cgtttcaagg chr3:197687542-197687622 48 2.80e-04 gtcacccgac gcacatgg tacaacacgg chr6:36066742-36066822 51 2.80e-04 GCAGCGTGGA GCACATGG CTCTAGCTCC chr15:66155131-66155211 42 2.80e-04 ATATACAGAG GCACATGG TGGGGGTGTG chrX:39966759-39966839 47 2.80e-04 CCTGTCAGTC GCACATGG CCTTGGTGCT chr15:83332049-83332129 42 2.80e-04 GGACAGCGGG GCACATGG CTGCCTGGAG chr8:37888470-37888550 41 3.18e-04 TCCAGGACAG CCACATGC CGAGCTGTGC chr6:53275598-53275678 28 3.18e-04 acccctgtga ccatgtgg ttggctggga chr11:118901667-11890174 13 3.18e-04 GTTCCCCGCC CCACATGC CGGGGACGTC chr17:56083951-56084031 44 3.18e-04 GTGGAAGAGC CCACATGC GCCGCATAAT chrX:106920109-106920189 17 3.18e-04 GCATGGAGGC CCACATGC CTTACGCTCC chr22:19879847-19879927 13 3.56e-04 AGCGAAGTCA GCACATGC CCGAGCGGCC chr17:36884684-36884764 61 3.56e-04 GAGTGGGTGA GCATGTGG AGTTGGGTGT chr3:176915785-176915865 48 3.56e-04 CACGCGGCGG GCATGTGG GGGAGTGCGG chr11:45868785-45868865 41 3.84e-04 GGGCGGACCC ACACATGG TAGGAACGTG chr9:98173991-98174071 5 3.84e-04 cctg ccatgtgc caggcctgtg chr5:175963597-175963677 47 3.84e-04 GGATCCCGGA CCATGTGC TCGGCGTGAG chr15:50647643-50647723 45 3.84e-04 CTGCGGACGG CCATGTGC GCGGCGGAGA chr15:75497192-75497272 10 3.84e-04 CCCACCCTG CCATGTGC CTAGGAATCG chr20:35203165-35203245 16 3.84e-04 GACCCAGGAG CCATGTGC TCCGACTCGG chr3:13460568-13460648 36 3.84e-04 CCAGGCTTAC ACACATGG CTGTCACGTG chr7:106750483-106750563 54 3.84e-04 gagagataat ccatgtgc ttgggagaca chr11:67407641-67407721 72 3.84e-04 ACACGCACAG ACACATGG A chr17:66287560-66287640 20 3.84e-04 ccgccgccgA CCATGTGC TGCGAGCGCT chr17:35851468-35851548 69 3.84e-04 AGGAGGCTTG ACACATGG GCCC chr21:46558669-46558749 38 3.84e-04 ACTGAGTGGC CCATGTGC TCGTGGCCTG chr22:20014849-20014929 16 3.84e-04 ccaaatcaGC CCATGTGC AGAGCATGTG chr17:72848555-72848635 21 4.12e-04 AGCCGCCAAC TCACGTGG CTGGCGTCGG chr15:68521733-68521813 37 4.12e-04 CCTAGGAGCG TCACGTGG CGGGTCCCGA chr1:46268510-46268590 44 4.12e-04 TGAGCTACCA CCACATGT TGCTGAGCAG chr9:140444858-140444938 32 4.12e-04 TAAACAGCCC TCACGTGG CTGTCCCGGA chr15:99408720-99408800 18 4.12e-04 CCACCGTCCC TCACGTGG TCCCAGGCCA chr7:150574299-150574379 28 4.31e-04 GACCCTCTAA GCATGTGC CTTTGTCTCT chr2:61035716-61035796 19 4.31e-04 agggaactaa gcatgtgc ggccacaccc chr15:65504569-65504649 39 4.31e-04 GTATGCAGCT GCATGTGC TCTGGGGCTT chr12:7074402-7074482 49 4.60e-04 ACCCAGGAGC GCACATGT GAACGTGCGC chr6:7151080-7151160 43 5.11e-04 AGCCTCAAGG ACACATGT TGAGAGGTTG chr7:92054021-92054101 31 5.60e-04 TCACCGACGG tcacgtgt tcttgctcac chr17:6347506-6347586 53 5.60e-04 AAGCCCGGAG CCACGAGG CTGGCGGCGG chr11:66326770-66326850 10 5.60e-04 GCTGCGGCG CCACGAGG CCTTTGAGAG chr5:176794496-176794576 52 5.60e-04 AGCCCTGACG CCACGAGG AAGGTGCGTg chr19:36394675-36394755 45 5.98e-04 TCCTGGCAGG CCTCGTGG CTGCTGATGC chr19:50918124-50918204 73 5.98e-04 ACAACTGCCC CCTCGTGG chr20:33814996-33815076 38 6.52e-04 CGGGGGCCGA GCACGAGG GTCGGGTTTG chr19:38943564-38943644 27 6.52e-04 AGGACTTGCA GCACGAGG AGAAGCAGAG chr17:21220046-21220126 53 7.77e-04 CCGTCCGCGT CCTCGTGC GTCCTCGGCG chr12:50101443-50101523 39 7.77e-04 CCCTTGACGG CCTCGTGC CGGGCGCCGA chr17:38333604-38333684 31 7.77e-04 CGAGTTCAAG CCTCGTGC GGCGCGGGGG chr20:56100098-56100178 42 7.77e-04 GTGGGCTCTG CCTCGTGC ACCGCGTGCT chr9:139137377-139137457 20 8.26e-04 GAGTAGAACT GCACGAGC CACGCGGCCG chr2:175199668-175199748 47 8.26e-04 AGTCCGCTCG GCACGAGC GCGGGGACGC chr1:16341320-16341400 30 9.91e-04 ACCCCCAACC CCACTTGG CCTTGCCTGG chr9:77642681-77642761 21 9.91e-04 AGGTCAGAAG ACACGAGG CTGTGCAGCA chr13:52733792-52733872 60 1.06e-03 AGCTGTTGTT CCACGTTG CGGTGGAACA chr5:176797901-176797981 26 1.18e-03 CGGCGCTGGA GCGCGTGG TACGAATCTC chr17:42015610-42015690 27 1.18e-03 CCATAGCGGG CCTCGTGT CGCTGCTGAT chr11:6291360-6291440 38 1.36e-03 ACCACTGCAG GCACGAGT GTGGCAGACG chr19:39993561-39993641 38 1.36e-03 GCCGTCGGGA CCGCGTGC ACGCGCCTCT chr1:230562412-230562492 33 1.36e-03 CTTCCGCAGT CCGCGTGC AGCTCCAGGG chr11:14913120-14913200 3 1.36e-03 AG CCGCGTGC AGCTTCCACA chr8:142183475-142183555 34 1.36e-03 GGTGCCTGCG CCGCGTGC TGAAGCCTGC chr5:32444890-32444970 44 1.52e-03 GCTcccccgg gcgcgtgc cggggcctcg chrX:152875475-152875555 35 1.52e-03 GCTCCAGCGT GCGCGTGC GGGGAGGTGC chr22:38494058-38494138 23 1.60e-03 TTCATCTCCC GCACGTTC TTGTCTCTCT chr10:86016901-86016981 17 1.71e-03 AATTGCACGT CCGCGTGT TTGTGCGGGG chr16:11348810-11348890 60 1.71e-03 CGCGGCGCCG CCACGTAG TGCTCCAGCA chr19:49631205-49631285 15 1.74e-03 AGCTGGAGCG CCTCATGG TCACGATGCT chr5:72512045-72512125 34 2.27e-03 GTGGCGCAGA GCACGCGG AGAGGGACCT chr1:93250966-93251046 40 2.27e-03 CAGGGCCCTG GCACGCGG TGCTGACGCG chr7:2144045-2144125 73 2.61e-03 GGCGGCTGCG GCACCTGG chr16:2228915-2228995 50 2.81e-03 CCGCGGCCAG GCACGCGC TTGTCTCCTC chr16:68118524-68118604 57 3.31e-03 GGCCTCAAAC GCGCATGC TGTCAAGGGA chr22:43253431-43253511 19 3.51e-03 GGCTCGCGCG CCATTTGC GGCGCGGCTC chr17:37558905-37558985 43 4.28e-03 GGAGAAACAA GCGTGTGT GAGCGAGTAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:71094378-71094458 3.9e-05 46_[+1]_26 chr2:192543515-192543595 3.9e-05 29_[+1]_43 chr19:19144673-19144753 3.9e-05 45_[+1]_27 chr17:72956997-72957077 3.9e-05 15_[+1]_57 chr15:75135637-75135717 3.9e-05 25_[+1]_47 chr12:64616003-64616083 3.9e-05 36_[+1]_36 chr15:55818846-55818926 3.9e-05 30_[+1]_42 chr19:2151840-2151920 3.9e-05 49_[+1]_23 chr17:38269604-38269684 3.9e-05 61_[+1]_11 chr3:183851916-183851996 3.9e-05 45_[+1]_27 chr17:1633691-1633771 3.9e-05 43_[+1]_29 chr17:33469285-33469365 3.9e-05 18_[+1]_54 chr5:170815540-170815620 3.9e-05 47_[+1]_25 chr10:11916867-11916947 3.9e-05 51_[+1]_21 chr1:153438399-153438479 3.9e-05 38_[+1]_34 chr10:88726436-88726516 3.9e-05 32_[+1]_40 chr17:33307437-33307517 3.9e-05 20_[+1]_52 chr17:74502615-74502695 3.9e-05 41_[+1]_31 chrX:153991780-153991860 3.9e-05 19_[+1]_53 chr17:79925884-79925964 3.9e-05 47_[+1]_25 chr8:1771915-1771995 3.9e-05 36_[+1]_36 chr17:77290750-77290830 3.9e-05 58_[+1]_14 chr7:372712-372792 3.9e-05 15_[+1]_57 chr17:79448461-79448541 3.9e-05 50_[+1]_22 chr12:125473578-12547365 3.9e-05 51_[+1]_21 chr21:47609205-47609285 3.9e-05 34_[+1]_38 chr20:39657104-39657184 3.9e-05 37_[+1]_35 chr7:130626371-130626451 3.9e-05 30_[+1]_42 chr19:14115746-14115826 3.9e-05 16_[+1]_56 chr9:37079501-37079581 3.9e-05 52_[+1]_20 chr17:27899968-27900048 3.9e-05 36_[+1]_36 chr1:43638421-43638501 3.9e-05 50_[+1]_22 chr19:56151534-56151614 3.9e-05 5_[+1]_67 chr12:685372-685452 3.9e-05 20_[+1]_52 chr16:22960198-22960278 3.9e-05 14_[+1]_58 chr16:85450093-85450173 3.9e-05 25_[+1]_47 chr7:150759510-150759590 3.9e-05 41_[+1]_31 chr1:206718256-206718336 3.9e-05 41_[+1]_31 chr19:10138535-10138615 3.9e-05 54_[+1]_18 chr2:11919412-11919492 3.9e-05 36_[+1]_36 chr17:56327201-56327281 3.9e-05 33_[+1]_39 chr19:4809729-4809809 3.9e-05 18_[+1]_54 chr1:153377305-153377385 3.9e-05 42_[+1]_30 chr19:5341003-5341083 7.8e-05 27_[+1]_45 chr10:72237663-72237743 7.8e-05 29_[+1]_43 chr19:40336952-40337032 7.8e-05 54_[+1]_18 chr16:29721787-29721867 7.8e-05 33_[+1]_39 chr14:91884456-91884536 7.8e-05 14_[+1]_58 chr1:156427237-156427317 7.8e-05 33_[+1]_39 chr16:1979882-1979962 7.8e-05 54_[+1]_18 chr2:43454271-43454351 7.8e-05 38_[+1]_34 chr17:34890779-34890859 7.8e-05 52_[+1]_20 chr17:79651710-79651790 7.8e-05 48_[+1]_24 chr19:41197216-41197296 7.8e-05 44_[+1]_28 chr4:53579123-53579203 7.8e-05 53_[+1]_19 chr6:44191494-44191574 7.8e-05 43_[+1]_29 chr17:34838896-34838976 7.8e-05 23_[+1]_49 chr4:110736921-110737001 7.8e-05 26_[+1]_46 chr12:122711048-12271112 7.8e-05 35_[+1]_37 chr5:96038282-96038362 7.8e-05 41_[+1]_31 chr21:35748050-35748130 7.8e-05 56_[+1]_16 chr13:27998776-27998856 7.8e-05 53_[+1]_19 chr9:140565420-140565500 7.8e-05 47_[+1]_25 chr11:66095913-66095993 7.8e-05 20_[+1]_52 chr1:154972327-154972407 7.8e-05 31_[+1]_41 chr2:239147775-239147855 7.8e-05 25_[+1]_47 chr17:42404319-42404399 7.8e-05 49_[+1]_23 chr19:2749314-2749394 7.8e-05 38_[+1]_34 chr19:55691533-55691613 7.8e-05 21_[+1]_51 chr16:88519048-88519128 7.8e-05 40_[+1]_32 chr14:75372504-75372584 7.8e-05 30_[+1]_42 chr8:30770556-30770636 7.8e-05 27_[+1]_45 chr22:20786076-20786156 7.8e-05 31_[+1]_41 chr6:109103650-109103730 7.8e-05 45_[+1]_27 chr11:66336086-66336166 7.8e-05 35_[+1]_37 chr1:6187864-6187944 7.8e-05 39_[+1]_33 chr3:141998938-141999018 7.8e-05 60_[+1]_12 chr1:18085789-18085869 0.00012 24_[+1]_48 chr6:151187430-151187510 0.00012 36_[+1]_36 chr3:156271892-156271972 0.00012 23_[+1]_49 chr17:38020407-38020487 0.00012 20_[+1]_52 chr19:3360617-3360697 0.00012 26_[+1]_46 chr2:113012316-113012396 0.00012 38_[+1]_34 chr19:1864227-1864307 0.00012 39_[+1]_33 chr1:18081791-18081871 0.00012 54_[+1]_18 chr11:12131955-12132035 0.00012 44_[+1]_28 chr7:30323897-30323977 0.00012 30_[+1]_42 chr5:176544053-176544133 0.00012 59_[+1]_13 chr19:41903237-41903317 0.00012 6_[+1]_66 chr16:89984380-89984460 0.00012 49_[+1]_23 chr4:17579001-17579081 0.00012 43_[+1]_29 chr19:18700390-18700470 0.00012 57_[+1]_15 chr2:30670656-30670736 0.00012 37_[+1]_35 chr4:57302540-57302620 0.00012 15_[+1]_57 chr12:131311002-13131108 0.00012 46_[+1]_26 chr1:15771114-15771194 0.00012 43_[+1]_29 chr11:107729282-10772936 0.00012 32_[+1]_40 chr16:778290-778370 0.00012 36_[+1]_36 chr15:41407836-41407916 0.00012 29_[+1]_43 chr8:144366942-144367022 0.00012 20_[+1]_52 chr20:36035017-36035097 0.00012 49_[+1]_23 chr5:14264803-14264883 0.00012 33_[+1]_39 chr17:49336681-49336761 0.00012 48_[+1]_24 chr5:172710903-172710983 0.00012 27_[+1]_45 chr8:144025175-144025255 0.00012 71_[+1]_1 chr3:38692878-38692958 0.00012 46_[+1]_26 chr22:30987850-30987930 0.00016 27_[+1]_45 chr16:3550873-3550953 0.00016 39_[+1]_33 chr8:6566502-6566582 0.00016 26_[+1]_46 chr22:41418626-41418706 0.00016 64_[+1]_8 chr7:23636863-23636943 0.00016 43_[+1]_29 chr10:26986808-26986888 0.00016 45_[+1]_27 chr7:157180011-157180091 0.00016 36_[+1]_36 chr7:101457481-101457561 0.00016 45_[+1]_27 chr16:53584032-53584112 0.00016 44_[+1]_28 chr16:85496843-85496923 0.00016 31_[+1]_41 chr1:18649083-18649163 0.00016 34_[+1]_38 chr19:45656960-45657040 0.00016 19_[+1]_53 chr19:1568501-1568581 0.00016 21_[+1]_51 chr19:3613081-3613161 0.00016 34_[+1]_38 chr7:1513830-1513910 0.00016 68_[+1]_4 chr1:21945772-21945852 0.00016 29_[+1]_43 chr17:71088807-71088887 0.00018 40_[+1]_32 chr7:158799656-158799736 0.00018 55_[+1]_17 chr20:305121-305201 0.00018 12_[+1]_60 chr5:96519512-96519592 0.00018 32_[+1]_40 chr6:47277628-47277708 0.00018 40_[+1]_32 chr6:7239220-7239300 0.00018 53_[+1]_19 chr7:105161988-105162068 0.00018 48_[+1]_24 chr7:913142-913222 0.00018 56_[+1]_16 chr16:84963675-84963755 0.00018 67_[+1]_5 chr3:50563577-50563657 0.00018 23_[+1]_49 chr12:56513315-56513395 0.00018 43_[+1]_29 chr3:195283375-195283455 0.00018 48_[+1]_24 chr8:145800931-145801011 0.00018 40_[+1]_32 chr2:68589285-68589365 0.00018 41_[+1]_31 chr1:31654658-31654738 0.00019 44_[+1]_28 chr19:3367174-3367254 0.00019 39_[+1]_33 chr1:26202162-26202242 0.00019 22_[+1]_50 chr14:106267675-10626775 0.00019 22_[+1]_50 chr1:6474528-6474608 0.00019 49_[+1]_23 chr1:33501805-33501885 0.00019 44_[+1]_28 chr1:2130696-2130776 0.00019 31_[+1]_41 chr15:81558336-81558416 0.00019 39_[+1]_33 chr5:138609794-138609874 0.00023 46_[+1]_26 chr1:6454142-6454222 0.00023 56_[+1]_16 chr8:98788648-98788728 0.00023 33_[+1]_39 chr7:39620182-39620262 0.00023 42_[+1]_30 chr18:23807920-23808000 0.00023 25_[+1]_47 chr1:53379371-53379451 0.00023 28_[+1]_44 chr4:77008401-77008481 0.00023 32_[+1]_40 chr5:158636779-158636859 0.00023 23_[+1]_49 chr5:150226734-150226814 0.00023 22_[+1]_50 chr1:226814359-226814439 0.00023 56_[+1]_16 chr2:10183460-10183540 0.00023 15_[+1]_57 chr21:46961695-46961775 0.00023 26_[+1]_46 chr1:109841398-109841478 0.00023 23_[+1]_49 chr3:135969948-135970028 0.00023 29_[+1]_43 chr9:94661312-94661392 0.00023 18_[+1]_54 chr6:1524390-1524470 0.00023 66_[+1]_6 chr1:156251160-156251240 0.00023 44_[+1]_28 chr21:33765250-33765330 0.00026 58_[+1]_14 chr15:34730028-34730108 0.00026 28_[+1]_44 chr7:92533794-92533874 0.00026 48_[+1]_24 chr7:50535830-50535910 0.00026 35_[+1]_37 chr9:132020873-132020953 0.00026 13_[+1]_59 chr1:32879664-32879744 0.00028 44_[+1]_28 chr3:197687542-197687622 0.00028 47_[+1]_25 chr6:36066742-36066822 0.00028 50_[+1]_22 chr15:66155131-66155211 0.00028 41_[+1]_31 chrX:39966759-39966839 0.00028 46_[+1]_26 chr15:83332049-83332129 0.00028 41_[+1]_31 chr8:37888470-37888550 0.00032 40_[+1]_32 chr6:53275598-53275678 0.00032 27_[+1]_45 chr11:118901667-11890174 0.00032 12_[+1]_60 chr17:56083951-56084031 0.00032 43_[+1]_29 chrX:106920109-106920189 0.00032 16_[+1]_56 chr22:19879847-19879927 0.00036 12_[+1]_60 chr17:36884684-36884764 0.00036 60_[+1]_12 chr3:176915785-176915865 0.00036 47_[+1]_25 chr11:45868785-45868865 0.00038 40_[+1]_32 chr9:98173991-98174071 0.00038 4_[+1]_68 chr5:175963597-175963677 0.00038 46_[+1]_26 chr15:50647643-50647723 0.00038 44_[+1]_28 chr15:75497192-75497272 0.00038 9_[+1]_63 chr20:35203165-35203245 0.00038 15_[+1]_57 chr3:13460568-13460648 0.00038 35_[+1]_37 chr7:106750483-106750563 0.00038 53_[+1]_19 chr11:67407641-67407721 0.00038 71_[+1]_1 chr17:66287560-66287640 0.00038 19_[+1]_53 chr17:35851468-35851548 0.00038 68_[+1]_4 chr21:46558669-46558749 0.00038 37_[+1]_35 chr22:20014849-20014929 0.00038 15_[+1]_57 chr17:72848555-72848635 0.00041 20_[+1]_52 chr15:68521733-68521813 0.00041 36_[+1]_36 chr1:46268510-46268590 0.00041 43_[+1]_29 chr9:140444858-140444938 0.00041 31_[+1]_41 chr15:99408720-99408800 0.00041 17_[+1]_55 chr7:150574299-150574379 0.00043 27_[+1]_45 chr2:61035716-61035796 0.00043 18_[+1]_54 chr15:65504569-65504649 0.00043 38_[+1]_34 chr12:7074402-7074482 0.00046 48_[+1]_24 chr6:7151080-7151160 0.00051 42_[+1]_30 chr7:92054021-92054101 0.00056 30_[+1]_42 chr17:6347506-6347586 0.00056 52_[+1]_20 chr11:66326770-66326850 0.00056 9_[+1]_63 chr5:176794496-176794576 0.00056 51_[+1]_21 chr19:36394675-36394755 0.0006 44_[+1]_28 chr19:50918124-50918204 0.0006 72_[+1] chr20:33814996-33815076 0.00065 37_[+1]_35 chr19:38943564-38943644 0.00065 26_[+1]_46 chr17:21220046-21220126 0.00078 52_[+1]_20 chr12:50101443-50101523 0.00078 38_[+1]_34 chr17:38333604-38333684 0.00078 30_[+1]_42 chr20:56100098-56100178 0.00078 41_[+1]_31 chr9:139137377-139137457 0.00083 19_[+1]_53 chr2:175199668-175199748 0.00083 46_[+1]_26 chr1:16341320-16341400 0.00099 29_[+1]_43 chr9:77642681-77642761 0.00099 20_[+1]_52 chr13:52733792-52733872 0.0011 59_[+1]_13 chr5:176797901-176797981 0.0012 25_[+1]_47 chr17:42015610-42015690 0.0012 26_[+1]_46 chr11:6291360-6291440 0.0014 37_[+1]_35 chr19:39993561-39993641 0.0014 37_[+1]_35 chr1:230562412-230562492 0.0014 32_[+1]_40 chr11:14913120-14913200 0.0014 2_[+1]_70 chr8:142183475-142183555 0.0014 33_[+1]_39 chr5:32444890-32444970 0.0015 43_[+1]_29 chrX:152875475-152875555 0.0015 34_[+1]_38 chr22:38494058-38494138 0.0016 22_[+1]_50 chr10:86016901-86016981 0.0017 16_[+1]_56 chr16:11348810-11348890 0.0017 59_[+1]_13 chr19:49631205-49631285 0.0017 14_[+1]_58 chr5:72512045-72512125 0.0023 33_[+1]_39 chr1:93250966-93251046 0.0023 39_[+1]_33 chr7:2144045-2144125 0.0026 72_[+1] chr16:2228915-2228995 0.0028 49_[+1]_23 chr16:68118524-68118604 0.0033 56_[+1]_16 chr22:43253431-43253511 0.0035 18_[+1]_54 chr17:37558905-37558985 0.0043 42_[+1]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SCACGTGS width=8 seqs=240 chr10:71094378-71094458 ( 47) CCACGTGG 1 chr2:192543515-192543595 ( 30) CCACGTGG 1 chr19:19144673-19144753 ( 46) CCACGTGG 1 chr17:72956997-72957077 ( 16) CCACGTGG 1 chr15:75135637-75135717 ( 26) CCACGTGG 1 chr12:64616003-64616083 ( 37) CCACGTGG 1 chr15:55818846-55818926 ( 31) CCACGTGG 1 chr19:2151840-2151920 ( 50) CCACGTGG 1 chr17:38269604-38269684 ( 62) CCACGTGG 1 chr3:183851916-183851996 ( 46) CCACGTGG 1 chr17:1633691-1633771 ( 44) CCACGTGG 1 chr17:33469285-33469365 ( 19) CCACGTGG 1 chr5:170815540-170815620 ( 48) CCACGTGG 1 chr10:11916867-11916947 ( 52) CCACGTGG 1 chr1:153438399-153438479 ( 39) CCACGTGG 1 chr10:88726436-88726516 ( 33) CCACGTGG 1 chr17:33307437-33307517 ( 21) CCACGTGG 1 chr17:74502615-74502695 ( 42) CCACGTGG 1 chrX:153991780-153991860 ( 20) CCACGTGG 1 chr17:79925884-79925964 ( 48) CCACGTGG 1 chr8:1771915-1771995 ( 37) CCACGTGG 1 chr17:77290750-77290830 ( 59) CCACGTGG 1 chr7:372712-372792 ( 16) CCACGTGG 1 chr17:79448461-79448541 ( 51) CCACGTGG 1 chr12:125473578-12547365 ( 52) CCACGTGG 1 chr21:47609205-47609285 ( 35) CCACGTGG 1 chr20:39657104-39657184 ( 38) CCACGTGG 1 chr7:130626371-130626451 ( 31) CCACGTGG 1 chr19:14115746-14115826 ( 17) CCACGTGG 1 chr9:37079501-37079581 ( 53) CCACGTGG 1 chr17:27899968-27900048 ( 37) CCACGTGG 1 chr1:43638421-43638501 ( 51) CCACGTGG 1 chr19:56151534-56151614 ( 6) CCACGTGG 1 chr12:685372-685452 ( 21) CCACGTGG 1 chr16:22960198-22960278 ( 15) CCACGTGG 1 chr16:85450093-85450173 ( 26) CCACGTGG 1 chr7:150759510-150759590 ( 42) CCACGTGG 1 chr1:206718256-206718336 ( 42) CCACGTGG 1 chr19:10138535-10138615 ( 55) CCACGTGG 1 chr2:11919412-11919492 ( 37) CCACGTGG 1 chr17:56327201-56327281 ( 34) CCACGTGG 1 chr19:4809729-4809809 ( 19) CCACGTGG 1 chr1:153377305-153377385 ( 43) CCACGTGG 1 chr19:5341003-5341083 ( 28) GCACGTGG 1 chr10:72237663-72237743 ( 30) GCACGTGG 1 chr19:40336952-40337032 ( 55) GCACGTGG 1 chr16:29721787-29721867 ( 34) GCACGTGG 1 chr14:91884456-91884536 ( 15) GCACGTGG 1 chr1:156427237-156427317 ( 34) GCACGTGG 1 chr16:1979882-1979962 ( 55) GCACGTGG 1 chr2:43454271-43454351 ( 39) GCACGTGG 1 chr17:34890779-34890859 ( 53) GCACGTGG 1 chr17:79651710-79651790 ( 49) GCACGTGG 1 chr19:41197216-41197296 ( 45) GCACGTGG 1 chr4:53579123-53579203 ( 54) GCACGTGG 1 chr6:44191494-44191574 ( 44) GCACGTGG 1 chr17:34838896-34838976 ( 24) GCACGTGG 1 chr4:110736921-110737001 ( 27) GCACGTGG 1 chr12:122711048-12271112 ( 36) GCACGTGG 1 chr5:96038282-96038362 ( 42) GCACGTGG 1 chr21:35748050-35748130 ( 57) GCACGTGG 1 chr13:27998776-27998856 ( 54) GCACGTGG 1 chr9:140565420-140565500 ( 48) GCACGTGG 1 chr11:66095913-66095993 ( 21) GCACGTGG 1 chr1:154972327-154972407 ( 32) GCACGTGG 1 chr2:239147775-239147855 ( 26) GCACGTGG 1 chr17:42404319-42404399 ( 50) GCACGTGG 1 chr19:2749314-2749394 ( 39) GCACGTGG 1 chr19:55691533-55691613 ( 22) GCACGTGG 1 chr16:88519048-88519128 ( 41) GCACGTGG 1 chr14:75372504-75372584 ( 31) GCACGTGG 1 chr8:30770556-30770636 ( 28) GCACGTGG 1 chr22:20786076-20786156 ( 32) GCACGTGG 1 chr6:109103650-109103730 ( 46) GCACGTGG 1 chr11:66336086-66336166 ( 36) GCACGTGG 1 chr1:6187864-6187944 ( 40) GCACGTGG 1 chr3:141998938-141999018 ( 61) GCACGTGG 1 chr1:18085789-18085869 ( 25) CCACGTGC 1 chr6:151187430-151187510 ( 37) CCACGTGC 1 chr3:156271892-156271972 ( 24) CCACGTGC 1 chr17:38020407-38020487 ( 21) CCACGTGC 1 chr19:3360617-3360697 ( 27) CCACGTGC 1 chr2:113012316-113012396 ( 39) CCACGTGC 1 chr19:1864227-1864307 ( 40) CCACGTGC 1 chr1:18081791-18081871 ( 55) CCACGTGC 1 chr11:12131955-12132035 ( 45) CCACGTGC 1 chr7:30323897-30323977 ( 31) CCACGTGC 1 chr5:176544053-176544133 ( 60) CCACGTGC 1 chr19:41903237-41903317 ( 7) CCACGTGC 1 chr16:89984380-89984460 ( 50) CCACGTGC 1 chr4:17579001-17579081 ( 44) CCACGTGC 1 chr19:18700390-18700470 ( 58) CCACGTGC 1 chr2:30670656-30670736 ( 38) CCACGTGC 1 chr4:57302540-57302620 ( 16) CCACGTGC 1 chr12:131311002-13131108 ( 47) CCACGTGC 1 chr1:15771114-15771194 ( 44) CCACGTGC 1 chr11:107729282-10772936 ( 33) CCACGTGC 1 chr16:778290-778370 ( 37) CCACGTGC 1 chr15:41407836-41407916 ( 30) CCACGTGC 1 chr8:144366942-144367022 ( 21) CCACGTGC 1 chr20:36035017-36035097 ( 50) CCACGTGC 1 chr5:14264803-14264883 ( 34) CCACGTGC 1 chr17:49336681-49336761 ( 49) CCACGTGC 1 chr5:172710903-172710983 ( 28) CCACGTGC 1 chr8:144025175-144025255 ( 72) CCACGTGC 1 chr3:38692878-38692958 ( 47) CCACGTGC 1 chr22:30987850-30987930 ( 28) GCACGTGC 1 chr16:3550873-3550953 ( 40) GCACGTGC 1 chr8:6566502-6566582 ( 27) GCACGTGC 1 chr22:41418626-41418706 ( 65) GCACGTGC 1 chr7:23636863-23636943 ( 44) GCACGTGC 1 chr10:26986808-26986888 ( 46) GCACGTGC 1 chr7:157180011-157180091 ( 37) GCACGTGC 1 chr7:101457481-101457561 ( 46) GCACGTGC 1 chr16:53584032-53584112 ( 45) GCACGTGC 1 chr16:85496843-85496923 ( 32) GCACGTGC 1 chr1:18649083-18649163 ( 35) GCACGTGC 1 chr19:45656960-45657040 ( 20) GCACGTGC 1 chr19:1568501-1568581 ( 22) GCACGTGC 1 chr19:3613081-3613161 ( 35) GCACGTGC 1 chr7:1513830-1513910 ( 69) GCACGTGC 1 chr1:21945772-21945852 ( 30) GCACGTGC 1 chr17:71088807-71088887 ( 41) ACACGTGG 1 chr7:158799656-158799736 ( 56) ACACGTGG 1 chr20:305121-305201 ( 13) ACACGTGG 1 chr5:96519512-96519592 ( 33) ACACGTGG 1 chr6:47277628-47277708 ( 41) ACACGTGG 1 chr6:7239220-7239300 ( 54) ACACGTGG 1 chr7:105161988-105162068 ( 49) ACACGTGG 1 chr7:913142-913222 ( 57) ACACGTGG 1 chr16:84963675-84963755 ( 68) ACACGTGG 1 chr3:50563577-50563657 ( 24) ACACGTGG 1 chr12:56513315-56513395 ( 44) ACACGTGG 1 chr3:195283375-195283455 ( 49) ACACGTGG 1 chr8:145800931-145801011 ( 41) ACACGTGG 1 chr2:68589285-68589365 ( 42) ACACGTGG 1 chr1:31654658-31654738 ( 45) CCACGTGT 1 chr19:3367174-3367254 ( 40) CCACGTGT 1 chr1:26202162-26202242 ( 23) CCACGTGT 1 chr14:106267675-10626775 ( 23) CCACGTGT 1 chr1:6474528-6474608 ( 50) CCACGTGT 1 chr1:33501805-33501885 ( 45) CCACGTGT 1 chr1:2130696-2130776 ( 32) CCACGTGT 1 chr15:81558336-81558416 ( 40) CCACGTGT 1 chr5:138609794-138609874 ( 47) ACACGTGC 1 chr1:6454142-6454222 ( 57) GCACGTGT 1 chr8:98788648-98788728 ( 34) GCACGTGT 1 chr7:39620182-39620262 ( 43) GCACGTGT 1 chr18:23807920-23808000 ( 26) ACACGTGC 1 chr1:53379371-53379451 ( 29) GCACGTGT 1 chr4:77008401-77008481 ( 33) GCACGTGT 1 chr5:158636779-158636859 ( 24) ACACGTGC 1 chr5:150226734-150226814 ( 23) GCACGTGT 1 chr1:226814359-226814439 ( 57) GCACGTGT 1 chr2:10183460-10183540 ( 16) ACACGTGC 1 chr21:46961695-46961775 ( 27) ACACGTGC 1 chr1:109841398-109841478 ( 24) GCACGTGT 1 chr3:135969948-135970028 ( 30) GCACGTGT 1 chr9:94661312-94661392 ( 19) GCACGTGT 1 chr6:1524390-1524470 ( 67) ACACGTGC 1 chr1:156251160-156251240 ( 45) ACACGTGC 1 chr21:33765250-33765330 ( 59) CCACATGG 1 chr15:34730028-34730108 ( 29) CCACATGG 1 chr7:92533794-92533874 ( 49) CCACATGG 1 chr7:50535830-50535910 ( 36) ACACGTGT 1 chr9:132020873-132020953 ( 14) ACACGTGT 1 chr1:32879664-32879744 ( 45) GCACATGG 1 chr3:197687542-197687622 ( 48) GCACATGG 1 chr6:36066742-36066822 ( 51) GCACATGG 1 chr15:66155131-66155211 ( 42) GCACATGG 1 chrX:39966759-39966839 ( 47) GCACATGG 1 chr15:83332049-83332129 ( 42) GCACATGG 1 chr8:37888470-37888550 ( 41) CCACATGC 1 chr6:53275598-53275678 ( 28) CCATGTGG 1 chr11:118901667-11890174 ( 13) CCACATGC 1 chr17:56083951-56084031 ( 44) CCACATGC 1 chrX:106920109-106920189 ( 17) CCACATGC 1 chr22:19879847-19879927 ( 13) GCACATGC 1 chr17:36884684-36884764 ( 61) GCATGTGG 1 chr3:176915785-176915865 ( 48) GCATGTGG 1 chr11:45868785-45868865 ( 41) ACACATGG 1 chr9:98173991-98174071 ( 5) CCATGTGC 1 chr5:175963597-175963677 ( 47) CCATGTGC 1 chr15:50647643-50647723 ( 45) CCATGTGC 1 chr15:75497192-75497272 ( 10) CCATGTGC 1 chr20:35203165-35203245 ( 16) CCATGTGC 1 chr3:13460568-13460648 ( 36) ACACATGG 1 chr7:106750483-106750563 ( 54) CCATGTGC 1 chr11:67407641-67407721 ( 72) ACACATGG 1 chr17:66287560-66287640 ( 20) CCATGTGC 1 chr17:35851468-35851548 ( 69) ACACATGG 1 chr21:46558669-46558749 ( 38) CCATGTGC 1 chr22:20014849-20014929 ( 16) CCATGTGC 1 chr17:72848555-72848635 ( 21) TCACGTGG 1 chr15:68521733-68521813 ( 37) TCACGTGG 1 chr1:46268510-46268590 ( 44) CCACATGT 1 chr9:140444858-140444938 ( 32) TCACGTGG 1 chr15:99408720-99408800 ( 18) TCACGTGG 1 chr7:150574299-150574379 ( 28) GCATGTGC 1 chr2:61035716-61035796 ( 19) GCATGTGC 1 chr15:65504569-65504649 ( 39) GCATGTGC 1 chr12:7074402-7074482 ( 49) GCACATGT 1 chr6:7151080-7151160 ( 43) ACACATGT 1 chr7:92054021-92054101 ( 31) TCACGTGT 1 chr17:6347506-6347586 ( 53) CCACGAGG 1 chr11:66326770-66326850 ( 10) CCACGAGG 1 chr5:176794496-176794576 ( 52) CCACGAGG 1 chr19:36394675-36394755 ( 45) CCTCGTGG 1 chr19:50918124-50918204 ( 73) CCTCGTGG 1 chr20:33814996-33815076 ( 38) GCACGAGG 1 chr19:38943564-38943644 ( 27) GCACGAGG 1 chr17:21220046-21220126 ( 53) CCTCGTGC 1 chr12:50101443-50101523 ( 39) CCTCGTGC 1 chr17:38333604-38333684 ( 31) CCTCGTGC 1 chr20:56100098-56100178 ( 42) CCTCGTGC 1 chr9:139137377-139137457 ( 20) GCACGAGC 1 chr2:175199668-175199748 ( 47) GCACGAGC 1 chr1:16341320-16341400 ( 30) CCACTTGG 1 chr9:77642681-77642761 ( 21) ACACGAGG 1 chr13:52733792-52733872 ( 60) CCACGTTG 1 chr5:176797901-176797981 ( 26) GCGCGTGG 1 chr17:42015610-42015690 ( 27) CCTCGTGT 1 chr11:6291360-6291440 ( 38) GCACGAGT 1 chr19:39993561-39993641 ( 38) CCGCGTGC 1 chr1:230562412-230562492 ( 33) CCGCGTGC 1 chr11:14913120-14913200 ( 3) CCGCGTGC 1 chr8:142183475-142183555 ( 34) CCGCGTGC 1 chr5:32444890-32444970 ( 44) GCGCGTGC 1 chrX:152875475-152875555 ( 35) GCGCGTGC 1 chr22:38494058-38494138 ( 23) GCACGTTC 1 chr10:86016901-86016981 ( 17) CCGCGTGT 1 chr16:11348810-11348890 ( 60) CCACGTAG 1 chr19:49631205-49631285 ( 15) CCTCATGG 1 chr5:72512045-72512125 ( 34) GCACGCGG 1 chr1:93250966-93251046 ( 40) GCACGCGG 1 chr7:2144045-2144125 ( 73) GCACCTGG 1 chr16:2228915-2228995 ( 50) GCACGCGC 1 chr16:68118524-68118604 ( 57) GCGCATGC 1 chr22:43253431-43253511 ( 19) CCATTTGC 1 chr17:37558905-37558985 ( 43) GCGTGTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.51548 E= 3.2e-254 -45 56 12 -296 -1455 158 -1455 -1455 248 -1455 -302 -229 -1455 148 -1455 -120 -79 -632 140 -428 -214 -474 -1455 255 -531 -1455 155 -428 -1455 9 65 -48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 240 E= 3.2e-254 0.120833 0.491667 0.366667 0.020833 0.000000 1.000000 0.000000 0.000000 0.925000 0.000000 0.041667 0.033333 0.000000 0.929167 0.000000 0.070833 0.095833 0.004167 0.891667 0.008333 0.037500 0.012500 0.000000 0.950000 0.004167 0.000000 0.987500 0.008333 0.000000 0.354167 0.529167 0.116667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCACGTGS MEME-1 regular expression -------------------------------------------------------------------------------- [CG]CACGTG[GC] -------------------------------------------------------------------------------- Time 4.81 secs. ******************************************************************************** ******************************************************************************** MOTIF TTWCATTT MEME-2 width = 8 sites = 2 llr = 26 E-value = 6.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::5:a::: pos.-specific C :::a:::: probability G :::::::: matrix T aa5::aaa bits 2.6 ** **** 2.4 ** **** 2.1 ** **** 1.8 ** **** Relative 1.6 ******** Entropy 1.3 ******** (18.9 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTACATTT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr15:55818846-55818926 45 2.10e-06 gtggctcctc tttcattt cctcacatac chr6:25153462-25153542 66 2.10e-06 AGGACTTCGG TTACATTT CCGTCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:55818846-55818926 2.1e-06 44_[+2]_28 chr6:25153462-25153542 2.1e-06 65_[+2]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTWCATTT width=8 seqs=2 chr15:55818846-55818926 ( 45) TTTCATTT 1 chr6:25153462-25153542 ( 66) TTACATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 6.5e+003 -765 -765 -765 262 -765 -765 -765 262 159 -765 -765 162 -765 158 -765 -765 259 -765 -765 -765 -765 -765 -765 262 -765 -765 -765 262 -765 -765 -765 262 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 6.5e+003 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTWCATTT MEME-2 regular expression -------------------------------------------------------------------------------- TT[AT]CATTT -------------------------------------------------------------------------------- Time 8.22 secs. ******************************************************************************** ******************************************************************************** MOTIF WTTWCWAA MEME-3 width = 8 sites = 3 llr = 36 E-value = 2.5e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 7::3:3aa pos.-specific C ::::a::: probability G :::::::: matrix T 3aa7:7:: bits 2.6 ** ** 2.4 ** ** 2.1 ** ** 1.8 ** ** Relative 1.6 ******** Entropy 1.3 ******** (17.1 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATTTCTAA consensus T A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:29721787-29721867 43 1.08e-06 agcacgtggt atttctaa gccacctagt chr16:53584032-53584112 26 4.33e-06 GAGCCATAAC ATTACTAA ATACGATCCC chr3:197687542-197687622 13 6.49e-06 CGAGGagtgg ttttcaaa cttgagcgtg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:29721787-29721867 1.1e-06 42_[+3]_30 chr16:53584032-53584112 4.3e-06 25_[+3]_47 chr3:197687542-197687622 6.5e-06 12_[+3]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WTTWCWAA width=8 seqs=3 chr16:29721787-29721867 ( 43) ATTTCTAA 1 chr16:53584032-53584112 ( 26) ATTACTAA 1 chr3:197687542-197687622 ( 13) TTTTCAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.0179 E= 2.5e+004 201 -823 -823 103 -823 -823 -823 262 -823 -823 -823 262 101 -823 -823 203 -823 158 -823 -823 101 -823 -823 203 259 -823 -823 -823 259 -823 -823 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 2.5e+004 0.666667 0.000000 0.000000 0.333333 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.333333 0.000000 0.000000 0.666667 0.000000 1.000000 0.000000 0.000000 0.333333 0.000000 0.000000 0.666667 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WTTWCWAA MEME-3 regular expression -------------------------------------------------------------------------------- [AT]TT[TA]C[TA]AA -------------------------------------------------------------------------------- Time 11.59 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTKTGTT MEME-4 width = 8 sites = 2 llr = 25 E-value = 1.8e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G :::5:a:: matrix T aaa5a:aa bits 2.6 *** * ** 2.4 *** * ** 2.1 *** * ** 1.8 *** * ** Relative 1.6 *** **** Entropy 1.3 *** **** (18.4 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTTGTGTT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:3550873-3550953 67 1.03e-06 TTCGCTTCGC TTTTTGTT TGTCCC chr8:98788648-98788728 68 3.18e-06 GCCCGTGGGC TTTGTGTT TCGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:3550873-3550953 1e-06 66_[+4]_6 chr8:98788648-98788728 3.2e-06 67_[+4]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTKTGTT width=8 seqs=2 chr16:3550873-3550953 ( 67) TTTTTGTT 1 chr8:98788648-98788728 ( 68) TTTGTGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.8e+004 -765 -765 -765 262 -765 -765 -765 262 -765 -765 -765 262 -765 -765 56 162 -765 -765 -765 262 -765 -765 156 -765 -765 -765 -765 262 -765 -765 -765 262 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.8e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTKTGTT MEME-4 regular expression -------------------------------------------------------------------------------- TTT[GT]TGTT -------------------------------------------------------------------------------- Time 14.96 secs. ******************************************************************************** ******************************************************************************** MOTIF TWTCTTCT MEME-5 width = 8 sites = 2 llr = 25 E-value = 1.8e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :5:::::: pos.-specific C :::a::a: probability G :::::::: matrix T a5a:aa:a bits 2.6 * * ** * 2.4 * * ** * 2.1 * * ** * 1.8 * * ** * Relative 1.6 ******** Entropy 1.3 ******** (17.9 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TATCTTCT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:98788648-98788728 46 4.22e-06 ACGTGTTTCC TTTCTTCT TAAAGCCCGT chr1:43638421-43638501 66 4.22e-06 TGGCCAACAA TATCTTCT ACTTCGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:98788648-98788728 4.2e-06 45_[+5]_27 chr1:43638421-43638501 4.2e-06 65_[+5]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TWTCTTCT width=8 seqs=2 chr8:98788648-98788728 ( 46) TTTCTTCT 1 chr1:43638421-43638501 ( 66) TATCTTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.8e+004 -765 -765 -765 262 159 -765 -765 162 -765 -765 -765 262 -765 158 -765 -765 -765 -765 -765 262 -765 -765 -765 262 -765 158 -765 -765 -765 -765 -765 262 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.8e+004 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TWTCTTCT MEME-5 regular expression -------------------------------------------------------------------------------- T[AT]TCTTCT -------------------------------------------------------------------------------- Time 18.28 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:81558336-81558416 8.47e-03 80 chr2:68589285-68589365 7.10e-03 80 chr1:21945772-21945852 5.19e-01 80 chr1:153377305-153377385 2.50e-01 42_[+1(3.89e-05)]_30 chr1:156251160-156251240 1.93e-01 80 chr15:65504569-65504649 1.46e-01 80 chr3:141998938-141999018 2.60e-03 60_[+1(7.83e-05)]_12 chr3:38692878-38692958 8.98e-02 80 chr1:6187864-6187944 4.07e-01 39_[+1(7.83e-05)]_33 chr6:1524390-1524470 5.98e-01 80 chr8:145800931-145801011 1.13e-01 80 chr22:20014849-20014929 4.14e-01 80 chr21:46558669-46558749 8.95e-02 80 chrX:106920109-106920189 2.54e-01 80 chr2:175199668-175199748 5.31e-01 80 chr11:66336086-66336166 8.09e-04 35_[+1(7.83e-05)]_37 chr8:144025175-144025255 2.35e-02 80 chr7:1513830-1513910 4.45e-01 80 chr19:3613081-3613161 4.91e-01 80 chr19:4809729-4809809 8.44e-02 18_[+1(3.89e-05)]_54 chr3:195283375-195283455 6.67e-02 80 chr16:11348810-11348890 8.78e-01 80 chr5:172710903-172710983 4.68e-01 80 chr6:25153462-25153542 9.73e-03 65_[+2(2.10e-06)]_7 chr17:56327201-56327281 1.50e-01 33_[+1(3.89e-05)]_39 chr2:11919412-11919492 1.60e-01 36_[+1(3.89e-05)]_36 chr6:109103650-109103730 1.38e-01 45_[+1(7.83e-05)]_27 chr9:132020873-132020953 1.69e-01 80 chr19:10138535-10138615 8.33e-02 54_[+1(3.89e-05)]_18 chr15:83332049-83332129 1.33e-01 80 chr17:35851468-35851548 3.17e-01 80 chr12:56513315-56513395 3.72e-01 80 chr22:20786076-20786156 3.18e-02 31_[+1(7.83e-05)]_41 chr17:49336681-49336761 1.27e-02 80 chr1:206718256-206718336 2.04e-01 41_[+1(3.89e-05)]_31 chr17:66287560-66287640 4.85e-01 80 chr8:142183475-142183555 1.46e-01 80 chr19:1568501-1568581 4.24e-01 80 chr1:54753033-54753113 6.20e-01 80 chrX:39966759-39966839 3.07e-02 80 chr5:14264803-14264883 1.31e-01 80 chr7:150759510-150759590 1.41e-03 41_[+1(3.89e-05)]_22_[+2(8.36e-05)]_\ 1 chr7:50535830-50535910 2.83e-01 80 chr9:94661312-94661392 1.88e-01 80 chr20:36035017-36035097 4.35e-01 80 chr8:30770556-30770636 2.85e-01 27_[+1(7.83e-05)]_45 chr15:66155131-66155211 2.15e-01 80 chr17:36831357-36831437 1.00e+00 80 chr22:38494058-38494138 1.57e-02 80 chr22:37957889-37957969 5.71e-02 80 chr17:42015610-42015690 6.03e-01 80 chr14:75372504-75372584 7.32e-02 30_[+1(7.83e-05)]_42 chr16:88519048-88519128 1.62e-01 40_[+1(7.83e-05)]_32 chr20:56100098-56100178 7.36e-02 80 chr11:67407641-67407721 6.52e-01 80 chr19:55691533-55691613 3.72e-01 21_[+1(7.83e-05)]_51 chr19:2749314-2749394 2.19e-01 38_[+1(7.83e-05)]_34 chr8:144366942-144367022 1.93e-01 80 chr6:36066742-36066822 2.02e-02 80 chr20:34189490-34189570 1.00e+00 80 chr3:50563577-50563657 3.91e-01 80 chr1:2130696-2130776 3.91e-01 80 chr19:45656960-45657040 4.34e-01 80 chr9:77642681-77642761 7.92e-01 80 chr16:85450093-85450173 2.01e-01 25_[+1(3.89e-05)]_47 chr16:22960198-22960278 1.54e-01 14_[+1(3.89e-05)]_58 chr3:135969948-135970028 8.52e-02 80 chr12:685372-685452 2.46e-01 20_[+1(3.89e-05)]_52 chr7:106750483-106750563 2.86e-01 80 chr1:18649083-18649163 2.31e-04 80 chr17:77776567-77776647 1.00e+00 80 chr15:41407836-41407916 1.71e-01 80 chr3:13460568-13460648 2.27e-01 80 chr1:93250966-93251046 7.44e-01 80 chr16:778290-778370 2.88e-01 80 chr19:38943564-38943644 6.98e-01 80 chr17:42404319-42404399 3.89e-01 49_[+1(7.83e-05)]_23 chr16:85496843-85496923 2.49e-01 80 chr20:35203165-35203245 4.83e-02 80 chr17:56083951-56084031 5.23e-01 80 chr2:239147775-239147855 2.71e-01 25_[+1(7.83e-05)]_47 chr19:56151534-56151614 2.71e-01 5_[+1(3.89e-05)]_67 chr1:109841398-109841478 1.30e-01 80 chr21:46961695-46961775 1.51e-01 80 chr16:53584032-53584112 1.87e-06 25_[+3(4.33e-06)]_47 chr16:84963675-84963755 7.09e-04 12_[+3(2.41e-05)]_60 chr3:197687542-197687622 2.30e-03 12_[+3(6.49e-06)]_60 chr1:43638421-43638501 5.99e-07 34_[+4(4.44e-05)]_8_[+1(3.89e-05)]_\ 7_[+5(4.22e-06)]_7 chr1:16341320-16341400 6.41e-01 80 chr2:10183460-10183540 6.07e-01 80 chr5:176794496-176794576 6.51e-01 80 chr17:27899968-27900048 2.64e-01 36_[+1(3.89e-05)]_36 chr17:47755651-47755731 9.29e-01 80 chr7:54842008-54842088 9.68e-01 80 chr9:37079501-37079581 2.27e-01 52_[+1(3.89e-05)]_20 chr11:107729282-10772936 2.04e-01 80 chr19:50918124-50918204 7.18e-01 80 chr15:75497192-75497272 3.32e-01 80 chr19:14115746-14115826 2.84e-02 16_[+1(3.89e-05)]_56 chr15:99408720-99408800 1.76e-01 80 chr11:118901667-11890174 4.19e-01 80 chr7:130626371-130626451 6.78e-02 30_[+1(3.89e-05)]_42 chr1:154972327-154972407 8.71e-04 31_[+1(7.83e-05)]_41 chr1:33501805-33501885 4.80e-02 80 chr17:38333604-38333684 4.77e-01 80 chr1:6474528-6474608 8.10e-02 80 chr12:50101443-50101523 7.02e-01 80 chr11:66095913-66095993 3.79e-01 20_[+1(7.83e-05)]_52 chr9:140565420-140565500 5.32e-03 47_[+1(7.83e-05)]_25 chr20:39657104-39657184 1.76e-01 37_[+1(3.89e-05)]_35 chr7:92533794-92533874 3.98e-03 80 chr7:101457481-101457561 5.35e-01 80 chr15:50647643-50647723 6.94e-01 80 chr5:175963597-175963677 2.79e-01 80 chr1:15771114-15771194 3.94e-01 80 chr13:27998776-27998856 3.84e-01 53_[+1(7.83e-05)]_19 chr21:47609205-47609285 1.31e-02 34_[+1(3.89e-05)]_38 chr21:35748050-35748130 2.79e-01 56_[+1(7.83e-05)]_16 chr2:61035716-61035796 1.20e-03 51_[+2(7.51e-05)]_21 chr1:226814359-226814439 6.94e-03 80 chr10:86016901-86016981 1.37e-01 80 chr12:125473578-12547365 1.31e-01 51_[+1(3.89e-05)]_21 chr5:176797901-176797981 7.87e-01 80 chr11:66326770-66326850 4.06e-01 80 chr17:79448461-79448541 7.07e-02 50_[+1(3.89e-05)]_22 chr12:131311002-13131108 4.67e-01 80 chr5:96038282-96038362 8.26e-02 41_[+1(7.83e-05)]_31 chr4:57302540-57302620 4.39e-01 80 chr5:150226734-150226814 1.50e-02 80 chr2:30670656-30670736 9.28e-02 80 chr19:18700390-18700470 4.80e-01 80 chr7:372712-372792 2.56e-02 15_[+1(3.89e-05)]_57 chrX:152875475-152875555 8.71e-01 80 chr17:77290750-77290830 2.04e-01 58_[+1(3.89e-05)]_14 chr7:913142-913222 3.33e-01 80 chr11:14913120-14913200 7.34e-01 80 chr16:68118524-68118604 3.92e-01 80 chr12:122711048-12271112 3.51e-01 35_[+1(7.83e-05)]_37 chr8:1771915-1771995 2.94e-01 36_[+1(3.89e-05)]_36 chr4:110736921-110737001 1.31e-02 26_[+1(7.83e-05)]_29_[+3(5.26e-05)]_\ 9 chr17:37558905-37558985 7.45e-01 80 chr9:98173991-98174071 7.89e-02 80 chr4:17579001-17579081 4.55e-01 80 chr17:79925884-79925964 1.11e-01 47_[+1(3.89e-05)]_25 chr17:21220046-21220126 7.33e-01 80 chr1:230562412-230562492 6.08e-01 80 chr17:34838896-34838976 4.09e-01 23_[+1(7.83e-05)]_49 chr6:44191494-44191574 4.05e-01 43_[+1(7.83e-05)]_29 chr5:158636779-158636859 2.81e-01 80 chr7:105161988-105162068 5.04e-01 80 chr4:53579123-53579203 1.91e-02 53_[+1(7.83e-05)]_19 chr9:140444858-140444938 8.28e-02 80 chr13:52733792-52733872 1.06e-02 80 chr4:77008401-77008481 7.25e-02 80 chrX:153991780-153991860 3.38e-02 19_[+1(3.89e-05)]_53 chr16:89984380-89984460 4.57e-01 80 chr19:41197216-41197296 3.96e-01 44_[+1(7.83e-05)]_28 chr17:74502615-74502695 1.93e-01 41_[+1(3.89e-05)]_31 chr6:7239220-7239300 3.68e-01 80 chr17:33307437-33307517 1.19e-01 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******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************