******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/MAFK.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3:150565376-150565456 1.0000 80 chr15:26346755-26346835 1.0000 80 chr10:33690387-33690467 1.0000 80 chr4:142165730-142165810 1.0000 80 chr2:185173589-185173669 1.0000 80 chr3:50555398-50555478 1.0000 80 chr11:85515116-85515196 1.0000 80 chr1:93796332-93796412 1.0000 80 chr12:40149433-40149513 1.0000 80 chr7:143145672-143145752 1.0000 80 chr2:190896865-190896945 1.0000 80 chr4:66700593-66700673 1.0000 80 chr11:90584528-90584608 1.0000 80 chr2:89888694-89888774 1.0000 80 chr7:89232452-89232532 1.0000 80 chr5:161029906-161029986 1.0000 80 chr18:22988424-22988504 1.0000 80 chr10:30049215-30049295 1.0000 80 chr13:49745654-49745734 1.0000 80 chr14:89809850-89809930 1.0000 80 chr12:100605636-10060571 1.0000 80 chr16:17779464-17779544 1.0000 80 chr4:126611169-126611249 1.0000 80 chrX:37976108-37976188 1.0000 80 chr4:133680512-133680592 1.0000 80 chrX:141637863-141637943 1.0000 80 chr17:32313255-32313335 1.0000 80 chr14:70828760-70828840 1.0000 80 chr6:64321618-64321698 1.0000 80 chr18:12517294-12517374 1.0000 80 chr6:67374174-67374254 1.0000 80 chr12:86623716-86623796 1.0000 80 chr20:51100087-51100167 1.0000 80 chr8:65481399-65481479 1.0000 80 chr3:162650447-162650527 1.0000 80 chr3:59739681-59739761 1.0000 80 chr9:130950606-130950686 1.0000 80 chr6:119982390-119982470 1.0000 80 chr10:84200646-84200726 1.0000 80 chr11:120952184-12095226 1.0000 80 chr8:111931440-111931520 1.0000 80 chr4:80855969-80856049 1.0000 80 chr1:84383798-84383878 1.0000 80 chr7:133725904-133725984 1.0000 80 chr2:67749420-67749500 1.0000 80 chr2:206687488-206687568 1.0000 80 chr16:6172606-6172686 1.0000 80 chr7:95880244-95880324 1.0000 80 chr6:135518360-135518440 1.0000 80 chrX:28688361-28688441 1.0000 80 chr6:12369748-12369828 1.0000 80 chr11:83493526-83493606 1.0000 80 chr8:118125061-118125141 1.0000 80 chr1:119420453-119420533 1.0000 80 chr7:85150763-85150843 1.0000 80 chr4:138551564-138551644 1.0000 80 chr8:121920828-121920908 1.0000 80 chr17:47116059-47116139 1.0000 80 chr4:74719956-74720036 1.0000 80 chr20:45481105-45481185 1.0000 80 chr3:189294427-189294507 1.0000 80 chr13:22830403-22830483 1.0000 80 chr5:9186345-9186425 1.0000 80 chr20:51056036-51056116 1.0000 80 chr1:243475263-243475343 1.0000 80 chr9:78189655-78189735 1.0000 80 chr1:224590502-224590582 1.0000 80 chr4:130975132-130975212 1.0000 80 chr18:14122262-14122342 1.0000 80 chr2:200568074-200568154 1.0000 80 chr8:8745326-8745406 1.0000 80 chr8:10314777-10314857 1.0000 80 chr13:99544477-99544557 1.0000 80 chr18:30052970-30053050 1.0000 80 chr10:60216103-60216183 1.0000 80 chr5:108804078-108804158 1.0000 80 chr20:21374003-21374083 1.0000 80 chr7:119951243-119951323 1.0000 80 chr12:75803751-75803831 1.0000 80 chr2:120075293-120075373 1.0000 80 chr14:52813661-52813741 1.0000 80 chr17:61211014-61211094 1.0000 80 chr2:31278977-31279057 1.0000 80 chr1:216940462-216940542 1.0000 80 chr1:119911253-119911333 1.0000 80 chr5:80150558-80150638 1.0000 80 chrX:27750231-27750311 1.0000 80 chr5:89841492-89841572 1.0000 80 chr8:27043538-27043618 1.0000 80 chr18:3723313-3723393 1.0000 80 chr7:39444662-39444742 1.0000 80 chr7:117823068-117823148 1.0000 80 chr2:79820748-79820828 1.0000 80 chr10:59063487-59063567 1.0000 80 chr6:122467040-122467120 1.0000 80 chr12:94057621-94057701 1.0000 80 chr16:48718219-48718299 1.0000 80 chr3:5309731-5309811 1.0000 80 chr8:117802055-117802135 1.0000 80 chr5:82968144-82968224 1.0000 80 chr2:75718710-75718790 1.0000 80 chr6:32335573-32335653 1.0000 80 chr7:143631950-143632030 1.0000 80 chr6:149523366-149523446 1.0000 80 chr19:6963615-6963695 1.0000 80 chr4:7019536-7019616 1.0000 80 chr10:22215452-22215532 1.0000 80 chr4:77874502-77874582 1.0000 80 chr3:167776426-167776506 1.0000 80 chr3:4305862-4305942 1.0000 80 chr11:61418719-61418799 1.0000 80 chr2:208221487-208221567 1.0000 80 chr3:120460336-120460416 1.0000 80 chr6:157285339-157285419 1.0000 80 chr8:59785223-59785303 1.0000 80 chr16:79098297-79098377 1.0000 80 chr5:94714990-94715070 1.0000 80 chr6:101287437-101287517 1.0000 80 chr8:90143329-90143409 1.0000 80 chr2:72753903-72753983 1.0000 80 chr10:13544484-13544564 1.0000 80 chr3:173817670-173817750 1.0000 80 chr5:126167029-126167109 1.0000 80 chr2:191847137-191847217 1.0000 80 chr11:111666214-11166629 1.0000 80 chr3:64367176-64367256 1.0000 80 chr6:44886795-44886875 1.0000 80 chr18:19410649-19410729 1.0000 80 chr7:153532275-153532355 1.0000 80 chr18:9289844-9289924 1.0000 80 chr1:212141214-212141294 1.0000 80 chr9:6473309-6473389 1.0000 80 chr10:115992695-11599277 1.0000 80 chr7:17814678-17814758 1.0000 80 chr1:233041237-233041317 1.0000 80 chr15:65285794-65285874 1.0000 80 chr4:69106493-69106573 1.0000 80 chr1:93400098-93400178 1.0000 80 chr2:182262889-182262969 1.0000 80 chr12:114271415-11427149 1.0000 80 chr10:30060478-30060558 1.0000 80 chr6:68618435-68618515 1.0000 80 chr7:78399756-78399836 1.0000 80 chr7:124650751-124650831 1.0000 80 chr16:71662822-71662902 1.0000 80 chr4:15304686-15304766 1.0000 80 chr2:45398407-45398487 1.0000 80 chr12:46260240-46260320 1.0000 80 chr12:5618458-5618538 1.0000 80 chr15:37345401-37345481 1.0000 80 chr1:228588462-228588542 1.0000 80 chr5:42555373-42555453 1.0000 80 chr7:25002951-25003031 1.0000 80 chr8:124821630-124821710 1.0000 80 chr1:234430345-234430425 1.0000 80 chr20:30515713-30515793 1.0000 80 chr20:44963246-44963326 1.0000 80 chr8:125489960-125490040 1.0000 80 chr11:13034846-13034926 1.0000 80 chr13:97902507-97902587 1.0000 80 chr5:105657111-105657191 1.0000 80 chr12:6242942-6243022 1.0000 80 chr19:40576120-40576200 1.0000 80 chr18:11661565-11661645 1.0000 80 chr1:174397295-174397375 1.0000 80 chr2:20191819-20191899 1.0000 80 chr5:52769632-52769712 1.0000 80 chr9:75454289-75454369 1.0000 80 chr8:111929200-111929280 1.0000 80 chr9:102858953-102859033 1.0000 80 chr6:89080014-89080094 1.0000 80 chrX:43696185-43696265 1.0000 80 chr10:77196825-77196905 1.0000 80 chr16:71837362-71837442 1.0000 80 chr1:10254703-10254783 1.0000 80 chr16:76072158-76072238 1.0000 80 chr8:138472385-138472465 1.0000 80 chr18:55665232-55665312 1.0000 80 chr7:27694955-27695035 1.0000 80 chr15:94314809-94314889 1.0000 80 chr11:71682886-71682966 1.0000 80 chr4:138590197-138590277 1.0000 80 chr12:121258847-12125892 1.0000 80 chr1:41319438-41319518 1.0000 80 chr1:248229081-248229161 1.0000 80 chr5:95278281-95278361 1.0000 80 chr2:169375415-169375495 1.0000 80 chr16:63091397-63091477 1.0000 80 chr3:142974727-142974807 1.0000 80 chr8:93738691-93738771 1.0000 80 chr5:176673725-176673805 1.0000 80 chr6:157871327-157871407 1.0000 80 chr12:96409000-96409080 1.0000 80 chr16:48993814-48993894 1.0000 80 chr20:33332310-33332390 1.0000 80 chr8:100721499-100721579 1.0000 80 chr1:200596354-200596434 1.0000 80 chr6:130012535-130012615 1.0000 80 chr12:42100334-42100414 1.0000 80 chr4:113168335-113168415 1.0000 80 chr7:92478720-92478800 1.0000 80 chr1:183951446-183951526 1.0000 80 chr2:51459326-51459406 1.0000 80 chr12:133115360-13311544 1.0000 80 chr5:76912905-76912985 1.0000 80 chr6:113126000-113126080 1.0000 80 chr16:66492023-66492103 1.0000 80 chr2:176311088-176311168 1.0000 80 chr14:68622885-68622965 1.0000 80 chr7:156466761-156466841 1.0000 80 chr1:61917046-61917126 1.0000 80 chr6:140330562-140330642 1.0000 80 chr8:17798196-17798276 1.0000 80 chr13:106356356-10635643 1.0000 80 chr2:178737197-178737277 1.0000 80 chr5:37226637-37226717 1.0000 80 chr1:33401786-33401866 1.0000 80 chrX:34650699-34650779 1.0000 80 chr12:90369507-90369587 1.0000 80 chr10:62548469-62548549 1.0000 80 chr1:235080342-235080422 1.0000 80 chr1:26020715-26020795 1.0000 80 chr10:45299422-45299502 1.0000 80 chr21:45364660-45364740 1.0000 80 chr16:55034702-55034782 1.0000 80 chr2:41641406-41641486 1.0000 80 chr20:45192603-45192683 1.0000 80 chr2:176109583-176109663 1.0000 80 chr6:26427792-26427872 1.0000 80 chr14:66619157-66619237 1.0000 80 chr2:189472393-189472473 1.0000 80 chr16:83667046-83667126 1.0000 80 chr1:179414888-179414968 1.0000 80 chr22:31011826-31011906 1.0000 80 chr1:91590873-91590953 1.0000 80 chr1:215663669-215663749 1.0000 80 chrX:150123582-150123662 1.0000 80 chr1:26049941-26050021 1.0000 80 chr14:22456348-22456428 1.0000 80 chr17:53314696-53314776 1.0000 80 chr6:25898655-25898735 1.0000 80 chr3:182587015-182587095 1.0000 80 chr8:88943644-88943724 1.0000 80 chr11:85884153-85884233 1.0000 80 chr10:15407876-15407956 1.0000 80 chr8:133982638-133982718 1.0000 80 chrX:65452304-65452384 1.0000 80 chr20:42360223-42360303 1.0000 80 chr5:163759751-163759831 1.0000 80 chr8:63498731-63498811 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_MAFK/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/MAFK.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.311 C 0.193 G 0.192 T 0.304 Background letter frequencies (from file dataset with add-one prior applied): A 0.311 C 0.193 G 0.192 T 0.304 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGCTGAST MEME-1 width = 8 sites = 213 llr = 1744 E-value = 5.8e-289 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:1::a11 pos.-specific C ::9:::5: probability G :a::9:31 matrix T 9::a::18 bits 2.4 2.1 * 1.9 * * 1.7 ***** Relative 1.4 ***** Entropy 1.2 ****** (11.8 bits) 1.0 ****** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGCTGACT consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:15407876-15407956 36 1.20e-05 ATCTTACATA TGCTGACT CAGCTGTTTA chr11:85884153-85884233 29 1.20e-05 GAAGTGCTAG TGCTGACT CAGCATGCTG chrX:150123582-150123662 35 1.20e-05 actccggatt tgctgact cagcaactct chr2:189472393-189472473 36 1.20e-05 gcaagccaca tgctgact cagcagttct chr6:26427792-26427872 36 1.20e-05 gtggcggctg tgCTGACT CAGCATAACG chr2:41641406-41641486 45 1.20e-05 TATATTCAAA TGCTGACT CAGCGATTGT chr16:55034702-55034782 37 1.20e-05 gcttgaaagg tgctgact catcgatttg chr10:62548469-62548549 27 1.20e-05 TGTGTTATAT TGCTGACT TGGCATTTAG chr12:90369507-90369587 42 1.20e-05 AGCTTAGCTT TGCTGACT CAGCAAATAT chr8:17798196-17798276 29 1.20e-05 ATGCTGTAAT TGCTGACT TGGCAAAATG chr2:176311088-176311168 34 1.20e-05 CTGATCAAAA TGCTGACT CAGCCTTTAG chr12:42100334-42100414 46 1.20e-05 ctagcatagt tgctgact cagcaaagac chr20:33332310-33332390 29 1.20e-05 TCAAAAGAAA TGCTGACT CAACATTTTC chr16:48993814-48993894 37 1.20e-05 GCTCCCACTC TGCTGACT CAGCATTTAT chr1:41319438-41319518 24 1.20e-05 tcacagctAT TGCTGACT CAGCACTGCT chr12:121258847-12125892 29 1.20e-05 ATACAAAATC TGCTGACT GAGCAAATTC chr15:94314809-94314889 36 1.20e-05 GTGGACCAAC TGCTGACT CAGCAACTTC chr16:71837362-71837442 27 1.20e-05 TGTTAGTTAA TGCTGACT CAACACATTT chr18:11661565-11661645 33 1.20e-05 tcagtgaaac tgctgact cagctggtct chr19:40576120-40576200 32 1.20e-05 GATTAAATAC TGCTGACT AAGCACAACT chr5:105657111-105657191 39 1.20e-05 AGGGGCAAAG TGCTGACT CATCATGATG chr1:228588462-228588542 33 1.20e-05 TCTGTCCTGC TGCTGACT CAGCATTTCA chr16:71662822-71662902 37 1.20e-05 GGAGAGTTAT TGCTGACT CAACACTTTC chr10:30060478-30060558 44 1.20e-05 ACTGGATTCC TGCTGACT CAGCAAAAAT chr12:114271415-11427149 37 1.20e-05 cacacagaaa tgctgact tggcagaaag chr18:9289844-9289924 43 1.20e-05 CTTTGAGAAC TGCTGACT TAGCACTTCT chr3:64367176-64367256 28 1.20e-05 TGATATAttc tgctgact cagcaccctt chr5:94714990-94715070 41 1.20e-05 GTCTCAGGGA TGCTGACT AAGCATTTTT chr16:79098297-79098377 37 1.20e-05 gcgtgaaaag tgctgact cagcacctgC chr4:77874502-77874582 27 1.20e-05 ATATGCCTAT TGCTGACT CAGCAAATAT chr10:22215452-22215532 26 1.20e-05 TAGAAGATAA TGCTGACT GTGCTCTTTT chr6:32335573-32335653 30 1.20e-05 ACGAAAGATA TGCTGACT CAACAAATCA chr2:75718710-75718790 30 1.20e-05 GATTCAGAGA TGCTGACT CAGCAAGATT chr16:48718219-48718299 30 1.20e-05 ATTCTGTGAA TGCTGACT CAGCAGTCCT chr10:59063487-59063567 27 1.20e-05 CCAGTAGGGA TGCTGACT CAGCAAAATC chr2:79820748-79820828 39 1.20e-05 GTGGCTGAAA TGCTGACT CAGCATCTTT chrX:27750231-27750311 41 1.20e-05 accagaaatc tgctgact tagcaaattt chr5:80150558-80150638 35 1.20e-05 TTCCTTTTTT TGCTGACT CAACATAAAT chr1:216940462-216940542 40 1.20e-05 TGTCTCATCA TGCTGACT CAGCAAACTA chr2:31278977-31279057 27 1.20e-05 gctcccaaaa tgctgact cagcaggact chr12:75803751-75803831 26 1.20e-05 ACAAAATTTA TGCTGACT TAGCATTTTA chr13:99544477-99544557 26 1.20e-05 CATCCATTTC TGCTGACT CAACAATTCC chr4:130975132-130975212 27 1.20e-05 GCAACTATAT TGCTGACT GTGCATTTTT chr20:51056036-51056116 38 1.20e-05 CGTCACAGAC TGCTGACT CAGCACAAAG chr5:9186345-9186425 29 1.20e-05 TGGGGAAGAC TGCTGACT CAGCATAGTG chr3:189294427-189294507 41 1.20e-05 GTTATGcatt tgctgact cagcaaacct chr11:83493526-83493606 33 1.20e-05 aatcaattaa tgctgact aagcagatta chrX:28688361-28688441 26 1.20e-05 TACATACTTT TGCTGACT CATCAGTTTT chr7:95880244-95880324 36 1.20e-05 ttctaggatc tgctgact cagcagtgaa chr2:206687488-206687568 44 1.20e-05 GCCTCCAAAA TGCTGACT CAGCATAGCA chr1:84383798-84383878 38 1.20e-05 TGTGAGTATT TGCTGACT GGGCACTATT chr10:84200646-84200726 43 1.20e-05 GTAAATTGTT TGCTGACT CAGCTTAAAT chr6:119982390-119982470 38 1.20e-05 CCTTGAAAAC TGCTGACT GATGCAAAAA chr9:130950606-130950686 44 1.20e-05 gagacaaaaa tgctgact ggtggttttc chr6:64321618-64321698 37 1.20e-05 AACACAATTT TGCTGACT TAACATTTTT chr14:70828760-70828840 43 1.20e-05 ACAGTTAAAA TGCTGACT CAGCTATCTT chr4:133680512-133680592 41 1.20e-05 ATCAAGAAAT TGCTGACT CAACAATATT chr12:100605636-10060571 32 1.20e-05 tggtactgTG TGCTGACT CAGCAATACT chr11:90584528-90584608 25 1.20e-05 ataatttttc tgctgact cagcacttgg chr4:66700593-66700673 24 1.20e-05 aaggtatttt tgctgact tgacagtttt chr11:85515116-85515196 42 1.20e-05 tatactaagt tgctgact catcactttg chr4:142165730-142165810 38 1.20e-05 TTCTGTATAT TGCTGACT CAGCTTATTC chr1:26049941-26050021 31 2.39e-05 ttcttggctt tgctgagt cagcactcca chr1:91590873-91590953 37 2.39e-05 taacctggat tgctgagt cagcacatgg chr22:31011826-31011906 39 2.39e-05 CATCCTGATT TGCTGAGT CAGCACAAGA chrX:34650699-34650779 27 2.39e-05 AGCACAACAC TGCTGAGT CAGCACTTTG chr5:37226637-37226717 36 2.39e-05 ACCCTTTTGT TGCTGAGT CAGCAAAAGT chr16:66492023-66492103 39 2.39e-05 AGCCTGAAGG TGCTGAGT CAGCACTTTT chr5:76912905-76912985 27 2.39e-05 TAGCCTAGAA TGCTGAGT cagcactgtc chr12:133115360-13311544 30 2.39e-05 AAACTGAATT TGCTGAGT AAGCAAATAT chr6:130012535-130012615 41 2.39e-05 TTTAACATTT TGCTGAGT AAGCAGTTTT chr8:93738691-93738771 25 2.39e-05 ACATAAAATT TGCTGAGT AATCAAATAA chr1:248229081-248229161 25 2.39e-05 tccacaaata tgctgagt cagcatgttt chr11:71682886-71682966 27 2.39e-05 agcatggcat tgctgagt cagcgaatat chr18:55665232-55665312 38 2.39e-05 TGTAGCACTT TGCTGAGT CAGCATCTGC chr6:89080014-89080094 24 2.39e-05 GGGGAGTTAT TGCTGAGT CAGCACTGCT chr1:174397295-174397375 27 2.39e-05 GGGACAGAAA TGCTGAGT CAACAGAAAC chr12:6242942-6243022 33 2.39e-05 gcagctttat tgctgagt cagcaagact chr8:125489960-125490040 40 2.39e-05 AGCAGCATAA TGCTGAGT TAGCAAATTT chr20:44963246-44963326 25 2.39e-05 AATTAAGGTT TGCTGAGT CAGCACCTTT chr12:46260240-46260320 40 2.39e-05 aattgggaat tgctgagt caggggattt chr2:45398407-45398487 30 2.39e-05 AGAAACCATG TGCTGAGT CAGCAAAAAC chr4:69106493-69106573 43 2.39e-05 GTGTAATTTT TGCTGAGT CAGCCAAAAT chr1:233041237-233041317 25 2.39e-05 caCTCAGACC TGCTGAGT CAGCATCTTC chr1:212141214-212141294 26 2.39e-05 TCCTCAAAGT TGCTGAGT CAGCATCAAA chr3:173817670-173817750 36 2.39e-05 TGATGTGTTT TGCTGAGT CAGGGATTTC chr8:90143329-90143409 33 2.39e-05 ttaggatgaa tgctgagt cagcagatat chr11:61418719-61418799 26 2.39e-05 ACCTGAGACC TGCTGAGT CAGCAGATTT chr3:167776426-167776506 40 2.39e-05 CATAATGAAC TGCTGAGT CAGCAGATTC chr20:21374003-21374083 40 2.39e-05 AGGTCACATC TGCTGAGT AAGCATTTTT chr18:14122262-14122342 26 2.39e-05 CTGATAAAAT TGCTGAGT AAGGATTTTT chr6:12369748-12369828 32 2.39e-05 TTGTTCATTC TGCTGAGT CAGCAGTGTG chr16:6172606-6172686 42 2.39e-05 GTGGCCAATG TGCTGAGT CAGCACCCTG chr3:162650447-162650527 36 2.39e-05 GATGCCAATT TGCTGAGT CAGCCAAATT chrX:141637863-141637943 42 2.39e-05 ACCCCAGCTT TGCTGAGT CAGCAAAATT chr14:89809850-89809930 32 2.39e-05 TAATAGAACT TGCTGAGT CAGCACTAAA chr13:49745654-49745734 33 2.39e-05 AATAACAGAT TGCTGAGT CAGCAGTCTC chrX:65452304-65452384 26 4.38e-05 TGCTTCAGAA TGCTGACA TAAGCAATTT chr1:179414888-179414968 42 4.38e-05 ttatgaatat tgctgaca tagacattta chr1:235080342-235080422 34 4.38e-05 GTGAATAAAA TGCTGACA TCAGCACCAT chr13:106356356-10635643 27 4.38e-05 AAACACTTTC TGCTGACG CAGCATTTCT chr4:113168335-113168415 36 4.38e-05 GGGGAAAAAT TGCTGACA TTGCATCTTT chr4:138590197-138590277 30 4.38e-05 ATAATAAAAC TGCTGACA CATCATTATT chr8:111929200-111929280 35 4.38e-05 ATGAACATTA TGCTGACA TTGCATTTCT chr13:97902507-97902587 31 4.38e-05 ctattttatt tgctgaca gtgcacttta chr11:13034846-13034926 26 4.38e-05 TTTGATGGGC TGCTGACG TCAGCAAATA chr1:234430345-234430425 40 4.38e-05 AGTATAAATG TGCTGACG TTGGCAAAAT chr2:182262889-182262969 26 4.38e-05 ATTATAGAAA TGCTGACA CAGCAAAACA chr7:153532275-153532355 44 4.38e-05 ATGTGATTAA TGCTGACG TGGCTTTTAA chr19:6963615-6963695 41 4.38e-05 GTCCAACTAT TGCTGACA CAGCAATAAT chr7:143631950-143632030 26 4.38e-05 tcttcctttt tgctgaca tcaTCAGAAA chr7:117823068-117823148 36 4.38e-05 CGAGGAAAAC TGCTGACA TTGCAAGAGT chr7:119951243-119951323 38 4.38e-05 TAAGGATTTT TGCTGACA TAAGCAGAAT chr8:10314777-10314857 42 4.38e-05 gaagaaaatt tgctgacg tcatcactaa chr13:22830403-22830483 40 4.38e-05 ATTTAAGTAA TGCTGACA CAGCAAAATC chr4:74719956-74720036 26 4.38e-05 GCAAAAATAA TGCTGACA CATCACAATT chr6:135518360-135518440 35 4.38e-05 CCTTCATATT TGCTGACG TCAGCAGTTC chr8:111931440-111931520 44 4.38e-05 ATCTGAGAAG TGCTGACA GTGCATAAAT chr4:126611169-126611249 40 4.38e-05 ATTCAAAAAC TGCTGACA TGACATTTAT chr2:89888694-89888774 39 4.38e-05 GATCAGAATT TGCTGACA TCATCAGAAA chr7:143145672-143145752 42 4.38e-05 tctcatatat tgctgaca tcagcataaa chr12:40149433-40149513 40 4.38e-05 TTCTCATTTA TGCTGACA TGACAAAATC chr17:53314696-53314776 58 6.35e-05 AAGTATTTGT TGCTGAGA GCCTCTTGGT chr8:59785223-59785303 39 6.35e-05 gtctcaaaat tgctgagg tcatcaaaaa chr10:30049215-30049295 36 6.35e-05 AACTCCTTTG TGCTGAGG TCAGCATTTT chr14:22456348-22456428 35 1.14e-04 GTTCTGAGAT AGCTGACT CAGCGAAAAA chr1:215663669-215663749 32 1.14e-04 TGGGAAAAAA TGATGACT AGACAATATT chr20:45192603-45192683 36 1.14e-04 cacccagaat tgctgatt cagcaagtct chr1:33401786-33401866 31 1.14e-04 TTCCCTATTC AGCTGACT CAGCTAATAA chr5:176673725-176673805 39 1.14e-04 AAGTGAAAAA TGATGACT CGTCAAAAGA chrX:43696185-43696265 32 1.14e-04 TTCCTGTAAT TGATGACT CAGCAATTTC chr9:75454289-75454369 44 1.14e-04 GGACTGATTT TGATGACT CAGCAGTTAT chr8:124821630-124821710 37 1.14e-04 GGTGGAATTA TGATGACT TTGCAAAATT chr10:115992695-11599277 33 1.14e-04 TAATATTATT TGCTGATT CAGCTAATTT chr18:19410649-19410729 37 1.14e-04 TCACTCTATT TGCTGATT CAGCATTTCT chr6:149523366-149523446 42 1.14e-04 AGTTCTAAAC AGCTGACT CATCATTAAG chr18:3723313-3723393 40 1.14e-04 TGCTAATATT TGATGACT CAGCTTGTTT chr1:224590502-224590582 30 1.14e-04 attgattaaa tgctgatt tgacaaaaat chr16:17779464-17779544 35 1.14e-04 aaaaactttt tgctgatt cagcaaagaa chr5:161029906-161029986 28 1.14e-04 AATATGAAAG TGCTGATT CAGCAAATGT chr3:50555398-50555478 45 1.14e-04 ATGACAGAAG TGCTGATT CAGCAAAAAC chr10:33690387-33690467 34 1.14e-04 AAATCATAAC TGCTGATT CAGCATTTCT chr8:133982638-133982718 30 1.33e-04 atttcaaacc tgctgaat cagcatttcc chr6:140330562-140330642 33 1.33e-04 tgtaaatatt tgctgaat aaGCATTTAA chr7:156466761-156466841 29 1.33e-04 CAGATGTAAC TGCTGAAT CGGCACTTCT chr11:111666214-11166629 34 1.33e-04 ACACAGAATT TGCTGAAT CAGCATTATC chr6:157285339-157285419 44 1.33e-04 ATACCACATA TGCTGAAT CAGCTCTTTT chr10:60216103-60216183 30 1.33e-04 tccctaaaaa tgctgaat cagcaggtct chr9:78189655-78189735 29 1.33e-04 aataaatatt tgctgaat CAGCAAAAAG chr17:32313255-32313335 40 1.33e-04 tctaaatatt tgctgaat CAGCAATTGG chr18:30052970-30053050 29 1.41e-04 GATCTGTTAT TGCTGACC TTGCAGAAAA chr12:86623716-86623796 27 1.41e-04 CCTCAAATTC TGCTGACC TTGCAAATTC chr1:93796332-93796412 33 1.41e-04 tcaggtatat tgctgacc taagcggatt chr20:42360223-42360303 24 1.72e-04 TGTCCTGGTT AGCTGAGT CAGCAATTAT chr3:182587015-182587095 26 1.72e-04 TTGCTAAAGG AGCTGAGT CATCAATTCT chr16:83667046-83667126 37 1.72e-04 CTTTCCAGTT AGCTGAGT CAGCACAAAA chr14:66619157-66619237 28 1.72e-04 ATCCTGGAAC TGATGAGT CAGCACTTTC chr2:178737197-178737277 27 1.72e-04 TAAGCAGAAG TGATGAGT CAGCAAAACT chr8:138472385-138472465 25 1.72e-04 TGTGCACATT TGATGAGT CAGCAAAATC chr5:52769632-52769712 36 1.72e-04 CCAGAGATTT TGATGAGT CAGCACACCA chr2:20191819-20191899 26 1.72e-04 TAGACAAAAT TGATGAGT CATCAAAAAT chr5:82968144-82968224 28 1.72e-04 TTACAGAAAC AGCTGAGT CAGCAGCTTG chr5:108804078-108804158 33 1.72e-04 atgtgtaaaa tgatgagt cagcaaagtt chr2:200568074-200568154 38 1.72e-04 tccaagattt tgatgagt cagcatgaaa chr20:45481105-45481185 33 1.72e-04 TCTGTAAAAG TGATGAGT CAGCTGTTCA chr17:47116059-47116139 41 1.72e-04 AACCTCATTT TGATGAGT CAGCAACTCA chrX:37976108-37976188 43 1.72e-04 CTAATTAAAC TGATGAGT CAGCAGTTAA chr6:157871327-157871407 41 1.80e-04 CCATGAAATA TGCTGAGC TAAGCATTAA chr18:12517294-12517374 42 2.11e-04 CAAATCAAAA TCCTGACT CAGCAATAAA chr1:26020715-26020795 40 2.30e-04 gtagcagttc tgcttagt cagcagatct chr8:100721499-100721579 30 2.30e-04 GATTGCATTT TGCTTAGT CAGCATGTAG chr4:138551564-138551644 35 2.30e-04 agaaatatat tgcttagt catcaatttt chr11:120952184-12095226 39 2.30e-04 TTTCAGAGAA TGCTTAGT CAGCAGAAAC chr6:25898655-25898735 27 2.57e-04 gtacagaaaa cgctgact caacaaattt chr1:93400098-93400178 37 2.57e-04 CAAATGTATT TCCTGAGT CAGCATATAC chr4:7019536-7019616 34 2.57e-04 ATGACTTATT TCCTGAGT CAGCATTTAT chr2:51459326-51459406 27 3.41e-04 GCCAAATTAA AGCTGACA CAGCAAAATC chr1:10254703-10254783 28 3.41e-04 AGAAAGAAAT TGCTGATG TCATCGCTTT chr7:25002951-25003031 38 3.41e-04 AGCTGCAAAA TGCTGATG TCAGCAGTGC chr15:37345401-37345481 30 3.41e-04 AACCTTAATA TGCTGATA CAGCAAATTT chr15:65285794-65285874 29 3.41e-04 CTTAGAAAAA TGCTGATG TGGCTATTTT chr8:8745326-8745406 22 3.41e-04 AAACATAAAG AGCTGACG TTAGCaaaaa chr20:51100087-51100167 31 3.41e-04 AATGTGAAAC TGCTGATA CAGCATTTTT chr3:150565376-150565456 37 3.41e-04 tcattcaaat tgctgatg tcagcaattt chr8:88943644-88943724 36 4.07e-04 AACTTGACAC TGCCGAGT CAGCAGTTTT chr7:27694955-27695035 19 4.07e-04 cttagattca tgctgaag cattagggtt chr3:4305862-4305942 45 4.07e-04 AACCCAGTTA CGCTGAGT CAGCATCTTT chr12:94057621-94057701 32 4.07e-04 TATAGTGTTT TGCCGAGT CAGCGGTAAT chr6:44886795-44886875 26 4.26e-04 GTACAAAAAG TGCTAACT CATCATTTCA chr1:61917046-61917126 62 4.86e-04 TTTTCCAACC TGATGAGA TTACTTCTTC chr12:5618458-5618538 45 5.04e-04 tctgatttta tgttgagt cagcaaaaaa chr8:121920828-121920908 7 5.04e-04 aatatt tgttgagt tgactaaatA chr3:142974727-142974807 68 5.74e-04 GCCATCTGCT AGATGACT AGATA chr10:77196825-77196905 73 5.74e-04 GAAGGTTGAG AGATGACT chr6:101287437-101287517 46 5.74e-04 acaacaaaag tgatgatt cagcatgttc chr16:63091397-63091477 43 5.93e-04 CCTCTGTTTT TGCTAAGT CAGCATTAAT chr9:6473309-6473389 39 5.93e-04 tttttaaaac tgctaagt cagcatttta chr2:72753903-72753983 28 6.63e-04 GCAAACTAAA AGCTGAAT AAAATTTGCT chr3:120460336-120460416 64 6.63e-04 TACTAAGGAG AGCTGAAT TGGGGATTA chr2:208221487-208221567 33 6.63e-04 CAAACAGAAT TGCTGTCT CAGCACATTT chr7:39444662-39444742 41 6.63e-04 TTAAAAAATG TGCTGGGT CAGCAGAATT chr8:65481399-65481479 30 6.63e-04 AAAAGAAAAA AGCTGAAT CAGCATTTTT chr9:102858953-102859033 39 7.27e-04 AAGGAAAAAA TGATGACC TCAGCTAAAT chr5:89841492-89841572 29 7.27e-04 GCTGTCACTT TGCTTACG TCAGCATTTT chr2:191847137-191847217 61 8.61e-04 CACTTCTGAA AGCTGAGC CCATCGTGCA chr18:22988424-22988504 26 8.61e-04 tttccaaaac tgcttagg tcagcacctt chr15:26346755-26346835 28 8.61e-04 tttctaaaat tgcttagg tcagcacttt chr1:119420453-119420533 30 9.86e-04 ACTTGAGAAA AGCTTACT CAGCATTTTA chr8:118125061-118125141 68 9.86e-04 CATTGACTGT TGATTACT TCATT chr20:30515713-30515793 5 1.06e-03 ACCT TTCTGAGT ATTTTTTGCA chr5:163759751-163759831 3 1.12e-03 GA TGTTGACA AATTGGCTCT chr14:52813661-52813741 24 1.36e-03 atacgaaata tcatgagt cagcaaattt chr6:67374174-67374254 46 1.36e-03 AGCAAAATTT TCATGAGT AAATGACGAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:15407876-15407956 1.2e-05 35_[+1]_37 chr11:85884153-85884233 1.2e-05 28_[+1]_44 chrX:150123582-150123662 1.2e-05 34_[+1]_38 chr2:189472393-189472473 1.2e-05 35_[+1]_37 chr6:26427792-26427872 1.2e-05 35_[+1]_37 chr2:41641406-41641486 1.2e-05 44_[+1]_28 chr16:55034702-55034782 1.2e-05 36_[+1]_36 chr10:62548469-62548549 1.2e-05 26_[+1]_46 chr12:90369507-90369587 1.2e-05 41_[+1]_31 chr8:17798196-17798276 1.2e-05 28_[+1]_44 chr2:176311088-176311168 1.2e-05 33_[+1]_39 chr12:42100334-42100414 1.2e-05 45_[+1]_27 chr20:33332310-33332390 1.2e-05 28_[+1]_44 chr16:48993814-48993894 1.2e-05 36_[+1]_36 chr1:41319438-41319518 1.2e-05 23_[+1]_49 chr12:121258847-12125892 1.2e-05 28_[+1]_44 chr15:94314809-94314889 1.2e-05 35_[+1]_37 chr16:71837362-71837442 1.2e-05 26_[+1]_46 chr18:11661565-11661645 1.2e-05 32_[+1]_40 chr19:40576120-40576200 1.2e-05 31_[+1]_41 chr5:105657111-105657191 1.2e-05 38_[+1]_34 chr1:228588462-228588542 1.2e-05 32_[+1]_40 chr16:71662822-71662902 1.2e-05 36_[+1]_36 chr10:30060478-30060558 1.2e-05 43_[+1]_29 chr12:114271415-11427149 1.2e-05 36_[+1]_36 chr18:9289844-9289924 1.2e-05 42_[+1]_30 chr3:64367176-64367256 1.2e-05 27_[+1]_45 chr5:94714990-94715070 1.2e-05 40_[+1]_32 chr16:79098297-79098377 1.2e-05 36_[+1]_36 chr4:77874502-77874582 1.2e-05 26_[+1]_46 chr10:22215452-22215532 1.2e-05 25_[+1]_47 chr6:32335573-32335653 1.2e-05 29_[+1]_43 chr2:75718710-75718790 1.2e-05 29_[+1]_43 chr16:48718219-48718299 1.2e-05 29_[+1]_43 chr10:59063487-59063567 1.2e-05 26_[+1]_46 chr2:79820748-79820828 1.2e-05 38_[+1]_34 chrX:27750231-27750311 1.2e-05 40_[+1]_32 chr5:80150558-80150638 1.2e-05 34_[+1]_38 chr1:216940462-216940542 1.2e-05 39_[+1]_33 chr2:31278977-31279057 1.2e-05 26_[+1]_46 chr12:75803751-75803831 1.2e-05 25_[+1]_47 chr13:99544477-99544557 1.2e-05 25_[+1]_47 chr4:130975132-130975212 1.2e-05 26_[+1]_46 chr20:51056036-51056116 1.2e-05 37_[+1]_35 chr5:9186345-9186425 1.2e-05 28_[+1]_44 chr3:189294427-189294507 1.2e-05 40_[+1]_32 chr11:83493526-83493606 1.2e-05 32_[+1]_40 chrX:28688361-28688441 1.2e-05 25_[+1]_47 chr7:95880244-95880324 1.2e-05 35_[+1]_37 chr2:206687488-206687568 1.2e-05 43_[+1]_29 chr1:84383798-84383878 1.2e-05 37_[+1]_35 chr10:84200646-84200726 1.2e-05 42_[+1]_30 chr6:119982390-119982470 1.2e-05 37_[+1]_35 chr9:130950606-130950686 1.2e-05 43_[+1]_29 chr6:64321618-64321698 1.2e-05 36_[+1]_36 chr14:70828760-70828840 1.2e-05 42_[+1]_30 chr4:133680512-133680592 1.2e-05 40_[+1]_32 chr12:100605636-10060571 1.2e-05 31_[+1]_41 chr11:90584528-90584608 1.2e-05 24_[+1]_48 chr4:66700593-66700673 1.2e-05 23_[+1]_49 chr11:85515116-85515196 1.2e-05 41_[+1]_31 chr4:142165730-142165810 1.2e-05 37_[+1]_35 chr1:26049941-26050021 2.4e-05 30_[+1]_42 chr1:91590873-91590953 2.4e-05 36_[+1]_36 chr22:31011826-31011906 2.4e-05 38_[+1]_34 chrX:34650699-34650779 2.4e-05 26_[+1]_46 chr5:37226637-37226717 2.4e-05 35_[+1]_37 chr16:66492023-66492103 2.4e-05 38_[+1]_34 chr5:76912905-76912985 2.4e-05 26_[+1]_46 chr12:133115360-13311544 2.4e-05 29_[+1]_43 chr6:130012535-130012615 2.4e-05 40_[+1]_32 chr8:93738691-93738771 2.4e-05 24_[+1]_48 chr1:248229081-248229161 2.4e-05 24_[+1]_48 chr11:71682886-71682966 2.4e-05 26_[+1]_46 chr18:55665232-55665312 2.4e-05 37_[+1]_35 chr6:89080014-89080094 2.4e-05 23_[+1]_49 chr1:174397295-174397375 2.4e-05 26_[+1]_46 chr12:6242942-6243022 2.4e-05 32_[+1]_40 chr8:125489960-125490040 2.4e-05 39_[+1]_33 chr20:44963246-44963326 2.4e-05 24_[+1]_48 chr12:46260240-46260320 2.4e-05 39_[+1]_33 chr2:45398407-45398487 2.4e-05 29_[+1]_43 chr4:69106493-69106573 2.4e-05 42_[+1]_30 chr1:233041237-233041317 2.4e-05 24_[+1]_48 chr1:212141214-212141294 2.4e-05 25_[+1]_47 chr3:173817670-173817750 2.4e-05 35_[+1]_37 chr8:90143329-90143409 2.4e-05 32_[+1]_40 chr11:61418719-61418799 2.4e-05 25_[+1]_47 chr3:167776426-167776506 2.4e-05 39_[+1]_33 chr20:21374003-21374083 2.4e-05 39_[+1]_33 chr18:14122262-14122342 2.4e-05 25_[+1]_47 chr6:12369748-12369828 2.4e-05 31_[+1]_41 chr16:6172606-6172686 2.4e-05 41_[+1]_31 chr3:162650447-162650527 2.4e-05 35_[+1]_37 chrX:141637863-141637943 2.4e-05 41_[+1]_31 chr14:89809850-89809930 2.4e-05 31_[+1]_41 chr13:49745654-49745734 2.4e-05 32_[+1]_40 chrX:65452304-65452384 4.4e-05 25_[+1]_47 chr1:179414888-179414968 4.4e-05 41_[+1]_31 chr1:235080342-235080422 4.4e-05 33_[+1]_39 chr13:106356356-10635643 4.4e-05 26_[+1]_46 chr4:113168335-113168415 4.4e-05 35_[+1]_37 chr4:138590197-138590277 4.4e-05 29_[+1]_43 chr8:111929200-111929280 4.4e-05 34_[+1]_38 chr13:97902507-97902587 4.4e-05 30_[+1]_42 chr11:13034846-13034926 4.4e-05 25_[+1]_47 chr1:234430345-234430425 4.4e-05 39_[+1]_33 chr2:182262889-182262969 4.4e-05 25_[+1]_47 chr7:153532275-153532355 4.4e-05 43_[+1]_29 chr19:6963615-6963695 4.4e-05 40_[+1]_32 chr7:143631950-143632030 4.4e-05 25_[+1]_47 chr7:117823068-117823148 4.4e-05 35_[+1]_37 chr7:119951243-119951323 4.4e-05 37_[+1]_35 chr8:10314777-10314857 4.4e-05 41_[+1]_31 chr13:22830403-22830483 4.4e-05 39_[+1]_33 chr4:74719956-74720036 4.4e-05 25_[+1]_47 chr6:135518360-135518440 4.4e-05 34_[+1]_38 chr8:111931440-111931520 4.4e-05 43_[+1]_29 chr4:126611169-126611249 4.4e-05 39_[+1]_33 chr2:89888694-89888774 4.4e-05 38_[+1]_34 chr7:143145672-143145752 4.4e-05 41_[+1]_31 chr12:40149433-40149513 4.4e-05 39_[+1]_33 chr17:53314696-53314776 6.4e-05 57_[+1]_15 chr8:59785223-59785303 6.4e-05 38_[+1]_34 chr10:30049215-30049295 6.4e-05 35_[+1]_37 chr14:22456348-22456428 0.00011 34_[+1]_38 chr1:215663669-215663749 0.00011 31_[+1]_41 chr20:45192603-45192683 0.00011 35_[+1]_37 chr1:33401786-33401866 0.00011 30_[+1]_42 chr5:176673725-176673805 0.00011 38_[+1]_34 chrX:43696185-43696265 0.00011 31_[+1]_41 chr9:75454289-75454369 0.00011 43_[+1]_29 chr8:124821630-124821710 0.00011 36_[+1]_36 chr10:115992695-11599277 0.00011 32_[+1]_40 chr18:19410649-19410729 0.00011 36_[+1]_36 chr6:149523366-149523446 0.00011 41_[+1]_31 chr18:3723313-3723393 0.00011 39_[+1]_33 chr1:224590502-224590582 0.00011 29_[+1]_43 chr16:17779464-17779544 0.00011 34_[+1]_38 chr5:161029906-161029986 0.00011 27_[+1]_45 chr3:50555398-50555478 0.00011 44_[+1]_28 chr10:33690387-33690467 0.00011 33_[+1]_39 chr8:133982638-133982718 0.00013 29_[+1]_43 chr6:140330562-140330642 0.00013 32_[+1]_40 chr7:156466761-156466841 0.00013 28_[+1]_44 chr11:111666214-11166629 0.00013 33_[+1]_39 chr6:157285339-157285419 0.00013 43_[+1]_29 chr10:60216103-60216183 0.00013 29_[+1]_43 chr9:78189655-78189735 0.00013 28_[+1]_44 chr17:32313255-32313335 0.00013 39_[+1]_33 chr18:30052970-30053050 0.00014 28_[+1]_44 chr12:86623716-86623796 0.00014 26_[+1]_46 chr1:93796332-93796412 0.00014 32_[+1]_40 chr20:42360223-42360303 0.00017 23_[+1]_49 chr3:182587015-182587095 0.00017 25_[+1]_47 chr16:83667046-83667126 0.00017 36_[+1]_36 chr14:66619157-66619237 0.00017 27_[+1]_45 chr2:178737197-178737277 0.00017 26_[+1]_46 chr8:138472385-138472465 0.00017 24_[+1]_48 chr5:52769632-52769712 0.00017 35_[+1]_37 chr2:20191819-20191899 0.00017 25_[+1]_47 chr5:82968144-82968224 0.00017 27_[+1]_45 chr5:108804078-108804158 0.00017 32_[+1]_40 chr2:200568074-200568154 0.00017 37_[+1]_35 chr20:45481105-45481185 0.00017 32_[+1]_40 chr17:47116059-47116139 0.00017 40_[+1]_32 chrX:37976108-37976188 0.00017 42_[+1]_30 chr6:157871327-157871407 0.00018 40_[+1]_32 chr18:12517294-12517374 0.00021 41_[+1]_31 chr1:26020715-26020795 0.00023 39_[+1]_33 chr8:100721499-100721579 0.00023 29_[+1]_43 chr4:138551564-138551644 0.00023 34_[+1]_38 chr11:120952184-12095226 0.00023 38_[+1]_34 chr6:25898655-25898735 0.00026 26_[+1]_46 chr1:93400098-93400178 0.00026 36_[+1]_36 chr4:7019536-7019616 0.00026 33_[+1]_39 chr2:51459326-51459406 0.00034 26_[+1]_46 chr1:10254703-10254783 0.00034 27_[+1]_45 chr7:25002951-25003031 0.00034 37_[+1]_35 chr15:37345401-37345481 0.00034 29_[+1]_43 chr15:65285794-65285874 0.00034 28_[+1]_44 chr8:8745326-8745406 0.00034 21_[+1]_51 chr20:51100087-51100167 0.00034 30_[+1]_42 chr3:150565376-150565456 0.00034 36_[+1]_36 chr8:88943644-88943724 0.00041 35_[+1]_37 chr7:27694955-27695035 0.00041 18_[+1]_54 chr3:4305862-4305942 0.00041 44_[+1]_28 chr12:94057621-94057701 0.00041 31_[+1]_41 chr6:44886795-44886875 0.00043 25_[+1]_47 chr1:61917046-61917126 0.00049 61_[+1]_11 chr12:5618458-5618538 0.0005 44_[+1]_28 chr8:121920828-121920908 0.0005 6_[+1]_66 chr3:142974727-142974807 0.00057 67_[+1]_5 chr10:77196825-77196905 0.00057 72_[+1] chr6:101287437-101287517 0.00057 45_[+1]_27 chr16:63091397-63091477 0.00059 42_[+1]_30 chr9:6473309-6473389 0.00059 38_[+1]_34 chr2:72753903-72753983 0.00066 27_[+1]_45 chr3:120460336-120460416 0.00066 63_[+1]_9 chr2:208221487-208221567 0.00066 32_[+1]_40 chr7:39444662-39444742 0.00066 40_[+1]_32 chr8:65481399-65481479 0.00066 29_[+1]_43 chr9:102858953-102859033 0.00073 38_[+1]_34 chr5:89841492-89841572 0.00073 28_[+1]_44 chr2:191847137-191847217 0.00086 60_[+1]_12 chr18:22988424-22988504 0.00086 25_[+1]_47 chr15:26346755-26346835 0.00086 27_[+1]_45 chr1:119420453-119420533 0.00099 29_[+1]_43 chr8:118125061-118125141 0.00099 67_[+1]_5 chr20:30515713-30515793 0.0011 4_[+1]_68 chr5:163759751-163759831 0.0011 2_[+1]_70 chr14:52813661-52813741 0.0014 23_[+1]_49 chr6:67374174-67374254 0.0014 45_[+1]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCTGAST width=8 seqs=213 chr10:15407876-15407956 ( 36) TGCTGACT 1 chr11:85884153-85884233 ( 29) TGCTGACT 1 chrX:150123582-150123662 ( 35) TGCTGACT 1 chr2:189472393-189472473 ( 36) TGCTGACT 1 chr6:26427792-26427872 ( 36) TGCTGACT 1 chr2:41641406-41641486 ( 45) TGCTGACT 1 chr16:55034702-55034782 ( 37) TGCTGACT 1 chr10:62548469-62548549 ( 27) TGCTGACT 1 chr12:90369507-90369587 ( 42) TGCTGACT 1 chr8:17798196-17798276 ( 29) TGCTGACT 1 chr2:176311088-176311168 ( 34) TGCTGACT 1 chr12:42100334-42100414 ( 46) TGCTGACT 1 chr20:33332310-33332390 ( 29) TGCTGACT 1 chr16:48993814-48993894 ( 37) TGCTGACT 1 chr1:41319438-41319518 ( 24) TGCTGACT 1 chr12:121258847-12125892 ( 29) TGCTGACT 1 chr15:94314809-94314889 ( 36) TGCTGACT 1 chr16:71837362-71837442 ( 27) TGCTGACT 1 chr18:11661565-11661645 ( 33) TGCTGACT 1 chr19:40576120-40576200 ( 32) TGCTGACT 1 chr5:105657111-105657191 ( 39) TGCTGACT 1 chr1:228588462-228588542 ( 33) TGCTGACT 1 chr16:71662822-71662902 ( 37) TGCTGACT 1 chr10:30060478-30060558 ( 44) TGCTGACT 1 chr12:114271415-11427149 ( 37) TGCTGACT 1 chr18:9289844-9289924 ( 43) TGCTGACT 1 chr3:64367176-64367256 ( 28) TGCTGACT 1 chr5:94714990-94715070 ( 41) TGCTGACT 1 chr16:79098297-79098377 ( 37) TGCTGACT 1 chr4:77874502-77874582 ( 27) TGCTGACT 1 chr10:22215452-22215532 ( 26) TGCTGACT 1 chr6:32335573-32335653 ( 30) TGCTGACT 1 chr2:75718710-75718790 ( 30) TGCTGACT 1 chr16:48718219-48718299 ( 30) TGCTGACT 1 chr10:59063487-59063567 ( 27) TGCTGACT 1 chr2:79820748-79820828 ( 39) TGCTGACT 1 chrX:27750231-27750311 ( 41) TGCTGACT 1 chr5:80150558-80150638 ( 35) TGCTGACT 1 chr1:216940462-216940542 ( 40) TGCTGACT 1 chr2:31278977-31279057 ( 27) TGCTGACT 1 chr12:75803751-75803831 ( 26) TGCTGACT 1 chr13:99544477-99544557 ( 26) TGCTGACT 1 chr4:130975132-130975212 ( 27) TGCTGACT 1 chr20:51056036-51056116 ( 38) TGCTGACT 1 chr5:9186345-9186425 ( 29) TGCTGACT 1 chr3:189294427-189294507 ( 41) TGCTGACT 1 chr11:83493526-83493606 ( 33) TGCTGACT 1 chrX:28688361-28688441 ( 26) TGCTGACT 1 chr7:95880244-95880324 ( 36) TGCTGACT 1 chr2:206687488-206687568 ( 44) TGCTGACT 1 chr1:84383798-84383878 ( 38) TGCTGACT 1 chr10:84200646-84200726 ( 43) TGCTGACT 1 chr6:119982390-119982470 ( 38) TGCTGACT 1 chr9:130950606-130950686 ( 44) TGCTGACT 1 chr6:64321618-64321698 ( 37) TGCTGACT 1 chr14:70828760-70828840 ( 43) TGCTGACT 1 chr4:133680512-133680592 ( 41) TGCTGACT 1 chr12:100605636-10060571 ( 32) TGCTGACT 1 chr11:90584528-90584608 ( 25) TGCTGACT 1 chr4:66700593-66700673 ( 24) TGCTGACT 1 chr11:85515116-85515196 ( 42) TGCTGACT 1 chr4:142165730-142165810 ( 38) TGCTGACT 1 chr1:26049941-26050021 ( 31) TGCTGAGT 1 chr1:91590873-91590953 ( 37) TGCTGAGT 1 chr22:31011826-31011906 ( 39) TGCTGAGT 1 chrX:34650699-34650779 ( 27) TGCTGAGT 1 chr5:37226637-37226717 ( 36) TGCTGAGT 1 chr16:66492023-66492103 ( 39) TGCTGAGT 1 chr5:76912905-76912985 ( 27) TGCTGAGT 1 chr12:133115360-13311544 ( 30) TGCTGAGT 1 chr6:130012535-130012615 ( 41) TGCTGAGT 1 chr8:93738691-93738771 ( 25) TGCTGAGT 1 chr1:248229081-248229161 ( 25) TGCTGAGT 1 chr11:71682886-71682966 ( 27) TGCTGAGT 1 chr18:55665232-55665312 ( 38) TGCTGAGT 1 chr6:89080014-89080094 ( 24) TGCTGAGT 1 chr1:174397295-174397375 ( 27) TGCTGAGT 1 chr12:6242942-6243022 ( 33) TGCTGAGT 1 chr8:125489960-125490040 ( 40) TGCTGAGT 1 chr20:44963246-44963326 ( 25) TGCTGAGT 1 chr12:46260240-46260320 ( 40) TGCTGAGT 1 chr2:45398407-45398487 ( 30) TGCTGAGT 1 chr4:69106493-69106573 ( 43) TGCTGAGT 1 chr1:233041237-233041317 ( 25) TGCTGAGT 1 chr1:212141214-212141294 ( 26) TGCTGAGT 1 chr3:173817670-173817750 ( 36) TGCTGAGT 1 chr8:90143329-90143409 ( 33) TGCTGAGT 1 chr11:61418719-61418799 ( 26) TGCTGAGT 1 chr3:167776426-167776506 ( 40) TGCTGAGT 1 chr20:21374003-21374083 ( 40) TGCTGAGT 1 chr18:14122262-14122342 ( 26) TGCTGAGT 1 chr6:12369748-12369828 ( 32) TGCTGAGT 1 chr16:6172606-6172686 ( 42) TGCTGAGT 1 chr3:162650447-162650527 ( 36) TGCTGAGT 1 chrX:141637863-141637943 ( 42) TGCTGAGT 1 chr14:89809850-89809930 ( 32) TGCTGAGT 1 chr13:49745654-49745734 ( 33) TGCTGAGT 1 chrX:65452304-65452384 ( 26) TGCTGACA 1 chr1:179414888-179414968 ( 42) TGCTGACA 1 chr1:235080342-235080422 ( 34) TGCTGACA 1 chr13:106356356-10635643 ( 27) TGCTGACG 1 chr4:113168335-113168415 ( 36) TGCTGACA 1 chr4:138590197-138590277 ( 30) TGCTGACA 1 chr8:111929200-111929280 ( 35) TGCTGACA 1 chr13:97902507-97902587 ( 31) TGCTGACA 1 chr11:13034846-13034926 ( 26) TGCTGACG 1 chr1:234430345-234430425 ( 40) TGCTGACG 1 chr2:182262889-182262969 ( 26) TGCTGACA 1 chr7:153532275-153532355 ( 44) TGCTGACG 1 chr19:6963615-6963695 ( 41) TGCTGACA 1 chr7:143631950-143632030 ( 26) TGCTGACA 1 chr7:117823068-117823148 ( 36) TGCTGACA 1 chr7:119951243-119951323 ( 38) TGCTGACA 1 chr8:10314777-10314857 ( 42) TGCTGACG 1 chr13:22830403-22830483 ( 40) TGCTGACA 1 chr4:74719956-74720036 ( 26) TGCTGACA 1 chr6:135518360-135518440 ( 35) TGCTGACG 1 chr8:111931440-111931520 ( 44) TGCTGACA 1 chr4:126611169-126611249 ( 40) TGCTGACA 1 chr2:89888694-89888774 ( 39) TGCTGACA 1 chr7:143145672-143145752 ( 42) TGCTGACA 1 chr12:40149433-40149513 ( 40) TGCTGACA 1 chr17:53314696-53314776 ( 58) TGCTGAGA 1 chr8:59785223-59785303 ( 39) TGCTGAGG 1 chr10:30049215-30049295 ( 36) TGCTGAGG 1 chr14:22456348-22456428 ( 35) AGCTGACT 1 chr1:215663669-215663749 ( 32) TGATGACT 1 chr20:45192603-45192683 ( 36) TGCTGATT 1 chr1:33401786-33401866 ( 31) AGCTGACT 1 chr5:176673725-176673805 ( 39) TGATGACT 1 chrX:43696185-43696265 ( 32) TGATGACT 1 chr9:75454289-75454369 ( 44) TGATGACT 1 chr8:124821630-124821710 ( 37) TGATGACT 1 chr10:115992695-11599277 ( 33) TGCTGATT 1 chr18:19410649-19410729 ( 37) TGCTGATT 1 chr6:149523366-149523446 ( 42) AGCTGACT 1 chr18:3723313-3723393 ( 40) TGATGACT 1 chr1:224590502-224590582 ( 30) TGCTGATT 1 chr16:17779464-17779544 ( 35) TGCTGATT 1 chr5:161029906-161029986 ( 28) TGCTGATT 1 chr3:50555398-50555478 ( 45) TGCTGATT 1 chr10:33690387-33690467 ( 34) TGCTGATT 1 chr8:133982638-133982718 ( 30) TGCTGAAT 1 chr6:140330562-140330642 ( 33) TGCTGAAT 1 chr7:156466761-156466841 ( 29) TGCTGAAT 1 chr11:111666214-11166629 ( 34) TGCTGAAT 1 chr6:157285339-157285419 ( 44) TGCTGAAT 1 chr10:60216103-60216183 ( 30) TGCTGAAT 1 chr9:78189655-78189735 ( 29) TGCTGAAT 1 chr17:32313255-32313335 ( 40) TGCTGAAT 1 chr18:30052970-30053050 ( 29) TGCTGACC 1 chr12:86623716-86623796 ( 27) TGCTGACC 1 chr1:93796332-93796412 ( 33) TGCTGACC 1 chr20:42360223-42360303 ( 24) AGCTGAGT 1 chr3:182587015-182587095 ( 26) AGCTGAGT 1 chr16:83667046-83667126 ( 37) AGCTGAGT 1 chr14:66619157-66619237 ( 28) TGATGAGT 1 chr2:178737197-178737277 ( 27) TGATGAGT 1 chr8:138472385-138472465 ( 25) TGATGAGT 1 chr5:52769632-52769712 ( 36) TGATGAGT 1 chr2:20191819-20191899 ( 26) TGATGAGT 1 chr5:82968144-82968224 ( 28) AGCTGAGT 1 chr5:108804078-108804158 ( 33) TGATGAGT 1 chr2:200568074-200568154 ( 38) TGATGAGT 1 chr20:45481105-45481185 ( 33) TGATGAGT 1 chr17:47116059-47116139 ( 41) TGATGAGT 1 chrX:37976108-37976188 ( 43) TGATGAGT 1 chr6:157871327-157871407 ( 41) TGCTGAGC 1 chr18:12517294-12517374 ( 42) TCCTGACT 1 chr1:26020715-26020795 ( 40) TGCTTAGT 1 chr8:100721499-100721579 ( 30) TGCTTAGT 1 chr4:138551564-138551644 ( 35) TGCTTAGT 1 chr11:120952184-12095226 ( 39) TGCTTAGT 1 chr6:25898655-25898735 ( 27) CGCTGACT 1 chr1:93400098-93400178 ( 37) TCCTGAGT 1 chr4:7019536-7019616 ( 34) TCCTGAGT 1 chr2:51459326-51459406 ( 27) AGCTGACA 1 chr1:10254703-10254783 ( 28) TGCTGATG 1 chr7:25002951-25003031 ( 38) TGCTGATG 1 chr15:37345401-37345481 ( 30) TGCTGATA 1 chr15:65285794-65285874 ( 29) TGCTGATG 1 chr8:8745326-8745406 ( 22) AGCTGACG 1 chr20:51100087-51100167 ( 31) TGCTGATA 1 chr3:150565376-150565456 ( 37) TGCTGATG 1 chr8:88943644-88943724 ( 36) TGCCGAGT 1 chr7:27694955-27695035 ( 19) TGCTGAAG 1 chr3:4305862-4305942 ( 45) CGCTGAGT 1 chr12:94057621-94057701 ( 32) TGCCGAGT 1 chr6:44886795-44886875 ( 26) TGCTAACT 1 chr1:61917046-61917126 ( 62) TGATGAGA 1 chr12:5618458-5618538 ( 45) TGTTGAGT 1 chr8:121920828-121920908 ( 7) TGTTGAGT 1 chr3:142974727-142974807 ( 68) AGATGACT 1 chr10:77196825-77196905 ( 73) AGATGACT 1 chr6:101287437-101287517 ( 46) TGATGATT 1 chr16:63091397-63091477 ( 43) TGCTAAGT 1 chr9:6473309-6473389 ( 39) TGCTAAGT 1 chr2:72753903-72753983 ( 28) AGCTGAAT 1 chr3:120460336-120460416 ( 64) AGCTGAAT 1 chr2:208221487-208221567 ( 33) TGCTGTCT 1 chr7:39444662-39444742 ( 41) TGCTGGGT 1 chr8:65481399-65481479 ( 30) AGCTGAAT 1 chr9:102858953-102859033 ( 39) TGATGACC 1 chr5:89841492-89841572 ( 29) TGCTTACG 1 chr2:191847137-191847217 ( 61) AGCTGAGC 1 chr18:22988424-22988504 ( 26) TGCTTAGG 1 chr15:26346755-26346835 ( 28) TGCTTAGG 1 chr1:119420453-119420533 ( 30) AGCTTACT 1 chr8:118125061-118125141 ( 68) TGATTACT 1 chr20:30515713-30515793 ( 5) TTCTGAGT 1 chr5:163759751-163759831 ( 3) TGTTGACA 1 chr14:52813661-52813741 ( 24) TCATGAGT 1 chr6:67374174-67374254 ( 46) TCATGAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.59666 E= 5.8e-289 -205 -436 -1438 159 -1438 -304 234 -601 -147 218 -1438 -443 -1438 -436 -1438 171 -446 -1438 230 -285 167 -1438 -535 -601 -247 145 85 -211 -141 -277 -127 135 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 213 E= 5.8e-289 0.075117 0.009390 0.000000 0.915493 0.000000 0.023474 0.971831 0.004695 0.112676 0.873239 0.000000 0.014085 0.000000 0.009390 0.000000 0.990610 0.014085 0.000000 0.943662 0.042254 0.990610 0.000000 0.004695 0.004695 0.056338 0.525822 0.347418 0.070423 0.117371 0.028169 0.079812 0.774648 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCTGAST MEME-1 regular expression -------------------------------------------------------------------------------- TGCTGA[CG]T -------------------------------------------------------------------------------- Time 4.78 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCANWW MEME-2 width = 8 sites = 223 llr = 1442 E-value = 7.0e-150 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 Description -------------------------------------------------------------------------------- Simplified A :a1:9343 pos.-specific C a::a:21: probability G ::9::211 matrix T ::1:1356 bits 2.4 * 2.1 * * 1.9 * * 1.7 ** * Relative 1.4 **** Entropy 1.2 ***** (9.3 bits) 1.0 ***** 0.7 ***** 0.5 ***** 0.2 ***** ** 0.0 -------- Multilevel CAGCAATT consensus TAA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:42360223-42360303 32 5.16e-05 TTAGCTGAGT CAGCAATT ATCATTATGG chr8:133982638-133982718 38 5.16e-05 cctgctgaat cagcattt cctgggatgg chr8:88943644-88943724 44 5.16e-05 ACTGCCGAGT CAGCAGTT TTCACCTTCC chr2:189472393-189472473 44 5.16e-05 catgctgact cagcagtt ctgcttggca chr13:106356356-10635643 35 5.16e-05 TCTGCTGACG CAGCATTT CTTTAAAGCA chr16:48993814-48993894 45 5.16e-05 TCTGCTGACT CAGCATTT ATGAACAGTA chr2:169375415-169375495 43 5.16e-05 TTTGCACAGT cagcagtt cccaacctgg chr7:27694955-27695035 49 5.16e-05 agtgtcatgt cagcaatt tactttcaaa chr10:77196825-77196905 37 5.16e-05 ATTGCATTGT CAGCAGTT TGTCCTCATT chrX:43696185-43696265 40 5.16e-05 ATTGATGACT CAGCAATT TCTCTCAGAC chr9:75454289-75454369 52 5.16e-05 TTTGATGACT CAGCAGTT ATGAATAATG chr1:228588462-228588542 41 5.16e-05 GCTGCTGACT CAGCATTT CACAGGCAAC chr6:68618435-68618515 42 5.16e-05 tatgcatagt cagcattt atgaagtttt chr9:6473309-6473389 47 5.16e-05 actgctaagt cagcattt tatctttgtt chr18:19410649-19410729 45 5.16e-05 TTTGCTGATT CAGCATTT CTTTTCATGA chr5:126167029-126167109 47 5.16e-05 TGTGCCAAGT CAGCATTT TCCACAGGAA chr2:72753903-72753983 50 5.16e-05 TTTGCTTCAT CAGCAAtt tttattcaga chr3:120460336-120460416 38 5.16e-05 AATGCAAGGT CAGCATTT ATTGAAGTTA chr4:7019536-7019616 42 5.16e-05 TTTCCTGAGT CAGCATTT ATTGGTGGTC chr6:122467040-122467120 51 5.16e-05 AACACTGAGT CAGCATTT CTTCACCCTG chr5:89841492-89841572 38 5.16e-05 TTGCTTACGT CAGCATTT TGTAGAAGGG chr1:119420453-119420533 38 5.16e-05 AAAGCTTACT CAGCATTT TATAAATCCT chr6:135518360-135518440 44 5.16e-05 TTGCTGACGT CAGCAGTT CAACTCCCAA chr2:67749420-67749500 46 5.16e-05 TCTGCCTACT CAGCATTT TCTTCCAGTT chr4:80855969-80856049 51 5.16e-05 ACTGTCTACT CAGCAGTT CTTTCATGAA chr8:65481399-65481479 38 5.16e-05 AAAGCTGAAT CAGCATTT TTAACTAGAA chr20:51100087-51100167 39 5.16e-05 ACTGCTGATA CAGCATTT TTAATTAAAG chr17:32313255-32313335 48 5.16e-05 tttgctgaat CAGCAATT GGGCAGATGT chrX:37976108-37976188 51 5.16e-05 ACTGATGAGT CAGCAGTT AACTAAGTGT chr16:17779464-17779544 17 5.16e-05 gacatttttt cagcattt aaaaactttt chr10:30049215-30049295 45 5.16e-05 GTGCTGAGGT CAGCATTT TCCTGAGTGT chr2:190896865-190896945 35 5.16e-05 AGTGCACACT CAGCATTT TCTAATTTAT chr10:33690387-33690467 42 5.16e-05 ACTGCTGATT CAGCATTT CTACAAAATG chr3:150565376-150565456 46 5.16e-05 ttgctgatgt cagcaatt tcagtactgg chr5:163759751-163759831 36 1.17e-04 ATAGCCCTGT CAGCAAAT TTACCTTCAA chr14:66619157-66619237 36 1.17e-04 ACTGATGAGT CAGCACTT TCCAATCACT chr2:176109583-176109663 43 1.17e-04 AGTGCAATGT CAGCATAT GAGTTCATAT chr10:45299422-45299502 39 1.17e-04 GTGCTGTGCT CAGCACTT TTTGGATGGG chr1:26020715-26020795 48 1.17e-04 tctgcttagt cagcagat ctgatgttca chr12:90369507-90369587 50 1.17e-04 TTTGCTGACT CAGCAAAT ATTCATCCTT chrX:34650699-34650779 35 1.17e-04 ACTGCTGAGT CAGCACTT TGCCTACCAT chr1:61917046-61917126 46 1.17e-04 AATCCTTAGT CAGCACTT TTCCAACCTG chr16:66492023-66492103 47 1.17e-04 GGTGCTGAGT CAGCACTT TTGCGTCTCT chr7:92478720-92478800 34 1.17e-04 AATGCCATCT CAGCACTT TTAACCCATG chr12:96409000-96409080 44 1.17e-04 AATGCCTGGT CAGCAAAT TTGGCTTTCA chr3:142974727-142974807 39 1.17e-04 TCTGCTTAAT CAGCATAT TCTGAACACT chr5:105657111-105657191 13 1.17e-04 TCCAACTTCC CAGCAGAT GAGGAGGAAG chr11:13034846-13034926 35 1.17e-04 CTGCTGACGT CAGCAAAT ATGCTTGACG chr20:30515713-30515793 50 1.17e-04 TTGCCAACGT CAGCACTT CCAGTACGTT chr5:42555373-42555453 41 1.17e-04 ACTGCCATGT CAGCACTT ATGAATTATC chr15:37345401-37345481 38 1.17e-04 TATGCTGATA CAGCAAAT TTCCGGATCT chr4:15304686-15304766 51 1.17e-04 TTTGCCATGT CAGCAAAT CTTCCTAAGA chr7:78399756-78399836 42 1.17e-04 AATGCCAAGT CAGCAGAT ATCTGCTGTT chr1:93400098-93400178 45 1.17e-04 TTTCCTGAGT CAGCATAT ACTGGAAGGT chr2:191847137-191847217 48 1.17e-04 ACTGCCAACT CAGCACTT CTGAAAGCTG chr8:90143329-90143409 41 1.17e-04 aatgctgagt cagcagat atattaaaca chr11:61418719-61418799 34 1.17e-04 CCTGCTGAGT CAGCAGAT TTGTGGGCCC chr3:167776426-167776506 48 1.17e-04 ACTGCTGAGT CAGCAGAT TCTTAAACAG chr4:77874502-77874582 35 1.17e-04 ATTGCTGACT CAGCAAAT ATGATTCAGG chr3:5309731-5309811 43 1.17e-04 ttgcatctgt cagcaaat ttgctttgtc chr17:61211014-61211094 35 1.17e-04 TTTACCTAGT CAGCATAT TTTCAGCCAT chr14:52813661-52813741 32 1.17e-04 tatcatgagt cagcaaat ttatagcgct chr1:243475263-243475343 46 1.17e-04 TCTGCCTTGT CAGCATAT CATTGTCTCA chr8:121920828-121920908 36 1.17e-04 TATGCATAGT CAGCAAAT ATGGTTGCAT chr8:118125061-118125141 41 1.17e-04 TTTGCGGAGT CAGCACTT TCTTTGTTTC chr5:161029906-161029986 36 1.17e-04 AGTGCTGATT CAGCAAAT GTGTTAAAGT chr11:90584528-90584608 33 1.17e-04 tctgctgact cagcactt ggaagattac chr2:185173589-185173669 50 1.17e-04 TTTGTCATGT CAGCATAT TTCTTACCTA chr15:26346755-26346835 37 1.17e-04 ttgcttaggt cagcactt ttctccttaa chr1:91590873-91590953 45 1.29e-04 attgctgagt cagcacat ggaggacagc chr2:208221487-208221567 41 1.29e-04 ATTGCTGTCT CAGCACAT TTTCCCCAAG chr2:120075293-120075373 44 1.29e-04 TTTGTCAACT CAGCACAT TTTTTCTTAG chr16:63091397-63091477 51 1.82e-04 TTTGCTAAGT CAGCATTA ATAAGAGAGA chr7:17814678-17814758 36 1.82e-04 TTTGCAAGCT CAGCAATA ATTCAAGAAA chr11:111666214-11166629 42 1.82e-04 TTTGCTGAAT CAGCATTA TCCATGTGAC chr19:6963615-6963695 49 1.82e-04 ATTGCTGACA CAGCAATA ATCACAGCTG chr8:117802055-117802135 38 1.82e-04 tatgcagtgt cagcatta ttgaaaaatg chr8:27043538-27043618 50 1.82e-04 ACTGCAATGT CAGCAGTA TAAGATGCCC chr7:85150763-85150843 52 1.82e-04 TTTGCCTTGT CAGCAGTA TTCTCTTCAG chr18:12517294-12517374 50 1.82e-04 AATCCTGACT CAGCAATA AATCAATGTA chr12:100605636-10060571 40 1.82e-04 TGTGCTGACT CAGCAATA CTTAATATAA chr7:89232452-89232532 49 1.82e-04 ACTGCAATGT CAGCAATA AATGTCAAAT chr8:63498731-63498811 35 2.49e-04 TCTGCTATGT CAGCATAA ATCCCATTCT chr6:26427792-26427872 44 2.49e-04 tgtgCTGACT CAGCATAA CGGGTTAGCT chr5:37226637-37226717 44 2.49e-04 GTTGCTGAGT CAGCAAAA GTTTTACAGT chr2:178737197-178737277 35 2.49e-04 AGTGATGAGT CAGCAAAA CTGGTTATTA chr2:51459326-51459406 35 2.49e-04 AAAGCTGACA CAGCAAAA TCAGTTGTGC chr1:183951446-183951526 44 2.49e-04 AGTGCAACGT CAGCAAAA GTCACATCCT chr1:200596354-200596434 49 2.49e-04 AGTGCCAAGT CAGCAAAA GGGTGAGGCC chr5:95278281-95278361 35 2.49e-04 AGTGCACACA CAGCAAAA TTTTGTTAAT chr8:138472385-138472465 33 2.49e-04 TTTGATGAGT CAGCAAAA TCCAAACCAT chr16:76072158-76072238 38 2.49e-04 AATGCCTTGT CAGCAAAA TTATATACTT chr8:125489960-125490040 32 2.49e-04 CAACCCAGAG CAGCATAA TGCTGAGTTA chr12:5618458-5618538 53 2.49e-04 tatgttgagt cagcaaaa aaaggaaaat chr2:45398407-45398487 38 2.49e-04 TGTGCTGAGT CAGCAAAA ACGCGGCACC chr7:124650751-124650831 51 2.49e-04 cagcttacgt cagcataa atacatcttt chr10:30060478-30060558 52 2.49e-04 CCTGCTGACT CAGCAAAA ATCCAAACCA chr2:182262889-182262969 34 2.49e-04 AATGCTGACA CAGCAAAA CACAGTCAAG chr10:13544484-13544564 40 2.49e-04 AACGCAGAGT CAGCAAAA TTTACTACTT chr10:59063487-59063567 35 2.49e-04 GATGCTGACT CAGCAAAA TCAGCATTCA chr7:39444662-39444742 49 2.49e-04 TGTGCTGGGT CAGCAGAA TTACTGAAGA chr1:119911253-119911333 48 2.49e-04 TTTGCAAAGT CAGCAAAA TTCTTTCAAA chr9:78189655-78189735 37 2.49e-04 tttgctgaat CAGCAAAA AGACTATGCA chr13:22830403-22830483 48 2.49e-04 AATGCTGACA CAGCAAAA TCAAAACAAA chr7:133725904-133725984 36 2.49e-04 CTGCTTTAGT CAGCAAAA TATATATATC chr11:120952184-12095226 47 2.49e-04 AATGCTTAGT CAGCAGAA ACCATCTACC chr3:59739681-59739761 52 2.49e-04 TTTGCCAACT CAGCAAAA AGTCTATCAA chr6:67374174-67374254 35 2.49e-04 ATTGTCGACT CAGCAAAA TTTTCATGAG chrX:141637863-141637943 50 2.49e-04 TTTGCTGAGT CAGCAAAA TTCTAAAACT chr14:89809850-89809930 40 2.49e-04 CTTGCTGAGT CAGCACTA AAATCTGCCA chr7:143145672-143145752 51 2.49e-04 ttgctgacat cagcataa actggaccaa chr3:50555398-50555478 53 2.49e-04 AGTGCTGATT CAGCAAAA ACAAAACAGA chr22:31011826-31011906 47 2.62e-04 TTTGCTGAGT CAGCACAA GATTGTGGGT chr16:83667046-83667126 45 2.62e-04 TTAGCTGAGT CAGCACAA AAGGCCTTAG chr20:51056036-51056116 46 2.62e-04 ACTGCTGACT CAGCACAA AGCTTGGCAG chrX:150123582-150123662 43 3.27e-04 tttgctgact cagcaact ctgggggtgg chr20:45192603-45192683 44 3.27e-04 attgctgatt cagcaagt ctggggtggg chr8:100721499-100721579 38 3.27e-04 TTTGCTTAGT CAGCATGT AGACACTAGG chr1:248229081-248229161 33 3.27e-04 tatgctgagt cagcatgt ttattagtct chr15:94314809-94314889 44 3.27e-04 ACTGCTGACT CAGCAACT TCTTCCAATG chr18:55665232-55665312 46 3.27e-04 TTTGCTGAGT CAGCATCT GCAAATCTGA chr1:233041237-233041317 33 3.27e-04 CCTGCTGAGT CAGCATCT TCTGTCATGA chr6:101287437-101287517 54 3.27e-04 agtgatgatt cagcatgt tcttctaaat chr3:4305862-4305942 53 3.27e-04 TACGCTGAGT CAGCATCT TTCTAGAGAC chr5:82968144-82968224 36 3.27e-04 ACAGCTGAGT CAGCAGCT TGCAGAGTAA chr2:79820748-79820828 47 3.27e-04 AATGCTGACT CAGCATCT TTCTTGTGTC chr10:60216103-60216183 38 3.27e-04 aatgctgaat cagcaggt ctaggttaga chr17:47116059-47116139 49 3.27e-04 TTTGATGAGT CAGCAACT CAGTGCTCTG chr20:44963246-44963326 33 3.43e-04 TTTGCTGAGT CAGCACCT TTGGCTGATG chr16:79098297-79098377 45 3.43e-04 agtgctgact cagcacct gCAGAACCCA chr18:22988424-22988504 35 3.43e-04 ctgcttaggt cagcacct ttcccccaca chr7:25002951-25003031 47 3.75e-04 ATGCTGATGT CAGCAGTG CCACTCTGTG chr5:108804078-108804158 59 3.75e-04 ttagtccctg cagcattg tttgtgcaag chr1:224590502-224590582 16 3.75e-04 atcacaaata cagcattg attaaatgct chr5:9186345-9186425 48 3.75e-04 AGCATAGTGG CAGCAGTG GGAAATGCCA chr6:12369748-12369828 40 3.75e-04 TCTGCTGAGT CAGCAGTG TGCTGAAAAG chr7:95880244-95880324 44 3.75e-04 tctgctgact cagcagtg aactaaacag chr5:76912905-76912985 35 4.16e-04 AATGCTGAGT cagcactg tccaataaag chr12:42100334-42100414 54 4.16e-04 gttgctgact cagcaaag actaaaatat chr1:41319438-41319518 32 4.16e-04 ATTGCTGACT CAGCACTG CTGTGCCAAG chr6:89080014-89080094 32 4.16e-04 ATTGCTGAGT CAGCACTG CTTAGTAAGC chr2:206687488-206687568 52 4.16e-04 AATGCTGACT CAGCATAG CATCTCAGAA chr13:49745654-49745734 58 4.24e-04 CTCAGGTAAC CAGCACAG TGAGTATAGA chr12:6242942-6243022 41 5.24e-04 attgctgagt cagcaaga ctgcgaaccc chr1:212141214-212141294 34 5.24e-04 GTTGCTGAGT CAGCATCA AAAGATGCCT chr2:75718710-75718790 38 5.24e-04 GATGCTGACT CAGCAAGA TTTTGGCACT chr16:48718219-48718299 38 5.24e-04 AATGCTGACT CAGCAGTC CTCAGTCCCT chr2:31278977-31279057 35 5.24e-04 aatgctgact cagcagga ctgaggggga chr2:200568074-200568154 46 5.24e-04 tttgatgagt cagcatga aaagaggaat chr1:26049941-26050021 39 5.81e-04 tttgctgagt cagcactc cacatctctt chr1:235080342-235080422 43 5.81e-04 ATGCTGACAT CAGCACCA TGTTGTTTGG chr1:216940462-216940542 48 5.81e-04 CATGCTGACT CAGCAAAC TATCCGTAGT chr3:189294427-189294507 49 5.81e-04 tttgctgact cagcaaac cttatagttt chr5:52769632-52769712 44 5.89e-04 TTTGATGAGT CAGCACAC CACTCCTGGT chr10:15407876-15407956 44 7.21e-04 TATGCTGACT CAGCTGTT TAGGGGAACT chr3:182587015-182587095 34 7.21e-04 GGAGCTGAGT CATCAATT CTCCCTAAAT chr14:22456348-22456428 64 7.21e-04 TGAGAGTTAG CATCAGTT AGCAAAGCA chr6:113126000-113126080 44 7.21e-04 atTGCATAGT CATCATTT TTGGTTTTAA chr9:102858953-102859033 6 7.21e-04 ATATA CAGCTTTT TAGAGGAGGC chr6:44886795-44886875 34 7.21e-04 AGTGCTAACT CATCATTT CATAAATCCT chr20:45481105-45481185 41 7.21e-04 AGTGATGAGT CAGCTGTT CAGGGGCACG chr4:138551564-138551644 43 7.21e-04 attgcttagt catcaatt ttgagtttaa chrX:28688361-28688441 34 7.21e-04 TTTGCTGACT CATCAGTT TTAAACCAGA chr1:33401786-33401866 39 8.88e-04 TCAGCTGACT CAGCTAAT AATTCTTCAG chr14:68622885-68622965 35 8.88e-04 TTTGCTATGT CATCACTT TTTTTGTGTG chr13:97902507-97902587 52 8.88e-04 cactttactg catcaaat tcaggtttta chr12:114271415-11427149 65 8.88e-04 actttccaac catcatat ttggaatc chr10:115992695-11599277 41 8.88e-04 TTTGCTGATT CAGCTAAT TTGCCTTGTT chr6:157285339-157285419 52 8.88e-04 TATGCTGAAT CAGCTCTT TTTCATTCTC chr11:85515116-85515196 50 8.88e-04 gttgctgact catcactt tgtagtctgg chr4:142165730-142165810 46 8.88e-04 ATTGCTGACT CAGCTTAT TCAAACTGTT chr11:71682886-71682966 16 9.62e-04 ttgtggatag cagcatgg cattgctgag chr17:53314696-53314776 34 1.19e-03 ACTGCTGTGT CAGCTTTA TTATGCAAGT chr20:33332310-33332390 37 1.19e-03 AATGCTGACT CAACATTT TCATAGAGCA chr4:138590197-138590277 38 1.19e-03 ACTGCTGACA CATCATTA TTCTAGGTTT chr6:149523366-149523446 50 1.19e-03 ACAGCTGACT CATCATTA AGGACAGGTG chr13:99544477-99544557 34 1.19e-03 TCTGCTGACT CAACAATT CCCACAGAGG chr11:85884153-85884233 37 1.51e-03 AGTGCTGACT CAGCATGC TGCAGGTCTG chr6:25898655-25898735 35 1.51e-03 aacgctgact caacaaat ttaaacacta chr2:20191819-20191899 34 1.51e-03 ATTGATGAGT CATCAAAA ATAGACATGA chr19:40576120-40576200 17 1.51e-03 ATATAATAGA CAACAGAT TAAATACTGC chr16:71662822-71662902 45 1.51e-03 ATTGCTGACT CAACACTT TCCAAAGTAA chr8:59785223-59785303 48 1.51e-03 ttgctgaggt catcaaaa acaaggaaag chr7:143631950-143632030 35 1.51e-03 ttgctgacat caTCAGAA AACAAACTCC chr6:32335573-32335653 38 1.51e-03 TATGCTGACT CAACAAAT CATGCTCAAA chr8:10314777-10314857 51 1.51e-03 ttgctgacgt catcacta agccatAGCC chr10:84200646-84200726 51 1.51e-03 TTTGCTGACT CAGCTTAA ATTTAGAAAA chr4:133680512-133680592 66 1.51e-03 ATTGTTAAAT CATCACTA TATTTAA chr2:89888694-89888774 48 1.51e-03 TTGCTGACAT CATCAGAA AAAAAGTCGG chr1:93796332-93796412 6 1.51e-03 actga cagcaagc tactgaattt chrX:65452304-65452384 35 1.69e-03 ATGCTGACAT AAGCAATT TTTATGTTTT chr6:140330562-140330642 41 1.69e-03 tttgctgaat aaGCATTT AACAAATATT chr2:176311088-176311168 42 1.69e-03 AATGCTGACT CAGCCTTT AGGGTAGCCC chr6:130012535-130012615 49 1.69e-03 TTTGCTGAGT AAGCAGTT TTTTCCTAAT chr16:71837362-71837442 35 1.69e-03 AATGCTGACT CAACACAT TTGGCAAGTG chr3:64367176-64367256 36 1.69e-03 tctgctgact cagcaccc ttcttttcct chr5:94714990-94715070 49 1.69e-03 GATGCTGACT AAGCATTT TTCAGAGCCG chr20:21374003-21374083 48 1.69e-03 TCTGCTGAGT AAGCATTT TTGAAACAGG chr4:74719956-74720036 34 1.69e-03 AATGCTGACA CATCACAA TTTCATATTT chr16:6172606-6172686 50 1.69e-03 TGTGCTGAGT CAGCACCC TGGGGCTCAC chr6:64321618-64321698 18 1.69e-03 AATAAAAACC CAACACAT GAACACAATT chr7:156466761-156466841 16 1.83e-03 GGATTCCATG AAGCAGAT GTAACTGCTG chr12:133115360-13311544 38 1.83e-03 TTTGCTGAGT AAGCAAAT ATAGCATTTT chr11:83493526-83493606 41 1.83e-03 aatgctgact aagcagat taaaaatggc chr2:41641406-41641486 53 1.89e-03 AATGCTGACT CAGCGATT GTCACATGAC chr21:45364660-45364740 48 2.02e-03 TGTGCAGTGT CAGCGCTT TTCCATGAAT chr1:174397295-174397375 35 2.13e-03 AATGCTGAGT CAACAGAA ACAttatcct chr5:80150558-80150638 43 2.13e-03 TTTGCTGACT CAACATAA ATCTGGTTGT chr4:126611169-126611249 16 2.13e-03 GTTTTTATAA CAACAGAA GACTCTATTC chr6:157871327-157871407 50 2.44e-03 ATGCTGAGCT AAGCATTA ATAAAGAAAC chr18:11661565-11661645 41 2.44e-03 actgctgact cagctggt ctgaaggaac chr18:3723313-3723393 48 2.44e-03 TTTGATGACT CAGCTTGT TTTAATAGCA chr4:69106493-69106573 51 2.63e-03 TTTGCTGAGT CAGCCAAA ATTTGTCTAC chr7:119951243-119951323 47 2.63e-03 TTGCTGACAT AAGCAGAA TTTTTGTGGC chr3:162650447-162650527 44 2.63e-03 TTTGCTGAGT CAGCCAAA TTAGAATGTA chr12:94057621-94057701 40 2.77e-03 TTTGCCGAGT CAGCGGTA ATATGCTTAT chr12:121258847-12125892 11 2.92e-03 TGATTACTTC CATCAGAG ATACAAAATC chr3:173817670-173817750 60 3.31e-03 TTTCTTGTGG CAGCTGTC ACTGTTGATG chr14:70828760-70828840 51 3.31e-03 AATGCTGACT CAGCTATC TTAACTGTAA chr12:75803751-75803831 3 3.93e-03 TA AAGCAATG TGAGGACAAA chr5:176673725-176673805 8 4.19e-03 CATGCTG CAGCCAAG ATGCAGTGTA chr8:111929200-111929280 21 4.19e-03 ATTCTGTTTC CAACATGA ACATTATGCT chr4:66700593-66700673 70 4.40e-03 ttaaagatgt catctgtt gtc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:42360223-42360303 5.2e-05 31_[+2]_41 chr8:133982638-133982718 5.2e-05 37_[+2]_35 chr8:88943644-88943724 5.2e-05 43_[+2]_29 chr2:189472393-189472473 5.2e-05 43_[+2]_29 chr13:106356356-10635643 5.2e-05 34_[+2]_38 chr16:48993814-48993894 5.2e-05 44_[+2]_28 chr2:169375415-169375495 5.2e-05 42_[+2]_30 chr7:27694955-27695035 5.2e-05 48_[+2]_24 chr10:77196825-77196905 5.2e-05 36_[+2]_36 chrX:43696185-43696265 5.2e-05 39_[+2]_33 chr9:75454289-75454369 5.2e-05 51_[+2]_21 chr1:228588462-228588542 5.2e-05 40_[+2]_32 chr6:68618435-68618515 5.2e-05 41_[+2]_31 chr9:6473309-6473389 5.2e-05 46_[+2]_26 chr18:19410649-19410729 5.2e-05 44_[+2]_28 chr5:126167029-126167109 5.2e-05 46_[+2]_26 chr2:72753903-72753983 5.2e-05 49_[+2]_23 chr3:120460336-120460416 5.2e-05 37_[+2]_35 chr4:7019536-7019616 5.2e-05 41_[+2]_31 chr6:122467040-122467120 5.2e-05 50_[+2]_22 chr5:89841492-89841572 5.2e-05 37_[+2]_35 chr1:119420453-119420533 5.2e-05 37_[+2]_35 chr6:135518360-135518440 5.2e-05 43_[+2]_29 chr2:67749420-67749500 5.2e-05 45_[+2]_27 chr4:80855969-80856049 5.2e-05 50_[+2]_22 chr8:65481399-65481479 5.2e-05 37_[+2]_35 chr20:51100087-51100167 5.2e-05 38_[+2]_34 chr17:32313255-32313335 5.2e-05 47_[+2]_25 chrX:37976108-37976188 5.2e-05 50_[+2]_22 chr16:17779464-17779544 5.2e-05 16_[+2]_56 chr10:30049215-30049295 5.2e-05 44_[+2]_28 chr2:190896865-190896945 5.2e-05 34_[+2]_38 chr10:33690387-33690467 5.2e-05 41_[+2]_31 chr3:150565376-150565456 5.2e-05 45_[+2]_27 chr5:163759751-163759831 0.00012 35_[+2]_37 chr14:66619157-66619237 0.00012 35_[+2]_37 chr2:176109583-176109663 0.00012 42_[+2]_30 chr10:45299422-45299502 0.00012 38_[+2]_34 chr1:26020715-26020795 0.00012 47_[+2]_25 chr12:90369507-90369587 0.00012 49_[+2]_23 chrX:34650699-34650779 0.00012 34_[+2]_38 chr1:61917046-61917126 0.00012 45_[+2]_27 chr16:66492023-66492103 0.00012 46_[+2]_26 chr7:92478720-92478800 0.00012 33_[+2]_39 chr12:96409000-96409080 0.00012 43_[+2]_29 chr3:142974727-142974807 0.00012 38_[+2]_34 chr5:105657111-105657191 0.00012 12_[+2]_60 chr11:13034846-13034926 0.00012 34_[+2]_38 chr20:30515713-30515793 0.00012 49_[+2]_23 chr5:42555373-42555453 0.00012 40_[+2]_32 chr15:37345401-37345481 0.00012 37_[+2]_35 chr4:15304686-15304766 0.00012 50_[+2]_22 chr7:78399756-78399836 0.00012 41_[+2]_31 chr1:93400098-93400178 0.00012 44_[+2]_28 chr2:191847137-191847217 0.00012 47_[+2]_25 chr8:90143329-90143409 0.00012 40_[+2]_32 chr11:61418719-61418799 0.00012 33_[+2]_39 chr3:167776426-167776506 0.00012 47_[+2]_25 chr4:77874502-77874582 0.00012 34_[+2]_38 chr3:5309731-5309811 0.00012 42_[+2]_30 chr17:61211014-61211094 0.00012 34_[+2]_38 chr14:52813661-52813741 0.00012 31_[+2]_41 chr1:243475263-243475343 0.00012 45_[+2]_27 chr8:121920828-121920908 0.00012 35_[+2]_37 chr8:118125061-118125141 0.00012 40_[+2]_32 chr5:161029906-161029986 0.00012 35_[+2]_37 chr11:90584528-90584608 0.00012 32_[+2]_40 chr2:185173589-185173669 0.00012 49_[+2]_23 chr15:26346755-26346835 0.00012 36_[+2]_36 chr1:91590873-91590953 0.00013 44_[+2]_28 chr2:208221487-208221567 0.00013 40_[+2]_32 chr2:120075293-120075373 0.00013 43_[+2]_29 chr16:63091397-63091477 0.00018 50_[+2]_22 chr7:17814678-17814758 0.00018 35_[+2]_37 chr11:111666214-11166629 0.00018 41_[+2]_31 chr19:6963615-6963695 0.00018 48_[+2]_24 chr8:117802055-117802135 0.00018 37_[+2]_35 chr8:27043538-27043618 0.00018 49_[+2]_23 chr7:85150763-85150843 0.00018 51_[+2]_21 chr18:12517294-12517374 0.00018 49_[+2]_23 chr12:100605636-10060571 0.00018 39_[+2]_33 chr7:89232452-89232532 0.00018 48_[+2]_24 chr8:63498731-63498811 0.00025 34_[+2]_38 chr6:26427792-26427872 0.00025 43_[+2]_29 chr5:37226637-37226717 0.00025 43_[+2]_29 chr2:178737197-178737277 0.00025 34_[+2]_38 chr2:51459326-51459406 0.00025 34_[+2]_38 chr1:183951446-183951526 0.00025 43_[+2]_29 chr1:200596354-200596434 0.00025 48_[+2]_24 chr5:95278281-95278361 0.00025 34_[+2]_38 chr8:138472385-138472465 0.00025 32_[+2]_40 chr16:76072158-76072238 0.00025 37_[+2]_35 chr8:125489960-125490040 0.00025 31_[+2]_41 chr12:5618458-5618538 0.00025 52_[+2]_20 chr2:45398407-45398487 0.00025 37_[+2]_35 chr7:124650751-124650831 0.00025 50_[+2]_22 chr10:30060478-30060558 0.00025 51_[+2]_21 chr2:182262889-182262969 0.00025 33_[+2]_39 chr10:13544484-13544564 0.00025 39_[+2]_33 chr10:59063487-59063567 0.00025 34_[+2]_38 chr7:39444662-39444742 0.00025 48_[+2]_24 chr1:119911253-119911333 0.00025 47_[+2]_25 chr9:78189655-78189735 0.00025 36_[+2]_36 chr13:22830403-22830483 0.00025 47_[+2]_25 chr7:133725904-133725984 0.00025 35_[+2]_37 chr11:120952184-12095226 0.00025 46_[+2]_26 chr3:59739681-59739761 0.00025 51_[+2]_21 chr6:67374174-67374254 0.00025 34_[+2]_38 chrX:141637863-141637943 0.00025 49_[+2]_23 chr14:89809850-89809930 0.00025 39_[+2]_33 chr7:143145672-143145752 0.00025 50_[+2]_22 chr3:50555398-50555478 0.00025 52_[+2]_20 chr22:31011826-31011906 0.00026 46_[+2]_26 chr16:83667046-83667126 0.00026 44_[+2]_28 chr20:51056036-51056116 0.00026 45_[+2]_27 chrX:150123582-150123662 0.00033 42_[+2]_30 chr20:45192603-45192683 0.00033 43_[+2]_29 chr8:100721499-100721579 0.00033 37_[+2]_35 chr1:248229081-248229161 0.00033 32_[+2]_40 chr15:94314809-94314889 0.00033 43_[+2]_29 chr18:55665232-55665312 0.00033 45_[+2]_27 chr1:233041237-233041317 0.00033 32_[+2]_40 chr6:101287437-101287517 0.00033 53_[+2]_19 chr3:4305862-4305942 0.00033 52_[+2]_20 chr5:82968144-82968224 0.00033 35_[+2]_37 chr2:79820748-79820828 0.00033 46_[+2]_26 chr10:60216103-60216183 0.00033 37_[+2]_35 chr17:47116059-47116139 0.00033 48_[+2]_24 chr20:44963246-44963326 0.00034 32_[+2]_40 chr16:79098297-79098377 0.00034 44_[+2]_28 chr18:22988424-22988504 0.00034 34_[+2]_38 chr7:25002951-25003031 0.00038 46_[+2]_26 chr5:108804078-108804158 0.00038 58_[+2]_14 chr1:224590502-224590582 0.00038 15_[+2]_57 chr5:9186345-9186425 0.00038 47_[+2]_25 chr6:12369748-12369828 0.00038 39_[+2]_33 chr7:95880244-95880324 0.00038 43_[+2]_29 chr5:76912905-76912985 0.00042 34_[+2]_38 chr12:42100334-42100414 0.00042 53_[+2]_19 chr1:41319438-41319518 0.00042 31_[+2]_41 chr6:89080014-89080094 0.00042 31_[+2]_41 chr2:206687488-206687568 0.00042 51_[+2]_21 chr13:49745654-49745734 0.00042 57_[+2]_15 chr12:6242942-6243022 0.00052 40_[+2]_32 chr1:212141214-212141294 0.00052 33_[+2]_39 chr2:75718710-75718790 0.00052 37_[+2]_35 chr16:48718219-48718299 0.00052 37_[+2]_35 chr2:31278977-31279057 0.00052 34_[+2]_38 chr2:200568074-200568154 0.00052 45_[+2]_27 chr1:26049941-26050021 0.00058 38_[+2]_34 chr1:235080342-235080422 0.00058 42_[+2]_30 chr1:216940462-216940542 0.00058 47_[+2]_25 chr3:189294427-189294507 0.00058 48_[+2]_24 chr5:52769632-52769712 0.00059 43_[+2]_29 chr10:15407876-15407956 0.00072 43_[+2]_29 chr3:182587015-182587095 0.00072 33_[+2]_39 chr14:22456348-22456428 0.00072 63_[+2]_9 chr6:113126000-113126080 0.00072 43_[+2]_29 chr9:102858953-102859033 0.00072 5_[+2]_67 chr6:44886795-44886875 0.00072 33_[+2]_39 chr20:45481105-45481185 0.00072 40_[+2]_32 chr4:138551564-138551644 0.00072 42_[+2]_30 chrX:28688361-28688441 0.00072 33_[+2]_39 chr1:33401786-33401866 0.00089 38_[+2]_34 chr14:68622885-68622965 0.00089 34_[+2]_38 chr13:97902507-97902587 0.00089 51_[+2]_21 chr12:114271415-11427149 0.00089 64_[+2]_8 chr10:115992695-11599277 0.00089 40_[+2]_32 chr6:157285339-157285419 0.00089 51_[+2]_21 chr11:85515116-85515196 0.00089 49_[+2]_23 chr4:142165730-142165810 0.00089 45_[+2]_27 chr11:71682886-71682966 0.00096 15_[+2]_57 chr17:53314696-53314776 0.0012 33_[+2]_39 chr20:33332310-33332390 0.0012 36_[+2]_36 chr4:138590197-138590277 0.0012 37_[+2]_35 chr6:149523366-149523446 0.0012 49_[+2]_23 chr13:99544477-99544557 0.0012 33_[+2]_39 chr11:85884153-85884233 0.0015 36_[+2]_36 chr6:25898655-25898735 0.0015 34_[+2]_38 chr2:20191819-20191899 0.0015 33_[+2]_39 chr19:40576120-40576200 0.0015 16_[+2]_56 chr16:71662822-71662902 0.0015 44_[+2]_28 chr8:59785223-59785303 0.0015 47_[+2]_25 chr7:143631950-143632030 0.0015 34_[+2]_38 chr6:32335573-32335653 0.0015 37_[+2]_35 chr8:10314777-10314857 0.0015 50_[+2]_22 chr10:84200646-84200726 0.0015 50_[+2]_22 chr4:133680512-133680592 0.0015 65_[+2]_7 chr2:89888694-89888774 0.0015 47_[+2]_25 chr1:93796332-93796412 0.0015 5_[+2]_67 chrX:65452304-65452384 0.0017 34_[+2]_38 chr6:140330562-140330642 0.0017 40_[+2]_32 chr2:176311088-176311168 0.0017 41_[+2]_31 chr6:130012535-130012615 0.0017 48_[+2]_24 chr16:71837362-71837442 0.0017 34_[+2]_38 chr3:64367176-64367256 0.0017 35_[+2]_37 chr5:94714990-94715070 0.0017 48_[+2]_24 chr20:21374003-21374083 0.0017 47_[+2]_25 chr4:74719956-74720036 0.0017 33_[+2]_39 chr16:6172606-6172686 0.0017 49_[+2]_23 chr6:64321618-64321698 0.0017 17_[+2]_55 chr7:156466761-156466841 0.0018 15_[+2]_57 chr12:133115360-13311544 0.0018 37_[+2]_35 chr11:83493526-83493606 0.0018 40_[+2]_32 chr2:41641406-41641486 0.0019 52_[+2]_20 chr21:45364660-45364740 0.002 47_[+2]_25 chr1:174397295-174397375 0.0021 34_[+2]_38 chr5:80150558-80150638 0.0021 42_[+2]_30 chr4:126611169-126611249 0.0021 15_[+2]_57 chr6:157871327-157871407 0.0024 49_[+2]_23 chr18:11661565-11661645 0.0024 40_[+2]_32 chr18:3723313-3723393 0.0024 47_[+2]_25 chr4:69106493-69106573 0.0026 50_[+2]_22 chr7:119951243-119951323 0.0026 46_[+2]_26 chr3:162650447-162650527 0.0026 43_[+2]_29 chr12:94057621-94057701 0.0028 39_[+2]_33 chr12:121258847-12125892 0.0029 10_[+2]_62 chr3:173817670-173817750 0.0033 59_[+2]_13 chr14:70828760-70828840 0.0033 50_[+2]_22 chr12:75803751-75803831 0.0039 2_[+2]_70 chr5:176673725-176673805 0.0042 7_[+2]_65 chr8:111929200-111929280 0.0042 20_[+2]_52 chr4:66700593-66700673 0.0044 69_[+2]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCANWW width=8 seqs=223 chr20:42360223-42360303 ( 32) CAGCAATT 1 chr8:133982638-133982718 ( 38) CAGCATTT 1 chr8:88943644-88943724 ( 44) CAGCAGTT 1 chr2:189472393-189472473 ( 44) CAGCAGTT 1 chr13:106356356-10635643 ( 35) CAGCATTT 1 chr16:48993814-48993894 ( 45) CAGCATTT 1 chr2:169375415-169375495 ( 43) CAGCAGTT 1 chr7:27694955-27695035 ( 49) CAGCAATT 1 chr10:77196825-77196905 ( 37) CAGCAGTT 1 chrX:43696185-43696265 ( 40) CAGCAATT 1 chr9:75454289-75454369 ( 52) CAGCAGTT 1 chr1:228588462-228588542 ( 41) CAGCATTT 1 chr6:68618435-68618515 ( 42) CAGCATTT 1 chr9:6473309-6473389 ( 47) CAGCATTT 1 chr18:19410649-19410729 ( 45) CAGCATTT 1 chr5:126167029-126167109 ( 47) CAGCATTT 1 chr2:72753903-72753983 ( 50) CAGCAATT 1 chr3:120460336-120460416 ( 38) CAGCATTT 1 chr4:7019536-7019616 ( 42) CAGCATTT 1 chr6:122467040-122467120 ( 51) CAGCATTT 1 chr5:89841492-89841572 ( 38) CAGCATTT 1 chr1:119420453-119420533 ( 38) CAGCATTT 1 chr6:135518360-135518440 ( 44) CAGCAGTT 1 chr2:67749420-67749500 ( 46) CAGCATTT 1 chr4:80855969-80856049 ( 51) CAGCAGTT 1 chr8:65481399-65481479 ( 38) CAGCATTT 1 chr20:51100087-51100167 ( 39) CAGCATTT 1 chr17:32313255-32313335 ( 48) CAGCAATT 1 chrX:37976108-37976188 ( 51) CAGCAGTT 1 chr16:17779464-17779544 ( 17) CAGCATTT 1 chr10:30049215-30049295 ( 45) CAGCATTT 1 chr2:190896865-190896945 ( 35) CAGCATTT 1 chr10:33690387-33690467 ( 42) CAGCATTT 1 chr3:150565376-150565456 ( 46) CAGCAATT 1 chr5:163759751-163759831 ( 36) CAGCAAAT 1 chr14:66619157-66619237 ( 36) CAGCACTT 1 chr2:176109583-176109663 ( 43) CAGCATAT 1 chr10:45299422-45299502 ( 39) CAGCACTT 1 chr1:26020715-26020795 ( 48) CAGCAGAT 1 chr12:90369507-90369587 ( 50) CAGCAAAT 1 chrX:34650699-34650779 ( 35) CAGCACTT 1 chr1:61917046-61917126 ( 46) CAGCACTT 1 chr16:66492023-66492103 ( 47) CAGCACTT 1 chr7:92478720-92478800 ( 34) CAGCACTT 1 chr12:96409000-96409080 ( 44) CAGCAAAT 1 chr3:142974727-142974807 ( 39) CAGCATAT 1 chr5:105657111-105657191 ( 13) CAGCAGAT 1 chr11:13034846-13034926 ( 35) CAGCAAAT 1 chr20:30515713-30515793 ( 50) CAGCACTT 1 chr5:42555373-42555453 ( 41) CAGCACTT 1 chr15:37345401-37345481 ( 38) CAGCAAAT 1 chr4:15304686-15304766 ( 51) CAGCAAAT 1 chr7:78399756-78399836 ( 42) CAGCAGAT 1 chr1:93400098-93400178 ( 45) CAGCATAT 1 chr2:191847137-191847217 ( 48) CAGCACTT 1 chr8:90143329-90143409 ( 41) CAGCAGAT 1 chr11:61418719-61418799 ( 34) CAGCAGAT 1 chr3:167776426-167776506 ( 48) CAGCAGAT 1 chr4:77874502-77874582 ( 35) CAGCAAAT 1 chr3:5309731-5309811 ( 43) CAGCAAAT 1 chr17:61211014-61211094 ( 35) CAGCATAT 1 chr14:52813661-52813741 ( 32) CAGCAAAT 1 chr1:243475263-243475343 ( 46) CAGCATAT 1 chr8:121920828-121920908 ( 36) CAGCAAAT 1 chr8:118125061-118125141 ( 41) CAGCACTT 1 chr5:161029906-161029986 ( 36) CAGCAAAT 1 chr11:90584528-90584608 ( 33) CAGCACTT 1 chr2:185173589-185173669 ( 50) CAGCATAT 1 chr15:26346755-26346835 ( 37) CAGCACTT 1 chr1:91590873-91590953 ( 45) CAGCACAT 1 chr2:208221487-208221567 ( 41) CAGCACAT 1 chr2:120075293-120075373 ( 44) CAGCACAT 1 chr16:63091397-63091477 ( 51) CAGCATTA 1 chr7:17814678-17814758 ( 36) CAGCAATA 1 chr11:111666214-11166629 ( 42) CAGCATTA 1 chr19:6963615-6963695 ( 49) CAGCAATA 1 chr8:117802055-117802135 ( 38) CAGCATTA 1 chr8:27043538-27043618 ( 50) CAGCAGTA 1 chr7:85150763-85150843 ( 52) CAGCAGTA 1 chr18:12517294-12517374 ( 50) CAGCAATA 1 chr12:100605636-10060571 ( 40) CAGCAATA 1 chr7:89232452-89232532 ( 49) CAGCAATA 1 chr8:63498731-63498811 ( 35) CAGCATAA 1 chr6:26427792-26427872 ( 44) CAGCATAA 1 chr5:37226637-37226717 ( 44) CAGCAAAA 1 chr2:178737197-178737277 ( 35) CAGCAAAA 1 chr2:51459326-51459406 ( 35) CAGCAAAA 1 chr1:183951446-183951526 ( 44) CAGCAAAA 1 chr1:200596354-200596434 ( 49) CAGCAAAA 1 chr5:95278281-95278361 ( 35) CAGCAAAA 1 chr8:138472385-138472465 ( 33) CAGCAAAA 1 chr16:76072158-76072238 ( 38) CAGCAAAA 1 chr8:125489960-125490040 ( 32) CAGCATAA 1 chr12:5618458-5618538 ( 53) CAGCAAAA 1 chr2:45398407-45398487 ( 38) CAGCAAAA 1 chr7:124650751-124650831 ( 51) CAGCATAA 1 chr10:30060478-30060558 ( 52) CAGCAAAA 1 chr2:182262889-182262969 ( 34) CAGCAAAA 1 chr10:13544484-13544564 ( 40) CAGCAAAA 1 chr10:59063487-59063567 ( 35) CAGCAAAA 1 chr7:39444662-39444742 ( 49) CAGCAGAA 1 chr1:119911253-119911333 ( 48) CAGCAAAA 1 chr9:78189655-78189735 ( 37) CAGCAAAA 1 chr13:22830403-22830483 ( 48) CAGCAAAA 1 chr7:133725904-133725984 ( 36) CAGCAAAA 1 chr11:120952184-12095226 ( 47) CAGCAGAA 1 chr3:59739681-59739761 ( 52) CAGCAAAA 1 chr6:67374174-67374254 ( 35) CAGCAAAA 1 chrX:141637863-141637943 ( 50) CAGCAAAA 1 chr14:89809850-89809930 ( 40) CAGCACTA 1 chr7:143145672-143145752 ( 51) CAGCATAA 1 chr3:50555398-50555478 ( 53) CAGCAAAA 1 chr22:31011826-31011906 ( 47) CAGCACAA 1 chr16:83667046-83667126 ( 45) CAGCACAA 1 chr20:51056036-51056116 ( 46) CAGCACAA 1 chrX:150123582-150123662 ( 43) CAGCAACT 1 chr20:45192603-45192683 ( 44) CAGCAAGT 1 chr8:100721499-100721579 ( 38) CAGCATGT 1 chr1:248229081-248229161 ( 33) CAGCATGT 1 chr15:94314809-94314889 ( 44) CAGCAACT 1 chr18:55665232-55665312 ( 46) CAGCATCT 1 chr1:233041237-233041317 ( 33) CAGCATCT 1 chr6:101287437-101287517 ( 54) CAGCATGT 1 chr3:4305862-4305942 ( 53) CAGCATCT 1 chr5:82968144-82968224 ( 36) CAGCAGCT 1 chr2:79820748-79820828 ( 47) CAGCATCT 1 chr10:60216103-60216183 ( 38) CAGCAGGT 1 chr17:47116059-47116139 ( 49) CAGCAACT 1 chr20:44963246-44963326 ( 33) CAGCACCT 1 chr16:79098297-79098377 ( 45) CAGCACCT 1 chr18:22988424-22988504 ( 35) CAGCACCT 1 chr7:25002951-25003031 ( 47) CAGCAGTG 1 chr5:108804078-108804158 ( 59) CAGCATTG 1 chr1:224590502-224590582 ( 16) CAGCATTG 1 chr5:9186345-9186425 ( 48) CAGCAGTG 1 chr6:12369748-12369828 ( 40) CAGCAGTG 1 chr7:95880244-95880324 ( 44) CAGCAGTG 1 chr5:76912905-76912985 ( 35) CAGCACTG 1 chr12:42100334-42100414 ( 54) CAGCAAAG 1 chr1:41319438-41319518 ( 32) CAGCACTG 1 chr6:89080014-89080094 ( 32) CAGCACTG 1 chr2:206687488-206687568 ( 52) CAGCATAG 1 chr13:49745654-49745734 ( 58) CAGCACAG 1 chr12:6242942-6243022 ( 41) CAGCAAGA 1 chr1:212141214-212141294 ( 34) CAGCATCA 1 chr2:75718710-75718790 ( 38) CAGCAAGA 1 chr16:48718219-48718299 ( 38) CAGCAGTC 1 chr2:31278977-31279057 ( 35) CAGCAGGA 1 chr2:200568074-200568154 ( 46) CAGCATGA 1 chr1:26049941-26050021 ( 39) CAGCACTC 1 chr1:235080342-235080422 ( 43) CAGCACCA 1 chr1:216940462-216940542 ( 48) CAGCAAAC 1 chr3:189294427-189294507 ( 49) CAGCAAAC 1 chr5:52769632-52769712 ( 44) CAGCACAC 1 chr10:15407876-15407956 ( 44) CAGCTGTT 1 chr3:182587015-182587095 ( 34) CATCAATT 1 chr14:22456348-22456428 ( 64) CATCAGTT 1 chr6:113126000-113126080 ( 44) CATCATTT 1 chr9:102858953-102859033 ( 6) CAGCTTTT 1 chr6:44886795-44886875 ( 34) CATCATTT 1 chr20:45481105-45481185 ( 41) CAGCTGTT 1 chr4:138551564-138551644 ( 43) CATCAATT 1 chrX:28688361-28688441 ( 34) CATCAGTT 1 chr1:33401786-33401866 ( 39) CAGCTAAT 1 chr14:68622885-68622965 ( 35) CATCACTT 1 chr13:97902507-97902587 ( 52) CATCAAAT 1 chr12:114271415-11427149 ( 65) CATCATAT 1 chr10:115992695-11599277 ( 41) CAGCTAAT 1 chr6:157285339-157285419 ( 52) CAGCTCTT 1 chr11:85515116-85515196 ( 50) CATCACTT 1 chr4:142165730-142165810 ( 46) CAGCTTAT 1 chr11:71682886-71682966 ( 16) CAGCATGG 1 chr17:53314696-53314776 ( 34) CAGCTTTA 1 chr20:33332310-33332390 ( 37) CAACATTT 1 chr4:138590197-138590277 ( 38) CATCATTA 1 chr6:149523366-149523446 ( 50) CATCATTA 1 chr13:99544477-99544557 ( 34) CAACAATT 1 chr11:85884153-85884233 ( 37) CAGCATGC 1 chr6:25898655-25898735 ( 35) CAACAAAT 1 chr2:20191819-20191899 ( 34) CATCAAAA 1 chr19:40576120-40576200 ( 17) CAACAGAT 1 chr16:71662822-71662902 ( 45) CAACACTT 1 chr8:59785223-59785303 ( 48) CATCAAAA 1 chr7:143631950-143632030 ( 35) CATCAGAA 1 chr6:32335573-32335653 ( 38) CAACAAAT 1 chr8:10314777-10314857 ( 51) CATCACTA 1 chr10:84200646-84200726 ( 51) CAGCTTAA 1 chr4:133680512-133680592 ( 66) CATCACTA 1 chr2:89888694-89888774 ( 48) CATCAGAA 1 chr1:93796332-93796412 ( 6) CAGCAAGC 1 chrX:65452304-65452384 ( 35) AAGCAATT 1 chr6:140330562-140330642 ( 41) AAGCATTT 1 chr2:176311088-176311168 ( 42) CAGCCTTT 1 chr6:130012535-130012615 ( 49) AAGCAGTT 1 chr16:71837362-71837442 ( 35) CAACACAT 1 chr3:64367176-64367256 ( 36) CAGCACCC 1 chr5:94714990-94715070 ( 49) AAGCATTT 1 chr20:21374003-21374083 ( 48) AAGCATTT 1 chr4:74719956-74720036 ( 34) CATCACAA 1 chr16:6172606-6172686 ( 50) CAGCACCC 1 chr6:64321618-64321698 ( 18) CAACACAT 1 chr7:156466761-156466841 ( 16) AAGCAGAT 1 chr12:133115360-13311544 ( 38) AAGCAAAT 1 chr11:83493526-83493606 ( 41) AAGCAGAT 1 chr2:41641406-41641486 ( 53) CAGCGATT 1 chr21:45364660-45364740 ( 48) CAGCGCTT 1 chr1:174397295-174397375 ( 35) CAACAGAA 1 chr5:80150558-80150638 ( 43) CAACATAA 1 chr4:126611169-126611249 ( 16) CAACAGAA 1 chr6:157871327-157871407 ( 50) AAGCATTA 1 chr18:11661565-11661645 ( 41) CAGCTGGT 1 chr18:3723313-3723393 ( 48) CAGCTTGT 1 chr4:69106493-69106573 ( 51) CAGCCAAA 1 chr7:119951243-119951323 ( 47) AAGCAGAA 1 chr3:162650447-162650527 ( 44) CAGCCAAA 1 chr12:94057621-94057701 ( 40) CAGCGGTA 1 chr12:121258847-12125892 ( 11) CATCAGAG 1 chr3:173817670-173817750 ( 60) CAGCTGTC 1 chr14:70828760-70828840 ( 51) CAGCTATC 1 chr12:75803751-75803831 ( 3) AAGCAATG 1 chr5:176673725-176673805 ( 8) CAGCCAAG 1 chr8:111929200-111929280 ( 21) CAACATGA 1 chr4:66700593-66700673 ( 70) CATCTGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.94427 E= 7.0e-150 -266 230 -1444 -1444 168 -1444 -1444 -1444 -253 -1444 215 -169 -1444 237 -1444 -1444 154 -343 -384 -227 5 -7 4 -4 39 -152 -151 59 -1 -197 -142 91 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 223 E= 7.0e-150 0.049327 0.950673 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.053812 0.000000 0.852018 0.094170 0.000000 1.000000 0.000000 0.000000 0.905830 0.017937 0.013453 0.062780 0.322870 0.183857 0.197309 0.295964 0.408072 0.067265 0.067265 0.457399 0.309417 0.049327 0.071749 0.569507 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCANWW MEME-2 regular expression -------------------------------------------------------------------------------- CAGCA[AT][TA][TA] -------------------------------------------------------------------------------- Time 8.13 secs. ******************************************************************************** ******************************************************************************** MOTIF TGCMDWGT MEME-3 width = 8 sites = 33 llr = 278 E-value = 1.3e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::543:: pos.-specific C ::a5:::: probability G :a::21a: matrix T a:::46:a bits 2.4 ** 2.1 ** * 1.9 ** * 1.7 *** ** Relative 1.4 *** ** Entropy 1.2 *** ** (12.2 bits) 1.0 **** ** 0.7 **** ** 0.5 **** *** 0.2 ******** 0.0 -------- Multilevel TGCAATGT consensus CTA sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:138590197-138590277 5 2.37e-05 GTTA TGCCTTGT GTATAAAATA chr16:76072158-76072238 30 2.37e-05 CTGAAATTAA TGCCTTGT CAGCAAAATT chr5:42555373-42555453 33 2.37e-05 TTGAAGAAAC TGCCATGT CAGCACTTAT chr4:15304686-15304766 43 2.37e-05 CTTTACATTT TGCCATGT CAGCAAATCT chr10:115992695-11599277 50 2.37e-05 TCAGCTAATT TGCCTTGT TCTCCAAAAG chr1:243475263-243475343 38 2.37e-05 TTCAATTTTC TGCCTTGT CAGCATATCA chr7:85150763-85150843 44 2.37e-05 GGAGAATTTT TGCCTTGT CAGCAGTATT chrX:141637863-141637943 5 2.37e-05 GGCA TGCCTTGT AATTCAGCCC chrX:34650699-34650779 9 3.11e-05 AACATTTC TGCCGTGT AGCACAACAC chr2:176109583-176109663 35 6.94e-05 AAAGAAAAAG TGCAATGT CAGCATATGA chr10:77196825-77196905 29 6.94e-05 TATAGGATAT TGCATTGT CAGCAGTTTG chr8:27043538-27043618 42 6.94e-05 AGTCAAAAAC TGCAATGT CAGCAGTATA chrX:27750231-27750311 70 6.94e-05 cagtaaacaa tgcaatgt tac chr7:89232452-89232532 41 6.94e-05 AAATAAAAAC TGCAATGT CAGCAATAAA chr1:200596354-200596434 41 9.36e-05 CCGTGAAAAG TGCCAAGT CAGCAAAAGG chr1:41319438-41319518 43 9.36e-05 AGCACTGCTG TGCCAAGT TGGAAATagc chr7:78399756-78399836 34 9.36e-05 TTAGAAGAAA TGCCAAGT CAGCAGATAT chr5:126167029-126167109 39 9.36e-05 GCTGCATTTG TGCCAAGT CAGCATTTTC chr21:45364660-45364740 40 1.06e-04 AGCTCAGATG TGCAGTGT CAGCGCTTTT chr5:176673725-176673805 17 1.06e-04 GCAGCCAAGA TGCAGTGT AAAAAAGTGA chr8:117802055-117802135 30 1.06e-04 aggaatttta tgcagtgt cagcattatt chr2:79820748-79820828 23 1.06e-04 CTCTCTCTCT TGCAGTGT GGCTGAAATG chr6:113126000-113126080 36 1.52e-04 ttctagaaat TGCATAGT CATCATTTTT chr6:68618435-68618515 34 1.52e-04 aatgtattta tgcatagt cagcatttat chr1:93400098-93400178 18 1.52e-04 CACACATACT TGCATAGT TCAAATGTAT chr1:119911253-119911333 40 1.52e-04 GAAGTAAATT TGCAAAGT CAGCAAAATT chr8:121920828-121920908 28 1.52e-04 ctaaatATTA TGCATAGT CAGCAAATAT chr5:82968144-82968224 44 1.64e-04 GTCAGCAGCT TGCAGAGT AAAATGTATG chr12:94057621-94057701 57 1.64e-04 AATATGCTTA TGCAGAGT TGAAGAAGAG chr12:96409000-96409080 36 1.79e-04 AATGATTTAA TGCCTGGT CAGCAAATTT chr1:212141214-212141294 47 1.79e-04 CATCAAAAGA TGCCTGGT AAAGATCTCC chr3:120460336-120460416 30 2.08e-04 TTCTATAAAA TGCAAGGT CAGCATTTAT chr3:142974727-142974807 57 2.40e-04 TCTGAACACT TGCCATCT GCTAGATGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:138590197-138590277 2.4e-05 4_[+3]_68 chr16:76072158-76072238 2.4e-05 29_[+3]_43 chr5:42555373-42555453 2.4e-05 32_[+3]_40 chr4:15304686-15304766 2.4e-05 42_[+3]_30 chr10:115992695-11599277 2.4e-05 49_[+3]_23 chr1:243475263-243475343 2.4e-05 37_[+3]_35 chr7:85150763-85150843 2.4e-05 43_[+3]_29 chrX:141637863-141637943 2.4e-05 4_[+3]_68 chrX:34650699-34650779 3.1e-05 8_[+3]_64 chr2:176109583-176109663 6.9e-05 34_[+3]_38 chr10:77196825-77196905 6.9e-05 28_[+3]_44 chr8:27043538-27043618 6.9e-05 41_[+3]_31 chrX:27750231-27750311 6.9e-05 69_[+3]_3 chr7:89232452-89232532 6.9e-05 40_[+3]_32 chr1:200596354-200596434 9.4e-05 40_[+3]_32 chr1:41319438-41319518 9.4e-05 42_[+3]_30 chr7:78399756-78399836 9.4e-05 33_[+3]_39 chr5:126167029-126167109 9.4e-05 38_[+3]_34 chr21:45364660-45364740 0.00011 39_[+3]_33 chr5:176673725-176673805 0.00011 16_[+3]_56 chr8:117802055-117802135 0.00011 29_[+3]_43 chr2:79820748-79820828 0.00011 22_[+3]_50 chr6:113126000-113126080 0.00015 35_[+3]_37 chr6:68618435-68618515 0.00015 33_[+3]_39 chr1:93400098-93400178 0.00015 17_[+3]_55 chr1:119911253-119911333 0.00015 39_[+3]_33 chr8:121920828-121920908 0.00015 27_[+3]_45 chr5:82968144-82968224 0.00016 43_[+3]_29 chr12:94057621-94057701 0.00016 56_[+3]_16 chr12:96409000-96409080 0.00018 35_[+3]_37 chr1:212141214-212141294 0.00018 46_[+3]_26 chr3:120460336-120460416 0.00021 29_[+3]_43 chr3:142974727-142974807 0.00024 56_[+3]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCMDWGT width=8 seqs=33 chr4:138590197-138590277 ( 5) TGCCTTGT 1 chr16:76072158-76072238 ( 30) TGCCTTGT 1 chr5:42555373-42555453 ( 33) TGCCATGT 1 chr4:15304686-15304766 ( 43) TGCCATGT 1 chr10:115992695-11599277 ( 50) TGCCTTGT 1 chr1:243475263-243475343 ( 38) TGCCTTGT 1 chr7:85150763-85150843 ( 44) TGCCTTGT 1 chrX:141637863-141637943 ( 5) TGCCTTGT 1 chrX:34650699-34650779 ( 9) TGCCGTGT 1 chr2:176109583-176109663 ( 35) TGCAATGT 1 chr10:77196825-77196905 ( 29) TGCATTGT 1 chr8:27043538-27043618 ( 42) TGCAATGT 1 chrX:27750231-27750311 ( 70) TGCAATGT 1 chr7:89232452-89232532 ( 41) TGCAATGT 1 chr1:200596354-200596434 ( 41) TGCCAAGT 1 chr1:41319438-41319518 ( 43) TGCCAAGT 1 chr7:78399756-78399836 ( 34) TGCCAAGT 1 chr5:126167029-126167109 ( 39) TGCCAAGT 1 chr21:45364660-45364740 ( 40) TGCAGTGT 1 chr5:176673725-176673805 ( 17) TGCAGTGT 1 chr8:117802055-117802135 ( 30) TGCAGTGT 1 chr2:79820748-79820828 ( 23) TGCAGTGT 1 chr6:113126000-113126080 ( 36) TGCATAGT 1 chr6:68618435-68618515 ( 34) TGCATAGT 1 chr1:93400098-93400178 ( 18) TGCATAGT 1 chr1:119911253-119911333 ( 40) TGCAAAGT 1 chr8:121920828-121920908 ( 28) TGCATAGT 1 chr5:82968144-82968224 ( 44) TGCAGAGT 1 chr12:94057621-94057701 ( 57) TGCAGAGT 1 chr12:96409000-96409080 ( 36) TGCCTGGT 1 chr1:212141214-212141294 ( 47) TGCCTGGT 1 chr3:120460336-120460416 ( 30) TGCAAGGT 1 chr3:142974727-142974807 ( 57) TGCCATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.87609 E= 1.3e-002 -1169 -1169 -1169 172 -1169 -1169 238 -1169 -1169 237 -1169 -1169 73 133 -1169 -1169 34 -1169 14 37 10 -1169 -108 92 -1169 -267 234 -1169 -1169 -1169 -1169 172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 33 E= 1.3e-002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.515152 0.484848 0.000000 0.000000 0.393939 0.000000 0.212121 0.393939 0.333333 0.000000 0.090909 0.575758 0.000000 0.030303 0.969697 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCMDWGT MEME-3 regular expression -------------------------------------------------------------------------------- TGC[AC][ATG][TA]GT -------------------------------------------------------------------------------- Time 11.26 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGGTGGG MEME-4 width = 8 sites = 3 llr = 38 E-value = 1.2e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G aaaa:aaa matrix T ::::a::: bits 2.4 **** *** 2.1 **** *** 1.9 **** *** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (18.4 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGGGTGGG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:42360223-42360303 48 2.92e-06 TTATCATTAT GGGGTGGG ATGCAGCCAT chr20:45192603-45192683 54 2.92e-06 cagcaagtct ggggtggg atccaagaat chr1:228588462-228588542 12 2.92e-06 GTGGGTTTTG GGGGTGGG ACATCTGTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:42360223-42360303 2.9e-06 47_[+4]_25 chr20:45192603-45192683 2.9e-06 53_[+4]_19 chr1:228588462-228588542 2.9e-06 11_[+4]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGGTGGG width=8 seqs=3 chr20:42360223-42360303 ( 48) GGGGTGGG 1 chr20:45192603-45192683 ( 54) GGGGTGGG 1 chr1:228588462-228588542 ( 12) GGGGTGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.0179 E= 1.2e+003 -823 -823 238 -823 -823 -823 238 -823 -823 -823 238 -823 -823 -823 238 -823 -823 -823 -823 172 -823 -823 238 -823 -823 -823 238 -823 -823 -823 238 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 1.2e+003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGGTGGG MEME-4 regular expression -------------------------------------------------------------------------------- GGGGTGGG -------------------------------------------------------------------------------- Time 14.31 secs. ******************************************************************************** ******************************************************************************** MOTIF GGAGGAGG MEME-5 width = 8 sites = 3 llr = 37 E-value = 1.2e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::a::a:: pos.-specific C :::::::: probability G aa:aa:aa matrix T :::::::: bits 2.4 ** ** ** 2.1 ** ** ** 1.9 ** ** ** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (17.6 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GGAGGAGG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:45299422-45299502 5 4.85e-06 GGAG GGAGGAGG TGTGTAAAGT chr2:67749420-67749500 26 4.85e-06 CTAATGCAAA GGAGGAGG AATCTGCCTA chr7:143145672-143145752 5 4.85e-06 agct ggagGAGg tgagaaaata -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:45299422-45299502 4.8e-06 4_[+5]_68 chr2:67749420-67749500 4.8e-06 25_[+5]_47 chr7:143145672-143145752 4.8e-06 4_[+5]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGAGGAGG width=8 seqs=3 chr10:45299422-45299502 ( 5) GGAGGAGG 1 chr2:67749420-67749500 ( 26) GGAGGAGG 1 chr7:143145672-143145752 ( 5) GGAGGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.2293 E= 1.2e+004 -823 -823 238 -823 -823 -823 238 -823 168 -823 -823 -823 -823 -823 238 -823 -823 -823 238 -823 168 -823 -823 -823 -823 -823 238 -823 -823 -823 238 -823 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 1.2e+004 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAGGAGG MEME-5 regular expression -------------------------------------------------------------------------------- GGAGGAGG -------------------------------------------------------------------------------- Time 17.40 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:150565376-150565456 1.67e-02 45_[+2(5.16e-05)]_27 chr15:26346755-26346835 7.45e-03 80 chr10:33690387-33690467 1.88e-02 41_[+2(5.16e-05)]_31 chr4:142165730-142165810 1.04e-02 37_[+1(1.20e-05)]_35 chr2:185173589-185173669 8.75e-02 80 chr3:50555398-50555478 2.43e-02 80 chr11:85515116-85515196 1.02e-02 41_[+1(1.20e-05)]_31 chr1:93796332-93796412 7.28e-02 80 chr12:40149433-40149513 1.08e-01 39_[+1(4.38e-05)]_33 chr7:143145672-143145752 6.66e-06 4_[+5(4.85e-06)]_29_[+1(4.38e-05)]_\ 31 chr2:190896865-190896945 3.90e-02 34_[+2(5.16e-05)]_38 chr4:66700593-66700673 3.58e-02 23_[+1(1.20e-05)]_49 chr11:90584528-90584608 2.64e-03 24_[+1(1.20e-05)]_48 chr2:89888694-89888774 6.89e-02 38_[+1(4.38e-05)]_34 chr7:89232452-89232532 9.48e-03 40_[+3(6.94e-05)]_32 chr5:161029906-161029986 1.71e-02 80 chr18:22988424-22988504 1.35e-01 80 chr10:30049215-30049295 3.78e-03 35_[+1(6.35e-05)]_1_[+2(5.16e-05)]_\ 28 chr13:49745654-49745734 2.61e-03 32_[+1(2.39e-05)]_40 chr14:89809850-89809930 9.10e-04 31_[+1(2.39e-05)]_41 chr12:100605636-10060571 2.18e-03 31_[+1(1.20e-05)]_41 chr16:17779464-17779544 1.88e-02 16_[+2(5.16e-05)]_56 chr4:126611169-126611249 5.12e-02 39_[+1(4.38e-05)]_33 chrX:37976108-37976188 4.27e-03 50_[+2(5.16e-05)]_22 chr4:133680512-133680592 2.16e-02 40_[+1(1.20e-05)]_32 chrX:141637863-141637943 2.23e-04 4_[+3(2.37e-05)]_29_[+1(2.39e-05)]_\ 31 chr17:32313255-32313335 4.77e-03 47_[+2(5.16e-05)]_25 chr14:70828760-70828840 1.16e-02 42_[+1(1.20e-05)]_30 chr6:64321618-64321698 2.32e-02 36_[+1(1.20e-05)]_36 chr18:12517294-12517374 5.95e-02 80 chr6:67374174-67374254 1.41e-01 80 chr12:86623716-86623796 1.85e-01 80 chr20:51100087-51100167 1.43e-02 38_[+2(5.16e-05)]_34 chr8:65481399-65481479 5.47e-02 37_[+2(5.16e-05)]_35 chr3:162650447-162650527 2.17e-02 35_[+1(2.39e-05)]_37 chr3:59739681-59739761 4.86e-02 80 chr9:130950606-130950686 2.58e-03 43_[+1(1.20e-05)]_29 chr6:119982390-119982470 3.60e-02 37_[+1(1.20e-05)]_35 chr10:84200646-84200726 2.14e-02 21_[+1(1.20e-05)]_13_[+1(1.20e-05)]_\ 30 chr11:120952184-12095226 1.18e-02 80 chr8:111931440-111931520 1.17e-01 43_[+1(4.38e-05)]_29 chr4:80855969-80856049 1.15e-01 50_[+2(5.16e-05)]_22 chr1:84383798-84383878 4.81e-02 37_[+1(1.20e-05)]_35 chr7:133725904-133725984 1.10e-01 80 chr2:67749420-67749500 1.03e-05 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chr20:42360223-42360303 1.63e-06 31_[+2(5.16e-05)]_8_[+4(2.92e-06)]_\ 25 chr5:163759751-163759831 2.59e-03 80 chr8:63498731-63498811 6.43e-02 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************