******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/MAFG.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr16:5161138-5161218 1.0000 80 chr11:35327498-35327578 1.0000 80 chr6:157285343-157285423 1.0000 80 chr8:8074015-8074095 1.0000 80 chr1:174397296-174397376 1.0000 80 chr1:183951440-183951520 1.0000 80 chr5:39543655-39543735 1.0000 80 chr9:94668296-94668376 1.0000 80 chr3:107678839-107678919 1.0000 80 chr3:46152374-46152454 1.0000 80 chr4:9142911-9142991 1.0000 80 chr11:3458813-3458893 1.0000 80 chr6:130012534-130012614 1.0000 80 chr1:1617728-1617808 1.0000 80 chr1:145254410-145254490 1.0000 80 chr2:25739777-25739857 1.0000 80 chr3:4305861-4305941 1.0000 80 chr7:135540768-135540848 1.0000 80 chr10:86285704-86285784 1.0000 80 chr10:46998610-46998690 1.0000 80 chr5:1231781-1231861 1.0000 80 chr5:175823489-175823569 1.0000 80 chr5:82267017-82267097 1.0000 80 chr2:218296756-218296836 1.0000 80 chr2:178737180-178737260 1.0000 80 chr7:3186640-3186720 1.0000 80 chr1:171449310-171449390 1.0000 80 chr7:22369705-22369785 1.0000 80 chr2:68515228-68515308 1.0000 80 chr1:101725408-101725488 1.0000 80 chrX:40666284-40666364 1.0000 80 chr1:48472925-48473005 1.0000 80 chr4:40675038-40675118 1.0000 80 chr4:87929059-87929139 1.0000 80 chr4:144860871-144860951 1.0000 80 chr18:11661568-11661648 1.0000 80 chr12:95618460-95618540 1.0000 80 chr22:17080711-17080791 1.0000 80 chr6:89079995-89080075 1.0000 80 chr1:112811178-112811258 1.0000 80 chr14:68622877-68622957 1.0000 80 chr4:3969103-3969183 1.0000 80 chr3:142974734-142974814 1.0000 80 chr22:22624816-22624896 1.0000 80 chr1:41281227-41281307 1.0000 80 chr3:159745742-159745822 1.0000 80 chr8:11766705-11766785 1.0000 80 chr11:86270402-86270482 1.0000 80 chr1:47135961-47136041 1.0000 80 chr1:51914692-51914772 1.0000 80 chr3:181500217-181500297 1.0000 80 chr8:41669945-41670025 1.0000 80 chr5:79128949-79129029 1.0000 80 chr9:102858957-102859037 1.0000 80 chr3:40408461-40408541 1.0000 80 chr7:73142462-73142542 1.0000 80 chr1:1511861-1511941 1.0000 80 chr1:152140499-152140579 1.0000 80 chr6:37606615-37606695 1.0000 80 chr7:5744188-5744268 1.0000 80 chr8:121096935-121097015 1.0000 80 chr5:112386970-112387050 1.0000 80 chr8:80582353-80582433 1.0000 80 chr8:9523484-9523564 1.0000 80 chr11:85884147-85884227 1.0000 80 chr2:173955759-173955839 1.0000 80 chr6:144585905-144585985 1.0000 80 chr7:105252455-105252535 1.0000 80 chr10:44123540-44123620 1.0000 80 chr21:33504406-33504486 1.0000 80 chr20:51828730-51828810 1.0000 80 chr5:119086947-119087027 1.0000 80 chr11:44192441-44192521 1.0000 80 chr1:167611614-167611694 1.0000 80 chr15:39420196-39420276 1.0000 80 chr8:57883583-57883663 1.0000 80 chr6:25898639-25898719 1.0000 80 chr1:92056895-92056975 1.0000 80 chr10:13544490-13544570 1.0000 80 chr6:52913332-52913412 1.0000 80 chr14:77490807-77490887 1.0000 80 chr4:185368904-185368984 1.0000 80 chr1:231644412-231644492 1.0000 80 chr12:27202145-27202225 1.0000 80 chr3:107613957-107614037 1.0000 80 chr7:90877064-90877144 1.0000 80 chr11:66603342-66603422 1.0000 80 chr5:106801951-106802031 1.0000 80 chr12:120667394-12066747 1.0000 80 chr15:58785340-58785420 1.0000 80 chr12:115643258-11564333 1.0000 80 chr12:53969389-53969469 1.0000 80 chr18:60185827-60185907 1.0000 80 chr4:178599217-178599297 1.0000 80 chr2:157302473-157302553 1.0000 80 chr11:124351500-12435158 1.0000 80 chr6:137222473-137222553 1.0000 80 chr6:4337418-4337498 1.0000 80 chr20:48955107-48955187 1.0000 80 chr18:413430-413510 1.0000 80 chr8:133982641-133982721 1.0000 80 chr1:233041233-233041313 1.0000 80 chr19:11175565-11175645 1.0000 80 chr5:85919781-85919861 1.0000 80 chr7:29597735-29597815 1.0000 80 chr5:148187701-148187781 1.0000 80 chr18:29171203-29171283 1.0000 80 chr1:100408855-100408935 1.0000 80 chr12:16502082-16502162 1.0000 80 chr21:36834172-36834252 1.0000 80 chr22:29916942-29917022 1.0000 80 chr15:92972879-92972959 1.0000 80 chr3:11347131-11347211 1.0000 80 chr2:98294986-98295066 1.0000 80 chr4:41959888-41959968 1.0000 80 chr2:74781898-74781978 1.0000 80 chr2:189191570-189191650 1.0000 80 chr17:79936022-79936102 1.0000 80 chr5:134057603-134057683 1.0000 80 chr3:152788117-152788197 1.0000 80 chr2:158913451-158913531 1.0000 80 chr1:167717381-167717461 1.0000 80 chr18:1011493-1011573 1.0000 80 chr7:101765459-101765539 1.0000 80 chr8:23204046-23204126 1.0000 80 chr1:248171219-248171299 1.0000 80 chr8:102150877-102150957 1.0000 80 chr7:115872084-115872164 1.0000 80 chr11:61418701-61418781 1.0000 80 chr5:10689591-10689671 1.0000 80 chr1:24106676-24106756 1.0000 80 chr1:209969491-209969571 1.0000 80 chr22:25125407-25125487 1.0000 80 chr4:77693712-77693792 1.0000 80 chr10:15599355-15599435 1.0000 80 chr10:9373687-9373767 1.0000 80 chr6:16852164-16852244 1.0000 80 chr7:73189444-73189524 1.0000 80 chr2:236080289-236080369 1.0000 80 chr19:55836716-55836796 1.0000 80 chr6:39174231-39174311 1.0000 80 chr6:144605726-144605806 1.0000 80 chr8:62632131-62632211 1.0000 80 chr18:1037104-1037184 1.0000 80 chr3:15375306-15375386 1.0000 80 chr8:101407849-101407929 1.0000 80 chr3:34098461-34098541 1.0000 80 chr10:74671687-74671767 1.0000 80 chr1:20957380-20957460 1.0000 80 chr17:53761034-53761114 1.0000 80 chr22:23612678-23612758 1.0000 80 chr14:96828445-96828525 1.0000 80 chr6:31441707-31441787 1.0000 80 chr16:66492037-66492117 1.0000 80 chr1:230010070-230010150 1.0000 80 chr10:121354985-12135506 1.0000 80 chr11:71483360-71483440 1.0000 80 chr18:32527737-32527817 1.0000 80 chr4:186425399-186425479 1.0000 80 chr9:130177601-130177681 1.0000 80 chr11:124478230-12447831 1.0000 80 chr16:53113228-53113308 1.0000 80 chr8:101843044-101843124 1.0000 80 chr1:196047993-196048073 1.0000 80 chr6:150189553-150189633 1.0000 80 chr11:77892337-77892417 1.0000 80 chr6:160931375-160931455 1.0000 80 chr17:27685056-27685136 1.0000 80 chr7:32708890-32708970 1.0000 80 chr5:43353180-43353260 1.0000 80 chr7:87000128-87000208 1.0000 80 chr1:16092444-16092524 1.0000 80 chr3:186176590-186176670 1.0000 80 chr8:132959287-132959367 1.0000 80 chr3:195648347-195648427 1.0000 80 chr6:91306826-91306906 1.0000 80 chr1:161509651-161509731 1.0000 80 chr9:131930464-131930544 1.0000 80 chr6:26427785-26427865 1.0000 80 chr19:47494605-47494685 1.0000 80 chr17:32740230-32740310 1.0000 80 chr4:8421286-8421366 1.0000 80 chr5:37226632-37226712 1.0000 80 chr8:102388414-102388494 1.0000 80 chr5:137296686-137296766 1.0000 80 chr10:15407867-15407947 1.0000 80 chr11:77313540-77313620 1.0000 80 chr2:120075299-120075379 1.0000 80 chr14:34934613-34934693 1.0000 80 chr16:89086855-89086935 1.0000 80 chr1:211904890-211904970 1.0000 80 chr3:142723830-142723910 1.0000 80 chr1:45072542-45072622 1.0000 80 chr1:78469117-78469197 1.0000 80 chr17:27161509-27161589 1.0000 80 chr1:154452352-154452432 1.0000 80 chr12:65550254-65550334 1.0000 80 chr4:10097892-10097972 1.0000 80 chr17:79689675-79689755 1.0000 80 chr1:114362519-114362599 1.0000 80 chr17:70562994-70563074 1.0000 80 chr13:51728445-51728525 1.0000 80 chr6:83413907-83413987 1.0000 80 chr6:35314630-35314710 1.0000 80 chr11:124266900-12426698 1.0000 80 chr1:159849956-159850036 1.0000 80 chr11:45579057-45579137 1.0000 80 chr16:77691055-77691135 1.0000 80 chr2:69244410-69244490 1.0000 80 chr16:58213040-58213120 1.0000 80 chr5:84748484-84748564 1.0000 80 chr8:62789477-62789557 1.0000 80 chr2:169284045-169284125 1.0000 80 chr17:43565247-43565327 1.0000 80 chr6:83604625-83604705 1.0000 80 chr2:219828863-219828943 1.0000 80 chr4:77874490-77874570 1.0000 80 chr1:15256019-15256099 1.0000 80 chr10:79291315-79291395 1.0000 80 chr3:49256186-49256266 1.0000 80 chr1:244102686-244102766 1.0000 80 chr14:22456350-22456430 1.0000 80 chr1:228588447-228588527 1.0000 80 chr15:96935728-96935808 1.0000 80 chr5:148181349-148181429 1.0000 80 chr2:61927750-61927830 1.0000 80 chr10:7998613-7998693 1.0000 80 chr15:100781923-10078200 1.0000 80 chr6:7255371-7255451 1.0000 80 chr13:44748947-44749027 1.0000 80 chr1:248229075-248229155 1.0000 80 chr12:106916599-10691667 1.0000 80 chr16:2965542-2965622 1.0000 80 chr1:212141216-212141296 1.0000 80 chr15:63712812-63712892 1.0000 80 chr9:71393727-71393807 1.0000 80 chr20:40272344-40272424 1.0000 80 chr9:33619731-33619811 1.0000 80 chr2:190212415-190212495 1.0000 80 chr6:144399162-144399242 1.0000 80 chr1:240662463-240662543 1.0000 80 chr6:16342701-16342781 1.0000 80 chr5:142628921-142629001 1.0000 80 chr2:8369878-8369958 1.0000 80 chr11:94190479-94190559 1.0000 80 chr2:192815373-192815453 1.0000 80 chr6:129822729-129822809 1.0000 80 chr9:132717315-132717395 1.0000 80 chr1:166644576-166644656 1.0000 80 chr7:112063095-112063175 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_MAFG/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/MAFG.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.291 C 0.212 G 0.213 T 0.285 Background letter frequencies (from file dataset with add-one prior applied): A 0.291 C 0.212 G 0.213 T 0.285 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CTGASTCA MEME-1 width = 8 sites = 250 llr = 1813 E-value = 1.6e-292 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 31:91:19 pos.-specific C 7:::4:9: probability G ::9:5::: matrix T :9:1:9:: bits 2.2 2.0 1.8 * 1.6 * * Relative 1.3 *** *** Entropy 1.1 **** *** (10.5 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGAGTCA consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:129822729-129822809 42 1.40e-05 AGAACCTCTG CTGAGTCA GCACTCACTG chr1:240662463-240662543 28 1.40e-05 TACAGTAGTG CTGAGTCA TCCTTCCTGA chr20:40272344-40272424 49 1.40e-05 GGCAAATCAG CTGAGTCA CTCTCGGCCA chr1:212141216-212141296 26 1.40e-05 CTCAAAGTTG CTGAGTCA GCATCAAAAG chr12:106916599-10691667 29 1.40e-05 GTAAATAACG CTGAGTCA TCCCTTTTAC chr1:248229075-248229155 33 1.40e-05 cacaaatatg ctgagtca gcatgtttat chr13:44748947-44749027 31 1.40e-05 tagaaatgtg ctgagtca ctcctgaagc chr10:7998613-7998693 27 1.40e-05 TGAATTTGTG CTGAGTCA TTCATGATTT chr2:61927750-61927830 32 1.40e-05 TATCTTTCTG CTGAGTca gcggtatgcc chr3:49256186-49256266 29 1.40e-05 gccaaacttg ctgagtca tgcaggcctg chr16:77691055-77691135 47 1.40e-05 gaggaagttg ctgagtca tctctttccc chr11:45579057-45579137 29 1.40e-05 ggggatgttg ctgagtca tggaattaag chr11:124266900-12426698 48 1.40e-05 AGAAAAACAG CTGAGTCA TGCACCCAAC chr13:51728445-51728525 51 1.40e-05 agtggaattg ctgagtca tagggactcc chr17:79689675-79689755 55 1.40e-05 CAGTCACCTG CTGAGTCA GCAGTCATTT chr16:89086855-89086935 28 1.40e-05 CCCCACATTG CTGAGTCA TCTTGCTACC chr11:77313540-77313620 30 1.40e-05 tttataattg ctgagtca tgaatgtgaa chr8:102388414-102388494 39 1.40e-05 TGTGATTCTG CTGAGTCA TTGTTGGGAA chr5:37226632-37226712 43 1.40e-05 CCTTTTGTTG CTGAGTCA GCAAAAGTTT chr9:131930464-131930544 48 1.40e-05 ggctgaattg ctgagtca ccgtatggag chr8:132959287-132959367 33 1.40e-05 agtgtaattg ctgagtca tgtagtaact chr1:16092444-16092524 27 1.40e-05 CTCACTTCCG CTGAGTCA GCAGCAGCAT chr7:87000128-87000208 45 1.40e-05 agagaatttg ctgagtca taggatatgt chr17:27685056-27685136 50 1.40e-05 agtgaaattg ctgagtca tagagtaagt chr6:160931375-160931455 47 1.40e-05 TGAGTATTTG CTGAGTCA CTATCTGCAT chr8:101843044-101843124 45 1.40e-05 gcctgaagag ctgagtca gcataaagca chr11:124478230-12447831 50 1.40e-05 ataaattgtg ctgagtca gctggatagc chr18:32527737-32527817 33 1.40e-05 TTACAAAGTG CTGAGTCA CACATATTTA chr10:121354985-12135506 27 1.40e-05 AATGCAAATG CTGAGTCA TCACTCTTCA chr1:230010070-230010150 32 1.40e-05 acaggttttg ctgagtca ctggaagagc chr16:66492037-66492117 27 1.40e-05 CCTGAAGGTG CTGAGTCA GCACTTTTGC chr22:23612678-23612758 47 1.40e-05 TTGGGAACTG Ctgagtca gatatacaga chr3:34098461-34098541 49 1.40e-05 agtgaaattg ctgagtca cttagtaagt chr6:16852164-16852244 36 1.40e-05 AAAGAGATTG CTGAGTCA TTGTTATGAA chr4:77693712-77693792 47 1.40e-05 TGTAAATGTG CTGAGTCA GCTTCCTTAT chr5:10689591-10689671 31 1.40e-05 CTCCTTTGTG CTGAGTCA TGACTGAATC chr11:61418701-61418781 46 1.40e-05 CTGAGACCTG CTGAGTCA GCAGATTTGT chr1:167717381-167717461 32 1.40e-05 attgctattg ctgagtca tcataactct chr4:41959888-41959968 47 1.40e-05 ACCAAAAGTG CTGAGTCA GCTATAAAAC chr15:92972879-92972959 51 1.40e-05 AGAGCAGATG CTGAGTCA TGTTGAATTA chr21:36834172-36834252 33 1.40e-05 ATCATATTTG CTGAGTCA CTCAAGTACT chr19:11175565-11175645 47 1.40e-05 GGCCCAAATG CTGAGTCA GCACCTCTGC chr1:233041233-233041313 31 1.40e-05 CTCAGACCTG CTGAGTCA GCATCTTCTG chr20:48955107-48955187 36 1.40e-05 CTTTTAAATG CTGAGTCA GCAAACAGCC chr11:124351500-12435158 28 1.40e-05 AGAAAAAAAG CTGAGTCA TACACCCTGC chr5:106801951-106802031 47 1.40e-05 GTATTAAATG CTGAGTCA TTGCTATGCT chr11:66603342-66603422 51 1.40e-05 agtagaattg ctgagtca tatgataaca chr21:33504406-33504486 31 1.40e-05 AAGAGTAATG CTGAGTCA TCCAGTCAGC chr8:121096935-121097015 43 1.40e-05 CCCCAAAAAG CTGAGTCA GCATTTATTT chr3:181500217-181500297 46 1.40e-05 ttcttcacag ctgagtca tactgtaaac chr3:159745742-159745822 31 1.40e-05 TCTGTAAATG CTGAGTCA TTTCCAGATT chr6:89079995-89080075 45 1.40e-05 GGAGTTATTG CTGAGTCA GCACTGCTTA chr12:95618460-95618540 44 1.40e-05 tcaggttctg ctgagtca gccctacttc chr4:40675038-40675118 49 1.40e-05 GAGTAGAAAG CTGAGTCA TCCTTCCCTC chr2:68515228-68515308 44 1.40e-05 CTCATTTTCC CTGAGTCA GTAAGAAGAT chr7:3186640-3186720 12 1.40e-05 ACAATTTGTT CTGAGTCA TATCTCTTAT chr2:218296756-218296836 29 1.40e-05 TGTGTTTTTG CTGAGTCA TGGCCAGTTT chr7:135540768-135540848 27 1.40e-05 GCTGCCTTTG CTGAGTCA GCTCATTAGC chr3:4305861-4305941 48 1.40e-05 CCCAGTTACG CTGAGTCA GCATCTTTCT chr1:174397296-174397376 28 1.40e-05 GACAGAAATG CTGAGTCA ACAGAAACAt chr11:35327498-35327578 37 1.40e-05 TAGAGGACAG CTGAGTCA TCAGTTTTCT chr5:142628921-142629001 40 2.80e-05 CCTACCCTCC CTGACTCA GCATTTTAGT chr15:63712812-63712892 47 2.80e-05 ccattttccg ctgactca tgctgtgctc chr1:228588447-228588527 50 2.80e-05 TGTCCTGCTG CTGACTCA GCATTTCACA chr14:22456350-22456430 35 2.80e-05 TCTGAGATAG CTGACTCA GCGAAAAACT chr4:77874490-77874570 41 2.80e-05 ATGCCTATTG CTGACTCA GCAAATATGA chr2:69244410-69244490 36 2.80e-05 TGAAAAAATG CTGACTCA TTTTTTCCTT chr1:159849956-159850036 27 2.80e-05 TATGTAACCG CTGACTCA TGATTACCGG chr6:35314630-35314710 45 2.80e-05 GAAATATTTG CTGACTCA GGCTCAGAAT chr4:10097892-10097972 39 2.80e-05 GGGTGTGCAG CTGACTCA GCATTACTCA chr17:27161509-27161589 44 2.80e-05 cttttttttg ctgactca gccaaattgt chr10:15407867-15407947 47 2.80e-05 CTTACATATG CTGACTCA GCTGTTTAGG chr6:26427785-26427865 45 2.80e-05 ggcggctgtg CTGACTCA GCATAACGGG chr6:150189553-150189633 55 2.80e-05 ACTCAACAAA CTGACTCA ACAAATTGAG chr4:186425399-186425479 28 2.80e-05 GTCAAAATTG CTGACTCA TGTGATGTGA chr17:53761034-53761114 27 2.80e-05 GCAAAGAAGG CTGACTCA GCATTAATGC chr1:20957380-20957460 29 2.80e-05 aggttttgtg ctgactca gcacacgagg chr18:1037104-1037184 32 2.80e-05 tccctgacac ctgactca gcaatttcta chr6:39174231-39174311 43 2.80e-05 GTGGGAACTG CTGACTCA TCACCTTCCC chr7:73189444-73189524 17 2.80e-05 gattacattg ctgactca tgttaccata chr10:15599355-15599435 43 2.80e-05 aaaaaaaGTG CTGACTCA TGAACACTGA chr7:115872084-115872164 29 2.80e-05 GTAAAAACTG CTGACTCA TGGAGGTTCT chr1:248171219-248171299 48 2.80e-05 cacaaatatg ctgactca gcatatttat chr3:152788117-152788197 33 2.80e-05 GATAAAGATG CTGACTCA GTCTATTAAG chr2:189191570-189191650 45 2.80e-05 GACTATGCTC CTGACTCA GCAGAATTCA chr3:11347131-11347211 31 2.80e-05 TTGTGATTTG CTGACTCA TACCTCCCAA chr22:29916942-29917022 36 2.80e-05 GAGGAAACTG CTGACTCA CCCAACTTTA chr7:29597735-29597815 32 2.80e-05 TGTGGGACAg ctgactca gcagatagtg chr12:115643258-11564333 31 2.80e-05 cacccaggaa ctgactca gcacaatagg chr14:77490807-77490887 65 2.80e-05 GACAAAATTG CTGACTCA GCGCAGTT chr1:92056895-92056975 30 2.80e-05 GAAGAAACTG CTGACTCA TGCAAAAGTC chr6:25898639-25898719 45 2.80e-05 acagaaaacg ctgactca acaaatttaa chr7:105252455-105252535 42 2.80e-05 CCGCTTCTGG CTGACTCA GCATTTACTA chr11:85884147-85884227 37 2.80e-05 AGTGCTAGTG CTGACTCA GCATGCTGCA chr11:86270402-86270482 45 2.80e-05 GCTTCTTATG CTGACTCA GCTTCTACCA chr1:41281227-41281307 28 2.80e-05 CGTGTTTTTG CTGACTCA GCTCTGGTCT chr1:112811178-112811258 61 2.80e-05 AGTCCAAGAA CTGACTCA GCAGAGGATG chr18:11661568-11661648 66 2.80e-05 ctaggagaag ctgactca ccaagga chr4:144860871-144860951 24 2.80e-05 ggatagtctg ctgactca gcataatttc chr1:171449310-171449390 41 2.80e-05 TACTCATTTG CTGACTCA GGTGAATTTA chr1:145254410-145254490 49 2.80e-05 GAAGTCATGG CTGACTCA GCATTTCCCC chr1:1617728-1617808 52 2.80e-05 tttttttttG CTGACTCA TGGGTTAGAA chr11:94190479-94190559 38 4.72e-05 agagagaaga atgagtca gcaaatacag chr2:190212415-190212495 31 4.72e-05 TTCTGCTGTG ATGAGTCA GCATTTCTGG chr17:43565247-43565327 35 4.72e-05 GTACCAATTG ATGAGTCA TGTTTTTTCA chr8:62789477-62789557 27 4.72e-05 CCAACTCAGC ATGAGTCA GCATTTCTTG chr5:84748484-84748564 43 4.72e-05 agataaagga atgagtca tcagtttctt chr6:83413907-83413987 30 4.72e-05 AATCAACATG ATGAGTCA TCAGTTCCTA chr6:91306826-91306906 38 4.72e-05 AGATAAGAAC ATGAGTCA GCAAAAAAAT chr3:15375306-15375386 34 4.72e-05 TAAATCAAGG ATGAGTCA GCAATTCTGT chr7:101765459-101765539 33 4.72e-05 TGTCTTTTTG ATGAGTCA TCAGTTTCCA chr5:148187701-148187781 16 4.72e-05 ACATCTTTTT ATGAGTCA GTGCATATCA chr12:53969389-53969469 43 4.72e-05 GCAGGGAGTG ATGAGTCA GCATTACTCT chr6:52913332-52913412 48 4.72e-05 CCCAAATATG ATGAGTCA CCTCATAATC chr15:39420196-39420276 23 4.72e-05 TCCAGGCCTC ATGAGTCA GCAATTCCTG chr10:44123540-44123620 29 4.72e-05 aggaaaagtg atgagtca tttataagca chr8:80582353-80582433 60 4.72e-05 tatttatttg atgagtca taacaatgac chr22:22624816-22624896 46 4.72e-05 TCTTTTTCTG ATGAGTCA Tcttcctaga chr2:178737180-178737260 46 4.72e-05 AGCAGAAGTG ATGAGTCA GCAAAACTGG chr3:107678839-107678919 28 4.72e-05 agcaaaaact atgagtca gcggaagtga chr7:112063095-112063175 40 6.64e-05 CGGGGGCAGG ATGACTCA GCACTTCCTA chr1:166644576-166644656 43 6.64e-05 TTCTTGGAGG ATGACTCA GCAATCCTGG chr9:132717315-132717395 42 6.64e-05 gtccacaatg atgactca gcaaaacaga chr2:192815373-192815453 37 6.64e-05 GGCACAAAGA ATGACTCA GCACAATGCA chr2:8369878-8369958 24 6.64e-05 tgagaacagc atgactca gcaaagctga chr6:16342701-16342781 27 6.64e-05 gaattaccac atgactca gcaattccac chr9:33619731-33619811 58 6.64e-05 tcttgcatac atgactca gcaattccac chr15:100781923-10078200 59 6.64e-05 TTGTCTAACC ATGACTCA GCCCTTTTCT chr15:96935728-96935808 25 6.64e-05 gaaagcaaca atgactca gcacttcaca chr2:219828863-219828943 45 6.64e-05 AGCTGGAGCA ATGACTCA GCAATTCCCC chr2:169284045-169284125 28 6.64e-05 ATGCTGATTG ATGACTCA GCATTCACGT chr16:58213040-58213120 43 6.64e-05 ttaatttaaa atgactca gcaaaaagat chr12:65550254-65550334 25 6.64e-05 GATTTTACAA ATGActca gcatttattt chr14:34934613-34934693 28 6.64e-05 ggctagattg atgactca gcatttcatt chr4:8421286-8421366 42 6.64e-05 gagtgaccac atgactca gcaattccac chr3:195648347-195648427 28 6.64e-05 CAGCGTTTTG ATGACTCA TCATTTTGCC chr7:32708890-32708970 42 6.64e-05 gttgcagtca atgactca gccatttctg chr11:77892337-77892417 23 6.64e-05 acaatagaat atgactca gcaatatata chr1:196047993-196048073 25 6.64e-05 ATTATGAACT ATGACTCA GCATTATGAA chr2:236080289-236080369 11 6.64e-05 TATCATCAAC ATGACTCA GCTAATTCCT chr18:1011493-1011573 44 6.64e-05 GAATTTCATC ATGACTCA GCAGAAATTA chr2:158913451-158913531 31 6.64e-05 ttatcttctg atgactca acaaaattga chr18:413430-413510 43 6.64e-05 caatggctat atgactca gcaatttcac chr2:157302473-157302553 45 6.64e-05 cttccatttt atgactca gcaattcctt chr15:58785340-58785420 29 6.64e-05 CTCATCAGTG ATGACTCA GCAAAATCAA chr3:107613957-107614037 41 6.64e-05 TATAGAAGTG ATGACTCA GTGTTTTCAG chr12:27202145-27202225 58 6.64e-05 GACATATAGG ATGACTCA GCATTGCATT chr1:231644412-231644492 32 6.64e-05 CAAGGATTTG ATGACTCA ACATAAAAAT chr3:40408461-40408541 25 6.64e-05 TAGAACATTC ATGACTCA GCACATCTAT chr1:51914692-51914772 45 6.64e-05 agaattatca atgactca gcaatcctat chr2:25739777-25739857 24 6.64e-05 cttgcactgc atgactca gcagttctac chr1:78469117-78469197 44 8.56e-05 GAAAGAATTG CTGAATCA TCATTGCTTG chr10:74671687-74671767 46 8.56e-05 GTGTGTATTG CTGAATCA TCACTCTGGA chr8:133982641-133982721 29 8.56e-05 ttcaaacctg ctgaatca gcatttcctg chr4:3969103-3969183 30 8.56e-05 TGCCGATTTG CTGAATCA TCAACTTCCT chr11:3458813-3458893 32 8.56e-05 TGCCGATTTG CTGAATCA TCAACTTCCT chr6:157285343-157285423 42 8.56e-05 ACCACATATG CTGAATCA GCTCTTTTTC chr16:5161138-5161218 42 8.56e-05 TGTCGATTTG CTGAATCA TCAACTTCCT chr2:74781898-74781978 20 9.99e-05 GCTTTTTTTG CAGAGTCA GCGCTTTGGG chr12:16502082-16502162 40 9.99e-05 TACAAAATTG CAGAGTCA TGGCCCTGGG chr10:13544490-13544570 28 9.99e-05 TTCAATAACG CAGAGTCA GCAAAATTTA chrX:40666284-40666364 46 9.99e-05 ctttttagtg cagagtca gcaaaatacc chr5:1231781-1231861 52 1.14e-04 TTTATTTCTG CAGACTCA TGAATTTTCA chr5:148181349-148181429 47 1.28e-04 GAAAAATGTG CTGTGTCA CTGCTGTCCT chr1:154452352-154452432 27 1.28e-04 ATGGCAACTG CTGTGTCA TCATTTTCCC chr1:1511861-1511941 39 1.28e-04 tctcaaagtg ctgtgtca gcattattct chr22:25125407-25125487 43 1.61e-04 cattttactg ctgagtaa gcaaacttag chr6:130012534-130012614 44 1.61e-04 TAACATTTTG CTGAGTAA GCAGTTTTTT chr1:209969491-209969571 36 2.22e-04 CAAGATTTTG CTGAGTCT GCATCTTTTG chr18:29171203-29171283 45 2.22e-04 GGAGAAATTG CTGACTAA GCAAAGCTTC chr6:137222473-137222553 20 2.22e-04 tcacaattct gtgagtca gcaatttgga chr1:101725408-101725488 43 2.22e-04 ATTAGAAGTG CTGACTAA TGGTCTGATG chr10:79291315-79291395 34 2.90e-04 gtgcatgtgc gtgactca gcacacatcc chr1:114362519-114362599 38 2.90e-04 CCAATATATC ATGAATCA GCATTTTTTT chr19:47494605-47494685 45 2.90e-04 GCGGGAACTG CTGACACA GCACCTTTTT chr8:62632131-62632211 14 2.90e-04 AAAATTAGTA CTGACACA GTCCTTTTTG chr2:98294986-98295066 45 2.90e-04 taacagataa gtgactca gcataaaagg chr18:60185827-60185907 42 2.90e-04 TTTAAAAAAC ATGAATCA GCAAATTCCA chr5:112386970-112387050 6 2.90e-04 TGAGA ATGAATCA GCACTGACGA chr7:5744188-5744268 32 2.90e-04 CAGTGTTTTG CTGACACA TACTTTTCAA chr1:48472925-48473005 23 2.90e-04 TTTCACTATG GTGACTCA GCATAACCCA chr1:183951440-183951520 70 2.90e-04 CACATCCTTT GTGACTCA TGG chr16:2965542-2965622 28 3.58e-04 TTTGAAACTG CTTAGTCA TTGGTCCTAA chr5:39543655-39543735 49 3.58e-04 cttaaaatcc cttagtca ttctcaattT chr3:142723830-142723910 28 4.44e-04 CAATTGTTTG CTTACTCA GCAAAATTAG chr12:120667394-12066747 48 4.44e-04 atataaagtg ctgactta gcacagtgcc chr8:57883583-57883663 45 4.44e-04 GTAAGAATTG CTGACTTA GTATTTTTAA chr1:45072542-45072622 7 5.70e-04 ctagct ctggctca catagagtgc chr5:43353180-43353260 28 5.70e-04 CAAATTTATG CTGCCTCA GCAATCCCTG chr9:71393727-71393807 29 5.89e-04 tctttttctg ctaactca tcaaactcat chr5:134057603-134057683 68 6.15e-04 GTTTTAGGTA ATGAGTAA GAAAT chr1:244102686-244102766 54 6.80e-04 TCCTTCCTGC ATGACTAA GCATTCTCTT chr6:144399162-144399242 25 7.18e-04 aagagtgttg atgacaca gcatttctta chr17:70562994-70563074 4 7.18e-04 ATC ATGACTCT GCAAAACTCA chr1:24106676-24106756 37 7.18e-04 TCACTTGTTG ATGACTCT GCAGTTTTCT chr1:152140499-152140579 7 8.15e-04 GCATGC CTGAGCCA TGACTTGGCT chr16:53113228-53113308 46 9.37e-04 gattgaacca atGACTTA GCATAAAATG chr11:71483360-71483440 44 9.37e-04 CAGGAAGTTG ATGATTCA GCAACTCGAC chr7:22369705-22369785 38 9.37e-04 GATAAAAACG ATGACTCG ACACATAAAG chr4:9142911-9142991 41 9.37e-04 CAGGAAGTTG ATGATTCA GCAAATCGGC chr3:46152374-46152454 50 9.37e-04 tgctgacttg cagaatca tcagcaatga chr8:8074015-8074095 42 9.37e-04 CAGGAAGTTG ATGATTCA GCAAATCGAC chr1:211904890-211904970 30 1.13e-03 GTGAAAAATG CAGTGTCA TGGGATCAAG chr6:31441707-31441787 45 1.13e-03 GGAAAAAATG CAGTGTCA GCAAACAGTA chr17:79936022-79936102 27 1.13e-03 GCGATTTTTG CCGAGTCA CTCACTGCAC chr10:46998610-46998690 52 1.13e-03 AGATAATTTG CAGTGTCA TCCTTGTGTC chr8:102150877-102150957 38 1.26e-03 ACAAAAATGG CTGAATCT AATAATGCTG chr1:47135961-47136041 14 1.30e-03 atagaatgaa aggagtca aggatgactt chr9:94668296-94668376 18 1.30e-03 CACACACACA CAGAGTAA TAATTGCTGA chr3:142974734-142974814 26 1.58e-03 TTCAATTCTG CTTAATCA GCATATTCTG chr2:120075299-120075379 14 1.64e-03 ACAGCAGTGT GTGTGTCA GAACTTTTTG chr17:32740230-32740310 32 1.80e-03 ATGAAATATG CATAGTCA TCATTAGTGT chr8:11766705-11766785 50 1.80e-03 acaaaaactg ctgaatga ctttaggtcc chr19:55836716-55836796 23 2.07e-03 TGCTTTTCCT CTGAGAAA GATGACGTTG chr7:90877064-90877144 16 2.07e-03 TCCAATCCAC CAGAGTGA AAATGccctg chr4:185368904-185368984 52 2.07e-03 tcattgtcaa aagtgtca agttcatgga chr6:144585905-144585985 31 2.07e-03 AAAGAAACTG CAGCGTCA TCACAAAACT chr5:175823489-175823569 31 2.07e-03 TGGTAGAATG CTTTGTCA GCGATCCTTg chr1:15256019-15256099 20 2.37e-03 ACACAGCAAG CTGACAAA AATGGAACGT chr9:130177601-130177681 42 2.37e-03 gctgcttttt ctgtctta tcagcataat chr4:178599217-178599297 49 2.37e-03 TTGTTTTTTG CAAAGTCA GCAAAAACCA chr8:9523484-9523564 30 2.37e-03 aataaatgtg caaagtca tgctctgaaa chr8:101407849-101407929 18 2.51e-03 actttgctga ctgtgtga gttggagcaa chr7:73142462-73142542 30 2.51e-03 tcctacttgt gtgacaca gcactttttg chr22:17080711-17080791 45 2.51e-03 TTTGTATCCA CTGACACT TAAGTTCTCG chr6:83604625-83604705 41 2.63e-03 CTGAAAATTG CTATGTCA TGGCATATTC chr14:68622877-68622957 37 2.63e-03 AGACAATTTG CTATGTCA TCACTTTTTT chr4:87929059-87929139 30 2.63e-03 CGTGAATCTG CTGAGTAG GCAAAGACCG chr3:186176590-186176670 31 3.34e-03 ataattagtg ctgacata gcacttaaac chr1:100408855-100408935 63 3.56e-03 gggagaaaag ctgagtgt tggcagaagc chr5:79128949-79129029 23 4.59e-03 tatgtcagca atgagtat ccaatgagat chr1:167611614-167611694 34 5.05e-03 GAAATGAAAA CTGCTTCA TAAGCACAAA chr14:96828445-96828525 16 5.46e-03 AGGTTTTAAA ATGTCTGA AAATTGCAAC chr6:7255371-7255451 43 5.88e-03 GTGAGGGAGG ATGACTAG GCTTATTTTA chr1:161509651-161509731 65 5.88e-03 TCGTACTTCT CTGACCAA AATCAACG chr20:51828730-51828810 27 6.21e-03 TGAAAGAACA ATGACTTT GCAATAATTT chr8:23204046-23204126 2 6.47e-03 T ATGCCTAA ATGACATTTC chr10:9373687-9373767 60 6.91e-03 GTTTCTAAAA ATAAGTCT AGAATGAAAT chr2:173955759-173955839 41 7.34e-03 ATTAAATTTG ATGACTTG CAGTTTTTTG chr6:37606615-37606695 44 7.34e-03 TTTCATCAGG ATGACTTG CAAATTTTCT chr5:82267017-82267097 58 7.71e-03 gagctctctg attggtca ggtgtaagct chr10:86285704-86285784 64 7.71e-03 ttactacatg attggtca agtgtgaat chr5:85919781-85919861 19 8.37e-03 AAAGTGATGC CAGAATGA TAGTGCTAAA chr5:137296686-137296766 7 9.05e-03 GCACTC AGGAGACA TGCCTTGATC chr5:119086947-119087027 32 9.05e-03 gtaaagagag ctcactaa aaagctgatt chr6:4337418-4337498 30 1.01e-02 agaaaaaatg ctgacgta tgctgtcctc chr6:144605726-144605806 25 1.42e-02 GGGGTAAAAA AAAAATCA GCAACGTCAG chr8:41669945-41670025 34 1.49e-02 ggaggaaatg catggtca gcaaaggctg chr11:44192441-44192521 72 2.66e-02 tctcgaagaa cagaaaaa g chr9:102858957-102859037 68 3.45e-02 CTTGGCTTTT CTTTATCT GTATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:129822729-129822809 1.4e-05 41_[+1]_31 chr1:240662463-240662543 1.4e-05 27_[+1]_45 chr20:40272344-40272424 1.4e-05 48_[+1]_24 chr1:212141216-212141296 1.4e-05 25_[+1]_47 chr12:106916599-10691667 1.4e-05 28_[+1]_44 chr1:248229075-248229155 1.4e-05 32_[+1]_40 chr13:44748947-44749027 1.4e-05 30_[+1]_42 chr10:7998613-7998693 1.4e-05 26_[+1]_46 chr2:61927750-61927830 1.4e-05 31_[+1]_41 chr3:49256186-49256266 1.4e-05 28_[+1]_44 chr16:77691055-77691135 1.4e-05 46_[+1]_26 chr11:45579057-45579137 1.4e-05 28_[+1]_44 chr11:124266900-12426698 1.4e-05 47_[+1]_25 chr13:51728445-51728525 1.4e-05 50_[+1]_22 chr17:79689675-79689755 1.4e-05 54_[+1]_18 chr16:89086855-89086935 1.4e-05 27_[+1]_45 chr11:77313540-77313620 1.4e-05 29_[+1]_43 chr8:102388414-102388494 1.4e-05 38_[+1]_34 chr5:37226632-37226712 1.4e-05 42_[+1]_30 chr9:131930464-131930544 1.4e-05 47_[+1]_25 chr8:132959287-132959367 1.4e-05 32_[+1]_40 chr1:16092444-16092524 1.4e-05 26_[+1]_46 chr7:87000128-87000208 1.4e-05 44_[+1]_28 chr17:27685056-27685136 1.4e-05 49_[+1]_23 chr6:160931375-160931455 1.4e-05 46_[+1]_26 chr8:101843044-101843124 1.4e-05 44_[+1]_28 chr11:124478230-12447831 1.4e-05 49_[+1]_23 chr18:32527737-32527817 1.4e-05 32_[+1]_40 chr10:121354985-12135506 1.4e-05 26_[+1]_46 chr1:230010070-230010150 1.4e-05 31_[+1]_41 chr16:66492037-66492117 1.4e-05 26_[+1]_46 chr22:23612678-23612758 1.4e-05 46_[+1]_26 chr3:34098461-34098541 1.4e-05 48_[+1]_24 chr6:16852164-16852244 1.4e-05 35_[+1]_37 chr4:77693712-77693792 1.4e-05 46_[+1]_26 chr5:10689591-10689671 1.4e-05 30_[+1]_42 chr11:61418701-61418781 1.4e-05 45_[+1]_27 chr1:167717381-167717461 1.4e-05 31_[+1]_41 chr4:41959888-41959968 1.4e-05 46_[+1]_26 chr15:92972879-92972959 1.4e-05 50_[+1]_22 chr21:36834172-36834252 1.4e-05 32_[+1]_40 chr19:11175565-11175645 1.4e-05 46_[+1]_26 chr1:233041233-233041313 1.4e-05 30_[+1]_42 chr20:48955107-48955187 1.4e-05 35_[+1]_37 chr11:124351500-12435158 1.4e-05 27_[+1]_45 chr5:106801951-106802031 1.4e-05 46_[+1]_26 chr11:66603342-66603422 1.4e-05 50_[+1]_22 chr21:33504406-33504486 1.4e-05 30_[+1]_42 chr8:121096935-121097015 1.4e-05 42_[+1]_30 chr3:181500217-181500297 1.4e-05 45_[+1]_27 chr3:159745742-159745822 1.4e-05 30_[+1]_42 chr6:89079995-89080075 1.4e-05 44_[+1]_28 chr12:95618460-95618540 1.4e-05 43_[+1]_29 chr4:40675038-40675118 1.4e-05 48_[+1]_24 chr2:68515228-68515308 1.4e-05 43_[+1]_29 chr7:3186640-3186720 1.4e-05 11_[+1]_61 chr2:218296756-218296836 1.4e-05 28_[+1]_44 chr7:135540768-135540848 1.4e-05 26_[+1]_46 chr3:4305861-4305941 1.4e-05 47_[+1]_25 chr1:174397296-174397376 1.4e-05 27_[+1]_45 chr11:35327498-35327578 1.4e-05 36_[+1]_36 chr5:142628921-142629001 2.8e-05 39_[+1]_33 chr15:63712812-63712892 2.8e-05 46_[+1]_26 chr1:228588447-228588527 2.8e-05 49_[+1]_23 chr14:22456350-22456430 2.8e-05 34_[+1]_38 chr4:77874490-77874570 2.8e-05 40_[+1]_32 chr2:69244410-69244490 2.8e-05 35_[+1]_37 chr1:159849956-159850036 2.8e-05 26_[+1]_46 chr6:35314630-35314710 2.8e-05 44_[+1]_28 chr4:10097892-10097972 2.8e-05 38_[+1]_34 chr17:27161509-27161589 2.8e-05 43_[+1]_29 chr10:15407867-15407947 2.8e-05 46_[+1]_26 chr6:26427785-26427865 2.8e-05 44_[+1]_28 chr6:150189553-150189633 2.8e-05 54_[+1]_18 chr4:186425399-186425479 2.8e-05 27_[+1]_45 chr17:53761034-53761114 2.8e-05 26_[+1]_46 chr1:20957380-20957460 2.8e-05 28_[+1]_44 chr18:1037104-1037184 2.8e-05 31_[+1]_41 chr6:39174231-39174311 2.8e-05 42_[+1]_30 chr7:73189444-73189524 2.8e-05 16_[+1]_56 chr10:15599355-15599435 2.8e-05 42_[+1]_30 chr7:115872084-115872164 2.8e-05 28_[+1]_44 chr1:248171219-248171299 2.8e-05 47_[+1]_25 chr3:152788117-152788197 2.8e-05 32_[+1]_40 chr2:189191570-189191650 2.8e-05 44_[+1]_28 chr3:11347131-11347211 2.8e-05 30_[+1]_42 chr22:29916942-29917022 2.8e-05 35_[+1]_37 chr7:29597735-29597815 2.8e-05 31_[+1]_41 chr12:115643258-11564333 2.8e-05 30_[+1]_42 chr14:77490807-77490887 2.8e-05 64_[+1]_8 chr1:92056895-92056975 2.8e-05 29_[+1]_43 chr6:25898639-25898719 2.8e-05 44_[+1]_28 chr7:105252455-105252535 2.8e-05 41_[+1]_31 chr11:85884147-85884227 2.8e-05 36_[+1]_36 chr11:86270402-86270482 2.8e-05 44_[+1]_28 chr1:41281227-41281307 2.8e-05 27_[+1]_45 chr1:112811178-112811258 2.8e-05 60_[+1]_12 chr18:11661568-11661648 2.8e-05 65_[+1]_7 chr4:144860871-144860951 2.8e-05 23_[+1]_49 chr1:171449310-171449390 2.8e-05 40_[+1]_32 chr1:145254410-145254490 2.8e-05 48_[+1]_24 chr1:1617728-1617808 2.8e-05 51_[+1]_21 chr11:94190479-94190559 4.7e-05 37_[+1]_35 chr2:190212415-190212495 4.7e-05 30_[+1]_42 chr17:43565247-43565327 4.7e-05 34_[+1]_38 chr8:62789477-62789557 4.7e-05 26_[+1]_46 chr5:84748484-84748564 4.7e-05 42_[+1]_30 chr6:83413907-83413987 4.7e-05 29_[+1]_43 chr6:91306826-91306906 4.7e-05 37_[+1]_35 chr3:15375306-15375386 4.7e-05 33_[+1]_39 chr7:101765459-101765539 4.7e-05 32_[+1]_40 chr5:148187701-148187781 4.7e-05 15_[+1]_57 chr12:53969389-53969469 4.7e-05 42_[+1]_30 chr6:52913332-52913412 4.7e-05 47_[+1]_25 chr15:39420196-39420276 4.7e-05 22_[+1]_50 chr10:44123540-44123620 4.7e-05 28_[+1]_44 chr8:80582353-80582433 4.7e-05 59_[+1]_13 chr22:22624816-22624896 4.7e-05 45_[+1]_27 chr2:178737180-178737260 4.7e-05 45_[+1]_27 chr3:107678839-107678919 4.7e-05 27_[+1]_45 chr7:112063095-112063175 6.6e-05 39_[+1]_33 chr1:166644576-166644656 6.6e-05 42_[+1]_30 chr9:132717315-132717395 6.6e-05 41_[+1]_31 chr2:192815373-192815453 6.6e-05 36_[+1]_36 chr2:8369878-8369958 6.6e-05 23_[+1]_49 chr6:16342701-16342781 6.6e-05 26_[+1]_46 chr9:33619731-33619811 6.6e-05 57_[+1]_15 chr15:100781923-10078200 6.6e-05 58_[+1]_14 chr15:96935728-96935808 6.6e-05 24_[+1]_48 chr2:219828863-219828943 6.6e-05 44_[+1]_28 chr2:169284045-169284125 6.6e-05 27_[+1]_45 chr16:58213040-58213120 6.6e-05 42_[+1]_30 chr12:65550254-65550334 6.6e-05 24_[+1]_48 chr14:34934613-34934693 6.6e-05 27_[+1]_45 chr4:8421286-8421366 6.6e-05 41_[+1]_31 chr3:195648347-195648427 6.6e-05 27_[+1]_45 chr7:32708890-32708970 6.6e-05 41_[+1]_31 chr11:77892337-77892417 6.6e-05 22_[+1]_50 chr1:196047993-196048073 6.6e-05 24_[+1]_48 chr2:236080289-236080369 6.6e-05 10_[+1]_62 chr18:1011493-1011573 6.6e-05 43_[+1]_29 chr2:158913451-158913531 6.6e-05 30_[+1]_42 chr18:413430-413510 6.6e-05 42_[+1]_30 chr2:157302473-157302553 6.6e-05 44_[+1]_28 chr15:58785340-58785420 6.6e-05 28_[+1]_44 chr3:107613957-107614037 6.6e-05 40_[+1]_32 chr12:27202145-27202225 6.6e-05 57_[+1]_15 chr1:231644412-231644492 6.6e-05 31_[+1]_41 chr3:40408461-40408541 6.6e-05 24_[+1]_48 chr1:51914692-51914772 6.6e-05 44_[+1]_28 chr2:25739777-25739857 6.6e-05 23_[+1]_49 chr1:78469117-78469197 8.6e-05 43_[+1]_29 chr10:74671687-74671767 8.6e-05 45_[+1]_27 chr8:133982641-133982721 8.6e-05 28_[+1]_44 chr4:3969103-3969183 8.6e-05 29_[+1]_43 chr11:3458813-3458893 8.6e-05 31_[+1]_41 chr6:157285343-157285423 8.6e-05 41_[+1]_31 chr16:5161138-5161218 8.6e-05 41_[+1]_31 chr2:74781898-74781978 0.0001 19_[+1]_53 chr12:16502082-16502162 0.0001 39_[+1]_33 chr10:13544490-13544570 0.0001 27_[+1]_45 chrX:40666284-40666364 0.0001 45_[+1]_27 chr5:1231781-1231861 0.00011 51_[+1]_21 chr5:148181349-148181429 0.00013 46_[+1]_26 chr1:154452352-154452432 0.00013 26_[+1]_46 chr1:1511861-1511941 0.00013 38_[+1]_34 chr22:25125407-25125487 0.00016 42_[+1]_30 chr6:130012534-130012614 0.00016 43_[+1]_29 chr1:209969491-209969571 0.00022 35_[+1]_37 chr18:29171203-29171283 0.00022 44_[+1]_28 chr6:137222473-137222553 0.00022 19_[+1]_53 chr1:101725408-101725488 0.00022 42_[+1]_30 chr10:79291315-79291395 0.00029 33_[+1]_39 chr1:114362519-114362599 0.00029 37_[+1]_35 chr19:47494605-47494685 0.00029 44_[+1]_28 chr8:62632131-62632211 0.00029 13_[+1]_59 chr2:98294986-98295066 0.00029 44_[+1]_28 chr18:60185827-60185907 0.00029 41_[+1]_31 chr5:112386970-112387050 0.00029 5_[+1]_67 chr7:5744188-5744268 0.00029 31_[+1]_41 chr1:48472925-48473005 0.00029 22_[+1]_50 chr1:183951440-183951520 0.00029 69_[+1]_3 chr16:2965542-2965622 0.00036 27_[+1]_45 chr5:39543655-39543735 0.00036 48_[+1]_24 chr3:142723830-142723910 0.00044 27_[+1]_45 chr12:120667394-12066747 0.00044 47_[+1]_25 chr8:57883583-57883663 0.00044 44_[+1]_28 chr1:45072542-45072622 0.00057 6_[+1]_66 chr5:43353180-43353260 0.00057 27_[+1]_45 chr9:71393727-71393807 0.00059 28_[+1]_44 chr5:134057603-134057683 0.00062 67_[+1]_5 chr1:244102686-244102766 0.00068 53_[+1]_19 chr6:144399162-144399242 0.00072 24_[+1]_48 chr17:70562994-70563074 0.00072 3_[+1]_69 chr1:24106676-24106756 0.00072 36_[+1]_36 chr1:152140499-152140579 0.00082 6_[+1]_66 chr16:53113228-53113308 0.00094 45_[+1]_27 chr11:71483360-71483440 0.00094 43_[+1]_29 chr7:22369705-22369785 0.00094 37_[+1]_35 chr4:9142911-9142991 0.00094 40_[+1]_32 chr3:46152374-46152454 0.00094 49_[+1]_23 chr8:8074015-8074095 0.00094 41_[+1]_31 chr1:211904890-211904970 0.0011 29_[+1]_43 chr6:31441707-31441787 0.0011 44_[+1]_28 chr17:79936022-79936102 0.0011 26_[+1]_46 chr10:46998610-46998690 0.0011 51_[+1]_21 chr8:102150877-102150957 0.0013 37_[+1]_35 chr1:47135961-47136041 0.0013 13_[+1]_59 chr9:94668296-94668376 0.0013 17_[+1]_55 chr3:142974734-142974814 0.0016 25_[+1]_47 chr2:120075299-120075379 0.0016 13_[+1]_59 chr17:32740230-32740310 0.0018 31_[+1]_41 chr8:11766705-11766785 0.0018 49_[+1]_23 chr19:55836716-55836796 0.0021 22_[+1]_50 chr7:90877064-90877144 0.0021 15_[+1]_57 chr4:185368904-185368984 0.0021 51_[+1]_21 chr6:144585905-144585985 0.0021 30_[+1]_42 chr5:175823489-175823569 0.0021 30_[+1]_42 chr1:15256019-15256099 0.0024 19_[+1]_53 chr9:130177601-130177681 0.0024 41_[+1]_31 chr4:178599217-178599297 0.0024 48_[+1]_24 chr8:9523484-9523564 0.0024 29_[+1]_43 chr8:101407849-101407929 0.0025 17_[+1]_55 chr7:73142462-73142542 0.0025 29_[+1]_43 chr22:17080711-17080791 0.0025 44_[+1]_28 chr6:83604625-83604705 0.0026 40_[+1]_32 chr14:68622877-68622957 0.0026 36_[+1]_36 chr4:87929059-87929139 0.0026 29_[+1]_43 chr3:186176590-186176670 0.0033 30_[+1]_42 chr1:100408855-100408935 0.0036 62_[+1]_10 chr5:79128949-79129029 0.0046 22_[+1]_50 chr1:167611614-167611694 0.0051 33_[+1]_39 chr14:96828445-96828525 0.0055 15_[+1]_57 chr6:7255371-7255451 0.0059 42_[+1]_30 chr1:161509651-161509731 0.0059 64_[+1]_8 chr20:51828730-51828810 0.0062 26_[+1]_46 chr8:23204046-23204126 0.0065 1_[+1]_71 chr10:9373687-9373767 0.0069 59_[+1]_13 chr2:173955759-173955839 0.0073 40_[+1]_32 chr6:37606615-37606695 0.0073 43_[+1]_29 chr5:82267017-82267097 0.0077 57_[+1]_15 chr10:86285704-86285784 0.0077 63_[+1]_9 chr5:85919781-85919861 0.0084 18_[+1]_54 chr5:137296686-137296766 0.0091 6_[+1]_66 chr5:119086947-119087027 0.0091 31_[+1]_41 chr6:4337418-4337498 0.01 29_[+1]_43 chr6:144605726-144605806 0.014 24_[+1]_48 chr8:41669945-41670025 0.015 33_[+1]_39 chr11:44192441-44192521 0.027 71_[+1]_1 chr9:102858957-102859037 0.035 67_[+1]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGASTCA width=8 seqs=250 chr6:129822729-129822809 ( 42) CTGAGTCA 1 chr1:240662463-240662543 ( 28) CTGAGTCA 1 chr20:40272344-40272424 ( 49) CTGAGTCA 1 chr1:212141216-212141296 ( 26) CTGAGTCA 1 chr12:106916599-10691667 ( 29) CTGAGTCA 1 chr1:248229075-248229155 ( 33) CTGAGTCA 1 chr13:44748947-44749027 ( 31) CTGAGTCA 1 chr10:7998613-7998693 ( 27) CTGAGTCA 1 chr2:61927750-61927830 ( 32) CTGAGTCA 1 chr3:49256186-49256266 ( 29) CTGAGTCA 1 chr16:77691055-77691135 ( 47) CTGAGTCA 1 chr11:45579057-45579137 ( 29) CTGAGTCA 1 chr11:124266900-12426698 ( 48) CTGAGTCA 1 chr13:51728445-51728525 ( 51) CTGAGTCA 1 chr17:79689675-79689755 ( 55) CTGAGTCA 1 chr16:89086855-89086935 ( 28) CTGAGTCA 1 chr11:77313540-77313620 ( 30) CTGAGTCA 1 chr8:102388414-102388494 ( 39) CTGAGTCA 1 chr5:37226632-37226712 ( 43) CTGAGTCA 1 chr9:131930464-131930544 ( 48) CTGAGTCA 1 chr8:132959287-132959367 ( 33) CTGAGTCA 1 chr1:16092444-16092524 ( 27) CTGAGTCA 1 chr7:87000128-87000208 ( 45) CTGAGTCA 1 chr17:27685056-27685136 ( 50) CTGAGTCA 1 chr6:160931375-160931455 ( 47) CTGAGTCA 1 chr8:101843044-101843124 ( 45) CTGAGTCA 1 chr11:124478230-12447831 ( 50) CTGAGTCA 1 chr18:32527737-32527817 ( 33) CTGAGTCA 1 chr10:121354985-12135506 ( 27) CTGAGTCA 1 chr1:230010070-230010150 ( 32) CTGAGTCA 1 chr16:66492037-66492117 ( 27) CTGAGTCA 1 chr22:23612678-23612758 ( 47) CTGAGTCA 1 chr3:34098461-34098541 ( 49) CTGAGTCA 1 chr6:16852164-16852244 ( 36) CTGAGTCA 1 chr4:77693712-77693792 ( 47) CTGAGTCA 1 chr5:10689591-10689671 ( 31) CTGAGTCA 1 chr11:61418701-61418781 ( 46) CTGAGTCA 1 chr1:167717381-167717461 ( 32) CTGAGTCA 1 chr4:41959888-41959968 ( 47) CTGAGTCA 1 chr15:92972879-92972959 ( 51) CTGAGTCA 1 chr21:36834172-36834252 ( 33) CTGAGTCA 1 chr19:11175565-11175645 ( 47) CTGAGTCA 1 chr1:233041233-233041313 ( 31) CTGAGTCA 1 chr20:48955107-48955187 ( 36) CTGAGTCA 1 chr11:124351500-12435158 ( 28) CTGAGTCA 1 chr5:106801951-106802031 ( 47) CTGAGTCA 1 chr11:66603342-66603422 ( 51) CTGAGTCA 1 chr21:33504406-33504486 ( 31) CTGAGTCA 1 chr8:121096935-121097015 ( 43) CTGAGTCA 1 chr3:181500217-181500297 ( 46) CTGAGTCA 1 chr3:159745742-159745822 ( 31) CTGAGTCA 1 chr6:89079995-89080075 ( 45) CTGAGTCA 1 chr12:95618460-95618540 ( 44) CTGAGTCA 1 chr4:40675038-40675118 ( 49) CTGAGTCA 1 chr2:68515228-68515308 ( 44) CTGAGTCA 1 chr7:3186640-3186720 ( 12) CTGAGTCA 1 chr2:218296756-218296836 ( 29) CTGAGTCA 1 chr7:135540768-135540848 ( 27) CTGAGTCA 1 chr3:4305861-4305941 ( 48) CTGAGTCA 1 chr1:174397296-174397376 ( 28) CTGAGTCA 1 chr11:35327498-35327578 ( 37) CTGAGTCA 1 chr5:142628921-142629001 ( 40) CTGACTCA 1 chr15:63712812-63712892 ( 47) CTGACTCA 1 chr1:228588447-228588527 ( 50) CTGACTCA 1 chr14:22456350-22456430 ( 35) CTGACTCA 1 chr4:77874490-77874570 ( 41) CTGACTCA 1 chr2:69244410-69244490 ( 36) CTGACTCA 1 chr1:159849956-159850036 ( 27) CTGACTCA 1 chr6:35314630-35314710 ( 45) CTGACTCA 1 chr4:10097892-10097972 ( 39) CTGACTCA 1 chr17:27161509-27161589 ( 44) CTGACTCA 1 chr10:15407867-15407947 ( 47) CTGACTCA 1 chr6:26427785-26427865 ( 45) CTGACTCA 1 chr6:150189553-150189633 ( 55) CTGACTCA 1 chr4:186425399-186425479 ( 28) CTGACTCA 1 chr17:53761034-53761114 ( 27) CTGACTCA 1 chr1:20957380-20957460 ( 29) CTGACTCA 1 chr18:1037104-1037184 ( 32) CTGACTCA 1 chr6:39174231-39174311 ( 43) CTGACTCA 1 chr7:73189444-73189524 ( 17) CTGACTCA 1 chr10:15599355-15599435 ( 43) CTGACTCA 1 chr7:115872084-115872164 ( 29) CTGACTCA 1 chr1:248171219-248171299 ( 48) CTGACTCA 1 chr3:152788117-152788197 ( 33) CTGACTCA 1 chr2:189191570-189191650 ( 45) CTGACTCA 1 chr3:11347131-11347211 ( 31) CTGACTCA 1 chr22:29916942-29917022 ( 36) CTGACTCA 1 chr7:29597735-29597815 ( 32) CTGACTCA 1 chr12:115643258-11564333 ( 31) CTGACTCA 1 chr14:77490807-77490887 ( 65) CTGACTCA 1 chr1:92056895-92056975 ( 30) CTGACTCA 1 chr6:25898639-25898719 ( 45) CTGACTCA 1 chr7:105252455-105252535 ( 42) CTGACTCA 1 chr11:85884147-85884227 ( 37) CTGACTCA 1 chr11:86270402-86270482 ( 45) CTGACTCA 1 chr1:41281227-41281307 ( 28) CTGACTCA 1 chr1:112811178-112811258 ( 61) CTGACTCA 1 chr18:11661568-11661648 ( 66) CTGACTCA 1 chr4:144860871-144860951 ( 24) CTGACTCA 1 chr1:171449310-171449390 ( 41) CTGACTCA 1 chr1:145254410-145254490 ( 49) CTGACTCA 1 chr1:1617728-1617808 ( 52) CTGACTCA 1 chr11:94190479-94190559 ( 38) ATGAGTCA 1 chr2:190212415-190212495 ( 31) ATGAGTCA 1 chr17:43565247-43565327 ( 35) ATGAGTCA 1 chr8:62789477-62789557 ( 27) ATGAGTCA 1 chr5:84748484-84748564 ( 43) ATGAGTCA 1 chr6:83413907-83413987 ( 30) ATGAGTCA 1 chr6:91306826-91306906 ( 38) ATGAGTCA 1 chr3:15375306-15375386 ( 34) ATGAGTCA 1 chr7:101765459-101765539 ( 33) ATGAGTCA 1 chr5:148187701-148187781 ( 16) ATGAGTCA 1 chr12:53969389-53969469 ( 43) ATGAGTCA 1 chr6:52913332-52913412 ( 48) ATGAGTCA 1 chr15:39420196-39420276 ( 23) ATGAGTCA 1 chr10:44123540-44123620 ( 29) ATGAGTCA 1 chr8:80582353-80582433 ( 60) ATGAGTCA 1 chr22:22624816-22624896 ( 46) ATGAGTCA 1 chr2:178737180-178737260 ( 46) ATGAGTCA 1 chr3:107678839-107678919 ( 28) ATGAGTCA 1 chr7:112063095-112063175 ( 40) ATGACTCA 1 chr1:166644576-166644656 ( 43) ATGACTCA 1 chr9:132717315-132717395 ( 42) ATGACTCA 1 chr2:192815373-192815453 ( 37) ATGACTCA 1 chr2:8369878-8369958 ( 24) ATGACTCA 1 chr6:16342701-16342781 ( 27) ATGACTCA 1 chr9:33619731-33619811 ( 58) ATGACTCA 1 chr15:100781923-10078200 ( 59) ATGACTCA 1 chr15:96935728-96935808 ( 25) ATGACTCA 1 chr2:219828863-219828943 ( 45) ATGACTCA 1 chr2:169284045-169284125 ( 28) ATGACTCA 1 chr16:58213040-58213120 ( 43) ATGACTCA 1 chr12:65550254-65550334 ( 25) ATGACTCA 1 chr14:34934613-34934693 ( 28) ATGACTCA 1 chr4:8421286-8421366 ( 42) ATGACTCA 1 chr3:195648347-195648427 ( 28) ATGACTCA 1 chr7:32708890-32708970 ( 42) ATGACTCA 1 chr11:77892337-77892417 ( 23) ATGACTCA 1 chr1:196047993-196048073 ( 25) ATGACTCA 1 chr2:236080289-236080369 ( 11) ATGACTCA 1 chr18:1011493-1011573 ( 44) ATGACTCA 1 chr2:158913451-158913531 ( 31) ATGACTCA 1 chr18:413430-413510 ( 43) ATGACTCA 1 chr2:157302473-157302553 ( 45) ATGACTCA 1 chr15:58785340-58785420 ( 29) ATGACTCA 1 chr3:107613957-107614037 ( 41) ATGACTCA 1 chr12:27202145-27202225 ( 58) ATGACTCA 1 chr1:231644412-231644492 ( 32) ATGACTCA 1 chr3:40408461-40408541 ( 25) ATGACTCA 1 chr1:51914692-51914772 ( 45) ATGACTCA 1 chr2:25739777-25739857 ( 24) ATGACTCA 1 chr1:78469117-78469197 ( 44) CTGAATCA 1 chr10:74671687-74671767 ( 46) CTGAATCA 1 chr8:133982641-133982721 ( 29) CTGAATCA 1 chr4:3969103-3969183 ( 30) CTGAATCA 1 chr11:3458813-3458893 ( 32) CTGAATCA 1 chr6:157285343-157285423 ( 42) CTGAATCA 1 chr16:5161138-5161218 ( 42) CTGAATCA 1 chr2:74781898-74781978 ( 20) CAGAGTCA 1 chr12:16502082-16502162 ( 40) CAGAGTCA 1 chr10:13544490-13544570 ( 28) CAGAGTCA 1 chrX:40666284-40666364 ( 46) CAGAGTCA 1 chr5:1231781-1231861 ( 52) CAGACTCA 1 chr5:148181349-148181429 ( 47) CTGTGTCA 1 chr1:154452352-154452432 ( 27) CTGTGTCA 1 chr1:1511861-1511941 ( 39) CTGTGTCA 1 chr22:25125407-25125487 ( 43) CTGAGTAA 1 chr6:130012534-130012614 ( 44) CTGAGTAA 1 chr1:209969491-209969571 ( 36) CTGAGTCT 1 chr18:29171203-29171283 ( 45) CTGACTAA 1 chr6:137222473-137222553 ( 20) GTGAGTCA 1 chr1:101725408-101725488 ( 43) CTGACTAA 1 chr10:79291315-79291395 ( 34) GTGACTCA 1 chr1:114362519-114362599 ( 38) ATGAATCA 1 chr19:47494605-47494685 ( 45) CTGACACA 1 chr8:62632131-62632211 ( 14) CTGACACA 1 chr2:98294986-98295066 ( 45) GTGACTCA 1 chr18:60185827-60185907 ( 42) ATGAATCA 1 chr5:112386970-112387050 ( 6) ATGAATCA 1 chr7:5744188-5744268 ( 32) CTGACACA 1 chr1:48472925-48473005 ( 23) GTGACTCA 1 chr1:183951440-183951520 ( 70) GTGACTCA 1 chr16:2965542-2965622 ( 28) CTTAGTCA 1 chr5:39543655-39543735 ( 49) CTTAGTCA 1 chr3:142723830-142723910 ( 28) CTTACTCA 1 chr12:120667394-12066747 ( 48) CTGACTTA 1 chr8:57883583-57883663 ( 45) CTGACTTA 1 chr1:45072542-45072622 ( 7) CTGGCTCA 1 chr5:43353180-43353260 ( 28) CTGCCTCA 1 chr9:71393727-71393807 ( 29) CTAACTCA 1 chr5:134057603-134057683 ( 68) ATGAGTAA 1 chr1:244102686-244102766 ( 54) ATGACTAA 1 chr6:144399162-144399242 ( 25) ATGACACA 1 chr17:70562994-70563074 ( 4) ATGACTCT 1 chr1:24106676-24106756 ( 37) ATGACTCT 1 chr1:152140499-152140579 ( 7) CTGAGCCA 1 chr16:53113228-53113308 ( 46) ATGACTTA 1 chr11:71483360-71483440 ( 44) ATGATTCA 1 chr7:22369705-22369785 ( 38) ATGACTCG 1 chr4:9142911-9142991 ( 41) ATGATTCA 1 chr3:46152374-46152454 ( 50) CAGAATCA 1 chr8:8074015-8074095 ( 42) ATGATTCA 1 chr1:211904890-211904970 ( 30) CAGTGTCA 1 chr6:31441707-31441787 ( 45) CAGTGTCA 1 chr17:79936022-79936102 ( 27) CCGAGTCA 1 chr10:46998610-46998690 ( 52) CAGTGTCA 1 chr8:102150877-102150957 ( 38) CTGAATCT 1 chr1:47135961-47136041 ( 14) AGGAGTCA 1 chr9:94668296-94668376 ( 18) CAGAGTAA 1 chr3:142974734-142974814 ( 26) CTTAATCA 1 chr2:120075299-120075379 ( 14) GTGTGTCA 1 chr17:32740230-32740310 ( 32) CATAGTCA 1 chr8:11766705-11766785 ( 50) CTGAATGA 1 chr19:55836716-55836796 ( 23) CTGAGAAA 1 chr7:90877064-90877144 ( 16) CAGAGTGA 1 chr4:185368904-185368984 ( 52) AAGTGTCA 1 chr6:144585905-144585985 ( 31) CAGCGTCA 1 chr5:175823489-175823569 ( 31) CTTTGTCA 1 chr1:15256019-15256099 ( 20) CTGACAAA 1 chr9:130177601-130177681 ( 42) CTGTCTTA 1 chr4:178599217-178599297 ( 49) CAAAGTCA 1 chr8:9523484-9523564 ( 30) CAAAGTCA 1 chr8:101407849-101407929 ( 18) CTGTGTGA 1 chr7:73142462-73142542 ( 30) GTGACACA 1 chr22:17080711-17080791 ( 45) CTGACACT 1 chr6:83604625-83604705 ( 41) CTATGTCA 1 chr14:68622877-68622957 ( 37) CTATGTCA 1 chr4:87929059-87929139 ( 30) CTGAGTAG 1 chr3:186176590-186176670 ( 31) CTGACATA 1 chr1:100408855-100408935 ( 63) CTGAGTGT 1 chr5:79128949-79129029 ( 23) ATGAGTAT 1 chr1:167611614-167611694 ( 34) CTGCTTCA 1 chr14:96828445-96828525 ( 16) ATGTCTGA 1 chr6:7255371-7255451 ( 43) ATGACTAG 1 chr1:161509651-161509731 ( 65) CTGACCAA 1 chr20:51828730-51828810 ( 27) ATGACTTT 1 chr8:23204046-23204126 ( 2) ATGCCTAA 1 chr10:9373687-9373767 ( 60) ATAAGTCT 1 chr2:173955759-173955839 ( 41) ATGACTTG 1 chr6:37606615-37606695 ( 44) ATGACTTG 1 chr5:82267017-82267097 ( 58) ATTGGTCA 1 chr10:86285704-86285784 ( 64) ATTGGTCA 1 chr5:85919781-85919861 ( 19) CAGAATGA 1 chr5:137296686-137296766 ( 7) AGGAGACA 1 chr5:119086947-119087027 ( 32) CTCACTAA 1 chr6:4337418-4337498 ( 30) CTGACGTA 1 chr6:144605726-144605806 ( 25) AAAAATCA 1 chr8:41669945-41670025 ( 34) CATGGTCA 1 chr11:44192441-44192521 ( 72) CAGAAAAA 1 chr9:102858957-102859037 ( 68) CTTTATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.16993 E= 1.6e-292 6 166 -293 -1461 -186 -572 -473 167 -338 -572 212 -283 164 -372 -373 -225 -201 103 117 -415 -272 -472 -573 173 -218 205 -315 -298 169 -1461 -341 -283 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 250 E= 1.6e-292 0.304000 0.668000 0.028000 0.000000 0.080000 0.004000 0.008000 0.908000 0.028000 0.004000 0.928000 0.040000 0.908000 0.016000 0.016000 0.060000 0.072000 0.432000 0.480000 0.016000 0.044000 0.008000 0.004000 0.944000 0.064000 0.876000 0.024000 0.036000 0.940000 0.000000 0.020000 0.040000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGASTCA MEME-1 regular expression -------------------------------------------------------------------------------- [CA]TGA[GC]TCA -------------------------------------------------------------------------------- Time 4.76 secs. ******************************************************************************** ******************************************************************************** MOTIF ASTCAGCA MEME-2 width = 8 sites = 38 llr = 320 E-value = 2.8e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 71:2a::8 pos.-specific C 36:8::a1 probability G 13:::a:: matrix T ::a::::1 bits 2.2 ** 2.0 ** 1.8 * *** 1.6 ***** Relative 1.3 ***** Entropy 1.1 ***** (12.2 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACTCAGCA consensus CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:33619731-33619811 9 1.43e-05 atcccatg actcagca attccacttc chr1:45072542-45072622 27 1.43e-05 tagagtgcct actcagca ttttcacatg chr2:120075299-120075379 35 1.43e-05 CTTTTTGTCA ACTCAGCA CATTTTTTCT chr6:150189553-150189633 32 1.43e-05 AAACAAACTG ACTCAGCA AATCAACTCA chr17:53761034-53761114 12 1.43e-05 AGCTTTAGGG ACTCAGCA AAGAAGGCTG chr7:73189444-73189524 37 1.43e-05 ttaccatatg actcagca attttcgtct chr2:189191570-189191650 16 1.43e-05 CTTTGTGTAG ACTCAGCA CAGTTCTCCT chr6:25898639-25898719 10 1.43e-05 TCTtgaatc actcagca tgtttttgac chr1:112811178-112811258 24 1.43e-05 GATAATGCAA ACTCAGCA ACCCTTATCT chr16:2965542-2965622 60 2.86e-05 ATTAGGTTCC AGTCAGCA ATTTTtaaaa chr17:79689675-79689755 31 2.86e-05 GACCCTGCTG AGTCAGCA TTTCAGCAGT chr1:196047993-196048073 8 2.86e-05 AGAATGA AGTCAGCA TTATGAACTA chr5:112386970-112387050 49 2.86e-05 AAAAAGTAAG AGTCAGCA TTTACAAGAA chr5:1231781-1231861 33 2.86e-05 AAACATGCTC AGTCAGCA CTTTATTTCT chr18:1011493-1011573 12 3.90e-05 GTGTATGATC CCTCAGCA CATGGTTCAG chr1:15256019-15256099 35 4.94e-05 AAAAATGGAA CGTCAGCA CATTTGCATG chr6:144605726-144605806 37 4.94e-05 AAATCAGCAA CGTCAGCA AACTGAGATG chr1:183951440-183951520 47 4.94e-05 AAAAGTGCAA CGTCAGCA AAAGTCACAT chr15:100781923-10078200 19 5.98e-05 CCTAACCATG ACTCAGCC TTTCCTAACC chr12:95618460-95618540 13 5.98e-05 ccacttgatt actcagcc agtggaacat chr1:244102686-244102766 29 1.13e-04 AGATAGCATG ACTAAGCA TTCTTCTTCC chr7:105252455-105252535 56 1.13e-04 CTCAGCATTT ACTAAGCA TTTCCTACAG chr18:11661568-11661648 35 1.13e-04 gaaactgctg actcagct ggtctgaagg chr2:178737180-178737260 32 1.13e-04 AGTGAAAGAC ACTAAGCA GAAGTGATGA chr5:82267017-82267097 33 1.13e-04 gtttttgcct aatcagca ttttagtgag chr10:86285704-86285784 30 1.13e-04 gtttttgcct aatcagca ttttagtgag chr21:33504406-33504486 42 1.23e-04 TGAGTCATCC AGTCAGCC TCAGCCCAAA chr18:60185827-60185907 4 1.34e-04 ACA GCTCAGCA AATTTGATGT chr10:79291315-79291395 51 1.41e-04 agcacacatc cctcagcc ctccaaggaa chr1:209969491-209969571 20 1.75e-04 CATTCCCCTA AGTAAGCA AGATTTTGCT chr6:89079995-89080075 62 1.75e-04 AGCACTGCTT AGTAAGCA CTGCTTCAGA chr2:68515228-68515308 28 1.75e-04 CTTTTTGTTG AGTCAGCT CATTTTCCCT chr2:219828863-219828943 61 2.14e-04 CAGCAATTCC CCTAAGCA AAGGGCTGGA chr1:161509651-161509731 33 2.14e-04 AAGTTGTCTA CATCAGCA AAAAAAGCTT chr8:101407849-101407929 45 2.14e-04 agttttttca catcagca atttcagtgt chr9:102858957-102859037 41 2.14e-04 AAAATGATGA CCTCAGCT AAATGGGAAC chr7:135540768-135540848 66 2.14e-04 TCAAAATGAT CCTCAGCT GTGTCAT chr3:181500217-181500297 7 2.24e-04 ttgcct ggtcagca ttagggttta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:33619731-33619811 1.4e-05 8_[+2]_64 chr1:45072542-45072622 1.4e-05 26_[+2]_46 chr2:120075299-120075379 1.4e-05 34_[+2]_38 chr6:150189553-150189633 1.4e-05 31_[+2]_41 chr17:53761034-53761114 1.4e-05 11_[+2]_61 chr7:73189444-73189524 1.4e-05 36_[+2]_36 chr2:189191570-189191650 1.4e-05 15_[+2]_57 chr6:25898639-25898719 1.4e-05 9_[+2]_63 chr1:112811178-112811258 1.4e-05 23_[+2]_49 chr16:2965542-2965622 2.9e-05 59_[+2]_13 chr17:79689675-79689755 2.9e-05 30_[+2]_42 chr1:196047993-196048073 2.9e-05 7_[+2]_65 chr5:112386970-112387050 2.9e-05 48_[+2]_24 chr5:1231781-1231861 2.9e-05 32_[+2]_40 chr18:1011493-1011573 3.9e-05 11_[+2]_61 chr1:15256019-15256099 4.9e-05 34_[+2]_38 chr6:144605726-144605806 4.9e-05 36_[+2]_36 chr1:183951440-183951520 4.9e-05 46_[+2]_26 chr15:100781923-10078200 6e-05 18_[+2]_54 chr12:95618460-95618540 6e-05 12_[+2]_60 chr1:244102686-244102766 0.00011 28_[+2]_44 chr7:105252455-105252535 0.00011 55_[+2]_17 chr18:11661568-11661648 0.00011 34_[+2]_38 chr2:178737180-178737260 0.00011 31_[+2]_41 chr5:82267017-82267097 0.00011 32_[+2]_40 chr10:86285704-86285784 0.00011 29_[+2]_43 chr21:33504406-33504486 0.00012 41_[+2]_31 chr18:60185827-60185907 0.00013 3_[+2]_69 chr10:79291315-79291395 0.00014 50_[+2]_22 chr1:209969491-209969571 0.00017 19_[+2]_53 chr6:89079995-89080075 0.00017 61_[+2]_11 chr2:68515228-68515308 0.00017 27_[+2]_45 chr2:219828863-219828943 0.00021 60_[+2]_12 chr1:161509651-161509731 0.00021 32_[+2]_40 chr8:101407849-101407929 0.00021 44_[+2]_28 chr9:102858957-102859037 0.00021 40_[+2]_32 chr7:135540768-135540848 0.00021 65_[+2]_7 chr3:181500217-181500297 0.00022 6_[+2]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ASTCAGCA width=8 seqs=38 chr9:33619731-33619811 ( 9) ACTCAGCA 1 chr1:45072542-45072622 ( 27) ACTCAGCA 1 chr2:120075299-120075379 ( 35) ACTCAGCA 1 chr6:150189553-150189633 ( 32) ACTCAGCA 1 chr17:53761034-53761114 ( 12) ACTCAGCA 1 chr7:73189444-73189524 ( 37) ACTCAGCA 1 chr2:189191570-189191650 ( 16) ACTCAGCA 1 chr6:25898639-25898719 ( 10) ACTCAGCA 1 chr1:112811178-112811258 ( 24) ACTCAGCA 1 chr16:2965542-2965622 ( 60) AGTCAGCA 1 chr17:79689675-79689755 ( 31) AGTCAGCA 1 chr1:196047993-196048073 ( 8) AGTCAGCA 1 chr5:112386970-112387050 ( 49) AGTCAGCA 1 chr5:1231781-1231861 ( 33) AGTCAGCA 1 chr18:1011493-1011573 ( 12) CCTCAGCA 1 chr1:15256019-15256099 ( 35) CGTCAGCA 1 chr6:144605726-144605806 ( 37) CGTCAGCA 1 chr1:183951440-183951520 ( 47) CGTCAGCA 1 chr15:100781923-10078200 ( 19) ACTCAGCC 1 chr12:95618460-95618540 ( 13) ACTCAGCC 1 chr1:244102686-244102766 ( 29) ACTAAGCA 1 chr7:105252455-105252535 ( 56) ACTAAGCA 1 chr18:11661568-11661648 ( 35) ACTCAGCT 1 chr2:178737180-178737260 ( 32) ACTAAGCA 1 chr5:82267017-82267097 ( 33) AATCAGCA 1 chr10:86285704-86285784 ( 30) AATCAGCA 1 chr21:33504406-33504486 ( 42) AGTCAGCC 1 chr18:60185827-60185907 ( 4) GCTCAGCA 1 chr10:79291315-79291395 ( 51) CCTCAGCC 1 chr1:209969491-209969571 ( 20) AGTAAGCA 1 chr6:89079995-89080075 ( 62) AGTAAGCA 1 chr2:68515228-68515308 ( 28) AGTCAGCT 1 chr2:219828863-219828943 ( 61) CCTAAGCA 1 chr1:161509651-161509731 ( 33) CATCAGCA 1 chr8:101407849-101407929 ( 45) CATCAGCA 1 chr9:102858957-102859037 ( 41) CCTCAGCT 1 chr7:135540768-135540848 ( 66) CCTCAGCT 1 chr3:181500217-181500297 ( 7) GGTCAGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.3471 E= 2.8e-006 123 31 -201 -1189 -147 138 68 -1189 -1189 -1189 -1189 181 -88 199 -1189 -1189 178 -1189 -1189 -1189 -1189 -1189 223 -1189 -1189 224 -1189 -1189 144 -101 -1189 -143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 38 E= 2.8e-006 0.684211 0.263158 0.052632 0.000000 0.105263 0.552632 0.342105 0.000000 0.000000 0.000000 0.000000 1.000000 0.157895 0.842105 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.789474 0.105263 0.000000 0.105263 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ASTCAGCA MEME-2 regular expression -------------------------------------------------------------------------------- [AC][CG]TCAGCA -------------------------------------------------------------------------------- Time 8.12 secs. ******************************************************************************** ******************************************************************************** MOTIF KCANTTYY MEME-3 width = 8 sites = 48 llr = 363 E-value = 6.0e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a2:::: pos.-specific C :a:3::65 probability G 6::3:::: matrix T 4::3aa45 bits 2.2 * 2.0 * 1.8 ** ** 1.6 ** ** Relative 1.3 ** ** Entropy 1.1 *** **** (10.9 bits) 0.9 *** **** 0.7 *** **** 0.4 *** **** 0.2 *** **** 0.0 -------- Multilevel GCAGTTCT consensus T C TC sequence T A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:8421286-8421366 7 1.02e-05 agtgtg gcagttcc acaagtgatt chr7:112063095-112063175 48 2.04e-05 GGATGACTCA GCACTTCC TATTGTTGTG chr6:137222473-137222553 52 3.41e-05 acacacccta gcagttct tcttttggtc chr2:25739777-25739857 32 3.41e-05 gcatgactca gcagttct actcccagat chr8:133982641-133982721 37 6.15e-05 tgctgaatca gcatttcc tgggatggag chr1:145254410-145254490 57 6.15e-05 GGCTGACTCA GCATTTCC CCCTTTCCTT chr6:16342701-16342781 35 7.54e-05 acatgactca gcaattcc acgtctggat chr9:33619731-33619811 66 7.54e-05 acatgactca gcaattcc actccta chr2:219828863-219828943 53 7.54e-05 CAATGACTCA GCAATTCC CCTAAGCAAA chr2:157302473-157302553 53 7.54e-05 ttatgactca gcaattcc ttagggcttt chr15:39420196-39420276 31 7.54e-05 TCATGAGTCA GCAATTCC TGCATTAGAG chr6:144399162-144399242 33 9.38e-05 tgatgacaca gcatttct taaaagactt chr2:190212415-190212495 39 9.38e-05 TGATGAGTCA GCATTTCT GGAACTCCTG chr8:62789477-62789557 35 9.38e-05 GCATGAGTCA GCATTTCT TGCTTCATCC chr6:83413907-83413987 38 1.26e-04 TGATGAGTCA TCAGTTCC TAGCAGTGGT chr3:15375306-15375386 42 1.26e-04 GGATGAGTCA GCAATTCT GTGAGAGGTG chr1:101725408-101725488 25 1.26e-04 AATGCTTGAT GCAATTCT ATTAGAAGTG chr15:63712812-63712892 31 1.54e-04 gtacaccatc tcacttcc attttccgct chr12:65550254-65550334 43 1.54e-04 gcatttattt tcacttcc tttgagtgtg chr1:16092444-16092524 18 1.54e-04 CCTCTTTCTC TCACTTCC GCTGAGTCAG chr10:9373687-9373767 47 1.54e-04 TGCTGACTAC GCAGTTTC TAAAAATAAG chr18:413430-413510 8 1.54e-04 tagtttg gcagtttc taaaacaatg chr6:130012534-130012614 73 1.54e-04 CTAATAAAAT TCACTTCC chr15:100781923-10078200 42 1.86e-04 TAACCATGAT TCAGTTCT TGTCTAACCA chr19:55836716-55836796 40 1.86e-04 AGATGACGTT GCACTTTC ATATTGAGGA chr1:24106676-24106756 45 2.22e-04 TGATGACTCT GCAGTTTT CTTAATAACT chr2:158913451-158913531 2 2.22e-04 g gcagtttt tcagatttcc chr1:1511861-1511941 6 2.22e-04 ttttg tcacttct gtagtctttc chr10:7998613-7998693 49 2.59e-04 TGATTTCACA TCATTTCC CTTTTTGGAC chr17:79689675-79689755 67 2.59e-04 GAGTCAGCAG TCATTTCC GTGCTT chr16:66492037-66492117 35 2.59e-04 TGCTGAGTCA GCACTTTT GCGTCTCTGT chr17:79936022-79936102 41 2.59e-04 GTCACTCACT GCACTTTT ACTTGGGCAC chr7:73142462-73142542 38 2.59e-04 gtgtgacaca gcactttt tgagctcatt chr5:79128949-79129029 50 2.59e-04 tgatgaccaa gcactttt gaaaggtgta chr17:27685056-27685136 15 3.39e-04 tcatatattt tcatttct cttgagcagt chr3:34098461-34098541 13 3.39e-04 aaatgtgttt tcatttct cttgagtagt chr18:1037104-1037184 40 3.39e-04 acctgactca gcaatttc tagctcaggt chr8:62632131-62632211 63 3.39e-04 ACTCTATTCT GCAATTTC ATAACCACAT chr6:37606615-37606695 63 3.39e-04 AAATTTTCTT TCATTTCT TTCCTGCCCT chr1:114362519-114362599 46 3.89e-04 TCATGAATCA GCATTTTT TTGTTTTTTT chr1:154452352-154452432 5 3.89e-04 AAGG GCATTTTT CAAGATGGCA chr7:5744188-5744268 4 3.89e-04 GTG TCAATTCT GCTTACAAAA chr3:142974734-142974814 17 3.89e-04 AGGACTTAAT TCAATTCT GCTTAATCAG chr5:84748484-84748564 51 4.33e-04 gaatgagtca tcagtttc ttgttttcta chr7:101765459-101765539 41 4.33e-04 TGATGAGTCA TCAGTTTC CAGTACGAGT chr3:107613957-107614037 55 4.76e-04 CTCAGTGTTT TCAGTTTT GTTTGAGTGA chr11:35327498-35327578 45 4.76e-04 AGCTGAGTCA TCAGTTTT CTGAAAAGGG chr14:68622877-68622957 45 5.00e-04 TGCTATGTCA TCACTTTT TTTGTGTGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:8421286-8421366 1e-05 6_[+3]_66 chr7:112063095-112063175 2e-05 47_[+3]_25 chr6:137222473-137222553 3.4e-05 51_[+3]_21 chr2:25739777-25739857 3.4e-05 31_[+3]_41 chr8:133982641-133982721 6.1e-05 36_[+3]_36 chr1:145254410-145254490 6.1e-05 56_[+3]_16 chr6:16342701-16342781 7.5e-05 34_[+3]_38 chr9:33619731-33619811 7.5e-05 65_[+3]_7 chr2:219828863-219828943 7.5e-05 52_[+3]_20 chr2:157302473-157302553 7.5e-05 52_[+3]_20 chr15:39420196-39420276 7.5e-05 30_[+3]_42 chr6:144399162-144399242 9.4e-05 32_[+3]_40 chr2:190212415-190212495 9.4e-05 38_[+3]_34 chr8:62789477-62789557 9.4e-05 34_[+3]_38 chr6:83413907-83413987 0.00013 37_[+3]_35 chr3:15375306-15375386 0.00013 41_[+3]_31 chr1:101725408-101725488 0.00013 24_[+3]_48 chr15:63712812-63712892 0.00015 30_[+3]_42 chr12:65550254-65550334 0.00015 42_[+3]_30 chr1:16092444-16092524 0.00015 17_[+3]_55 chr10:9373687-9373767 0.00015 46_[+3]_26 chr18:413430-413510 0.00015 7_[+3]_65 chr6:130012534-130012614 0.00015 72_[+3] chr15:100781923-10078200 0.00019 41_[+3]_31 chr19:55836716-55836796 0.00019 39_[+3]_33 chr1:24106676-24106756 0.00022 44_[+3]_28 chr2:158913451-158913531 0.00022 1_[+3]_71 chr1:1511861-1511941 0.00022 5_[+3]_67 chr10:7998613-7998693 0.00026 48_[+3]_24 chr17:79689675-79689755 0.00026 66_[+3]_6 chr16:66492037-66492117 0.00026 34_[+3]_38 chr17:79936022-79936102 0.00026 40_[+3]_32 chr7:73142462-73142542 0.00026 37_[+3]_35 chr5:79128949-79129029 0.00026 49_[+3]_23 chr17:27685056-27685136 0.00034 14_[+3]_58 chr3:34098461-34098541 0.00034 12_[+3]_60 chr18:1037104-1037184 0.00034 39_[+3]_33 chr8:62632131-62632211 0.00034 62_[+3]_10 chr6:37606615-37606695 0.00034 62_[+3]_10 chr1:114362519-114362599 0.00039 45_[+3]_27 chr1:154452352-154452432 0.00039 4_[+3]_68 chr7:5744188-5744268 0.00039 3_[+3]_69 chr3:142974734-142974814 0.00039 16_[+3]_56 chr5:84748484-84748564 0.00043 50_[+3]_22 chr7:101765459-101765539 0.00043 40_[+3]_32 chr3:107613957-107614037 0.00048 54_[+3]_18 chr11:35327498-35327578 0.00048 44_[+3]_28 chr14:68622877-68622957 0.0005 44_[+3]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KCANTTYY width=8 seqs=48 chr4:8421286-8421366 ( 7) GCAGTTCC 1 chr7:112063095-112063175 ( 48) GCACTTCC 1 chr6:137222473-137222553 ( 52) GCAGTTCT 1 chr2:25739777-25739857 ( 32) GCAGTTCT 1 chr8:133982641-133982721 ( 37) GCATTTCC 1 chr1:145254410-145254490 ( 57) GCATTTCC 1 chr6:16342701-16342781 ( 35) GCAATTCC 1 chr9:33619731-33619811 ( 66) GCAATTCC 1 chr2:219828863-219828943 ( 53) GCAATTCC 1 chr2:157302473-157302553 ( 53) GCAATTCC 1 chr15:39420196-39420276 ( 31) GCAATTCC 1 chr6:144399162-144399242 ( 33) GCATTTCT 1 chr2:190212415-190212495 ( 39) GCATTTCT 1 chr8:62789477-62789557 ( 35) GCATTTCT 1 chr6:83413907-83413987 ( 38) TCAGTTCC 1 chr3:15375306-15375386 ( 42) GCAATTCT 1 chr1:101725408-101725488 ( 25) GCAATTCT 1 chr15:63712812-63712892 ( 31) TCACTTCC 1 chr12:65550254-65550334 ( 43) TCACTTCC 1 chr1:16092444-16092524 ( 18) TCACTTCC 1 chr10:9373687-9373767 ( 47) GCAGTTTC 1 chr18:413430-413510 ( 8) GCAGTTTC 1 chr6:130012534-130012614 ( 73) TCACTTCC 1 chr15:100781923-10078200 ( 42) TCAGTTCT 1 chr19:55836716-55836796 ( 40) GCACTTTC 1 chr1:24106676-24106756 ( 45) GCAGTTTT 1 chr2:158913451-158913531 ( 2) GCAGTTTT 1 chr1:1511861-1511941 ( 6) TCACTTCT 1 chr10:7998613-7998693 ( 49) TCATTTCC 1 chr17:79689675-79689755 ( 67) TCATTTCC 1 chr16:66492037-66492117 ( 35) GCACTTTT 1 chr17:79936022-79936102 ( 41) GCACTTTT 1 chr7:73142462-73142542 ( 38) GCACTTTT 1 chr5:79128949-79129029 ( 50) GCACTTTT 1 chr17:27685056-27685136 ( 15) TCATTTCT 1 chr3:34098461-34098541 ( 13) TCATTTCT 1 chr18:1037104-1037184 ( 40) GCAATTTC 1 chr8:62632131-62632211 ( 63) GCAATTTC 1 chr6:37606615-37606695 ( 63) TCATTTCT 1 chr1:114362519-114362599 ( 46) GCATTTTT 1 chr1:154452352-154452432 ( 5) GCATTTTT 1 chr7:5744188-5744268 ( 4) TCAATTCT 1 chr3:142974734-142974814 ( 17) TCAATTCT 1 chr5:84748484-84748564 ( 51) TCAGTTTC 1 chr7:101765459-101765539 ( 41) TCAGTTTC 1 chr3:107613957-107614037 ( 55) TCAGTTTT 1 chr11:35327498-35327578 ( 45) TCAGTTTT 1 chr14:68622877-68622957 ( 45) TCACTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.66841 E= 6.0e+001 -1223 -1223 150 48 -1223 224 -1223 -1223 178 -1223 -1223 -1223 -34 24 35 -19 -1223 -1223 -1223 181 -1223 -1223 -1223 181 -1223 156 -1223 40 -1223 118 -1223 87 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 48 E= 6.0e+001 0.000000 0.000000 0.604167 0.395833 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.229167 0.250000 0.270833 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.625000 0.000000 0.375000 0.000000 0.479167 0.000000 0.520833 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KCANTTYY MEME-3 regular expression -------------------------------------------------------------------------------- [GT]CA[GCTA]TT[CT][TC] -------------------------------------------------------------------------------- Time 11.37 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCGGGCC MEME-4 width = 8 sites = 2 llr = 25 E-value = 1.3e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C aaa:::aa probability G :::aaa:: matrix T :::::::: bits 2.2 ******** 2.0 ******** 1.8 ******** 1.6 ******** Relative 1.3 ******** Entropy 1.1 ******** (17.9 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCCGGGCC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:16092444-16092524 47 4.14e-06 AGCAGCATCA CCCGGGCC TGTACCAACA chr6:39174231-39174311 63 4.14e-06 ACCTTCCCAT CCCGGGCC AATGACCTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:16092444-16092524 4.1e-06 46_[+4]_26 chr6:39174231-39174311 4.1e-06 62_[+4]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCGGGCC width=8 seqs=2 chr1:16092444-16092524 ( 47) CCCGGGCC 1 chr6:39174231-39174311 ( 63) CCCGGGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.3e+004 -765 223 -765 -765 -765 223 -765 -765 -765 223 -765 -765 -765 -765 223 -765 -765 -765 223 -765 -765 -765 223 -765 -765 223 -765 -765 -765 223 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.3e+004 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCGGGCC MEME-4 regular expression -------------------------------------------------------------------------------- CCCGGGCC -------------------------------------------------------------------------------- Time 14.56 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTTTTTG MEME-5 width = 8 sites = 7 llr = 74 E-value = 2.1e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G :a:::::a matrix T a:aaaaa: bits 2.2 * * 2.0 * * 1.8 ******** 1.6 ******** Relative 1.3 ******** Entropy 1.1 ******** (15.3 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGTTTTTG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:2965542-2965622 14 2.43e-05 TCTAGGGCAC TGTTTTTG AAACTGCTTA chr3:142723830-142723910 5 2.43e-05 ttaC TGTTTTTG ACTGTCAATT chr6:25898639-25898719 18 2.43e-05 tcactcagca tgtttttg actgcaggta chr1:41281227-41281307 20 2.43e-05 CCGTACCCCG TGTTTTTG CTGACTCAGC chr2:218296756-218296836 21 2.43e-05 AATGTCACTG TGTTTTTG CTGAGTCATG chr5:82267017-82267097 22 2.43e-05 ctttacctcc tgtttttg cctaatcagc chr10:86285704-86285784 19 2.43e-05 ctttaccttc tgtttttg cctaatcagc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:2965542-2965622 2.4e-05 13_[+5]_59 chr3:142723830-142723910 2.4e-05 4_[+5]_68 chr6:25898639-25898719 2.4e-05 17_[+5]_55 chr1:41281227-41281307 2.4e-05 19_[+5]_53 chr2:218296756-218296836 2.4e-05 20_[+5]_52 chr5:82267017-82267097 2.4e-05 21_[+5]_51 chr10:86285704-86285784 2.4e-05 18_[+5]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTTTTTG width=8 seqs=7 chr16:2965542-2965622 ( 14) TGTTTTTG 1 chr3:142723830-142723910 ( 5) TGTTTTTG 1 chr6:25898639-25898719 ( 18) TGTTTTTG 1 chr1:41281227-41281307 ( 20) TGTTTTTG 1 chr2:218296756-218296836 ( 21) TGTTTTTG 1 chr5:82267017-82267097 ( 22) TGTTTTTG 1 chr10:86285704-86285784 ( 19) TGTTTTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.1915 E= 2.1e+004 -945 -945 -945 181 -945 -945 223 -945 -945 -945 -945 181 -945 -945 -945 181 -945 -945 -945 181 -945 -945 -945 181 -945 -945 -945 181 -945 -945 223 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 7 E= 2.1e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTTTTTG MEME-5 regular expression -------------------------------------------------------------------------------- TGTTTTTG -------------------------------------------------------------------------------- Time 17.76 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:5161138-5161218 2.70e-02 41_[+1(8.56e-05)]_31 chr11:35327498-35327578 3.24e-03 36_[+1(1.40e-05)]_36 chr6:157285343-157285423 1.25e-02 41_[+1(8.56e-05)]_31 chr8:8074015-8074095 6.90e-02 80 chr1:174397296-174397376 3.94e-02 27_[+1(1.40e-05)]_45 chr1:183951440-183951520 3.29e-03 46_[+2(4.94e-05)]_26 chr5:39543655-39543735 2.43e-01 80 chr9:94668296-94668376 4.13e-01 80 chr3:107678839-107678919 2.32e-02 27_[+1(4.72e-05)]_45 chr3:46152374-46152454 1.39e-01 80 chr4:9142911-9142991 6.67e-02 80 chr11:3458813-3458893 2.70e-02 31_[+1(8.56e-05)]_41 chr6:130012534-130012614 1.33e-03 80 chr1:1617728-1617808 9.07e-03 51_[+1(2.80e-05)]_21 chr1:145254410-145254490 1.04e-05 51_[+2(1.43e-05)]_21 chr2:25739777-25739857 6.58e-05 26_[+2(1.43e-05)]_46 chr3:4305861-4305941 3.84e-04 47_[+1(1.40e-05)]_25 chr7:135540768-135540848 2.95e-03 26_[+1(1.40e-05)]_46 chr10:86285704-86285784 2.53e-03 18_[+5(2.43e-05)]_54 chr10:46998610-46998690 3.99e-01 80 chr5:1231781-1231861 1.28e-03 32_[+2(2.86e-05)]_40 chr5:175823489-175823569 5.48e-01 80 chr5:82267017-82267097 2.53e-03 21_[+5(2.43e-05)]_51 chr2:218296756-218296836 6.71e-04 20_[+5(2.43e-05)]_[+1(1.40e-05)]_44 chr2:178737180-178737260 6.98e-03 48_[+2(2.86e-05)]_24 chr7:3186640-3186720 2.70e-02 11_[+1(1.40e-05)]_61 chr1:171449310-171449390 2.69e-02 40_[+1(2.80e-05)]_32 chr7:22369705-22369785 7.34e-01 80 chr2:68515228-68515308 3.76e-04 43_[+1(1.40e-05)]_29 chr1:101725408-101725488 2.11e-02 80 chrX:40666284-40666364 3.30e-03 48_[+2(2.86e-05)]_24 chr1:48472925-48473005 1.07e-02 25_[+2(1.43e-05)]_47 chr4:40675038-40675118 5.51e-02 48_[+1(1.40e-05)]_24 chr4:87929059-87929139 5.85e-01 80 chr4:144860871-144860951 7.23e-04 26_[+2(1.43e-05)]_46 chr18:11661568-11661648 3.11e-03 31_[+1(2.80e-05)]_26_[+1(2.80e-05)]_\ 7 chr12:95618460-95618540 2.21e-03 12_[+2(5.98e-05)]_23_[+1(1.40e-05)]_\ 29 chr22:17080711-17080791 5.96e-01 80 chr6:89079995-89080075 1.87e-04 44_[+1(1.40e-05)]_28 chr1:112811178-112811258 2.32e-03 23_[+2(1.43e-05)]_32_[+2(1.43e-05)]_\ 9 chr14:68622877-68622957 4.93e-02 80 chr4:3969103-3969183 3.65e-02 29_[+1(8.56e-05)]_43 chr3:142974734-142974814 1.43e-02 80 chr22:22624816-22624896 4.30e-02 45_[+1(4.72e-05)]_27 chr1:41281227-41281307 4.14e-06 19_[+5(2.43e-05)]_[+1(2.80e-05)]_45 chr3:159745742-159745822 9.59e-03 30_[+1(1.40e-05)]_42 chr8:11766705-11766785 3.15e-01 80 chr11:86270402-86270482 1.26e-03 44_[+1(2.80e-05)]_28 chr1:47135961-47136041 1.20e-01 80 chr1:51914692-51914772 1.80e-03 47_[+2(1.43e-05)]_25 chr3:181500217-181500297 2.24e-03 45_[+1(1.40e-05)]_27 chr8:41669945-41670025 4.51e-01 80 chr5:79128949-79129029 5.30e-02 80 chr9:102858957-102859037 2.59e-01 80 chr3:40408461-40408541 8.21e-05 27_[+2(1.43e-05)]_45 chr7:73142462-73142542 9.05e-03 80 chr1:1511861-1511941 3.22e-03 80 chr1:152140499-152140579 8.15e-02 80 chr6:37606615-37606695 1.17e-01 80 chr7:5744188-5744268 4.61e-02 80 chr8:121096935-121097015 3.32e-04 42_[+1(1.40e-05)]_30 chr5:112386970-112387050 5.40e-03 48_[+2(2.86e-05)]_24 chr8:80582353-80582433 1.85e-02 59_[+1(4.72e-05)]_13 chr8:9523484-9523564 4.61e-01 80 chr11:85884147-85884227 4.18e-04 39_[+2(1.43e-05)]_33 chr2:173955759-173955839 2.16e-01 80 chr6:144585905-144585985 2.89e-01 80 chr7:105252455-105252535 4.00e-05 44_[+2(1.43e-05)]_8_[+3(6.15e-05)]_\ 12 chr10:44123540-44123620 8.38e-02 28_[+1(4.72e-05)]_44 chr21:33504406-33504486 6.34e-03 30_[+1(1.40e-05)]_42 chr20:51828730-51828810 5.50e-01 80 chr5:119086947-119087027 8.59e-01 80 chr11:44192441-44192521 7.43e-01 80 chr1:167611614-167611694 2.14e-02 80 chr15:39420196-39420276 1.35e-05 25_[+2(2.86e-05)]_47 chr8:57883583-57883663 1.82e-01 80 chr6:25898639-25898719 1.22e-05 9_[+2(1.43e-05)]_[+5(2.43e-05)]_19_\ [+1(2.80e-05)]_28 chr1:92056895-92056975 4.07e-02 29_[+1(2.80e-05)]_43 chr10:13544490-13544570 1.26e-02 30_[+2(2.86e-05)]_42 chr6:52913332-52913412 4.09e-02 47_[+1(4.72e-05)]_25 chr14:77490807-77490887 2.94e-02 64_[+1(2.80e-05)]_8 chr4:185368904-185368984 4.92e-01 80 chr1:231644412-231644492 7.83e-02 31_[+1(6.64e-05)]_41 chr12:27202145-27202225 3.99e-04 60_[+2(1.43e-05)]_12 chr3:107613957-107614037 1.53e-02 40_[+1(6.64e-05)]_32 chr7:90877064-90877144 4.57e-01 80 chr11:66603342-66603422 6.42e-02 50_[+1(1.40e-05)]_22 chr5:106801951-106802031 5.07e-02 46_[+1(1.40e-05)]_26 chr12:120667394-12066747 1.18e-01 80 chr15:58785340-58785420 1.95e-03 31_[+2(1.43e-05)]_41 chr12:115643258-11564333 2.88e-04 33_[+2(1.43e-05)]_39 chr12:53969389-53969469 1.01e-03 45_[+2(2.86e-05)]_27 chr18:60185827-60185907 1.85e-02 80 chr4:178599217-178599297 1.23e-02 51_[+2(2.86e-05)]_21 chr2:157302473-157302553 9.34e-05 47_[+2(1.43e-05)]_25 chr11:124351500-12435158 6.32e-02 27_[+1(1.40e-05)]_45 chr6:137222473-137222553 9.47e-05 22_[+2(2.86e-05)]_21_[+3(3.41e-05)]_\ 21 chr6:4337418-4337498 7.56e-01 80 chr20:48955107-48955187 8.71e-04 35_[+1(1.40e-05)]_37 chr18:413430-413510 2.14e-04 45_[+2(1.43e-05)]_27 chr8:133982641-133982721 4.76e-04 28_[+1(8.56e-05)]_[+3(6.15e-05)]_36 chr1:233041233-233041313 5.94e-04 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******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n05.farnam.hpc.yale.internal ********************************************************************************