******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/LEF1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr1:16488963-16489043 1.0000 80 chr1:165840821-165840901 1.0000 80 chr5:71528314-71528394 1.0000 80 chr14:54953532-54953612 1.0000 80 chr5:112025421-112025501 1.0000 80 chr16:55657091-55657171 1.0000 80 chr11:74724352-74724432 1.0000 80 chr2:100101996-100102076 1.0000 80 chr15:66083707-66083787 1.0000 80 chr10:77054704-77054784 1.0000 80 chr10:103584601-10358468 1.0000 80 chr1:206554483-206554563 1.0000 80 chr8:144021574-144021654 1.0000 80 chr14:21267650-21267730 1.0000 80 chr15:81457010-81457090 1.0000 80 chr15:44975572-44975652 1.0000 80 chr9:32884611-32884691 1.0000 80 chr1:206939735-206939815 1.0000 80 chr9:126817198-126817278 1.0000 80 chr1:169307969-169308049 1.0000 80 chr11:5831765-5831845 1.0000 80 chr11:4680324-4680404 1.0000 80 chr10:43149980-43150060 1.0000 80 chr7:127460476-127460556 1.0000 80 chr5:88429145-88429225 1.0000 80 chr1:39853306-39853386 1.0000 80 chr19:49540218-49540298 1.0000 80 chr21:43472041-43472121 1.0000 80 chr17:46297151-46297231 1.0000 80 chr11:56894378-56894458 1.0000 80 chr1:220474183-220474263 1.0000 80 chr10:101380345-10138042 1.0000 80 chr6:42104753-42104833 1.0000 80 chr17:7236210-7236290 1.0000 80 chr1:174277880-174277960 1.0000 80 chr7:43774517-43774597 1.0000 80 chr5:127374471-127374551 1.0000 80 chr17:25873067-25873147 1.0000 80 chr1:162391199-162391279 1.0000 80 chr1:24136370-24136450 1.0000 80 chr7:135335795-135335875 1.0000 80 chr10:44729189-44729269 1.0000 80 chr1:211546042-211546122 1.0000 80 chr1:182838525-182838605 1.0000 80 chr1:117724413-117724493 1.0000 80 chr6:18269784-18269864 1.0000 80 chr14:101909002-10190908 1.0000 80 chr16:84077216-84077296 1.0000 80 chr10:25186410-25186490 1.0000 80 chr17:6950417-6950497 1.0000 80 chr19:59096082-59096162 1.0000 80 chr19:15955426-15955506 1.0000 80 chr6:70874662-70874742 1.0000 80 chr3:12797396-12797476 1.0000 80 chr19:7717092-7717172 1.0000 80 chr15:38730428-38730508 1.0000 80 chr8:125595665-125595745 1.0000 80 chr6:3410153-3410233 1.0000 80 chr2:172911002-172911082 1.0000 80 chr6:18269584-18269664 1.0000 80 chr12:12186487-12186567 1.0000 80 chr1:172688315-172688395 1.0000 80 chr11:119312104-11931218 1.0000 80 chr19:47132444-47132524 1.0000 80 chr21:40794560-40794640 1.0000 80 chr11:297922-298002 1.0000 80 chr11:43769150-43769230 1.0000 80 chr16:12130968-12131048 1.0000 80 chr1:59892989-59893069 1.0000 80 chr2:196195371-196195451 1.0000 80 chr2:112191566-112191646 1.0000 80 chr17:62409460-62409540 1.0000 80 chr4:8254603-8254683 1.0000 80 chr12:125093796-12509387 1.0000 80 chr12:9039943-9040023 1.0000 80 chr1:23441778-23441858 1.0000 80 chr12:56831519-56831599 1.0000 80 chr12:57325357-57325437 1.0000 80 chr5:159671314-159671394 1.0000 80 chr12:117566187-11756626 1.0000 80 chr7:124581675-124581755 1.0000 80 chr7:121078701-121078781 1.0000 80 chr5:71522995-71523075 1.0000 80 chr1:179015363-179015443 1.0000 80 chr17:38673168-38673248 1.0000 80 chr6:13909343-13909423 1.0000 80 chr3:24561365-24561445 1.0000 80 chr4:75191757-75191837 1.0000 80 chr3:143002461-143002541 1.0000 80 chr4:159924949-159925029 1.0000 80 chr5:159671519-159671599 1.0000 80 chr7:86736662-86736742 1.0000 80 chr21:40580934-40581014 1.0000 80 chr6:15266836-15266916 1.0000 80 chr15:80448174-80448254 1.0000 80 chr2:85682931-85683011 1.0000 80 chr17:55938541-55938621 1.0000 80 chr16:58826348-58826428 1.0000 80 chr17:72414972-72415052 1.0000 80 chr20:52294688-52294768 1.0000 80 chr10:100219321-10021940 1.0000 80 chr1:212204464-212204544 1.0000 80 chr1:113614877-113614957 1.0000 80 chr7:135614671-135614751 1.0000 80 chr7:10747337-10747417 1.0000 80 chr10:31531970-31532050 1.0000 80 chr15:85278403-85278483 1.0000 80 chr16:84172905-84172985 1.0000 80 chr9:74357326-74357406 1.0000 80 chr4:159823967-159824047 1.0000 80 chr19:40791590-40791670 1.0000 80 chr22:43500187-43500267 1.0000 80 chr4:178958847-178958927 1.0000 80 chr9:101011078-101011158 1.0000 80 chr17:73068155-73068235 1.0000 80 chr7:110714958-110715038 1.0000 80 chr1:180490816-180490896 1.0000 80 chr13:19495416-19495496 1.0000 80 chr1:231120727-231120807 1.0000 80 chr7:150097574-150097654 1.0000 80 chr18:8913724-8913804 1.0000 80 chr10:11727909-11727989 1.0000 80 chr6:6712952-6713032 1.0000 80 chr1:32421707-32421787 1.0000 80 chr10:80808142-80808222 1.0000 80 chr6:15995373-15995453 1.0000 80 chr4:110070063-110070143 1.0000 80 chr7:129063718-129063798 1.0000 80 chr11:62235330-62235410 1.0000 80 chr11:61517328-61517408 1.0000 80 chr4:95471669-95471749 1.0000 80 chr1:169278541-169278621 1.0000 80 chr7:151047177-151047257 1.0000 80 chr17:65780591-65780671 1.0000 80 chr8:101912818-101912898 1.0000 80 chrX:14057663-14057743 1.0000 80 chr9:14395902-14395982 1.0000 80 chr22:50557259-50557339 1.0000 80 chr11:2799888-2799968 1.0000 80 chr10:97884588-97884668 1.0000 80 chr3:154755834-154755914 1.0000 80 chr1:26187873-26187953 1.0000 80 chr7:111117633-111117713 1.0000 80 chr19:39894626-39894706 1.0000 80 chr20:17663476-17663556 1.0000 80 chr5:131332591-131332671 1.0000 80 chr6:15995167-15995247 1.0000 80 chr5:118644734-118644814 1.0000 80 chr10:75690720-75690800 1.0000 80 chr2:30414820-30414900 1.0000 80 chr8:144973726-144973806 1.0000 80 chr9:124041197-124041277 1.0000 80 chr16:75023025-75023105 1.0000 80 chr13:111158968-11115904 1.0000 80 chr11:3855957-3856037 1.0000 80 chr18:77361316-77361396 1.0000 80 chr6:119634184-119634264 1.0000 80 chr8:37949415-37949495 1.0000 80 chr10:73513454-73513534 1.0000 80 chr7:99284012-99284092 1.0000 80 chr1:101723721-101723801 1.0000 80 chr12:90072110-90072190 1.0000 80 chr6:168257844-168257924 1.0000 80 chr8:37939661-37939741 1.0000 80 chr1:20511975-20512055 1.0000 80 chr9:97534489-97534569 1.0000 80 chr1:183962371-183962451 1.0000 80 chr18:19266555-19266635 1.0000 80 chr16:57096454-57096534 1.0000 80 chr16:68766282-68766362 1.0000 80 chr6:34249893-34249973 1.0000 80 chr5:81250822-81250902 1.0000 80 chr21:46013988-46014068 1.0000 80 chr17:80248065-80248145 1.0000 80 chr22:36815477-36815557 1.0000 80 chr6:14453021-14453101 1.0000 80 chr8:38068380-38068460 1.0000 80 chr3:43700958-43701038 1.0000 80 chr8:125968463-125968543 1.0000 80 chr12:113667897-11366797 1.0000 80 chr3:14639943-14640023 1.0000 80 chr5:34867391-34867471 1.0000 80 chr6:82915917-82915997 1.0000 80 chr19:40951970-40952050 1.0000 80 chr6:32937754-32937834 1.0000 80 chr17:47049837-47049917 1.0000 80 chrX:124532985-124533065 1.0000 80 chr1:118187808-118187888 1.0000 80 chr8:126954475-126954555 1.0000 80 chr5:81652845-81652925 1.0000 80 chr3:24393452-24393532 1.0000 80 chr19:49379662-49379742 1.0000 80 chr6:106760885-106760965 1.0000 80 chr3:119514099-119514179 1.0000 80 chr1:208393385-208393465 1.0000 80 chr3:141087143-141087223 1.0000 80 chr6:167513762-167513842 1.0000 80 chr11:4015381-4015461 1.0000 80 chr7:64375137-64375217 1.0000 80 chr13:97912583-97912663 1.0000 80 chr17:8059782-8059862 1.0000 80 chr3:38128902-38128982 1.0000 80 chr1:204616822-204616902 1.0000 80 chr10:6515545-6515625 1.0000 80 chr7:22473713-22473793 1.0000 80 chr5:64372493-64372573 1.0000 80 chr9:100265865-100265945 1.0000 80 chrX:47518688-47518768 1.0000 80 chr17:46599526-46599606 1.0000 80 chr10:17038334-17038414 1.0000 80 chr2:152545390-152545470 1.0000 80 chr19:39749138-39749218 1.0000 80 chr1:45769775-45769855 1.0000 80 chr11:72446799-72446879 1.0000 80 chr2:68878436-68878516 1.0000 80 chr6:34252828-34252908 1.0000 80 chr2:28807000-28807080 1.0000 80 chrX:39710167-39710247 1.0000 80 chr1:16470541-16470621 1.0000 80 chr7:158990317-158990397 1.0000 80 chr12:72271627-72271707 1.0000 80 chr17:53528812-53528892 1.0000 80 chr16:66934008-66934088 1.0000 80 chr13:111607672-11160775 1.0000 80 chr5:179989845-179989925 1.0000 80 chr1:246495580-246495660 1.0000 80 chr7:99797908-99797988 1.0000 80 chr2:106217530-106217610 1.0000 80 chr2:85727391-85727471 1.0000 80 chr4:56596106-56596186 1.0000 80 chr19:32912971-32913051 1.0000 80 chr7:154468573-154468653 1.0000 80 chr6:47210295-47210375 1.0000 80 chr19:49284263-49284343 1.0000 80 chr9:114835469-114835549 1.0000 80 chrX:130086501-130086581 1.0000 80 chr1:41329729-41329809 1.0000 80 chr16:70805222-70805302 1.0000 80 chr14:65308029-65308109 1.0000 80 chr1:51895766-51895846 1.0000 80 chr19:21311719-21311799 1.0000 80 chr7:99942559-99942639 1.0000 80 chr1:236515470-236515550 1.0000 80 chr8:125663539-125663619 1.0000 80 chr11:58544466-58544546 1.0000 80 chr6:140098586-140098666 1.0000 80 chr10:102118962-10211904 1.0000 80 chr3:186606485-186606565 1.0000 80 chr20:809840-809920 1.0000 80 chr11:38560557-38560637 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_LEF1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/LEF1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.26 C 0.238 G 0.236 T 0.266 Background letter frequencies (from file dataset with add-one prior applied): A 0.26 C 0.238 G 0.236 T 0.266 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF SATCAAAG MEME-1 width = 8 sites = 76 llr = 659 E-value = 1.1e-059 ******************************************************************************** -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :711aaa1 pos.-specific C 5::9:::: probability G 4::1:::9 matrix T :39::::: bits 2.1 1.9 **** 1.7 * **** 1.5 * **** Relative 1.2 ****** Entropy 1.0 ******* (12.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CATCAAAG consensus GT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:72446799-72446879 51 1.62e-05 ATCTGGCTAA CATCAAAG ACACGGTGAC chr7:22473713-22473793 25 1.62e-05 GAGATAATTG CATCAAAG GGATTCAACT chr1:20511975-20512055 42 1.62e-05 TGGCTGGGGA CATCAAAG GAGGTGCAGA chr20:17663476-17663556 33 1.62e-05 AAGTTCTTAT CATCAAAG AGATTGCAAT chr10:11727909-11727989 17 1.62e-05 AACACCAGCT CATCAAAG GACTTCAAAC chr4:178958847-178958927 44 1.62e-05 gctgtgccca catcaaag acttttgact chr6:15266836-15266916 10 1.62e-05 GGAATCTTT CATCAAAG TTTCTTCTGC chr4:75191757-75191837 61 1.62e-05 GGATAGCCCA CATCAAAG CTATTGTGTG chr12:56831519-56831599 21 1.62e-05 aagtcatatg catcaaag agaaaaagtg chr2:196195371-196195451 45 1.62e-05 ggtttattaa catcaaag ggacaaaaag chr12:12186487-12186567 25 1.62e-05 TGTGGATGTA CATCAAAG GCTCCAGCTT chr6:70874662-70874742 48 1.62e-05 GAGATAGCCA CATCAAAG CAGTTTGGGA chr7:135335795-135335875 38 1.62e-05 GTAGGGACCA CATCAAAG GCAGCCTCCA chr21:43472041-43472121 22 1.62e-05 TCACCCTCAA CATCAAAG CCCTTTTGTG chr16:55657091-55657171 37 1.62e-05 CCTTGAGCCA CATCAAAG GCTTGCACTT chr14:65308029-65308109 54 3.24e-05 GGAATGTGGA GATCAAAG GAGTGGGAAG chr19:49284263-49284343 17 3.24e-05 ttatcagaga gatcaaag actttaatat chrX:47518688-47518768 7 3.24e-05 CGAGGA GATCAAAG AAGACTAGGG chr13:111158968-11115904 44 3.24e-05 AAGTGGCCAA GATCAAAG GGCCACAGCG chr10:75690720-75690800 68 3.24e-05 ttataagaaa gatcaaag acttt chr5:118644734-118644814 56 3.24e-05 GAAATACAAA GATCAAAG ACCTTTACTG chr7:151047177-151047257 31 3.24e-05 ttctcagaaa gatcaaag acgttaatac chr7:110714958-110715038 67 3.24e-05 caatgacaga gatcaaag gctaat chr16:84172905-84172985 26 3.24e-05 ggggcaggaa gatcaaag agagagagcc chr2:85682931-85683011 28 3.24e-05 GGGACAAGGA GATCAAAG GGCAGGAGTG chr15:80448174-80448254 39 3.24e-05 ttataagaaa gatcaaag actttaagac chr3:143002461-143002541 61 3.24e-05 TCAGGCCCAA GATCAAAG CCTTCACTGG chr7:124581675-124581755 15 3.24e-05 ggggccacaa gatcaaag gagccagttt chr11:297922-298002 45 3.24e-05 GAGCAGCAGA GATCAAAG GCCTGGGCTC chr17:6950417-6950497 8 3.24e-05 taagaaa gatcaaag actttagact chr7:43774517-43774597 25 3.24e-05 ttataagaaa gatcaaag actttaagac chr17:7236210-7236290 25 3.24e-05 tgataagaaa gatcaaag acattaagac chr19:49540218-49540298 28 3.24e-05 CCCTGCGTAA GATCAAAG GGAAGAAAGG chr1:39853306-39853386 39 3.24e-05 AGTCTCCTAA GATCAAAG GCTATGCTGA chr7:127460476-127460556 33 3.24e-05 AGTTTTTGAA GATCAAAG ACAAAGATGA chr1:169307969-169308049 53 3.24e-05 GAATTTCAGA GATCAAAG GAACATTAAC chr8:144021574-144021654 24 3.24e-05 GACCCAGAGG GATCAAAG AGTTCAGTGG chr11:38560557-38560637 20 4.90e-05 tagataagca cttcaaag gtcgtgtgct chr11:58544466-58544546 37 4.90e-05 actccacatt cttcaaag tttattacag chr7:64375137-64375217 66 4.90e-05 GGTGCTGACA CTTCAAAG GCACATT chr3:14639943-14640023 28 4.90e-05 CAACCCAAGA CTTCAAAG CCTTTGGTTA chr4:95471669-95471749 58 4.90e-05 AGTTGATACA CTTCAAAG TACCCGTTAG chr1:180490816-180490896 50 4.90e-05 tcaaacctaa cttcaaag gggacagtga chr9:74357326-74357406 67 4.90e-05 AGAACATTAT CTTCAAAG GCCTAT chr7:135614671-135614751 41 4.90e-05 TTGTCAGTGG CTTCAAAG GCGGTCAGTC chr12:125093796-12509387 7 4.90e-05 CTGGGA CTTCAAAG GAAAGCGCCG chr3:12797396-12797476 19 4.90e-05 tgacaagtga cttcaaag agtctctgca chr5:88429145-88429225 20 4.90e-05 ttgtctctga cttcaaag tgaaaatgta chr10:77054704-77054784 43 4.90e-05 TGGCAGAGCA CTTCAAAG GCCTACGGGT chr15:66083707-66083787 42 4.90e-05 AAACAATAAA CTTCAAAG GGAATGGTGG chr2:100101996-100102076 51 4.90e-05 TCCAGCTGAA CTTCAAAG GGAACTCTAT chr5:112025421-112025501 44 4.90e-05 TTATTTAAGA CTTCAAAG GGAGAATATG chr5:71528314-71528394 24 4.90e-05 GTGGAAGGCA CTTCAAAG GCTTCTTGCA chr17:46297151-46297231 51 6.55e-05 ACAGATAACA GTTCAAAG TCATGCAAAT chr5:81652845-81652925 38 8.16e-05 TATTTGACCA CATGAAAG GGCAGCAAAA chr1:206554483-206554563 21 8.16e-05 CTAATCAGTA CATGAAAG GAAACATCTG chr9:100265865-100265945 29 9.76e-05 CCCAGCCTAA GATGAAAG CCAGTGTCCT chr22:36815477-36815557 63 9.76e-05 TTTACTCTGA GATGAAAG TGCATTGCTA chr5:131332591-131332671 47 9.76e-05 gaaagataaa gatgaaag ggtggcctgg chr6:34249893-34249973 54 1.13e-04 ATTTTCTCCA CAACAAAG GGAGGTTAAA chr5:71522995-71523075 37 1.13e-04 TCACAAACCA CAACAAAG TACATATTCT chr1:204616822-204616902 45 1.47e-04 GCAGTATCAA GAACAAAG ACCAGAgctg chr3:24393452-24393532 17 1.47e-04 TTTGGAAGAG GAACAAAG GGTTCTGCAA chr10:100219321-10021940 51 1.47e-04 TTCTTGACCA CATAAAAG CCCATGGTGA chr1:179015363-179015443 15 1.65e-04 GAGCACTCAT CATCAAAA ATCGCATTTA chr19:15955426-15955506 37 1.65e-04 AACAAGAAGA CATCAAAA CCACCACAGT chr2:106217530-106217610 69 2.00e-04 tctcccatcc aatcaaag ctgt chr20:52294688-52294768 6 2.00e-04 GTGGC AATCAAAG ACATCGGAAT chr16:58826348-58826428 30 2.00e-04 TTCTTCCATA GATAAAAG GGGCCCATGA chr1:246495580-246495660 63 2.34e-04 ggatatagaa gatcaaaa cagccacaat chr16:57096454-57096534 72 2.34e-04 ctggacgtta gatcaaaa g chr6:106760885-106760965 43 2.51e-04 cagataagaa gttgaaag taaaataaac chr6:6712952-6713032 51 2.51e-04 ATGGGCGAGT GTTGAAAG AGAAAGGCAA chr14:54953532-54953612 41 2.67e-04 ctcttaacca ctaCAAAG GAGGTGGTGA chr11:3855957-3856037 73 3.01e-04 GGAACGGACT CTTAAAAG chr4:159924949-159925029 57 3.01e-04 TTCCCCAGGA CTTAAAAG GCAAAAATAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:72446799-72446879 1.6e-05 50_[+1]_22 chr7:22473713-22473793 1.6e-05 24_[+1]_48 chr1:20511975-20512055 1.6e-05 41_[+1]_31 chr20:17663476-17663556 1.6e-05 32_[+1]_40 chr10:11727909-11727989 1.6e-05 16_[+1]_56 chr4:178958847-178958927 1.6e-05 43_[+1]_29 chr6:15266836-15266916 1.6e-05 9_[+1]_63 chr4:75191757-75191837 1.6e-05 60_[+1]_12 chr12:56831519-56831599 1.6e-05 20_[+1]_52 chr2:196195371-196195451 1.6e-05 44_[+1]_28 chr12:12186487-12186567 1.6e-05 24_[+1]_48 chr6:70874662-70874742 1.6e-05 47_[+1]_25 chr7:135335795-135335875 1.6e-05 37_[+1]_35 chr21:43472041-43472121 1.6e-05 21_[+1]_51 chr16:55657091-55657171 1.6e-05 36_[+1]_36 chr14:65308029-65308109 3.2e-05 53_[+1]_19 chr19:49284263-49284343 3.2e-05 16_[+1]_56 chrX:47518688-47518768 3.2e-05 6_[+1]_66 chr13:111158968-11115904 3.2e-05 43_[+1]_29 chr10:75690720-75690800 3.2e-05 67_[+1]_5 chr5:118644734-118644814 3.2e-05 55_[+1]_17 chr7:151047177-151047257 3.2e-05 30_[+1]_42 chr7:110714958-110715038 3.2e-05 66_[+1]_6 chr16:84172905-84172985 3.2e-05 25_[+1]_47 chr2:85682931-85683011 3.2e-05 27_[+1]_45 chr15:80448174-80448254 3.2e-05 38_[+1]_34 chr3:143002461-143002541 3.2e-05 60_[+1]_12 chr7:124581675-124581755 3.2e-05 14_[+1]_58 chr11:297922-298002 3.2e-05 44_[+1]_28 chr17:6950417-6950497 3.2e-05 7_[+1]_65 chr7:43774517-43774597 3.2e-05 24_[+1]_48 chr17:7236210-7236290 3.2e-05 24_[+1]_48 chr19:49540218-49540298 3.2e-05 27_[+1]_45 chr1:39853306-39853386 3.2e-05 38_[+1]_34 chr7:127460476-127460556 3.2e-05 32_[+1]_40 chr1:169307969-169308049 3.2e-05 52_[+1]_20 chr8:144021574-144021654 3.2e-05 23_[+1]_49 chr11:38560557-38560637 4.9e-05 19_[+1]_53 chr11:58544466-58544546 4.9e-05 36_[+1]_36 chr7:64375137-64375217 4.9e-05 65_[+1]_7 chr3:14639943-14640023 4.9e-05 27_[+1]_45 chr4:95471669-95471749 4.9e-05 57_[+1]_15 chr1:180490816-180490896 4.9e-05 49_[+1]_23 chr9:74357326-74357406 4.9e-05 66_[+1]_6 chr7:135614671-135614751 4.9e-05 40_[+1]_32 chr12:125093796-12509387 4.9e-05 6_[+1]_66 chr3:12797396-12797476 4.9e-05 18_[+1]_54 chr5:88429145-88429225 4.9e-05 19_[+1]_53 chr10:77054704-77054784 4.9e-05 42_[+1]_30 chr15:66083707-66083787 4.9e-05 41_[+1]_31 chr2:100101996-100102076 4.9e-05 50_[+1]_22 chr5:112025421-112025501 4.9e-05 43_[+1]_29 chr5:71528314-71528394 4.9e-05 23_[+1]_49 chr17:46297151-46297231 6.5e-05 50_[+1]_22 chr5:81652845-81652925 8.2e-05 37_[+1]_35 chr1:206554483-206554563 8.2e-05 20_[+1]_52 chr9:100265865-100265945 9.8e-05 28_[+1]_44 chr22:36815477-36815557 9.8e-05 62_[+1]_10 chr5:131332591-131332671 9.8e-05 46_[+1]_26 chr6:34249893-34249973 0.00011 53_[+1]_19 chr5:71522995-71523075 0.00011 36_[+1]_36 chr1:204616822-204616902 0.00015 44_[+1]_28 chr3:24393452-24393532 0.00015 16_[+1]_56 chr10:100219321-10021940 0.00015 50_[+1]_22 chr1:179015363-179015443 0.00016 14_[+1]_58 chr19:15955426-15955506 0.00016 36_[+1]_36 chr2:106217530-106217610 0.0002 68_[+1]_4 chr20:52294688-52294768 0.0002 5_[+1]_67 chr16:58826348-58826428 0.0002 29_[+1]_43 chr1:246495580-246495660 0.00023 62_[+1]_10 chr16:57096454-57096534 0.00023 71_[+1]_1 chr6:106760885-106760965 0.00025 42_[+1]_30 chr6:6712952-6713032 0.00025 50_[+1]_22 chr14:54953532-54953612 0.00027 40_[+1]_32 chr11:3855957-3856037 0.0003 72_[+1] chr4:159924949-159925029 0.0003 56_[+1]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SATCAAAG width=8 seqs=76 chr11:72446799-72446879 ( 51) CATCAAAG 1 chr7:22473713-22473793 ( 25) CATCAAAG 1 chr1:20511975-20512055 ( 42) CATCAAAG 1 chr20:17663476-17663556 ( 33) CATCAAAG 1 chr10:11727909-11727989 ( 17) CATCAAAG 1 chr4:178958847-178958927 ( 44) CATCAAAG 1 chr6:15266836-15266916 ( 10) CATCAAAG 1 chr4:75191757-75191837 ( 61) CATCAAAG 1 chr12:56831519-56831599 ( 21) CATCAAAG 1 chr2:196195371-196195451 ( 45) CATCAAAG 1 chr12:12186487-12186567 ( 25) CATCAAAG 1 chr6:70874662-70874742 ( 48) CATCAAAG 1 chr7:135335795-135335875 ( 38) CATCAAAG 1 chr21:43472041-43472121 ( 22) CATCAAAG 1 chr16:55657091-55657171 ( 37) CATCAAAG 1 chr14:65308029-65308109 ( 54) GATCAAAG 1 chr19:49284263-49284343 ( 17) GATCAAAG 1 chrX:47518688-47518768 ( 7) GATCAAAG 1 chr13:111158968-11115904 ( 44) GATCAAAG 1 chr10:75690720-75690800 ( 68) GATCAAAG 1 chr5:118644734-118644814 ( 56) GATCAAAG 1 chr7:151047177-151047257 ( 31) GATCAAAG 1 chr7:110714958-110715038 ( 67) GATCAAAG 1 chr16:84172905-84172985 ( 26) GATCAAAG 1 chr2:85682931-85683011 ( 28) GATCAAAG 1 chr15:80448174-80448254 ( 39) GATCAAAG 1 chr3:143002461-143002541 ( 61) GATCAAAG 1 chr7:124581675-124581755 ( 15) GATCAAAG 1 chr11:297922-298002 ( 45) GATCAAAG 1 chr17:6950417-6950497 ( 8) GATCAAAG 1 chr7:43774517-43774597 ( 25) GATCAAAG 1 chr17:7236210-7236290 ( 25) GATCAAAG 1 chr19:49540218-49540298 ( 28) GATCAAAG 1 chr1:39853306-39853386 ( 39) GATCAAAG 1 chr7:127460476-127460556 ( 33) GATCAAAG 1 chr1:169307969-169308049 ( 53) GATCAAAG 1 chr8:144021574-144021654 ( 24) GATCAAAG 1 chr11:38560557-38560637 ( 20) CTTCAAAG 1 chr11:58544466-58544546 ( 37) CTTCAAAG 1 chr7:64375137-64375217 ( 66) CTTCAAAG 1 chr3:14639943-14640023 ( 28) CTTCAAAG 1 chr4:95471669-95471749 ( 58) CTTCAAAG 1 chr1:180490816-180490896 ( 50) CTTCAAAG 1 chr9:74357326-74357406 ( 67) CTTCAAAG 1 chr7:135614671-135614751 ( 41) CTTCAAAG 1 chr12:125093796-12509387 ( 7) CTTCAAAG 1 chr3:12797396-12797476 ( 19) CTTCAAAG 1 chr5:88429145-88429225 ( 20) CTTCAAAG 1 chr10:77054704-77054784 ( 43) CTTCAAAG 1 chr15:66083707-66083787 ( 42) CTTCAAAG 1 chr2:100101996-100102076 ( 51) CTTCAAAG 1 chr5:112025421-112025501 ( 44) CTTCAAAG 1 chr5:71528314-71528394 ( 24) CTTCAAAG 1 chr17:46297151-46297231 ( 51) GTTCAAAG 1 chr5:81652845-81652925 ( 38) CATGAAAG 1 chr1:206554483-206554563 ( 21) CATGAAAG 1 chr9:100265865-100265945 ( 29) GATGAAAG 1 chr22:36815477-36815557 ( 63) GATGAAAG 1 chr5:131332591-131332671 ( 47) GATGAAAG 1 chr6:34249893-34249973 ( 54) CAACAAAG 1 chr5:71522995-71523075 ( 37) CAACAAAG 1 chr1:204616822-204616902 ( 45) GAACAAAG 1 chr3:24393452-24393532 ( 17) GAACAAAG 1 chr10:100219321-10021940 ( 51) CATAAAAG 1 chr1:179015363-179015443 ( 15) CATCAAAA 1 chr19:15955426-15955506 ( 37) CATCAAAA 1 chr2:106217530-106217610 ( 69) AATCAAAG 1 chr20:52294688-52294768 ( 6) AATCAAAG 1 chr16:58826348-58826428 ( 30) GATAAAAG 1 chr1:246495580-246495660 ( 63) GATCAAAA 1 chr16:57096454-57096534 ( 72) GATCAAAA 1 chr6:106760885-106760965 ( 43) GTTGAAAG 1 chr6:6712952-6713032 ( 51) GTTGAAAG 1 chr14:54953532-54953612 ( 41) CTACAAAG 1 chr11:3855957-3856037 ( 73) CTTAAAAG 1 chr4:159924949-159925029 ( 57) CTTAAAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.09724 E= 1.1e-059 -330 118 88 -1289 145 -1289 -1289 12 -198 -1289 -1289 181 -230 185 -136 -1289 194 -1289 -1289 -1289 194 -1289 -1289 -1289 194 -1289 -1289 -1289 -230 -1289 200 -1289 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 76 E= 1.1e-059 0.026316 0.539474 0.434211 0.000000 0.710526 0.000000 0.000000 0.289474 0.065789 0.000000 0.000000 0.934211 0.052632 0.855263 0.092105 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.052632 0.000000 0.947368 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SATCAAAG MEME-1 regular expression -------------------------------------------------------------------------------- [CG][AT]TCAAAG -------------------------------------------------------------------------------- Time 4.95 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTTGATS MEME-2 width = 8 sites = 64 llr = 566 E-value = 4.9e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::::a3: pos.-specific C 9:1:1::3 probability G ::::9::6 matrix T 1a9a::7: bits 2.1 1.9 * * * 1.7 ****** 1.5 ****** Relative 1.2 ****** Entropy 1.0 ******** (12.8 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTTTGATG consensus AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:72271627-72271707 39 1.73e-05 gataacttgt ctttgatg tttgttgctt chr6:167513762-167513842 17 1.73e-05 aagaaggaat ctttgatg tgggcagagc chr6:119634184-119634264 63 1.73e-05 GTTCTCCTTC CTTTGATG CTTTGACCTT chr22:50557259-50557339 2 1.73e-05 c ctttgatg tcataagcag chr7:129063718-129063798 45 1.73e-05 GCATTAATAG CTTTGATG TCAGTCTGCT chr13:19495416-19495496 73 1.73e-05 taattgggtt ctttgatg chr17:72414972-72415052 36 1.73e-05 TGATAATTGC CTTTGATG TCCCGGAAGA chr2:112191566-112191646 8 1.73e-05 caagagt ctttgatg tgggcagagt chr19:47132444-47132524 21 1.73e-05 cctagcaaag ctttgatg ttcttcgtca chr6:3410153-3410233 46 1.73e-05 CTCCCGTGTC CTTTGATG TGCACTGAGC chr10:25186410-25186490 19 1.73e-05 TGGCAAAACC CTTTGATG GCAGGAAACC chr14:101909002-10190908 32 1.73e-05 CACCCAGACT CTTTGATG TGGGTTTGTG chr6:42104753-42104833 56 1.73e-05 actgggtgca ctttgatg tttgagCTAC chr1:206939735-206939815 39 1.73e-05 AGAATTTTCG CTTTGATG TTTCCCACTT chr15:81457010-81457090 47 1.73e-05 CATGAGTTTA CTTTGATG TGGTTTCCCT chr10:103584601-10358468 37 1.73e-05 GCAGATGGTT CTTTGATG ATATAAGCAG chr1:165840821-165840901 43 1.73e-05 TGTGGTCTGC CTTTGATG TGGTTGGGAT chr1:16488963-16489043 53 1.73e-05 TCCTGGGAGC CTTTGATG TGGGTTCTTG chr6:34252828-34252908 34 3.47e-05 CTCCCACACC CTTTGATC CTTCCAGATG chr1:45769775-45769855 46 3.47e-05 ATCCCATCCG CTTTGATC TCGACTGGCG chr11:4015381-4015461 16 3.47e-05 tcagtgagcc ctttgatc atgttatccc chr18:19266555-19266635 43 3.47e-05 CTCCATAAGG CTTTGATC CTAACAGTGT chr9:97534489-97534569 40 3.47e-05 AGAGTGGACC CTTTGATC TTGAGAATCT chr9:101011078-101011158 50 3.47e-05 CGTGGGTTCC CTTTGATC TTTCTTGGCT chr19:40791590-40791670 18 3.47e-05 TTTACATACG CTTTGATC TTGTTTTACT chr10:31531970-31532050 69 3.47e-05 GTCAAGGGCC CTTTGATC TGCC chr3:24561365-24561445 39 3.47e-05 CCGGAGCCTC CTTTGATC TTTTGCTGAC chr17:38673168-38673248 12 3.47e-05 CTTCCTGTGG CTTTGATC TGCAGCCTTA chr6:18269584-18269664 28 3.47e-05 CTCTAGGCTA CTTTGATC TTGTAGATCT chr19:7717092-7717172 18 3.47e-05 TTCCCGGTTT CTTTGATC TTCCGCGTCT chr10:101380345-10138042 30 3.47e-05 ACCTTTTCCC CTTTGATC TTAGAAGCTT chr9:32884611-32884691 40 3.47e-05 Aatgatccca ctttgatc tttagcaacc chr11:74724352-74724432 44 3.47e-05 GCCATCCTCC CTTTGATC TCCATTATCC chr17:53528812-53528892 39 5.15e-05 cccacagagg ctttgaag tggctgtttc chr12:113667897-11366797 27 5.15e-05 aacaccatct ctttgaag ccttcactga chr1:101723721-101723801 37 5.15e-05 CTAGAGATCC CTTTGAAG TTTGGTTGGC chr7:111117633-111117713 23 5.15e-05 gtcttttttc ctttgaag acttttatcg chr3:154755834-154755914 18 5.15e-05 AAACCACACA CTTTGAAG TGTTTCCAAA chr11:2799888-2799968 24 5.15e-05 CACCACTGCC CTTTGAAG TCTCTGTGGT chr9:14395902-14395982 16 5.15e-05 GGGATCGGGC CTTTGAAG CTGTTTTCTA chr11:62235330-62235410 37 5.15e-05 TCATTCACTT CTTTGAAG ttcagttcag chr4:110070063-110070143 64 5.15e-05 CCCTTCTTCC CTTTGAAG TCTTTCTTC chr17:55938541-55938621 23 5.15e-05 tctgagttcc ctttgaag tctgaaattG chr1:179015363-179015443 34 5.15e-05 TCGCATTTAG CTTTGAAG TTTGGTCTTT chr5:159671314-159671394 23 5.15e-05 TGAATTCTTC CTTTGAAG TGGGAGCTGG chr11:43769150-43769230 6 5.15e-05 cactc ctttgaag cgttggaatg chr19:59096082-59096162 55 5.15e-05 cctggttcct ctttgaag tttgtagtag chr1:24136370-24136450 44 5.15e-05 aggagcaggc ctttgaag tcacgagatg chr17:25873067-25873147 59 5.15e-05 CTGGTCAGCC CTTTGAAG TGGTGGTTTC chr2:30414820-30414900 33 8.59e-05 TGTGCTAAGC CTTTCATG TGCCTGTTTT chr4:8254603-8254683 27 1.21e-04 TTATCTAGCA TTTTGATG GGGAGTGGGG chr8:125595665-125595745 5 1.21e-04 cttc ttttgatg ttgcattgca chr16:84077216-84077296 47 1.21e-04 AAAGGCTTCT TTTTGATG TGGTTTCTAA chr1:16470541-16470621 27 1.58e-04 TGCCTCCAGC CTTTCATC TTCTGTTTGC chr5:81652845-81652925 68 1.58e-04 CATCTCTTTG CTTTGATT TCTGT chr7:135614671-135614751 17 1.58e-04 TGGAGAAGAG CTTTGATT GCCTGGTTGT chr1:212204464-212204544 32 1.58e-04 TTCCCCATTG CTTTCATC TCATCCTTTC chr2:100101996-100102076 19 1.58e-04 CCAGCAAGTC CTTTCATC ACCACAATCA chr20:809840-809920 57 1.73e-04 GCCCAGTTCT CTCTGATC TGGGTGTAGT chr1:162391199-162391279 42 1.73e-04 CATTAGGGCT CTCTGATC TACTGCCAGA chrX:130086501-130086581 47 2.25e-04 gcagcagaga ctctgaag ggtaacagtg chr18:77361316-77361396 32 2.25e-04 aatctgctcc ctctgaag tctgctatct chr1:174277880-174277960 46 2.44e-04 ttgcactaga ttttgaag tcagatagtg chr8:38068380-38068460 55 2.80e-04 ATTGTGACTG CTTTCAAC ATATACTTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:72271627-72271707 1.7e-05 38_[+2]_34 chr6:167513762-167513842 1.7e-05 16_[+2]_56 chr6:119634184-119634264 1.7e-05 62_[+2]_10 chr22:50557259-50557339 1.7e-05 1_[+2]_71 chr7:129063718-129063798 1.7e-05 44_[+2]_28 chr13:19495416-19495496 1.7e-05 72_[+2] chr17:72414972-72415052 1.7e-05 35_[+2]_37 chr2:112191566-112191646 1.7e-05 7_[+2]_65 chr19:47132444-47132524 1.7e-05 20_[+2]_52 chr6:3410153-3410233 1.7e-05 45_[+2]_27 chr10:25186410-25186490 1.7e-05 18_[+2]_54 chr14:101909002-10190908 1.7e-05 31_[+2]_41 chr6:42104753-42104833 1.7e-05 55_[+2]_17 chr1:206939735-206939815 1.7e-05 38_[+2]_34 chr15:81457010-81457090 1.7e-05 46_[+2]_26 chr10:103584601-10358468 1.7e-05 36_[+2]_36 chr1:165840821-165840901 1.7e-05 42_[+2]_30 chr1:16488963-16489043 1.7e-05 52_[+2]_20 chr6:34252828-34252908 3.5e-05 33_[+2]_39 chr1:45769775-45769855 3.5e-05 45_[+2]_27 chr11:4015381-4015461 3.5e-05 15_[+2]_57 chr18:19266555-19266635 3.5e-05 42_[+2]_30 chr9:97534489-97534569 3.5e-05 39_[+2]_33 chr9:101011078-101011158 3.5e-05 49_[+2]_23 chr19:40791590-40791670 3.5e-05 17_[+2]_55 chr10:31531970-31532050 3.5e-05 68_[+2]_4 chr3:24561365-24561445 3.5e-05 38_[+2]_34 chr17:38673168-38673248 3.5e-05 11_[+2]_61 chr6:18269584-18269664 3.5e-05 27_[+2]_45 chr19:7717092-7717172 3.5e-05 17_[+2]_55 chr10:101380345-10138042 3.5e-05 29_[+2]_43 chr9:32884611-32884691 3.5e-05 39_[+2]_33 chr11:74724352-74724432 3.5e-05 43_[+2]_29 chr17:53528812-53528892 5.2e-05 38_[+2]_34 chr12:113667897-11366797 5.2e-05 26_[+2]_46 chr1:101723721-101723801 5.2e-05 36_[+2]_36 chr7:111117633-111117713 5.2e-05 22_[+2]_50 chr3:154755834-154755914 5.2e-05 17_[+2]_55 chr11:2799888-2799968 5.2e-05 23_[+2]_49 chr9:14395902-14395982 5.2e-05 15_[+2]_57 chr11:62235330-62235410 5.2e-05 36_[+2]_36 chr4:110070063-110070143 5.2e-05 63_[+2]_9 chr17:55938541-55938621 5.2e-05 22_[+2]_50 chr1:179015363-179015443 5.2e-05 33_[+2]_39 chr5:159671314-159671394 5.2e-05 22_[+2]_50 chr11:43769150-43769230 5.2e-05 5_[+2]_67 chr19:59096082-59096162 5.2e-05 54_[+2]_18 chr1:24136370-24136450 5.2e-05 43_[+2]_29 chr17:25873067-25873147 5.2e-05 58_[+2]_14 chr2:30414820-30414900 8.6e-05 32_[+2]_40 chr4:8254603-8254683 0.00012 26_[+2]_46 chr8:125595665-125595745 0.00012 4_[+2]_68 chr16:84077216-84077296 0.00012 46_[+2]_26 chr1:16470541-16470621 0.00016 26_[+2]_46 chr5:81652845-81652925 0.00016 67_[+2]_5 chr7:135614671-135614751 0.00016 16_[+2]_56 chr1:212204464-212204544 0.00016 31_[+2]_41 chr2:100101996-100102076 0.00016 18_[+2]_54 chr20:809840-809920 0.00017 56_[+2]_16 chr1:162391199-162391279 0.00017 41_[+2]_31 chrX:130086501-130086581 0.00022 46_[+2]_26 chr18:77361316-77361396 0.00022 31_[+2]_41 chr1:174277880-174277960 0.00024 45_[+2]_27 chr8:38068380-38068460 0.00028 54_[+2]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTTGATS width=8 seqs=64 chr12:72271627-72271707 ( 39) CTTTGATG 1 chr6:167513762-167513842 ( 17) CTTTGATG 1 chr6:119634184-119634264 ( 63) CTTTGATG 1 chr22:50557259-50557339 ( 2) CTTTGATG 1 chr7:129063718-129063798 ( 45) CTTTGATG 1 chr13:19495416-19495496 ( 73) CTTTGATG 1 chr17:72414972-72415052 ( 36) CTTTGATG 1 chr2:112191566-112191646 ( 8) CTTTGATG 1 chr19:47132444-47132524 ( 21) CTTTGATG 1 chr6:3410153-3410233 ( 46) CTTTGATG 1 chr10:25186410-25186490 ( 19) CTTTGATG 1 chr14:101909002-10190908 ( 32) CTTTGATG 1 chr6:42104753-42104833 ( 56) CTTTGATG 1 chr1:206939735-206939815 ( 39) CTTTGATG 1 chr15:81457010-81457090 ( 47) CTTTGATG 1 chr10:103584601-10358468 ( 37) CTTTGATG 1 chr1:165840821-165840901 ( 43) CTTTGATG 1 chr1:16488963-16489043 ( 53) CTTTGATG 1 chr6:34252828-34252908 ( 34) CTTTGATC 1 chr1:45769775-45769855 ( 46) CTTTGATC 1 chr11:4015381-4015461 ( 16) CTTTGATC 1 chr18:19266555-19266635 ( 43) CTTTGATC 1 chr9:97534489-97534569 ( 40) CTTTGATC 1 chr9:101011078-101011158 ( 50) CTTTGATC 1 chr19:40791590-40791670 ( 18) CTTTGATC 1 chr10:31531970-31532050 ( 69) CTTTGATC 1 chr3:24561365-24561445 ( 39) CTTTGATC 1 chr17:38673168-38673248 ( 12) CTTTGATC 1 chr6:18269584-18269664 ( 28) CTTTGATC 1 chr19:7717092-7717172 ( 18) CTTTGATC 1 chr10:101380345-10138042 ( 30) CTTTGATC 1 chr9:32884611-32884691 ( 40) CTTTGATC 1 chr11:74724352-74724432 ( 44) CTTTGATC 1 chr17:53528812-53528892 ( 39) CTTTGAAG 1 chr12:113667897-11366797 ( 27) CTTTGAAG 1 chr1:101723721-101723801 ( 37) CTTTGAAG 1 chr7:111117633-111117713 ( 23) CTTTGAAG 1 chr3:154755834-154755914 ( 18) CTTTGAAG 1 chr11:2799888-2799968 ( 24) CTTTGAAG 1 chr9:14395902-14395982 ( 16) CTTTGAAG 1 chr11:62235330-62235410 ( 37) CTTTGAAG 1 chr4:110070063-110070143 ( 64) CTTTGAAG 1 chr17:55938541-55938621 ( 23) CTTTGAAG 1 chr1:179015363-179015443 ( 34) CTTTGAAG 1 chr5:159671314-159671394 ( 23) CTTTGAAG 1 chr11:43769150-43769230 ( 6) CTTTGAAG 1 chr19:59096082-59096162 ( 55) CTTTGAAG 1 chr1:24136370-24136450 ( 44) CTTTGAAG 1 chr17:25873067-25873147 ( 59) CTTTGAAG 1 chr2:30414820-30414900 ( 33) CTTTCATG 1 chr4:8254603-8254683 ( 27) TTTTGATG 1 chr8:125595665-125595745 ( 5) TTTTGATG 1 chr16:84077216-84077296 ( 47) TTTTGATG 1 chr1:16470541-16470621 ( 27) CTTTCATC 1 chr5:81652845-81652925 ( 68) CTTTGATT 1 chr7:135614671-135614751 ( 17) CTTTGATT 1 chr1:212204464-212204544 ( 32) CTTTCATC 1 chr2:100101996-100102076 ( 19) CTTTCATC 1 chr20:809840-809920 ( 57) CTCTGATC 1 chr1:162391199-162391279 ( 42) CTCTGATC 1 chrX:130086501-130086581 ( 47) CTCTGAAG 1 chr18:77361316-77361396 ( 32) CTCTGAAG 1 chr1:174277880-174277960 ( 46) TTTTGAAG 1 chr8:38068380-38068460 ( 55) CTTTCAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.47551 E= 4.9e-048 -1264 198 -1264 -209 -1264 -1264 -1264 191 -1264 -193 -1264 182 -1264 -1264 -1264 191 -1264 -161 197 -1264 194 -1264 -1264 -1264 27 -1264 -1264 137 -1264 46 144 -309 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 64 E= 4.9e-048 0.000000 0.937500 0.000000 0.062500 0.000000 0.000000 0.000000 1.000000 0.000000 0.062500 0.000000 0.937500 0.000000 0.000000 0.000000 1.000000 0.000000 0.078125 0.921875 0.000000 1.000000 0.000000 0.000000 0.000000 0.312500 0.000000 0.000000 0.687500 0.000000 0.328125 0.640625 0.031250 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTGATS MEME-2 regular expression -------------------------------------------------------------------------------- CTTTGA[TA][GC] -------------------------------------------------------------------------------- Time 8.58 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGWGGGG MEME-3 width = 8 sites = 28 llr = 256 E-value = 3.9e-007 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 3::4:::: pos.-specific C ::3::::: probability G 7a7:9aaa matrix T :::61::: bits 2.1 * *** 1.9 * *** 1.7 * **** 1.5 * **** Relative 1.2 ** **** Entropy 1.0 ******** (13.2 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GGGTGGGG consensus A CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:66934008-66934088 66 1.08e-05 AGTGGCCAGA GGGTGGGG GAGGGGG chr3:119514099-119514179 60 1.08e-05 GATGGGAAGA GGGTGGGG CAGGAGAGGG chr6:168257844-168257924 64 1.08e-05 GATAGGATGG GGGTGGGG ATAGTTGAT chr10:97884588-97884668 67 1.08e-05 ggaggctaca gggtgggg gatggt chr9:14395902-14395982 1 1.08e-05 . GGGTGGGG ATCGGGCCTT chr20:52294688-52294768 43 1.08e-05 TGTGTGTGCG GGGTGGGG GAAGGGAAGG chr2:85682931-85683011 52 1.08e-05 AGTGGAGGCA GGGTGGGG AGGAGGGGGA chr11:119312104-11931218 63 1.08e-05 tcctcactgg gggtgggg taaggagcaa chr3:186606485-186606565 71 2.14e-05 ATGGGCAGAG GGGAGGGG TT chr6:140098586-140098666 2 2.14e-05 G GGGAGGGG TGGCCGCTCA chr3:43700958-43701038 35 2.14e-05 gcttggtggg gggagggg cacccgccat chr7:99284012-99284092 66 2.14e-05 gtgaggctgg gggagggg tgcctgc chr11:3855957-3856037 54 2.14e-05 CTGGGAGTGG GGGAGGGG AGGAACGGAC chr15:44975572-44975652 29 2.14e-05 gcttggtggg gggagggg cgtttgccat chr17:46599526-46599606 72 3.24e-05 GCTCTGTCAG GGCTGGGG A chr1:20511975-20512055 33 3.24e-05 AAGAGATTGT GGCTGGGG ACATCAAAGG chr13:97912583-97912663 35 4.43e-05 ccgctctgtg aggtgggg agccattgga chr15:38730428-38730508 63 4.43e-05 cttgagtgta aggtgggg gggggggtca chr22:36815477-36815557 2 7.88e-05 C AGCTGGGG CTCAGGGAGA chr11:61517328-61517408 13 7.88e-05 CAGCACACAC AGCTGGGG CCTCCAGCAA chr9:32884611-32884691 73 7.88e-05 tgataagtca agctgggg chrX:47518688-47518768 31 9.05e-05 AGGGCGTGCG AGCAGGGG CCGTCTGGCA chr5:64372493-64372573 21 9.05e-05 ACCATCCCCA AGCAGGGG AAATACATGT chr1:26187873-26187953 59 9.05e-05 CAGTAATGTG AGCAGGGG CCCCTCCCGG chr22:50557259-50557339 15 9.05e-05 tgatgtcata agcagggg gagactcagc chr10:80808142-80808222 26 1.03e-04 AAGGCCACCG GGGTTGGG GGCAGGGCCA chr5:159671314-159671394 39 1.03e-04 AGTGGGAGCT GGGTTGGG GGGAGGTGCA chr8:101912818-101912898 71 1.15e-04 GTGCGTTGGG GGGATGGG GA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:66934008-66934088 1.1e-05 65_[+3]_7 chr3:119514099-119514179 1.1e-05 59_[+3]_13 chr6:168257844-168257924 1.1e-05 63_[+3]_9 chr10:97884588-97884668 1.1e-05 66_[+3]_6 chr9:14395902-14395982 1.1e-05 [+3]_72 chr20:52294688-52294768 1.1e-05 42_[+3]_30 chr2:85682931-85683011 1.1e-05 51_[+3]_21 chr11:119312104-11931218 1.1e-05 62_[+3]_10 chr3:186606485-186606565 2.1e-05 70_[+3]_2 chr6:140098586-140098666 2.1e-05 1_[+3]_71 chr3:43700958-43701038 2.1e-05 34_[+3]_38 chr7:99284012-99284092 2.1e-05 65_[+3]_7 chr11:3855957-3856037 2.1e-05 53_[+3]_19 chr15:44975572-44975652 2.1e-05 28_[+3]_44 chr17:46599526-46599606 3.2e-05 71_[+3]_1 chr1:20511975-20512055 3.2e-05 32_[+3]_40 chr13:97912583-97912663 4.4e-05 34_[+3]_38 chr15:38730428-38730508 4.4e-05 62_[+3]_10 chr22:36815477-36815557 7.9e-05 1_[+3]_71 chr11:61517328-61517408 7.9e-05 12_[+3]_60 chr9:32884611-32884691 7.9e-05 72_[+3] chrX:47518688-47518768 9.1e-05 30_[+3]_42 chr5:64372493-64372573 9.1e-05 20_[+3]_52 chr1:26187873-26187953 9.1e-05 58_[+3]_14 chr22:50557259-50557339 9.1e-05 14_[+3]_58 chr10:80808142-80808222 0.0001 25_[+3]_47 chr5:159671314-159671394 0.0001 38_[+3]_34 chr8:101912818-101912898 0.00011 70_[+3]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGWGGGG width=8 seqs=28 chr16:66934008-66934088 ( 66) GGGTGGGG 1 chr3:119514099-119514179 ( 60) GGGTGGGG 1 chr6:168257844-168257924 ( 64) GGGTGGGG 1 chr10:97884588-97884668 ( 67) GGGTGGGG 1 chr9:14395902-14395982 ( 1) GGGTGGGG 1 chr20:52294688-52294768 ( 43) GGGTGGGG 1 chr2:85682931-85683011 ( 52) GGGTGGGG 1 chr11:119312104-11931218 ( 63) GGGTGGGG 1 chr3:186606485-186606565 ( 71) GGGAGGGG 1 chr6:140098586-140098666 ( 2) GGGAGGGG 1 chr3:43700958-43701038 ( 35) GGGAGGGG 1 chr7:99284012-99284092 ( 66) GGGAGGGG 1 chr11:3855957-3856037 ( 54) GGGAGGGG 1 chr15:44975572-44975652 ( 29) GGGAGGGG 1 chr17:46599526-46599606 ( 72) GGCTGGGG 1 chr1:20511975-20512055 ( 33) GGCTGGGG 1 chr13:97912583-97912663 ( 35) AGGTGGGG 1 chr15:38730428-38730508 ( 63) AGGTGGGG 1 chr22:36815477-36815557 ( 2) AGCTGGGG 1 chr11:61517328-61517408 ( 13) AGCTGGGG 1 chr9:32884611-32884691 ( 73) AGCTGGGG 1 chrX:47518688-47518768 ( 31) AGCAGGGG 1 chr5:64372493-64372573 ( 21) AGCAGGGG 1 chr1:26187873-26187953 ( 59) AGCAGGGG 1 chr22:50557259-50557339 ( 15) AGCAGGGG 1 chr10:80808142-80808222 ( 26) GGGTTGGG 1 chr5:159671314-159671394 ( 39) GGGTTGGG 1 chr8:101912818-101912898 ( 71) GGGATGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.5697 E= 3.9e-007 31 -1145 152 -1145 -1145 -1145 208 -1145 -1145 43 152 -1145 60 -1145 -1145 119 -1145 -1145 192 -131 -1145 -1145 208 -1145 -1145 -1145 208 -1145 -1145 -1145 208 -1145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 28 E= 3.9e-007 0.321429 0.000000 0.678571 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.321429 0.678571 0.000000 0.392857 0.000000 0.000000 0.607143 0.000000 0.000000 0.892857 0.107143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGWGGGG MEME-3 regular expression -------------------------------------------------------------------------------- [GA]G[GC][TA]GGGG -------------------------------------------------------------------------------- Time 12.14 secs. ******************************************************************************** ******************************************************************************** MOTIF SWGATAAG MEME-4 width = 8 sites = 29 llr = 260 E-value = 1.2e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 17:a:aa: pos.-specific C 5::::::1 probability G 3:a::::9 matrix T 13::a::: bits 2.1 * 1.9 ***** 1.7 ****** 1.5 ****** Relative 1.2 ****** Entropy 1.0 ******* (13.0 bits) 0.8 ******* 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGATAAG consensus GT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:64375137-64375217 43 1.61e-05 GTGGTGCTAG CAGATAAG CAGGCGGTGC chr3:119514099-119514179 23 1.61e-05 GACTCAGTAA CAGATAAG CTTTGTGTGC chr6:106760885-106760965 33 1.61e-05 aaggagccag cagataag aagttgaaag chr8:37939661-37939741 28 1.61e-05 ctggtgagta cagataag gcttgctgag chr8:37949415-37949495 24 1.61e-05 ctggtgagta cagataag gcttgctgag chr6:119634184-119634264 27 1.61e-05 GGAGGTTAAA CAGATAAG GGAGAACTTA chr11:4680324-4680404 5 1.61e-05 agta cagataag gctggctgag chr22:36815477-36815557 16 3.21e-05 GGGGCTCAGG GAGATAAG GCGGGAGCAA chr17:65780591-65780671 35 3.21e-05 ctggtggcca gagataag aacttaaagg chr7:10747337-10747417 6 3.21e-05 ctaga gagataag gccttctggt chr21:40580934-40581014 35 3.21e-05 ctctgcttat gagataag aagaactggc chr1:179015363-179015443 67 3.21e-05 CTTGGCCTGA GAGATAAG CAGCAT chr19:32912971-32913051 40 4.86e-05 tctgacataa ctgataag gaaggaactg chr5:179989845-179989925 16 4.86e-05 ACAAAGGGTC CTGATAAG CTTCAGGTTG chr18:77361316-77361396 3 4.86e-05 gt ctgataag aaacatttca chr8:144973726-144973806 66 4.86e-05 CTCTGCCCTT CTGATAAG TGCTTTG chr7:110714958-110715038 37 4.86e-05 gtgcaagtga ctgataag aaccattcaa chr17:7236210-7236290 14 4.86e-05 cttctatgca ctgataag aaagatcaaa chr3:154755834-154755914 71 6.49e-05 ATGTTTTTCA GTGATAAG AA chr4:178958847-178958927 4 6.49e-05 ttt gtgataag cacccagcat chr1:211546042-211546122 16 6.49e-05 CTGTTATGGG GTGATAAG AGGACTTCTT chr9:32884611-32884691 62 6.49e-05 gcaaccctat gtgataag tcaagctggg chr19:47132444-47132524 73 8.25e-05 gtgttatgtg aagataag chr5:127374471-127374551 61 8.25e-05 CTGTGGTCCC AAGATAAG GATTGAAAGC chr11:5831765-5831845 62 8.25e-05 GGTGGTACAG AAGATAAG CTGGTGTTAA chr11:38560557-38560637 10 1.01e-04 tgcttggtt tagataag cacttcaaag chr7:99942559-99942639 54 1.01e-04 tctccattga tagataag gtcacatgag chr17:46297151-46297231 42 1.35e-04 ACAGCAGCCA CAGATAAC AGTTCAAAGT chr3:12797396-12797476 52 1.69e-04 accgcggatg gagataac cctaatcatg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:64375137-64375217 1.6e-05 42_[+4]_30 chr3:119514099-119514179 1.6e-05 22_[+4]_50 chr6:106760885-106760965 1.6e-05 32_[+4]_40 chr8:37939661-37939741 1.6e-05 27_[+4]_45 chr8:37949415-37949495 1.6e-05 23_[+4]_49 chr6:119634184-119634264 1.6e-05 26_[+4]_46 chr11:4680324-4680404 1.6e-05 4_[+4]_68 chr22:36815477-36815557 3.2e-05 15_[+4]_57 chr17:65780591-65780671 3.2e-05 34_[+4]_38 chr7:10747337-10747417 3.2e-05 5_[+4]_67 chr21:40580934-40581014 3.2e-05 34_[+4]_38 chr1:179015363-179015443 3.2e-05 66_[+4]_6 chr19:32912971-32913051 4.9e-05 39_[+4]_33 chr5:179989845-179989925 4.9e-05 15_[+4]_57 chr18:77361316-77361396 4.9e-05 2_[+4]_70 chr8:144973726-144973806 4.9e-05 65_[+4]_7 chr7:110714958-110715038 4.9e-05 36_[+4]_36 chr17:7236210-7236290 4.9e-05 13_[+4]_59 chr3:154755834-154755914 6.5e-05 70_[+4]_2 chr4:178958847-178958927 6.5e-05 3_[+4]_69 chr1:211546042-211546122 6.5e-05 15_[+4]_57 chr9:32884611-32884691 6.5e-05 61_[+4]_11 chr19:47132444-47132524 8.3e-05 72_[+4] chr5:127374471-127374551 8.3e-05 60_[+4]_12 chr11:5831765-5831845 8.3e-05 61_[+4]_11 chr11:38560557-38560637 0.0001 9_[+4]_63 chr7:99942559-99942639 0.0001 53_[+4]_19 chr17:46297151-46297231 0.00013 41_[+4]_31 chr3:12797396-12797476 0.00017 51_[+4]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SWGATAAG width=8 seqs=29 chr7:64375137-64375217 ( 43) CAGATAAG 1 chr3:119514099-119514179 ( 23) CAGATAAG 1 chr6:106760885-106760965 ( 33) CAGATAAG 1 chr8:37939661-37939741 ( 28) CAGATAAG 1 chr8:37949415-37949495 ( 24) CAGATAAG 1 chr6:119634184-119634264 ( 27) CAGATAAG 1 chr11:4680324-4680404 ( 5) CAGATAAG 1 chr22:36815477-36815557 ( 16) GAGATAAG 1 chr17:65780591-65780671 ( 35) GAGATAAG 1 chr7:10747337-10747417 ( 6) GAGATAAG 1 chr21:40580934-40581014 ( 35) GAGATAAG 1 chr1:179015363-179015443 ( 67) GAGATAAG 1 chr19:32912971-32913051 ( 40) CTGATAAG 1 chr5:179989845-179989925 ( 16) CTGATAAG 1 chr18:77361316-77361396 ( 3) CTGATAAG 1 chr8:144973726-144973806 ( 66) CTGATAAG 1 chr7:110714958-110715038 ( 37) CTGATAAG 1 chr17:7236210-7236290 ( 14) CTGATAAG 1 chr3:154755834-154755914 ( 71) GTGATAAG 1 chr4:178958847-178958927 ( 4) GTGATAAG 1 chr1:211546042-211546122 ( 16) GTGATAAG 1 chr9:32884611-32884691 ( 62) GTGATAAG 1 chr19:47132444-47132524 ( 73) AAGATAAG 1 chr5:127374471-127374551 ( 61) AAGATAAG 1 chr11:5831765-5831845 ( 62) AAGATAAG 1 chr11:38560557-38560637 ( 10) TAGATAAG 1 chr7:99942559-99942639 ( 54) TAGATAAG 1 chr17:46297151-46297231 ( 42) CAGATAAC 1 chr3:12797396-12797476 ( 52) GAGATAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.18043 E= 1.2e-006 -133 102 55 -195 133 -1150 -1150 37 -1150 -1150 208 -1150 194 -1150 -1150 -1150 -1150 -1150 -1150 191 194 -1150 -1150 -1150 194 -1150 -1150 -1150 -1150 -179 198 -1150 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 29 E= 1.2e-006 0.103448 0.482759 0.344828 0.068966 0.655172 0.000000 0.000000 0.344828 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.068966 0.931034 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SWGATAAG MEME-4 regular expression -------------------------------------------------------------------------------- [CG][AT]GATAAG -------------------------------------------------------------------------------- Time 15.64 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTCCCMC MEME-5 width = 8 sites = 22 llr = 202 E-value = 9.7e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::::4: pos.-specific C aa:77a6a probability G :::1:::: matrix T ::a23::: bits 2.1 ** * * 1.9 *** * * 1.7 *** * * 1.5 *** * * Relative 1.2 *** * * Entropy 1.0 *** **** (13.3 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCTCCCCC consensus TT A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chrX:39710167-39710247 38 1.15e-05 CGGAAGCACC CCTCCCCC CACACCATCT chr5:34867391-34867471 24 1.15e-05 AGCACTTCCC CCTCCCCC TCTTATCTCT chr5:81250822-81250902 46 1.15e-05 cgtgactagc cctccccc acctgcccag chr16:75023025-75023105 9 1.15e-05 TCTGCAAC CCTCCCCC ACTCCCACCT chr4:159823967-159824047 14 1.15e-05 ggtggatgcc cctccccc aaccaacctc chr15:85278403-85278483 38 1.15e-05 TTTCCTCACC CCTCCCCC CTTGGTGACA chr7:121078701-121078781 19 1.15e-05 ggcaggcgcc cctccccc accctcgctg chr17:62409460-62409540 20 1.15e-05 GTCCACTGCC CCTCCCCC ATAGAGGGAA chr10:44729189-44729269 38 1.15e-05 ggctgctgcc cctccccc aaggggctga chr10:73513454-73513534 17 2.41e-05 CACCCCATGT CCTCCCAC AGATGCTTCT chr12:125093796-12509387 54 2.41e-05 CAGCGGAGCA CCTCCCAC AGAGGGAAGG chr4:56596106-56596186 33 3.69e-05 cctgatgcga cctctccc ttctgtggtt chr17:46599526-46599606 20 4.98e-05 TGACTGGTGC CCTTCCCC CGCTCTTCTG chr1:41329729-41329809 14 6.38e-05 ctcaagtgac cctctcac ctcaggcttc chr5:159671519-159671599 60 6.38e-05 CACACTCAGA CCTCTCAC CTCTCAGGCT chr19:59096082-59096162 34 6.38e-05 ctttcatgct cctctcac actcctggtt chr19:21311719-21311799 24 7.79e-05 accatatcta ccttccac atattttgta chr15:66083707-66083787 13 8.93e-05 TACTGTTTTT CCTGCCCC CCACCTCCAG chr19:39749138-39749218 16 1.04e-04 tgacaggggg cctttccc tttgtggtag chr22:43500187-43500267 11 1.04e-04 tgacagggag cctttccc tttgtggttg chr10:102118962-10211904 68 1.16e-04 AGCTCTGTTT CCTGCCAC CCTAA chr7:135614671-135614751 67 1.32e-04 TCCATCTGGG CCTTTCAC AGTCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrX:39710167-39710247 1.2e-05 37_[+5]_35 chr5:34867391-34867471 1.2e-05 23_[+5]_49 chr5:81250822-81250902 1.2e-05 45_[+5]_27 chr16:75023025-75023105 1.2e-05 8_[+5]_64 chr4:159823967-159824047 1.2e-05 13_[+5]_59 chr15:85278403-85278483 1.2e-05 37_[+5]_35 chr7:121078701-121078781 1.2e-05 18_[+5]_54 chr17:62409460-62409540 1.2e-05 19_[+5]_53 chr10:44729189-44729269 1.2e-05 37_[+5]_35 chr10:73513454-73513534 2.4e-05 16_[+5]_56 chr12:125093796-12509387 2.4e-05 53_[+5]_19 chr4:56596106-56596186 3.7e-05 32_[+5]_40 chr17:46599526-46599606 5e-05 19_[+5]_53 chr1:41329729-41329809 6.4e-05 13_[+5]_59 chr5:159671519-159671599 6.4e-05 59_[+5]_13 chr19:59096082-59096162 6.4e-05 33_[+5]_39 chr19:21311719-21311799 7.8e-05 23_[+5]_49 chr15:66083707-66083787 8.9e-05 12_[+5]_60 chr19:39749138-39749218 0.0001 15_[+5]_57 chr22:43500187-43500267 0.0001 10_[+5]_62 chr10:102118962-10211904 0.00012 67_[+5]_5 chr7:135614671-135614751 0.00013 66_[+5]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTCCCMC width=8 seqs=22 chrX:39710167-39710247 ( 38) CCTCCCCC 1 chr5:34867391-34867471 ( 24) CCTCCCCC 1 chr5:81250822-81250902 ( 46) CCTCCCCC 1 chr16:75023025-75023105 ( 9) CCTCCCCC 1 chr4:159823967-159824047 ( 14) CCTCCCCC 1 chr15:85278403-85278483 ( 38) CCTCCCCC 1 chr7:121078701-121078781 ( 19) CCTCCCCC 1 chr17:62409460-62409540 ( 20) CCTCCCCC 1 chr10:44729189-44729269 ( 38) CCTCCCCC 1 chr10:73513454-73513534 ( 17) CCTCCCAC 1 chr12:125093796-12509387 ( 54) CCTCCCAC 1 chr4:56596106-56596186 ( 33) CCTCTCCC 1 chr17:46599526-46599606 ( 20) CCTTCCCC 1 chr1:41329729-41329809 ( 14) CCTCTCAC 1 chr5:159671519-159671599 ( 60) CCTCTCAC 1 chr19:59096082-59096162 ( 34) CCTCTCAC 1 chr19:21311719-21311799 ( 24) CCTTCCAC 1 chr15:66083707-66083787 ( 13) CCTGCCCC 1 chr19:39749138-39749218 ( 16) CCTTTCCC 1 chr22:43500187-43500267 ( 11) CCTTTCCC 1 chr10:102118962-10211904 ( 68) CCTGCCAC 1 chr7:135614671-135614751 ( 67) CCTTTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.0499 E= 9.7e-001 -1110 207 -1110 -1110 -1110 207 -1110 -1110 -1110 -1110 -1110 191 -1110 152 -138 -23 -1110 152 -1110 26 -1110 207 -1110 -1110 48 142 -1110 -1110 -1110 207 -1110 -1110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 22 E= 9.7e-001 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.681818 0.090909 0.227273 0.000000 0.681818 0.000000 0.318182 0.000000 1.000000 0.000000 0.000000 0.363636 0.636364 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCCCMC MEME-5 regular expression -------------------------------------------------------------------------------- CCT[CT][CT]C[CA]C -------------------------------------------------------------------------------- Time 19.11 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:16488963-16489043 7.49e-02 52_[+2(1.73e-05)]_20 chr1:165840821-165840901 1.41e-02 42_[+2(1.73e-05)]_30 chr5:71528314-71528394 6.96e-03 23_[+1(4.90e-05)]_49 chr14:54953532-54953612 6.50e-02 80 chr5:112025421-112025501 1.58e-01 43_[+1(4.90e-05)]_29 chr16:55657091-55657171 6.24e-02 36_[+1(1.62e-05)]_36 chr11:74724352-74724432 2.24e-02 43_[+2(3.47e-05)]_29 chr2:100101996-100102076 6.85e-03 50_[+1(4.90e-05)]_22 chr15:66083707-66083787 1.43e-03 12_[+5(8.93e-05)]_21_[+1(4.90e-05)]_\ 31 chr10:77054704-77054784 5.54e-02 42_[+1(4.90e-05)]_30 chr10:103584601-10358468 3.90e-03 36_[+2(1.73e-05)]_36 chr1:206554483-206554563 2.58e-02 20_[+1(8.16e-05)]_52 chr8:144021574-144021654 1.69e-01 23_[+1(3.24e-05)]_49 chr14:21267650-21267730 5.73e-01 80 chr15:81457010-81457090 3.29e-02 46_[+2(1.73e-05)]_26 chr15:44975572-44975652 9.13e-02 28_[+3(2.14e-05)]_44 chr9:32884611-32884691 1.30e-04 39_[+2(3.47e-05)]_14_[+4(6.49e-05)]_\ 3_[+3(7.88e-05)] chr1:206939735-206939815 6.16e-02 38_[+2(1.73e-05)]_34 chr9:126817198-126817278 2.46e-01 80 chr1:169307969-169308049 7.34e-02 52_[+1(3.24e-05)]_20 chr11:5831765-5831845 3.25e-02 61_[+4(8.25e-05)]_11 chr11:4680324-4680404 4.49e-02 4_[+4(1.61e-05)]_68 chr10:43149980-43150060 1.21e-01 80 chr7:127460476-127460556 2.59e-04 32_[+1(3.24e-05)]_40 chr5:88429145-88429225 8.25e-03 19_[+1(4.90e-05)]_53 chr1:39853306-39853386 4.26e-03 38_[+1(3.24e-05)]_34 chr19:49540218-49540298 6.00e-03 27_[+1(3.24e-05)]_45 chr21:43472041-43472121 2.60e-02 21_[+1(1.62e-05)]_51 chr17:46297151-46297231 9.84e-03 50_[+1(6.55e-05)]_22 chr11:56894378-56894458 2.36e-01 80 chr1:220474183-220474263 2.28e-01 80 chr10:101380345-10138042 1.63e-02 29_[+2(3.47e-05)]_43 chr6:42104753-42104833 1.36e-02 55_[+2(1.73e-05)]_17 chr17:7236210-7236290 1.24e-03 13_[+4(4.86e-05)]_3_[+1(3.24e-05)]_\ 48 chr1:174277880-174277960 3.36e-01 80 chr7:43774517-43774597 1.16e-02 24_[+1(3.24e-05)]_48 chr5:127374471-127374551 5.58e-02 60_[+4(8.25e-05)]_12 chr17:25873067-25873147 5.71e-02 58_[+2(5.15e-05)]_14 chr1:162391199-162391279 1.06e-02 80 chr1:24136370-24136450 5.81e-02 43_[+2(5.15e-05)]_29 chr7:135335795-135335875 1.37e-01 37_[+1(1.62e-05)]_35 chr10:44729189-44729269 3.79e-02 37_[+5(1.15e-05)]_35 chr1:211546042-211546122 5.09e-02 15_[+4(6.49e-05)]_57 chr1:182838525-182838605 4.52e-01 80 chr1:117724413-117724493 9.95e-01 80 chr6:18269784-18269864 2.64e-01 80 chr14:101909002-10190908 3.90e-02 31_[+2(1.73e-05)]_41 chr16:84077216-84077296 3.51e-02 80 chr10:25186410-25186490 1.14e-01 18_[+2(1.73e-05)]_54 chr17:6950417-6950497 2.88e-02 7_[+1(3.24e-05)]_43_[+1(4.90e-05)]_\ 14 chr19:59096082-59096162 7.94e-03 23_[+2(8.59e-05)]_2_[+5(6.38e-05)]_\ 13_[+2(5.15e-05)]_18 chr19:15955426-15955506 1.79e-02 80 chr6:70874662-70874742 2.21e-02 47_[+1(1.62e-05)]_25 chr3:12797396-12797476 9.94e-03 18_[+1(4.90e-05)]_39_[+1(8.16e-05)]_\ 7 chr19:7717092-7717172 2.31e-02 17_[+2(3.47e-05)]_55 chr15:38730428-38730508 8.08e-03 62_[+3(4.43e-05)]_10 chr8:125595665-125595745 1.95e-01 80 chr6:3410153-3410233 2.62e-03 45_[+2(1.73e-05)]_27 chr2:172911002-172911082 8.89e-01 80 chr6:18269584-18269664 2.07e-01 27_[+2(3.47e-05)]_45 chr12:12186487-12186567 2.86e-02 24_[+1(1.62e-05)]_48 chr1:172688315-172688395 2.22e-01 80 chr11:119312104-11931218 9.47e-03 62_[+3(1.08e-05)]_10 chr19:47132444-47132524 3.32e-04 20_[+2(1.73e-05)]_44_[+4(8.25e-05)] chr21:40794560-40794640 8.55e-01 80 chr11:297922-298002 2.34e-02 44_[+1(3.24e-05)]_28 chr11:43769150-43769230 5.80e-03 5_[+2(5.15e-05)]_67 chr16:12130968-12131048 8.12e-01 80 chr1:59892989-59893069 6.96e-01 80 chr2:196195371-196195451 8.57e-02 44_[+1(1.62e-05)]_28 chr2:112191566-112191646 1.80e-02 7_[+2(1.73e-05)]_65 chr17:62409460-62409540 3.78e-02 19_[+5(1.15e-05)]_53 chr4:8254603-8254683 4.40e-02 80 chr12:125093796-12509387 3.85e-04 6_[+1(4.90e-05)]_39_[+5(2.41e-05)]_\ 19 chr12:9039943-9040023 1.48e-01 80 chr1:23441778-23441858 6.30e-01 80 chr12:56831519-56831599 2.34e-02 20_[+1(1.62e-05)]_52 chr12:57325357-57325437 3.61e-01 80 chr5:159671314-159671394 1.32e-02 22_[+2(5.15e-05)]_50 chr12:117566187-11756626 2.19e-01 80 chr7:124581675-124581755 3.06e-02 14_[+1(3.24e-05)]_58 chr7:121078701-121078781 2.52e-02 18_[+5(1.15e-05)]_54 chr5:71522995-71523075 1.28e-02 80 chr1:179015363-179015443 2.57e-04 33_[+2(5.15e-05)]_25_[+4(3.21e-05)]_\ 6 chr17:38673168-38673248 4.74e-02 11_[+2(3.47e-05)]_61 chr6:13909343-13909423 1.65e-01 80 chr3:24561365-24561445 7.52e-02 38_[+2(3.47e-05)]_34 chr4:75191757-75191837 1.24e-02 60_[+1(1.62e-05)]_12 chr3:143002461-143002541 4.56e-02 60_[+1(3.24e-05)]_12 chr4:159924949-159925029 5.15e-02 80 chr5:159671519-159671599 8.32e-02 59_[+5(6.38e-05)]_13 chr7:86736662-86736742 1.53e-01 80 chr21:40580934-40581014 3.70e-02 34_[+4(3.21e-05)]_38 chr6:15266836-15266916 8.62e-03 9_[+1(1.62e-05)]_63 chr15:80448174-80448254 2.77e-02 38_[+1(3.24e-05)]_34 chr2:85682931-85683011 2.89e-04 27_[+1(3.24e-05)]_16_[+3(1.08e-05)]_\ [+3(6.67e-05)]_13 chr17:55938541-55938621 1.20e-01 22_[+2(5.15e-05)]_50 chr16:58826348-58826428 1.82e-02 80 chr17:72414972-72415052 4.42e-03 35_[+2(1.73e-05)]_37 chr20:52294688-52294768 2.89e-03 42_[+3(1.08e-05)]_30 chr10:100219321-10021940 2.14e-01 80 chr1:212204464-212204544 1.76e-02 80 chr1:113614877-113614957 8.67e-02 80 chr7:135614671-135614751 4.09e-04 40_[+1(4.90e-05)]_32 chr7:10747337-10747417 8.99e-03 5_[+4(3.21e-05)]_67 chr10:31531970-31532050 2.66e-02 68_[+2(3.47e-05)]_4 chr15:85278403-85278483 6.57e-02 37_[+5(1.15e-05)]_35 chr16:84172905-84172985 2.41e-02 25_[+1(3.24e-05)]_47 chr9:74357326-74357406 3.80e-02 66_[+1(4.90e-05)]_6 chr4:159823967-159824047 5.82e-02 13_[+5(1.15e-05)]_59 chr19:40791590-40791670 8.23e-02 17_[+2(3.47e-05)]_55 chr22:43500187-43500267 1.46e-01 80 chr4:178958847-178958927 1.66e-03 3_[+4(6.49e-05)]_32_[+1(1.62e-05)]_\ 29 chr9:101011078-101011158 6.97e-02 49_[+2(3.47e-05)]_23 chr17:73068155-73068235 6.78e-01 80 chr7:110714958-110715038 2.66e-03 36_[+4(4.86e-05)]_22_[+1(3.24e-05)]_\ 6 chr1:180490816-180490896 1.25e-01 49_[+1(4.90e-05)]_23 chr13:19495416-19495496 9.83e-03 72_[+2(1.73e-05)] chr1:231120727-231120807 5.86e-01 80 chr7:150097574-150097654 5.70e-01 80 chr18:8913724-8913804 5.32e-01 80 chr10:11727909-11727989 6.81e-02 16_[+1(1.62e-05)]_56 chr6:6712952-6713032 1.08e-01 80 chr1:32421707-32421787 3.48e-01 80 chr10:80808142-80808222 1.11e-01 80 chr6:15995373-15995453 9.72e-02 80 chr4:110070063-110070143 3.73e-02 63_[+2(5.15e-05)]_9 chr7:129063718-129063798 1.51e-02 44_[+2(1.73e-05)]_28 chr11:62235330-62235410 1.50e-01 36_[+2(5.15e-05)]_36 chr11:61517328-61517408 6.90e-02 12_[+3(7.88e-05)]_60 chr4:95471669-95471749 5.19e-02 57_[+1(4.90e-05)]_15 chr1:169278541-169278621 1.40e-01 80 chr7:151047177-151047257 3.32e-02 30_[+1(3.24e-05)]_42 chr17:65780591-65780671 7.20e-03 34_[+4(3.21e-05)]_38 chr8:101912818-101912898 9.58e-02 80 chrX:14057663-14057743 7.34e-01 80 chr9:14395902-14395982 3.15e-03 [+3(1.08e-05)]_7_[+2(5.15e-05)]_57 chr22:50557259-50557339 1.08e-03 1_[+2(1.73e-05)]_5_[+3(9.05e-05)]_\ 58 chr11:2799888-2799968 1.16e-01 23_[+2(5.15e-05)]_49 chr10:97884588-97884668 8.35e-02 66_[+3(1.08e-05)]_6 chr3:154755834-154755914 4.59e-03 17_[+2(5.15e-05)]_45_[+4(6.49e-05)]_\ 2 chr1:26187873-26187953 7.37e-02 58_[+3(9.05e-05)]_14 chr7:111117633-111117713 2.28e-01 22_[+2(5.15e-05)]_50 chr19:39894626-39894706 6.58e-01 80 chr20:17663476-17663556 6.97e-02 32_[+1(1.62e-05)]_40 chr5:131332591-131332671 1.44e-02 46_[+1(9.76e-05)]_26 chr6:15995167-15995247 7.94e-01 80 chr5:118644734-118644814 5.25e-02 55_[+1(3.24e-05)]_17 chr10:75690720-75690800 2.24e-02 67_[+1(3.24e-05)]_5 chr2:30414820-30414900 8.21e-03 32_[+2(8.59e-05)]_40 chr8:144973726-144973806 1.02e-01 65_[+4(4.86e-05)]_7 chr9:124041197-124041277 7.79e-01 80 chr16:75023025-75023105 1.27e-02 8_[+5(1.15e-05)]_64 chr13:111158968-11115904 2.97e-02 43_[+1(3.24e-05)]_29 chr11:3855957-3856037 1.17e-02 24_[+3(9.05e-05)]_21_[+3(2.14e-05)]_\ 19 chr18:77361316-77361396 5.80e-03 2_[+4(4.86e-05)]_70 chr6:119634184-119634264 5.30e-04 26_[+4(1.61e-05)]_28_[+2(1.73e-05)]_\ 10 chr8:37949415-37949495 9.15e-02 23_[+4(1.61e-05)]_49 chr10:73513454-73513534 2.43e-02 16_[+5(2.41e-05)]_56 chr7:99284012-99284092 2.59e-02 65_[+3(2.14e-05)]_7 chr1:101723721-101723801 9.40e-02 36_[+2(5.15e-05)]_36 chr12:90072110-90072190 3.66e-01 80 chr6:168257844-168257924 1.13e-02 63_[+3(1.08e-05)]_9 chr8:37939661-37939741 1.19e-01 27_[+4(1.61e-05)]_45 chr1:20511975-20512055 1.21e-04 32_[+3(3.24e-05)]_1_[+1(1.62e-05)]_\ 31 chr9:97534489-97534569 3.53e-02 39_[+2(3.47e-05)]_33 chr1:183962371-183962451 5.58e-01 80 chr18:19266555-19266635 1.33e-01 42_[+2(3.47e-05)]_30 chr16:57096454-57096534 2.42e-02 80 chr16:68766282-68766362 8.65e-01 80 chr6:34249893-34249973 3.85e-02 80 chr5:81250822-81250902 1.12e-02 45_[+5(1.15e-05)]_27 chr21:46013988-46014068 5.26e-01 80 chr17:80248065-80248145 4.38e-01 80 chr22:36815477-36815557 2.38e-04 1_[+3(7.88e-05)]_6_[+4(3.21e-05)]_\ 39_[+1(9.76e-05)]_10 chr6:14453021-14453101 3.74e-01 80 chr8:38068380-38068460 3.21e-01 80 chr3:43700958-43701038 8.83e-02 34_[+3(2.14e-05)]_38 chr8:125968463-125968543 2.74e-01 80 chr12:113667897-11366797 4.76e-03 26_[+2(5.15e-05)]_46 chr3:14639943-14640023 1.14e-02 27_[+1(4.90e-05)]_45 chr5:34867391-34867471 6.13e-03 23_[+5(1.15e-05)]_49 chr6:82915917-82915997 9.23e-01 80 chr19:40951970-40952050 1.23e-01 80 chr6:32937754-32937834 4.03e-01 80 chr17:47049837-47049917 2.54e-01 80 chrX:124532985-124533065 4.02e-01 80 chr1:118187808-118187888 7.97e-01 80 chr8:126954475-126954555 1.27e-01 80 chr5:81652845-81652925 2.82e-02 37_[+1(8.16e-05)]_35 chr3:24393452-24393532 1.23e-01 80 chr19:49379662-49379742 7.78e-02 80 chr6:106760885-106760965 5.45e-04 32_[+4(1.61e-05)]_40 chr3:119514099-119514179 1.51e-03 22_[+4(1.61e-05)]_29_[+3(1.08e-05)]_\ 13 chr1:208393385-208393465 5.84e-02 80 chr3:141087143-141087223 4.80e-01 80 chr6:167513762-167513842 4.13e-02 16_[+2(1.73e-05)]_56 chr11:4015381-4015461 6.00e-02 15_[+2(3.47e-05)]_57 chr7:64375137-64375217 1.54e-05 42_[+4(1.61e-05)]_15_[+1(4.90e-05)]_\ 7 chr13:97912583-97912663 6.82e-02 34_[+3(4.43e-05)]_38 chr17:8059782-8059862 3.02e-01 80 chr3:38128902-38128982 9.79e-01 80 chr1:204616822-204616902 2.29e-01 80 chr10:6515545-6515625 8.88e-02 80 chr7:22473713-22473793 2.00e-02 24_[+1(1.62e-05)]_48 chr5:64372493-64372573 2.72e-02 20_[+3(9.05e-05)]_52 chr9:100265865-100265945 3.13e-02 28_[+1(9.76e-05)]_44 chrX:47518688-47518768 6.60e-03 6_[+1(3.24e-05)]_16_[+3(9.05e-05)]_\ 42 chr17:46599526-46599606 7.61e-03 19_[+5(4.98e-05)]_44_[+3(3.24e-05)]_\ 1 chr10:17038334-17038414 4.68e-01 80 chr2:152545390-152545470 5.59e-01 80 chr19:39749138-39749218 3.11e-02 80 chr1:45769775-45769855 9.73e-02 45_[+2(3.47e-05)]_27 chr11:72446799-72446879 1.71e-03 50_[+1(1.62e-05)]_22 chr2:68878436-68878516 5.96e-01 80 chr6:34252828-34252908 4.26e-03 33_[+2(3.47e-05)]_39 chr2:28807000-28807080 4.64e-01 80 chrX:39710167-39710247 3.34e-02 37_[+5(1.15e-05)]_35 chr1:16470541-16470621 1.27e-01 80 chr7:158990317-158990397 7.36e-01 80 chr12:72271627-72271707 1.03e-03 38_[+2(1.73e-05)]_34 chr17:53528812-53528892 1.30e-01 38_[+2(5.15e-05)]_34 chr16:66934008-66934088 1.73e-02 65_[+3(1.08e-05)]_7 chr13:111607672-11160775 4.13e-01 80 chr5:179989845-179989925 2.94e-02 15_[+4(4.86e-05)]_57 chr1:246495580-246495660 4.26e-01 80 chr7:99797908-99797988 4.82e-01 80 chr2:106217530-106217610 9.90e-02 80 chr2:85727391-85727471 3.14e-01 80 chr4:56596106-56596186 2.20e-02 32_[+5(3.69e-05)]_40 chr19:32912971-32913051 3.45e-02 39_[+4(4.86e-05)]_33 chr7:154468573-154468653 3.99e-01 80 chr6:47210295-47210375 1.08e-01 80 chr19:49284263-49284343 8.38e-02 16_[+1(3.24e-05)]_56 chr9:114835469-114835549 4.60e-01 80 chrX:130086501-130086581 3.78e-01 80 chr1:41329729-41329809 3.80e-02 13_[+5(6.38e-05)]_59 chr16:70805222-70805302 2.39e-01 80 chr14:65308029-65308109 7.54e-03 53_[+1(3.24e-05)]_19 chr1:51895766-51895846 2.17e-01 80 chr19:21311719-21311799 1.66e-01 23_[+5(7.79e-05)]_49 chr7:99942559-99942639 5.14e-02 80 chr1:236515470-236515550 9.72e-01 80 chr8:125663539-125663619 8.42e-01 80 chr11:58544466-58544546 1.50e-01 36_[+1(4.90e-05)]_36 chr6:140098586-140098666 7.41e-02 1_[+3(2.14e-05)]_71 chr10:102118962-10211904 1.53e-01 80 chr3:186606485-186606565 9.76e-02 70_[+3(2.14e-05)]_2 chr20:809840-809920 6.33e-02 80 chr11:38560557-38560637 2.94e-03 19_[+1(4.90e-05)]_53 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************