******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/KHSRP.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:17462791-17462871 1.0000 80 chr12:131249268-13124934 1.0000 80 chr17:1196880-1196960 1.0000 80 chr2:2577826-2577906 1.0000 80 chr2:19548160-19548240 1.0000 80 chr6:43878033-43878113 1.0000 80 chr12:131249888-13124996 1.0000 80 chr17:79093598-79093678 1.0000 80 chr12:64616329-64616409 1.0000 80 chr3:141594908-141594988 1.0000 80 chr7:30174233-30174313 1.0000 80 chr6:139456057-139456137 1.0000 80 chr5:95297739-95297819 1.0000 80 chr19:17728292-17728372 1.0000 80 chr2:28114103-28114183 1.0000 80 chr11:77185408-77185488 1.0000 80 chr4:119512815-119512895 1.0000 80 chr2:74781521-74781601 1.0000 80 chr19:50979510-50979590 1.0000 80 chr17:76554598-76554678 1.0000 80 chr1:4052286-4052366 1.0000 80 chr6:15248930-15249010 1.0000 80 chr1:224180314-224180394 1.0000 80 chr14:68086472-68086552 1.0000 80 chr16:86588795-86588875 1.0000 80 chr19:51506071-51506151 1.0000 80 chr6:143381709-143381789 1.0000 80 chr14:55738804-55738884 1.0000 80 chr19:50862208-50862288 1.0000 80 chr7:5492769-5492849 1.0000 80 chr6:150255523-150255603 1.0000 80 chr20:34203668-34203748 1.0000 80 chr13:49821986-49822066 1.0000 80 chr12:58138346-58138426 1.0000 80 chr7:45808631-45808711 1.0000 80 chr8:21967209-21967289 1.0000 80 chr18:76829159-76829239 1.0000 80 chr7:65235824-65235904 1.0000 80 chr8:49838524-49838604 1.0000 80 chr18:77439710-77439790 1.0000 80 chr19:50837491-50837571 1.0000 80 chr5:176881623-176881703 1.0000 80 chr6:27440193-27440273 1.0000 80 chr14:23388103-23388183 1.0000 80 chrX:48659870-48659950 1.0000 80 chr21:43430394-43430474 1.0000 80 chr14:24768993-24769073 1.0000 80 chr7:64541697-64541777 1.0000 80 chr17:38136737-38136817 1.0000 80 chr9:33001608-33001688 1.0000 80 chr22:39097055-39097135 1.0000 80 chr10:113943506-11394358 1.0000 80 chr20:33873640-33873720 1.0000 80 chr14:32030551-32030631 1.0000 80 chr19:47617003-47617083 1.0000 80 chr11:95523556-95523636 1.0000 80 chr19:36103568-36103648 1.0000 80 chr2:96068406-96068486 1.0000 80 chr14:61447761-61447841 1.0000 80 chr6:34664732-34664812 1.0000 80 chr17:27071394-27071474 1.0000 80 chr1:156698646-156698726 1.0000 80 chr9:99382167-99382247 1.0000 80 chr17:40419080-40419160 1.0000 80 chr19:46135951-46136031 1.0000 80 chr7:137686957-137687037 1.0000 80 chr4:170541650-170541730 1.0000 80 chr17:72510202-72510282 1.0000 80 chr7:75795876-75795956 1.0000 80 chr19:46503040-46503120 1.0000 80 chr1:6320114-6320194 1.0000 80 chr7:154609062-154609142 1.0000 80 chr19:49142337-49142417 1.0000 80 chr3:52444017-52444097 1.0000 80 chr2:68290126-68290206 1.0000 80 chr3:72102117-72102197 1.0000 80 chr19:45946750-45946830 1.0000 80 chr5:1746709-1746789 1.0000 80 chr1:230760016-230760096 1.0000 80 chr6:38607899-38607979 1.0000 80 chr14:105219422-10521950 1.0000 80 chr4:187125480-187125560 1.0000 80 chr1:145439532-145439612 1.0000 80 chr6:44355172-44355252 1.0000 80 chr6:53213771-53213851 1.0000 80 chr7:65958531-65958611 1.0000 80 chr19:46088249-46088329 1.0000 80 chrX:48432378-48432458 1.0000 80 chr1:46806777-46806857 1.0000 80 chr7:39772946-39773026 1.0000 80 chrX:153607655-153607735 1.0000 80 chr10:23344494-23344574 1.0000 80 chr8:125486868-125486948 1.0000 80 chr17:42264256-42264336 1.0000 80 chr16:56574242-56574322 1.0000 80 chr11:3818987-3819067 1.0000 80 chr17:40829262-40829342 1.0000 80 chr3:184053612-184053692 1.0000 80 chr4:8442462-8442542 1.0000 80 chr1:32110242-32110322 1.0000 80 chr12:10766147-10766227 1.0000 80 chr8:145597037-145597117 1.0000 80 chr10:79803627-79803707 1.0000 80 chr5:137673175-137673255 1.0000 80 chr19:51182767-51182847 1.0000 80 chr20:30192153-30192233 1.0000 80 chr12:11501509-11501589 1.0000 80 chr19:51111360-51111440 1.0000 80 chr16:89766720-89766800 1.0000 80 chr8:17104323-17104403 1.0000 80 chr19:9649292-9649372 1.0000 80 chr10:1205651-1205731 1.0000 80 chr11:65270348-65270428 1.0000 80 chr17:57920555-57920635 1.0000 80 chrX:39552698-39552778 1.0000 80 chr4:153457324-153457404 1.0000 80 chr4:120375814-120375894 1.0000 80 chr1:65690419-65690499 1.0000 80 chr19:2962161-2962241 1.0000 80 chr19:56015258-56015338 1.0000 80 chr4:113558186-113558266 1.0000 80 chr20:3801368-3801448 1.0000 80 chr18:77866839-77866919 1.0000 80 chr17:73772899-73772979 1.0000 80 chr12:125398662-12539874 1.0000 80 chr11:61731642-61731722 1.0000 80 chr11:4115972-4116052 1.0000 80 chr19:59055510-59055590 1.0000 80 chr2:8144534-8144614 1.0000 80 chr9:111696364-111696444 1.0000 80 chr1:243265038-243265118 1.0000 80 chrX:347692-347772 1.0000 80 chr3:154042321-154042401 1.0000 80 chr19:47987462-47987542 1.0000 80 chr2:178088925-178089005 1.0000 80 chr11:69259209-69259289 1.0000 80 chr17:7835459-7835539 1.0000 80 chr17:685525-685605 1.0000 80 chr10:70848819-70848899 1.0000 80 chr7:44646066-44646146 1.0000 80 chr18:2655107-2655187 1.0000 80 chr12:131248675-13124875 1.0000 80 chr7:72395523-72395603 1.0000 80 chrX:133941143-133941223 1.0000 80 chrX:102024023-102024103 1.0000 80 chr16:71879821-71879901 1.0000 80 chr19:35225419-35225499 1.0000 80 chr12:31882019-31882099 1.0000 80 chr3:158288870-158288950 1.0000 80 chr10:111971019-11197109 1.0000 80 chr7:140396403-140396483 1.0000 80 chr1:2111910-2111990 1.0000 80 chr19:7553856-7553936 1.0000 80 chr19:16683281-16683361 1.0000 80 chr11:78063336-78063416 1.0000 80 chr13:45915338-45915418 1.0000 80 chr5:175964862-175964942 1.0000 80 chrX:19362010-19362090 1.0000 80 chr19:996495-996575 1.0000 80 chr16:3285180-3285260 1.0000 80 chr7:1458201-1458281 1.0000 80 chr9:100395601-100395681 1.0000 80 chr19:51373798-51373878 1.0000 80 chr4:57253652-57253732 1.0000 80 chr22:50683415-50683495 1.0000 80 chr14:50053207-50053287 1.0000 80 chr12:133022758-13302283 1.0000 80 chr1:1790180-1790260 1.0000 80 chr1:2343990-2344070 1.0000 80 chr1:228296969-228297049 1.0000 80 chr17:73772206-73772286 1.0000 80 chr12:27396983-27397063 1.0000 80 chr19:36119894-36119974 1.0000 80 chr11:12695828-12695908 1.0000 80 chr11:67195889-67195969 1.0000 80 chr3:38206499-38206579 1.0000 80 chr2:237994477-237994557 1.0000 80 chr5:78810406-78810486 1.0000 80 chr5:159436008-159436088 1.0000 80 chr10:35484698-35484778 1.0000 80 chr19:46009781-46009861 1.0000 80 chr6:32164324-32164404 1.0000 80 chr7:98048381-98048461 1.0000 80 chr7:140624805-140624885 1.0000 80 chr3:32115896-32115976 1.0000 80 chr7:55433945-55434025 1.0000 80 chr2:96676234-96676314 1.0000 80 chr10:124740025-12474010 1.0000 80 chr11:111749926-11175000 1.0000 80 chr16:8618402-8618482 1.0000 80 chr5:61834580-61834660 1.0000 80 chr14:36278564-36278644 1.0000 80 chr19:2945343-2945423 1.0000 80 chr6:41888884-41888964 1.0000 80 chr16:19079076-19079156 1.0000 80 chr1:70671285-70671365 1.0000 80 chr20:44420554-44420634 1.0000 80 chr19:9546218-9546298 1.0000 80 chr1:9489010-9489090 1.0000 80 chr7:129592772-129592852 1.0000 80 chr9:125027098-125027178 1.0000 80 chr11:65192130-65192210 1.0000 80 chr7:23571628-23571708 1.0000 80 chr10:70939368-70939448 1.0000 80 chr12:120729905-12072998 1.0000 80 chr7:1199837-1199917 1.0000 80 chr4:170533705-170533785 1.0000 80 chr19:39340936-39341016 1.0000 80 chr12:56512273-56512353 1.0000 80 chr19:39390187-39390267 1.0000 80 chr8:145682416-145682496 1.0000 80 chr3:113775539-113775619 1.0000 80 chr12:123380737-12338081 1.0000 80 chr9:94877677-94877757 1.0000 80 chr9:6015601-6015681 1.0000 80 chr10:3356363-3356443 1.0000 80 chr19:8454838-8454918 1.0000 80 chr9:97488898-97488978 1.0000 80 chr8:145682216-145682296 1.0000 80 chr1:714044-714124 1.0000 80 chr1:1590494-1590574 1.0000 80 chr13:34392180-34392260 1.0000 80 chr8:23218247-23218327 1.0000 80 chr18:33647520-33647600 1.0000 80 chr11:65271181-65271261 1.0000 80 chr19:39881337-39881417 1.0000 80 chr2:105953798-105953878 1.0000 80 chr3:128598286-128598366 1.0000 80 chrX:135055914-135055994 1.0000 80 chr6:3177116-3177196 1.0000 80 chr3:58291924-58292004 1.0000 80 chr15:41047438-41047518 1.0000 80 chr1:1655798-1655878 1.0000 80 chr3:140660532-140660612 1.0000 80 chr19:49164480-49164560 1.0000 80 chr15:42840986-42841066 1.0000 80 chr1:35602546-35602626 1.0000 80 chrX:16737604-16737684 1.0000 80 chr7:66309948-66310028 1.0000 80 chr2:190305769-190305849 1.0000 80 chr17:33914232-33914312 1.0000 80 chr12:6772508-6772588 1.0000 80 chr9:140083014-140083094 1.0000 80 chr17:56744248-56744328 1.0000 80 chr1:153917166-153917246 1.0000 80 chr11:809818-809898 1.0000 80 chr6:37400921-37401001 1.0000 80 chr1:16490950-16491030 1.0000 80 chr4:104119608-104119688 1.0000 80 chr9:86323043-86323123 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_KHSRP/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/KHSRP.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.193 C 0.294 G 0.313 T 0.201 Background letter frequencies (from file dataset with add-one prior applied): A 0.193 C 0.294 G 0.313 T 0.201 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGACGTCA MEME-1 width = 8 sites = 190 llr = 1887 E-value = 2.2e-384 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::9:1::a pos.-specific C :::9::a: probability G :a::9::: matrix T a::1:a:: bits 2.4 * 2.1 * * * 1.9 * * * * 1.7 * * * * Relative 1.4 ******** Entropy 1.2 ******** (14.3 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:37400921-37401001 52 1.27e-05 GCGCTGTCCG TGACGTCA TCAGGCTGCG chr11:809818-809898 56 1.27e-05 GAGCGCCTCG TGACGTCA CTCTGAGGCG chr17:56744248-56744328 32 1.27e-05 CCTCCCGGCG TGACGTCA TGCATAGGCC chr12:6772508-6772588 54 1.27e-05 GAGACAGGTA TGACGTCA CTGGAGGTCG chr17:33914232-33914312 23 1.27e-05 CGCACCCCGA TGACGTCA CGCGGCGACG chr7:66309948-66310028 27 1.27e-05 GCGCCTTCGC TGACGTCA CAGGCGCGGG chrX:16737604-16737684 39 1.27e-05 TTGTCACAAC TGACGTCA CCAGGGGCGG chr15:42840986-42841066 5 1.27e-05 CCTG TGACGTCA TCGAGCCGCG chr19:49164480-49164560 32 1.27e-05 TAGCACCCAA TGACGTCA TAAGAGCGTT chr3:140660532-140660612 29 1.27e-05 GCAGAGTGCG TGACGTCA CGACGCTCAC chr15:41047438-41047518 14 1.27e-05 TCAGTGACCG TGACGTCA GGCAGGCGGC chr3:58291924-58292004 41 1.27e-05 CGCCGCGTGG TGACGTCA TATCCGCCTG chrX:135055914-135055994 13 1.27e-05 CGCAGAAAGA TGACGTCA CTGAAGTCCT chr3:128598286-128598366 19 1.27e-05 CGTAGGCGTG TGACGTCA TCAGGCGGCG chr19:39881337-39881417 25 1.27e-05 GAGCGCTTCA TGACGTCA CGGGCAGACC chr18:33647520-33647600 19 1.27e-05 CGGCCGGCAG TGACGTCA CAGGGACCCA chr13:34392180-34392260 28 1.27e-05 CGACCGGTAG TGACGTCA CGAGATTTGG chr1:714044-714124 24 1.27e-05 CCCGCCCTTG TGACGTCA CGGAAGGCGC chr9:97488898-97488978 52 1.27e-05 CGCGTGTGGA TGACGTCA CCCGGCGCGT chr19:8454838-8454918 20 1.27e-05 CGCTGACCTA TGACGTCA TCGGGACGTT chr12:56512273-56512353 11 1.27e-05 GCCAGCTTCG TGACGTCA CAACCCTGCC chr4:170533705-170533785 72 1.27e-05 CGCTGGCGTG TGACGTCA G chr12:120729905-12072998 36 1.27e-05 CAAATCAACG TGACGTCA CAGAGATGAC chr7:23571628-23571708 40 1.27e-05 GGCGTCTCTG TGACGTCA CGAGGCTCCA chr9:125027098-125027178 45 1.27e-05 CCTGGCTTCG TGACGTCA CGACGTCCGC chr7:129592772-129592852 37 1.27e-05 CTGGGCGCCG TGACGTCA CCTCTGTGAC chr1:9489010-9489090 33 1.27e-05 CGCGGGTGTG TGACGTCA TCTGAGAGCG chr19:9546218-9546298 41 1.27e-05 CAGCGCTCCG TGACGTCA CTTCCGCCTC chr20:44420554-44420634 24 1.27e-05 CGCGCTCCAG TGACGTCA CGGCGCCACT chr19:2945343-2945423 59 1.27e-05 CCCGCGTGCG TGACGTCA CCGTGCTGTC chr14:36278564-36278644 17 1.27e-05 CAAGAGTTCT TGACGTCA TGCCAGCATG chr2:96676234-96676314 58 1.27e-05 TGGTTGCCTG TGACGTCA CCGGACGCGC chr7:55433945-55434025 52 1.27e-05 CCGCCAGGCG TGACGTCA CAGGCGCGCG chr7:140624805-140624885 18 1.27e-05 GTCACGGTCG TGACGTCA CCCCGGTGCG chr7:98048381-98048461 28 1.27e-05 AGGACGGATG TGACGTCA TCAGCAAATA chr6:32164324-32164404 42 1.27e-05 GTTGCCCTGG TGACGTCA CCAGTGCGCG chr19:46009781-46009861 49 1.27e-05 ACCAAATCAG TGACGTCA CTCGGGGCGG chr5:159436008-159436088 23 1.27e-05 CGCCGTACAA TGACGTCA CACAGCGACT chr3:38206499-38206579 31 1.27e-05 GGTTACGCCG TGACGTCA CTCCAGAGGA chr11:12695828-12695908 20 1.27e-05 CGATTCCCCA TGACGTCA CCGGCGGCGG chr19:36119894-36119974 20 1.27e-05 CCCGAATGTA TGACGTCA TGCGCCAGCG chr12:27396983-27397063 66 1.27e-05 GTGGTGCGTA TGACGTCA GGGCGAG chr12:133022758-13302283 41 1.27e-05 CTCCTGTAGA TGACGTCA CCACAGTAAG chr14:50053207-50053287 40 1.27e-05 GCCCAGTTGA TGACGTCA CCATACCACA chr4:57253652-57253732 26 1.27e-05 CGTCGCTACG TGACGTCA GTGCGAGCGA chr19:51373798-51373878 44 1.27e-05 GCCGGCGCCA TGACGTCA TGTAGCTGCG chr9:100395601-100395681 46 1.27e-05 AGCTCGCTCG TGACGTCA CCAAGCTCCG chr7:1458201-1458281 50 1.27e-05 CACCCACAAC TGACGTCA CACAAAAACC chr16:3285180-3285260 24 1.27e-05 TCTGCGGCTG TGACGTCA CAACCGGTGC chr19:996495-996575 55 1.27e-05 GAAACAGTGG TGACGTCA TCGTTCAGAC chr5:175964862-175964942 8 1.27e-05 CCGGAGA TGACGTCA CCCCCAAGAG chr19:7553856-7553936 51 1.27e-05 GGCAACTCCG TGACGTCA CCGCGACGTc chr7:140396403-140396483 52 1.27e-05 AGCGACTCTG TGACGTCA CGGGAGGCGC chr10:111971019-11197109 54 1.27e-05 CAGCCTCTTC TGACGTCA CGCGTTGCTG chr3:158288870-158288950 30 1.27e-05 CTCGTCCTGG TGACGTCA CAGAGCAATG chr12:31882019-31882099 25 1.27e-05 TAGGTTTTTG TGACGTCA CACGGATTTT chrX:102024023-102024103 31 1.27e-05 CATAGTAACC TGACGTCA TATTAGCGAC chrX:133941143-133941223 17 1.27e-05 GCGCCTGAAG TGACGTCA TTGCCTGCAT chr12:131248675-13124875 57 1.27e-05 gatgccgtgt tgacgtca tggttttgat chr18:2655107-2655187 48 1.27e-05 GGGGACGCTG TGACGTCA CAGAGCGCCC chr7:44646066-44646146 34 1.27e-05 CGCGGCTCTG TGACGTCA CGAATCGGTC chr17:685525-685605 37 1.27e-05 CCACGGGCCG TGACGTCA CTAGCCGCCG chr17:7835459-7835539 31 1.27e-05 CGCGGGCGGG TGACGTCA TCGAGGCGAG chr3:154042321-154042401 32 1.27e-05 TGGTTTCTGG TGACGTCA CGGGAGGACG chr1:243265038-243265118 50 1.27e-05 CGCGCCCTTG TGACGTCA CGGAAGGCGC chr9:111696364-111696444 51 1.27e-05 GGCGCGGGAG TGACGTCA CCAGGCGGAG chr2:8144534-8144614 50 1.27e-05 CTAGTTCTGA TGACGTCA TAGGCTGATT chr12:125398662-12539874 20 1.27e-05 ACAGAACGGG TGACGTCA CGACACGACG chr18:77866839-77866919 50 1.27e-05 ACCCCTTTAG TGACGTCA TTGCCCACTC chr19:56015258-56015338 24 1.27e-05 TCGCACCTCG TGACGTCA CAGGCGCGCT chr19:2962161-2962241 38 1.27e-05 tttaaatgta tgacgtca tcttatgtaa chr1:65690419-65690499 24 1.27e-05 AGGGTATTGA TGACGTCA CTGGTGAACC chr4:120375814-120375894 21 1.27e-05 CGCGCCATTG TGACGTCA CGGAAGGCGC chrX:39552698-39552778 24 1.27e-05 TCTGGCGCTA TGACGTCA TCAGATGTCA chr19:9649292-9649372 43 1.27e-05 GGCGCACCGC TGACGTCA TTTACGCTCT chr16:89766720-89766800 31 1.27e-05 ACGTGCCCAG TGACGTCA TCGGCTTCCT chr19:51111360-51111440 43 1.27e-05 AGGCGACTAG TGACGTCA CCGAGGCTTG chr20:30192153-30192233 13 1.27e-05 TATGAATGGG TGACGTCA CAGGCCTGGC chr19:51182767-51182847 53 1.27e-05 CAGCCTTGCA TGACGTCA CTGGCTGCCG chr12:10766147-10766227 43 1.27e-05 CGCCTTGCAG TGACGTCA TCGCGCGGAA chr4:8442462-8442542 12 1.27e-05 CCCGCCTCCA TGACGTCA ACGCGCCGCG chr17:40829262-40829342 64 1.27e-05 GGGGTGCTAG TGACGTCA CGGAAGCCC chr11:3818987-3819067 51 1.27e-05 GAGCGTGTCG TGACGTCA CACAGGGCCT chr16:56574242-56574322 41 1.27e-05 gtgaaactac tgacgtca gctgatcgga chr7:39772946-39773026 23 1.27e-05 CCAGCTACCG TGACGTCA CGAGACCCCC chr7:65958531-65958611 62 1.27e-05 CCCGCGCCTG TGACGTCA GCTGAGGCGC chr6:53213771-53213851 18 1.27e-05 GGGCTGACCG TGACGTCA CAATGGCGCG chr6:44355172-44355252 19 1.27e-05 TGCCACTCGG TGACGTCA CGATCAATCC chr14:105219422-10521950 50 1.27e-05 CGCGCAGCTG TGACGTCA CGGCGTCGTT chr1:230760016-230760096 38 1.27e-05 acgcacgatg tgacgtca cacctgattg chr19:45946750-45946830 27 1.27e-05 CGCCCACTTG TGACGTCA CGAGCCGCTC chr3:72102117-72102197 9 1.27e-05 AAATCTTA TGACGTCA AATTTtatga chr19:49142337-49142417 25 1.27e-05 ATGGTCTTGG TGACGTCA CGCAGGAAAC chr7:154609062-154609142 11 1.27e-05 GATTGATGGA TGACGTCA CAAAAGTCAT chr1:6320114-6320194 52 1.27e-05 GGCCGGGGCG TGACGTCA CAGCTCCGGG chr7:75795876-75795956 61 1.27e-05 CCCGCGCCTG TGACGTCA GCGGAGGCGC chr4:170541650-170541730 23 1.27e-05 GTCAACGTAG TGACGTCA CGCGTCGACG chr7:137686957-137687037 47 1.27e-05 GGAGTGTCTG TGACGTCA CCGAGGAACT chr19:46135951-46136031 36 1.27e-05 GCCCTCATTG TGACGTCA CAGAGGCGGG chr9:99382167-99382247 23 1.27e-05 CAATGCGGCG TGACGTCA CGGAGACGGG chr17:27071394-27071474 27 1.27e-05 CGGGGAGGGA TGACGTCA AGCCCCGAGG chr2:96068406-96068486 29 1.27e-05 CCATTGCCTG TGACGTCA CAGGATCGCG chr19:36103568-36103648 39 1.27e-05 CGGCAACCGA TGACGTCA CTGTTGGCGC chr11:95523556-95523636 11 1.27e-05 CGCTACCTTG TGACGTCA CCAGGGAAGA chr19:47617003-47617083 45 1.27e-05 AGCCCGGAGG TGACGTCA CTCGACAACC chr14:32030551-32030631 30 1.27e-05 CGTTGCTCCG TGACGTCA TCACTCCGCG chr22:39097055-39097135 18 1.27e-05 GACGTAAGTC TGACGTCA TCGGCACCGG chr9:33001608-33001688 25 1.27e-05 CGCTGCGGGA TGACGTCA GAGGCCGGCT chr17:38136737-38136817 24 1.27e-05 CGGCAACTCG TGACGTCA TCTCGTCCCG chr7:64541697-64541777 26 1.27e-05 GCGCCTTCGG TGACGTCA CAGGGGCGGG chr21:43430394-43430474 69 1.27e-05 ATCTTGAATT TGACGTCA TCCC chr14:23388103-23388183 25 1.27e-05 TTTCTGCCCG TGACGTCA GGGGGGAGGC chr5:176881623-176881703 70 1.27e-05 CCCTCCTCGG TGACGTCA CCG chr18:77439710-77439790 72 1.27e-05 CGCCCTTGCG TGACGTCA C chr8:49838524-49838604 50 1.27e-05 GGGAATGTTA TGACGTCA TCAGTCTGTG chr7:65235824-65235904 27 1.27e-05 GCGCCTTCGG TGACGTCA CAGGGGCGGG chr8:21967209-21967289 1 1.27e-05 . TGACGTCA TCTTTCCTGC chr7:45808631-45808711 24 1.27e-05 GCGCCTTCCG TGACGTCA CAAGGGCGCG chr13:49821986-49822066 14 1.27e-05 CGCCTCTCTA TGACGTCA CACGAGGAGC chr20:34203668-34203748 21 1.27e-05 CGGCTCCAGG TGACGTCA CGGCCAGCTC chr7:5492769-5492849 56 1.27e-05 CAGCATGTGA TGACGTCA CTGTCACCCC chr19:50862208-50862288 24 1.27e-05 AACCGTCATA TGACGTCA CTATGGCGTC chr14:55738804-55738884 45 1.27e-05 CGTGTGTCTG TGACGTCA GAAGATGGGT chr19:51506071-51506151 53 1.27e-05 TGGCTGTCGG TGACGTCA TAGAGACGGG chr16:86588795-86588875 46 1.27e-05 TGGCGCGTAG TGACGTCA CCCGCTCCGC chr1:224180314-224180394 32 1.27e-05 CCCGCCCTTG TGACGTCA CGGAAGGCGC chr6:15248930-15249010 45 1.27e-05 GTTGTCATTG TGACGTCA CAAAGGGACG chr19:50979510-50979590 21 1.27e-05 ACGCGCACTG TGACGTCA TGATGCGGAG chr2:74781521-74781601 39 1.27e-05 GCTTTCACTC TGACGTCA CCTTGGGCAT chr4:119512815-119512895 25 1.27e-05 GAGGCTTCCG TGACGTCA CAAGGGTGCG chr11:77185408-77185488 39 1.27e-05 GCTTGCTGCG TGACGTCA TCGCGTCGCG chr2:28114103-28114183 68 1.27e-05 TTCCGTTCCA TGACGTCA GCAGG chr19:17728292-17728372 35 1.27e-05 TCCAGGCCTG TGACGTCA GAGGCCCCGC chr5:95297739-95297819 45 1.27e-05 TAATCATGTC TGACGTCA CGTCTGGTCG chr6:139456057-139456137 20 1.27e-05 GACGCCTGGA TGACGTCA CTCGAGGTGG chr7:30174233-30174313 52 1.27e-05 GCTCGCGCTG TGACGTCA CCGGGCTCGC chr12:64616329-64616409 37 1.27e-05 TCAGCGCTGG TGACGTCA TGCAAACGTG chr2:19548160-19548240 49 1.27e-05 GAGGCCTCTG TGACGTCA CGGTGTCTGC chr19:17462791-17462871 18 1.27e-05 CATCTCGGTG TGACGTCA TGCCAAGTTC chr16:8618402-8618482 1 2.15e-05 . tgatgtca tggtggtgtc chr10:35484698-35484778 6 2.15e-05 AAGGC TGATGTCA TTACATTTCC chr5:78810406-78810486 47 2.15e-05 GTGCGGGGGA TGATGTCA CGCGGCCGGA chr5:137673175-137673255 20 2.15e-05 GAACCGCCTA TGATGTCA TAATCACAAT chr19:46503040-46503120 18 2.15e-05 GCCAGCGCCA TGATGTCA TGAGGCCCGA chr17:72510202-72510282 9 2.15e-05 gtgatgca tgatgtca tgtgatgggt chr1:4052286-4052366 37 2.15e-05 atgggagagg tgatgtca tggagaggtg chr17:79093598-79093678 48 2.15e-05 GCTCCTCCCA TGATGTCA CACATTAGGC chr12:131249888-13124996 15 2.15e-05 gatgtcgtgg tgatgtca ttgtgctgat chr2:2577826-2577906 4 2.15e-05 tag tgatgtca tggtgacatc chr17:1196880-1196960 59 2.15e-05 ttgggtttga tgatgtca tgggctgggt chr12:131249268-13124934 41 2.15e-05 acagtgttga tgatgtca tggtgctgat chr1:153917166-153917246 54 2.93e-05 TAGCCTTCCA TGACATCA TTCATGCTGG chr8:145682216-145682296 43 2.93e-05 TCATGGGGGG TGACATCA CGGAATGACA chr8:145682416-145682496 56 2.93e-05 AAAGAGGTAT TGACATCA CAGAGGTGAT chr6:41888884-41888964 70 2.93e-05 ACGCCTCCAC TGACATCA TCT chrX:48432378-48432458 18 2.93e-05 TGAAGGGTGA TGACATCA GTGACGGTGG chr14:61447761-61447841 36 2.93e-05 GGGTCTTCTA TGACATCA TCACTGTTCG chr6:150255523-150255603 20 2.93e-05 AGTGAGTTTG TGACATCA TGGCGGATGA chr17:76554598-76554678 20 2.93e-05 CATGGGTGGA TGACATCA TCATTGCATG chr6:3177116-3177196 24 3.75e-05 GCAGGTCTGA TTACGTCA CCGCTGGAGA chr17:42264256-42264336 10 3.75e-05 GAATACCTT TTACGTCA GCCCGTCTTA chr12:123380737-12338081 21 4.59e-05 CGGGCGGACG TGACGTAA GTGTCGCGGC chr20:3801368-3801448 34 4.59e-05 ACGGAGGCAG TGACGTAA GCTGTCTTGA chr6:38607899-38607979 56 6.65e-05 CGTCACTGTA TGGCGTCA CCGGCGCACG chr6:27440193-27440273 35 6.65e-05 AGACACAGGA TGGCGTCA GCAGCATACG chr19:50837491-50837571 48 6.65e-05 TACATCACTG TGGCGTCA TTATGACGGA chr12:58138346-58138426 53 6.65e-05 AACAAAACAA TGGCGTCA TCGTGAGGTC chr19:35225419-35225499 71 9.34e-05 CTTTGGGTTA TGTCGTCA TG chr11:69259209-69259289 72 9.34e-05 ttgttGGTGG TGACGTGA G chr12:11501509-11501589 34 9.34e-05 tgatgtgacg tgacgtga cgtgacgtga chr1:32110242-32110322 24 9.34e-05 CGGTCCTTCA TGACGTGA GCAGGGCGCG chr5:1746709-1746789 65 9.34e-05 gaacgtaacg tgacgtga cgtgacgt chr8:125486868-125486948 27 1.06e-04 CCATGGGTGA TGACGACA TGGGGAGCGT chr2:68290126-68290206 10 1.06e-04 GGGCAACGA TGACGACA ATGACGCGCC chr10:3356363-3356443 37 1.19e-04 AAAGGGACAG TGACTTCA CAGAGTGAGG chrX:19362010-19362090 7 1.36e-04 AGCGCA TGACGTTA TTACGACTCT chr11:4115972-4116052 32 1.36e-04 CAGCGTCGAG TAACGTCA TTCGAACCCC chr6:34664732-34664812 10 1.48e-04 GTCCCCGCG TGACCTCA CCGCTGCGGG chr3:52444017-52444097 23 1.73e-04 CGCCGGCGGC AGACGTCA CCAAGGCGCG chr1:156698646-156698726 56 1.73e-04 TCGCGACCTG TGACGTCT GGGGGGCGCC chr1:228296969-228297049 22 2.21e-04 CTGCAGCCCA CGACGTCA CTGGCAGGCG chr16:71879821-71879901 51 2.21e-04 GGGACGAGCT TGACGCCA TCTCCGGGCG chr1:2343990-2344070 20 2.62e-04 CGAGAACTGA TGACGGCA CGACGTGGCT chr3:184053612-184053692 41 2.62e-04 TGCGTGGCTG TGACGTCG CTGCGCCCCG chrX:347692-347772 25 3.34e-04 ATCGCGACGA TGTCATCA CGAGGCGACG chr10:79803627-79803707 36 3.34e-04 cctcttgaag tgtcatca gaaggtcaat chr11:67195889-67195969 15 3.74e-04 GTAAGATCCC TTGCGTCA CCGGCGCGCG chr1:46806777-46806857 43 3.74e-04 TCCGCCCAAG TTGCGTCA TCACCTTCGC chr10:70848819-70848899 64 4.03e-04 CCTAGATTTG TTTCGTCA AAGCGACTT chr4:187125480-187125560 32 4.35e-04 ggcgctacgc tggcgtaa gaggcggcgg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:37400921-37401001 1.3e-05 51_[+1]_21 chr11:809818-809898 1.3e-05 55_[+1]_17 chr17:56744248-56744328 1.3e-05 31_[+1]_41 chr12:6772508-6772588 1.3e-05 53_[+1]_19 chr17:33914232-33914312 1.3e-05 22_[+1]_50 chr7:66309948-66310028 1.3e-05 26_[+1]_46 chrX:16737604-16737684 1.3e-05 38_[+1]_34 chr15:42840986-42841066 1.3e-05 4_[+1]_68 chr19:49164480-49164560 1.3e-05 31_[+1]_41 chr3:140660532-140660612 1.3e-05 28_[+1]_44 chr15:41047438-41047518 1.3e-05 13_[+1]_59 chr3:58291924-58292004 1.3e-05 40_[+1]_32 chrX:135055914-135055994 1.3e-05 12_[+1]_60 chr3:128598286-128598366 1.3e-05 18_[+1]_54 chr19:39881337-39881417 1.3e-05 24_[+1]_48 chr18:33647520-33647600 1.3e-05 18_[+1]_54 chr13:34392180-34392260 1.3e-05 27_[+1]_45 chr1:714044-714124 1.3e-05 23_[+1]_49 chr9:97488898-97488978 1.3e-05 51_[+1]_21 chr19:8454838-8454918 1.3e-05 19_[+1]_53 chr12:56512273-56512353 1.3e-05 10_[+1]_62 chr4:170533705-170533785 1.3e-05 71_[+1]_1 chr12:120729905-12072998 1.3e-05 35_[+1]_37 chr7:23571628-23571708 1.3e-05 39_[+1]_33 chr9:125027098-125027178 1.3e-05 44_[+1]_28 chr7:129592772-129592852 1.3e-05 36_[+1]_36 chr1:9489010-9489090 1.3e-05 32_[+1]_40 chr19:9546218-9546298 1.3e-05 40_[+1]_32 chr20:44420554-44420634 1.3e-05 23_[+1]_49 chr19:2945343-2945423 1.3e-05 58_[+1]_14 chr14:36278564-36278644 1.3e-05 16_[+1]_56 chr2:96676234-96676314 1.3e-05 57_[+1]_15 chr7:55433945-55434025 1.3e-05 51_[+1]_21 chr7:140624805-140624885 1.3e-05 17_[+1]_55 chr7:98048381-98048461 1.3e-05 27_[+1]_45 chr6:32164324-32164404 1.3e-05 41_[+1]_31 chr19:46009781-46009861 1.3e-05 48_[+1]_24 chr5:159436008-159436088 1.3e-05 22_[+1]_50 chr3:38206499-38206579 1.3e-05 30_[+1]_42 chr11:12695828-12695908 1.3e-05 19_[+1]_53 chr19:36119894-36119974 1.3e-05 19_[+1]_53 chr12:27396983-27397063 1.3e-05 65_[+1]_7 chr12:133022758-13302283 1.3e-05 40_[+1]_32 chr14:50053207-50053287 1.3e-05 39_[+1]_33 chr4:57253652-57253732 1.3e-05 25_[+1]_47 chr19:51373798-51373878 1.3e-05 43_[+1]_29 chr9:100395601-100395681 1.3e-05 45_[+1]_27 chr7:1458201-1458281 1.3e-05 49_[+1]_23 chr16:3285180-3285260 1.3e-05 23_[+1]_49 chr19:996495-996575 1.3e-05 54_[+1]_18 chr5:175964862-175964942 1.3e-05 7_[+1]_65 chr19:7553856-7553936 1.3e-05 50_[+1]_22 chr7:140396403-140396483 1.3e-05 51_[+1]_21 chr10:111971019-11197109 1.3e-05 53_[+1]_19 chr3:158288870-158288950 1.3e-05 29_[+1]_43 chr12:31882019-31882099 1.3e-05 24_[+1]_48 chrX:102024023-102024103 1.3e-05 30_[+1]_42 chrX:133941143-133941223 1.3e-05 16_[+1]_56 chr12:131248675-13124875 1.3e-05 56_[+1]_16 chr18:2655107-2655187 1.3e-05 47_[+1]_25 chr7:44646066-44646146 1.3e-05 33_[+1]_39 chr17:685525-685605 1.3e-05 36_[+1]_36 chr17:7835459-7835539 1.3e-05 30_[+1]_42 chr3:154042321-154042401 1.3e-05 31_[+1]_41 chr1:243265038-243265118 1.3e-05 49_[+1]_23 chr9:111696364-111696444 1.3e-05 50_[+1]_22 chr2:8144534-8144614 1.3e-05 49_[+1]_23 chr12:125398662-12539874 1.3e-05 19_[+1]_53 chr18:77866839-77866919 1.3e-05 49_[+1]_23 chr19:56015258-56015338 1.3e-05 23_[+1]_49 chr19:2962161-2962241 1.3e-05 37_[+1]_35 chr1:65690419-65690499 1.3e-05 23_[+1]_49 chr4:120375814-120375894 1.3e-05 20_[+1]_52 chrX:39552698-39552778 1.3e-05 23_[+1]_49 chr19:9649292-9649372 1.3e-05 42_[+1]_30 chr16:89766720-89766800 1.3e-05 30_[+1]_42 chr19:51111360-51111440 1.3e-05 42_[+1]_30 chr20:30192153-30192233 1.3e-05 12_[+1]_60 chr19:51182767-51182847 1.3e-05 52_[+1]_20 chr12:10766147-10766227 1.3e-05 42_[+1]_30 chr4:8442462-8442542 1.3e-05 11_[+1]_61 chr17:40829262-40829342 1.3e-05 63_[+1]_9 chr11:3818987-3819067 1.3e-05 50_[+1]_22 chr16:56574242-56574322 1.3e-05 40_[+1]_32 chr7:39772946-39773026 1.3e-05 22_[+1]_50 chr7:65958531-65958611 1.3e-05 61_[+1]_11 chr6:53213771-53213851 1.3e-05 17_[+1]_55 chr6:44355172-44355252 1.3e-05 18_[+1]_54 chr14:105219422-10521950 1.3e-05 49_[+1]_23 chr1:230760016-230760096 1.3e-05 37_[+1]_35 chr19:45946750-45946830 1.3e-05 26_[+1]_46 chr3:72102117-72102197 1.3e-05 8_[+1]_64 chr19:49142337-49142417 1.3e-05 24_[+1]_48 chr7:154609062-154609142 1.3e-05 10_[+1]_62 chr1:6320114-6320194 1.3e-05 51_[+1]_21 chr7:75795876-75795956 1.3e-05 60_[+1]_12 chr4:170541650-170541730 1.3e-05 22_[+1]_50 chr7:137686957-137687037 1.3e-05 46_[+1]_26 chr19:46135951-46136031 1.3e-05 35_[+1]_37 chr9:99382167-99382247 1.3e-05 22_[+1]_50 chr17:27071394-27071474 1.3e-05 26_[+1]_46 chr2:96068406-96068486 1.3e-05 28_[+1]_44 chr19:36103568-36103648 1.3e-05 38_[+1]_34 chr11:95523556-95523636 1.3e-05 10_[+1]_62 chr19:47617003-47617083 1.3e-05 44_[+1]_28 chr14:32030551-32030631 1.3e-05 29_[+1]_43 chr22:39097055-39097135 1.3e-05 17_[+1]_55 chr9:33001608-33001688 1.3e-05 24_[+1]_48 chr17:38136737-38136817 1.3e-05 23_[+1]_49 chr7:64541697-64541777 1.3e-05 25_[+1]_47 chr21:43430394-43430474 1.3e-05 68_[+1]_4 chr14:23388103-23388183 1.3e-05 24_[+1]_48 chr5:176881623-176881703 1.3e-05 69_[+1]_3 chr18:77439710-77439790 1.3e-05 71_[+1]_1 chr8:49838524-49838604 1.3e-05 49_[+1]_23 chr7:65235824-65235904 1.3e-05 26_[+1]_46 chr8:21967209-21967289 1.3e-05 [+1]_72 chr7:45808631-45808711 1.3e-05 23_[+1]_49 chr13:49821986-49822066 1.3e-05 13_[+1]_59 chr20:34203668-34203748 1.3e-05 20_[+1]_52 chr7:5492769-5492849 1.3e-05 55_[+1]_17 chr19:50862208-50862288 1.3e-05 23_[+1]_49 chr14:55738804-55738884 1.3e-05 44_[+1]_28 chr19:51506071-51506151 1.3e-05 52_[+1]_20 chr16:86588795-86588875 1.3e-05 45_[+1]_27 chr1:224180314-224180394 1.3e-05 31_[+1]_41 chr6:15248930-15249010 1.3e-05 44_[+1]_28 chr19:50979510-50979590 1.3e-05 20_[+1]_52 chr2:74781521-74781601 1.3e-05 38_[+1]_34 chr4:119512815-119512895 1.3e-05 24_[+1]_48 chr11:77185408-77185488 1.3e-05 38_[+1]_34 chr2:28114103-28114183 1.3e-05 67_[+1]_5 chr19:17728292-17728372 1.3e-05 34_[+1]_38 chr5:95297739-95297819 1.3e-05 44_[+1]_28 chr6:139456057-139456137 1.3e-05 19_[+1]_53 chr7:30174233-30174313 1.3e-05 51_[+1]_21 chr12:64616329-64616409 1.3e-05 36_[+1]_36 chr2:19548160-19548240 1.3e-05 48_[+1]_24 chr19:17462791-17462871 1.3e-05 17_[+1]_55 chr16:8618402-8618482 2.1e-05 [+1]_72 chr10:35484698-35484778 2.1e-05 5_[+1]_67 chr5:78810406-78810486 2.1e-05 46_[+1]_26 chr5:137673175-137673255 2.1e-05 19_[+1]_53 chr19:46503040-46503120 2.1e-05 17_[+1]_55 chr17:72510202-72510282 2.1e-05 8_[+1]_64 chr1:4052286-4052366 2.1e-05 36_[+1]_36 chr17:79093598-79093678 2.1e-05 47_[+1]_25 chr12:131249888-13124996 2.1e-05 14_[+1]_58 chr2:2577826-2577906 2.1e-05 3_[+1]_69 chr17:1196880-1196960 2.1e-05 58_[+1]_14 chr12:131249268-13124934 2.1e-05 40_[+1]_32 chr1:153917166-153917246 2.9e-05 53_[+1]_19 chr8:145682216-145682296 2.9e-05 42_[+1]_30 chr8:145682416-145682496 2.9e-05 55_[+1]_17 chr6:41888884-41888964 2.9e-05 69_[+1]_3 chrX:48432378-48432458 2.9e-05 17_[+1]_55 chr14:61447761-61447841 2.9e-05 35_[+1]_37 chr6:150255523-150255603 2.9e-05 19_[+1]_53 chr17:76554598-76554678 2.9e-05 19_[+1]_53 chr6:3177116-3177196 3.7e-05 23_[+1]_49 chr17:42264256-42264336 3.7e-05 9_[+1]_63 chr12:123380737-12338081 4.6e-05 20_[+1]_52 chr20:3801368-3801448 4.6e-05 33_[+1]_39 chr6:38607899-38607979 6.7e-05 55_[+1]_17 chr6:27440193-27440273 6.7e-05 34_[+1]_38 chr19:50837491-50837571 6.7e-05 47_[+1]_25 chr12:58138346-58138426 6.7e-05 52_[+1]_20 chr19:35225419-35225499 9.3e-05 70_[+1]_2 chr11:69259209-69259289 9.3e-05 71_[+1]_1 chr12:11501509-11501589 9.3e-05 33_[+1]_39 chr1:32110242-32110322 9.3e-05 23_[+1]_49 chr5:1746709-1746789 9.3e-05 64_[+1]_8 chr8:125486868-125486948 0.00011 26_[+1]_46 chr2:68290126-68290206 0.00011 9_[+1]_63 chr10:3356363-3356443 0.00012 36_[+1]_36 chrX:19362010-19362090 0.00014 6_[+1]_66 chr11:4115972-4116052 0.00014 31_[+1]_41 chr6:34664732-34664812 0.00015 9_[+1]_63 chr3:52444017-52444097 0.00017 22_[+1]_50 chr1:156698646-156698726 0.00017 55_[+1]_17 chr1:228296969-228297049 0.00022 21_[+1]_51 chr16:71879821-71879901 0.00022 50_[+1]_22 chr1:2343990-2344070 0.00026 19_[+1]_53 chr3:184053612-184053692 0.00026 40_[+1]_32 chrX:347692-347772 0.00033 24_[+1]_48 chr10:79803627-79803707 0.00033 35_[+1]_37 chr11:67195889-67195969 0.00037 14_[+1]_58 chr1:46806777-46806857 0.00037 42_[+1]_30 chr10:70848819-70848899 0.0004 63_[+1]_9 chr4:187125480-187125560 0.00043 31_[+1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACGTCA width=8 seqs=190 chr6:37400921-37401001 ( 52) TGACGTCA 1 chr11:809818-809898 ( 56) TGACGTCA 1 chr17:56744248-56744328 ( 32) TGACGTCA 1 chr12:6772508-6772588 ( 54) TGACGTCA 1 chr17:33914232-33914312 ( 23) TGACGTCA 1 chr7:66309948-66310028 ( 27) TGACGTCA 1 chrX:16737604-16737684 ( 39) TGACGTCA 1 chr15:42840986-42841066 ( 5) TGACGTCA 1 chr19:49164480-49164560 ( 32) TGACGTCA 1 chr3:140660532-140660612 ( 29) TGACGTCA 1 chr15:41047438-41047518 ( 14) TGACGTCA 1 chr3:58291924-58292004 ( 41) TGACGTCA 1 chrX:135055914-135055994 ( 13) TGACGTCA 1 chr3:128598286-128598366 ( 19) TGACGTCA 1 chr19:39881337-39881417 ( 25) TGACGTCA 1 chr18:33647520-33647600 ( 19) TGACGTCA 1 chr13:34392180-34392260 ( 28) TGACGTCA 1 chr1:714044-714124 ( 24) TGACGTCA 1 chr9:97488898-97488978 ( 52) TGACGTCA 1 chr19:8454838-8454918 ( 20) TGACGTCA 1 chr12:56512273-56512353 ( 11) TGACGTCA 1 chr4:170533705-170533785 ( 72) TGACGTCA 1 chr12:120729905-12072998 ( 36) TGACGTCA 1 chr7:23571628-23571708 ( 40) TGACGTCA 1 chr9:125027098-125027178 ( 45) TGACGTCA 1 chr7:129592772-129592852 ( 37) TGACGTCA 1 chr1:9489010-9489090 ( 33) TGACGTCA 1 chr19:9546218-9546298 ( 41) TGACGTCA 1 chr20:44420554-44420634 ( 24) TGACGTCA 1 chr19:2945343-2945423 ( 59) TGACGTCA 1 chr14:36278564-36278644 ( 17) TGACGTCA 1 chr2:96676234-96676314 ( 58) TGACGTCA 1 chr7:55433945-55434025 ( 52) TGACGTCA 1 chr7:140624805-140624885 ( 18) TGACGTCA 1 chr7:98048381-98048461 ( 28) TGACGTCA 1 chr6:32164324-32164404 ( 42) TGACGTCA 1 chr19:46009781-46009861 ( 49) TGACGTCA 1 chr5:159436008-159436088 ( 23) TGACGTCA 1 chr3:38206499-38206579 ( 31) TGACGTCA 1 chr11:12695828-12695908 ( 20) TGACGTCA 1 chr19:36119894-36119974 ( 20) TGACGTCA 1 chr12:27396983-27397063 ( 66) TGACGTCA 1 chr12:133022758-13302283 ( 41) TGACGTCA 1 chr14:50053207-50053287 ( 40) TGACGTCA 1 chr4:57253652-57253732 ( 26) TGACGTCA 1 chr19:51373798-51373878 ( 44) TGACGTCA 1 chr9:100395601-100395681 ( 46) TGACGTCA 1 chr7:1458201-1458281 ( 50) TGACGTCA 1 chr16:3285180-3285260 ( 24) TGACGTCA 1 chr19:996495-996575 ( 55) TGACGTCA 1 chr5:175964862-175964942 ( 8) TGACGTCA 1 chr19:7553856-7553936 ( 51) TGACGTCA 1 chr7:140396403-140396483 ( 52) TGACGTCA 1 chr10:111971019-11197109 ( 54) TGACGTCA 1 chr3:158288870-158288950 ( 30) TGACGTCA 1 chr12:31882019-31882099 ( 25) TGACGTCA 1 chrX:102024023-102024103 ( 31) TGACGTCA 1 chrX:133941143-133941223 ( 17) TGACGTCA 1 chr12:131248675-13124875 ( 57) TGACGTCA 1 chr18:2655107-2655187 ( 48) TGACGTCA 1 chr7:44646066-44646146 ( 34) TGACGTCA 1 chr17:685525-685605 ( 37) TGACGTCA 1 chr17:7835459-7835539 ( 31) TGACGTCA 1 chr3:154042321-154042401 ( 32) TGACGTCA 1 chr1:243265038-243265118 ( 50) TGACGTCA 1 chr9:111696364-111696444 ( 51) TGACGTCA 1 chr2:8144534-8144614 ( 50) TGACGTCA 1 chr12:125398662-12539874 ( 20) TGACGTCA 1 chr18:77866839-77866919 ( 50) TGACGTCA 1 chr19:56015258-56015338 ( 24) TGACGTCA 1 chr19:2962161-2962241 ( 38) TGACGTCA 1 chr1:65690419-65690499 ( 24) TGACGTCA 1 chr4:120375814-120375894 ( 21) TGACGTCA 1 chrX:39552698-39552778 ( 24) TGACGTCA 1 chr19:9649292-9649372 ( 43) TGACGTCA 1 chr16:89766720-89766800 ( 31) TGACGTCA 1 chr19:51111360-51111440 ( 43) TGACGTCA 1 chr20:30192153-30192233 ( 13) TGACGTCA 1 chr19:51182767-51182847 ( 53) TGACGTCA 1 chr12:10766147-10766227 ( 43) TGACGTCA 1 chr4:8442462-8442542 ( 12) TGACGTCA 1 chr17:40829262-40829342 ( 64) TGACGTCA 1 chr11:3818987-3819067 ( 51) TGACGTCA 1 chr16:56574242-56574322 ( 41) TGACGTCA 1 chr7:39772946-39773026 ( 23) TGACGTCA 1 chr7:65958531-65958611 ( 62) TGACGTCA 1 chr6:53213771-53213851 ( 18) TGACGTCA 1 chr6:44355172-44355252 ( 19) TGACGTCA 1 chr14:105219422-10521950 ( 50) TGACGTCA 1 chr1:230760016-230760096 ( 38) TGACGTCA 1 chr19:45946750-45946830 ( 27) TGACGTCA 1 chr3:72102117-72102197 ( 9) TGACGTCA 1 chr19:49142337-49142417 ( 25) TGACGTCA 1 chr7:154609062-154609142 ( 11) TGACGTCA 1 chr1:6320114-6320194 ( 52) TGACGTCA 1 chr7:75795876-75795956 ( 61) TGACGTCA 1 chr4:170541650-170541730 ( 23) TGACGTCA 1 chr7:137686957-137687037 ( 47) TGACGTCA 1 chr19:46135951-46136031 ( 36) TGACGTCA 1 chr9:99382167-99382247 ( 23) TGACGTCA 1 chr17:27071394-27071474 ( 27) TGACGTCA 1 chr2:96068406-96068486 ( 29) TGACGTCA 1 chr19:36103568-36103648 ( 39) TGACGTCA 1 chr11:95523556-95523636 ( 11) TGACGTCA 1 chr19:47617003-47617083 ( 45) TGACGTCA 1 chr14:32030551-32030631 ( 30) TGACGTCA 1 chr22:39097055-39097135 ( 18) TGACGTCA 1 chr9:33001608-33001688 ( 25) TGACGTCA 1 chr17:38136737-38136817 ( 24) TGACGTCA 1 chr7:64541697-64541777 ( 26) TGACGTCA 1 chr21:43430394-43430474 ( 69) TGACGTCA 1 chr14:23388103-23388183 ( 25) TGACGTCA 1 chr5:176881623-176881703 ( 70) TGACGTCA 1 chr18:77439710-77439790 ( 72) TGACGTCA 1 chr8:49838524-49838604 ( 50) TGACGTCA 1 chr7:65235824-65235904 ( 27) TGACGTCA 1 chr8:21967209-21967289 ( 1) TGACGTCA 1 chr7:45808631-45808711 ( 24) TGACGTCA 1 chr13:49821986-49822066 ( 14) TGACGTCA 1 chr20:34203668-34203748 ( 21) TGACGTCA 1 chr7:5492769-5492849 ( 56) TGACGTCA 1 chr19:50862208-50862288 ( 24) TGACGTCA 1 chr14:55738804-55738884 ( 45) TGACGTCA 1 chr19:51506071-51506151 ( 53) TGACGTCA 1 chr16:86588795-86588875 ( 46) TGACGTCA 1 chr1:224180314-224180394 ( 32) TGACGTCA 1 chr6:15248930-15249010 ( 45) TGACGTCA 1 chr19:50979510-50979590 ( 21) TGACGTCA 1 chr2:74781521-74781601 ( 39) TGACGTCA 1 chr4:119512815-119512895 ( 25) TGACGTCA 1 chr11:77185408-77185488 ( 39) TGACGTCA 1 chr2:28114103-28114183 ( 68) TGACGTCA 1 chr19:17728292-17728372 ( 35) TGACGTCA 1 chr5:95297739-95297819 ( 45) TGACGTCA 1 chr6:139456057-139456137 ( 20) TGACGTCA 1 chr7:30174233-30174313 ( 52) TGACGTCA 1 chr12:64616329-64616409 ( 37) TGACGTCA 1 chr2:19548160-19548240 ( 49) TGACGTCA 1 chr19:17462791-17462871 ( 18) TGACGTCA 1 chr16:8618402-8618482 ( 1) TGATGTCA 1 chr10:35484698-35484778 ( 6) TGATGTCA 1 chr5:78810406-78810486 ( 47) TGATGTCA 1 chr5:137673175-137673255 ( 20) TGATGTCA 1 chr19:46503040-46503120 ( 18) TGATGTCA 1 chr17:72510202-72510282 ( 9) TGATGTCA 1 chr1:4052286-4052366 ( 37) TGATGTCA 1 chr17:79093598-79093678 ( 48) TGATGTCA 1 chr12:131249888-13124996 ( 15) TGATGTCA 1 chr2:2577826-2577906 ( 4) TGATGTCA 1 chr17:1196880-1196960 ( 59) TGATGTCA 1 chr12:131249268-13124934 ( 41) TGATGTCA 1 chr1:153917166-153917246 ( 54) TGACATCA 1 chr8:145682216-145682296 ( 43) TGACATCA 1 chr8:145682416-145682496 ( 56) TGACATCA 1 chr6:41888884-41888964 ( 70) TGACATCA 1 chrX:48432378-48432458 ( 18) TGACATCA 1 chr14:61447761-61447841 ( 36) TGACATCA 1 chr6:150255523-150255603 ( 20) TGACATCA 1 chr17:76554598-76554678 ( 20) TGACATCA 1 chr6:3177116-3177196 ( 24) TTACGTCA 1 chr17:42264256-42264336 ( 10) TTACGTCA 1 chr12:123380737-12338081 ( 21) TGACGTAA 1 chr20:3801368-3801448 ( 34) TGACGTAA 1 chr6:38607899-38607979 ( 56) TGGCGTCA 1 chr6:27440193-27440273 ( 35) TGGCGTCA 1 chr19:50837491-50837571 ( 48) TGGCGTCA 1 chr12:58138346-58138426 ( 53) TGGCGTCA 1 chr19:35225419-35225499 ( 71) TGTCGTCA 1 chr11:69259209-69259289 ( 72) TGACGTGA 1 chr12:11501509-11501589 ( 34) TGACGTGA 1 chr1:32110242-32110322 ( 24) TGACGTGA 1 chr5:1746709-1746789 ( 65) TGACGTGA 1 chr8:125486868-125486948 ( 27) TGACGACA 1 chr2:68290126-68290206 ( 10) TGACGACA 1 chr10:3356363-3356443 ( 37) TGACTTCA 1 chrX:19362010-19362090 ( 7) TGACGTTA 1 chr11:4115972-4116052 ( 32) TAACGTCA 1 chr6:34664732-34664812 ( 10) TGACCTCA 1 chr3:52444017-52444097 ( 23) AGACGTCA 1 chr1:156698646-156698726 ( 56) TGACGTCT 1 chr1:228296969-228297049 ( 22) CGACGTCA 1 chr16:71879821-71879901 ( 51) TGACGCCA 1 chr1:2343990-2344070 ( 20) TGACGGCA 1 chr3:184053612-184053692 ( 41) TGACGTCG 1 chrX:347692-347772 ( 25) TGTCATCA 1 chr10:79803627-79803707 ( 36) TGTCATCA 1 chr11:67195889-67195969 ( 15) TTGCGTCA 1 chr1:46806777-46806857 ( 43) TTGCGTCA 1 chr10:70848819-70848899 ( 64) TTTCGTCA 1 chr4:187125480-187125560 ( 32) TGGCGTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.67961 E= 2.2e-384 -519 -580 -1421 230 -519 -1421 163 -293 229 -1421 -308 -325 -1421 167 -1421 -167 -187 -580 158 -525 -420 -580 -589 229 -361 171 -389 -525 236 -1421 -589 -525 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 190 E= 2.2e-384 0.005263 0.005263 0.000000 0.989474 0.005263 0.000000 0.968421 0.026316 0.942105 0.000000 0.036842 0.021053 0.000000 0.936842 0.000000 0.063158 0.052632 0.005263 0.936842 0.005263 0.010526 0.005263 0.005263 0.978947 0.015789 0.957895 0.021053 0.005263 0.989474 0.000000 0.005263 0.005263 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 regular expression -------------------------------------------------------------------------------- TGACGTCA -------------------------------------------------------------------------------- Time 4.54 secs. ******************************************************************************** ******************************************************************************** MOTIF RTGACGYC MEME-2 width = 8 sites = 87 llr = 662 E-value = 4.7e-036 ******************************************************************************** -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 Description -------------------------------------------------------------------------------- Simplified A 5::a:112 pos.-specific C ::::8:35 probability G 5:a::9:1 matrix T :a::2:61 bits 2.4 * * 2.1 * * 1.9 * * 1.7 *** Relative 1.4 *** Entropy 1.2 ***** (11.0 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel ATGACGTC consensus G T CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:12695828-12695908 72 1.27e-05 GGCAGGCCGC ATGACGTC A chr1:1790180-1790260 73 1.27e-05 acccttcccg atgacgtc chr19:50979510-50979590 47 1.27e-05 AGCGGGCTTT ATGACGTC ACACAAGAGC chr2:74781521-74781601 57 1.27e-05 CCTTGGGCAT ATGACGTC ACGCGCAGCC chr2:28114103-28114183 23 1.27e-05 CGTGCGCTGT ATGACGTC GACGTGACGC chr7:72395523-72395603 53 2.11e-05 TCGCGCGCGC ATGACGTA GAGGGCGCGC chr19:47987462-47987542 65 2.11e-05 GCGCGGGCTG ATGACGTA CGGAAGCT chr14:24768993-24769073 36 2.11e-05 GCGCGGAACT ATGACGTA GTAGCTGCGT chr19:50862208-50862288 64 2.11e-05 ACCTACCTGG ATGACGTA ATCATGGGC chr1:714044-714124 48 4.18e-05 GCGCACCCTT GTGACGTC ACAGGGGACT chr7:129592772-129592852 50 4.18e-05 CGTCACCTCT GTGACGTC ATCGGAGGGG chr7:65958531-65958611 11 4.18e-05 TAGCGCCACT GTGACGTC GCCGAAGGCC chr17:27071394-27071474 8 4.18e-05 GCGCCCC GTGACGTC ACGGGGAGGG chr19:36103568-36103648 61 4.18e-05 TGGCGCGCCC GTGACGTC AGAGGCGGGC chr9:33001608-33001688 55 4.18e-05 ATCGCGACCA GTGACGTC ACCAGCACCT chr14:23388103-23388183 67 4.18e-05 TCACGCATTG GTGACGTC TGGTGG chr5:176881623-176881703 51 4.18e-05 ACCTCGAGGC GTGACGTC ACCCTCCTCG chr8:21967209-21967289 66 4.18e-05 CGACAATCCG GTGACGTC ACGGAGG chr1:224180314-224180394 56 4.18e-05 GCGCGCTCTT GTGACGTC GCAGGGAACT chr4:119512815-119512895 49 4.18e-05 TGCGCCCTCC GTGACGTC ACAAGGGCGC chr6:139456057-139456137 56 4.18e-05 CGCGCGGGGC GTGACGTC ACGCGGGCGG chr12:64616329-64616409 52 4.18e-05 TCATGCAAAC GTGACGTC AGCCCTGGCC chr2:2577826-2577906 33 4.18e-05 tggtgatgtg gtgacgtc gtggtgatgt chr16:8618402-8618482 55 5.05e-05 catggtggtg atgatgtc atgatgtttg chr12:131248675-13124875 28 5.05e-05 ccttgtgttg atgatgtc ttggtattaa chr6:53213771-53213851 73 5.05e-05 ATCAAGCGCT ATGATGTC chr7:154609062-154609142 27 5.05e-05 CACAAAAGTC ATGATGTC ATTAACATCA chr19:47617003-47617083 69 5.05e-05 AACCCAGTCG ATGATGTC ATCA chr1:4052286-4052366 19 5.05e-05 caaaggggag atgatgtc atgggagagg chr12:131249888-13124996 3 5.05e-05 tg atgatgtc gtggtgatgt chr17:1196880-1196960 36 5.05e-05 gttgtgtttg atgatgtc gcaggttggg chr12:131249268-13124934 23 5.05e-05 tgtggtgttg atgatgtc acagtgttga chr9:6015601-6015681 66 8.27e-05 GCTCGAAGCA GTGACGTA GGCGAGG chr7:140624805-140624885 35 8.27e-05 ACCCCGGTGC GTGACGTA ATCTGAGGCG chr4:113558186-113558266 42 8.27e-05 CACCTCGCCT GTGACGTA GGTGGAGCGC chr5:61834580-61834660 5 9.14e-05 gtct atgacgtt tgcacaacag chr10:70939368-70939448 50 1.11e-04 AGCTGCTAGG ATGATGTA CGCAAACTGC chr1:228296969-228297049 54 1.11e-04 GTCGCGCGGT ATGACGTG TTCCATGGCA chr1:2111910-2111990 35 1.11e-04 ggacgcacag atgacgtg gacgcacaga chr1:230760016-230760096 13 1.11e-04 tcctcgcgct atgacgtg tgatatgacg chr9:140083014-140083094 15 1.23e-04 GCGCGCGGCG ATGACGCA CGTCTGCACG chr3:113775539-113775619 38 1.23e-04 GCGCCCAGTG ATGACGCA GTACTCCCTG chr11:111749926-11175000 30 1.23e-04 TCACTAGTTG ATGACGCA CCCATGGCGC chr8:125486868-125486948 73 1.23e-04 ACGCTGGATT ATGACGCA chr10:113943506-11394358 24 1.23e-04 GCGCACCCTG ATGACGCA ACCGGCGCGT chr19:46088249-46088329 73 1.37e-04 GTACTCCTTC GTGATGTC chr17:72510202-72510282 25 1.37e-04 catgtgatgg gtgatgtc atgtgatggg chr6:41888884-41888964 57 1.67e-04 GCACCCCTCG GTGACGCC TCCACTGACA chr7:44646066-44646146 13 1.67e-04 AGTCGGCGCT GTGACGCC CGGCGCGGCT chr4:120375814-120375894 45 1.67e-04 GCGCGCTCTT GTGACGCC ACGGAAGGCG chr9:99382167-99382247 64 1.67e-04 CAGGTACTCG GTGACGCC ATAAAGAAA chr11:77185408-77185488 2 1.67e-04 C GTGACGCC AGAGGCTGGG chr8:145682216-145682296 69 1.87e-04 CATCACAGAG ATGACATC ACAC chr19:39340936-39341016 64 1.87e-04 ACCAGTCACA ATGACGAC CTTCCCGCG chr20:33873640-33873720 16 1.87e-04 CAGCAagatg atgacgac gacaatgatg chr17:76554598-76554678 41 1.87e-04 TTGCATGTGT ATGACATC ATTGTCATCA chr19:39881337-39881417 52 2.02e-04 CTGGGGGCTG GTGACGTT GTTCAGCAGA chr13:45915338-45915418 66 2.46e-04 GACGCAGGCG GTGACGTG GCACGAA chr12:11501509-11501589 63 2.46e-04 gtgacgtgac gtgacgtg gcgtgatgtg chr5:1746709-1746789 35 2.46e-04 AAGTGGGAac gtgacgtg gacgtgacgt chr16:71879821-71879901 14 2.65e-04 CACCCCGGCC GTGACGCA ATCTCTCCGC chr17:685525-685605 68 2.65e-04 GCGCGCTTTC GTGACGCA GCCCG chr12:58138346-58138426 33 2.65e-04 GTTCCCGAGC GTGACGCA ATAACAAAAC chr8:23218247-23218327 34 2.85e-04 gacgatgatg atgatgTT TTAGTGACAC chr11:67195889-67195969 52 2.85e-04 TCGCGGAGAG ATGATGTT TAGGTCCGGG chr6:143381709-143381789 73 2.85e-04 CAGGAGCAGA ATGACGAA chr4:153457324-153457404 72 3.07e-04 GCGCGCTCTG ATGACGCT C chr6:3177116-3177196 9 3.67e-04 AGGCTGGG ATGATGCA GGTCTGATTA chrX:102024023-102024103 50 3.67e-04 ATTAGCGACG GTGACGAC TTTTTATTGA chr2:68290126-68290206 18 3.67e-04 GATGACGACA ATGACGCG CCGGCTCTGC chr7:75795876-75795956 10 3.67e-04 AGCGTCACT GTGACATC GCCGAAGGCC chr6:150255523-150255603 45 3.67e-04 TGAGACAATT GTGACATC ATGGTGGATG chr1:1655798-1655878 73 4.02e-04 TCTGCGCGGG ATGATGAC chr8:17104323-17104403 63 4.02e-04 GGGGCGCTAG ATGATGAC GCGACACGCA chr8:145682416-145682496 23 4.44e-04 CATGGGGGGA ATGACACC ATGGGGATGA chr12:56512273-56512353 44 4.44e-04 CCTCAGCTTG ATGACACC TGGAGCTCCA chrX:16737604-16737684 72 4.80e-04 TTGGACGGAA GTGACGCT T chr17:40419080-40419160 6 4.80e-04 ctcta gtgacgct gtagccatca chr1:16490950-16491030 56 5.39e-04 ttagagcagt atgacgat ggcacaagtt chr9:125027098-125027178 10 5.39e-04 AGGCCGCCC GTGACGCG TTAAGCCTGC chr3:184053612-184053692 72 5.39e-04 ACTTTGGGTG GTGACGCG G chrX:153607655-153607735 20 5.39e-04 GCCAGCGGCC GTGACGCG ACAACGATTC chr20:34203668-34203748 40 5.39e-04 GGCCAGCTCC GTGACGCG CGGCCAGGGC chr5:95297739-95297819 21 5.39e-04 TGACGTCTAG GTGACGCG CCAACTTAAT chr10:70848819-70848899 41 5.86e-04 TTGAGTCACA ATGACACA CATGTCCTAG chr18:77866839-77866919 24 5.86e-04 CACATGGTTG ATGACACA CTCTCCCCAC chr8:49838524-49838604 12 7.90e-04 ACAACAAATT ATGATGAT TTTATAAGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:12695828-12695908 1.3e-05 71_[+2]_1 chr1:1790180-1790260 1.3e-05 72_[+2] chr19:50979510-50979590 1.3e-05 46_[+2]_26 chr2:74781521-74781601 1.3e-05 56_[+2]_16 chr2:28114103-28114183 1.3e-05 22_[+2]_50 chr7:72395523-72395603 2.1e-05 52_[+2]_20 chr19:47987462-47987542 2.1e-05 64_[+2]_8 chr14:24768993-24769073 2.1e-05 35_[+2]_37 chr19:50862208-50862288 2.1e-05 63_[+2]_9 chr1:714044-714124 4.2e-05 47_[+2]_25 chr7:129592772-129592852 4.2e-05 49_[+2]_23 chr7:65958531-65958611 4.2e-05 10_[+2]_62 chr17:27071394-27071474 4.2e-05 7_[+2]_65 chr19:36103568-36103648 4.2e-05 60_[+2]_12 chr9:33001608-33001688 4.2e-05 54_[+2]_18 chr14:23388103-23388183 4.2e-05 66_[+2]_6 chr5:176881623-176881703 4.2e-05 50_[+2]_22 chr8:21967209-21967289 4.2e-05 65_[+2]_7 chr1:224180314-224180394 4.2e-05 55_[+2]_17 chr4:119512815-119512895 4.2e-05 48_[+2]_24 chr6:139456057-139456137 4.2e-05 55_[+2]_17 chr12:64616329-64616409 4.2e-05 51_[+2]_21 chr2:2577826-2577906 4.2e-05 32_[+2]_40 chr16:8618402-8618482 5e-05 54_[+2]_18 chr12:131248675-13124875 5e-05 27_[+2]_45 chr6:53213771-53213851 5e-05 72_[+2] chr7:154609062-154609142 5e-05 26_[+2]_46 chr19:47617003-47617083 5e-05 68_[+2]_4 chr1:4052286-4052366 5e-05 18_[+2]_54 chr12:131249888-13124996 5e-05 2_[+2]_70 chr17:1196880-1196960 5e-05 35_[+2]_37 chr12:131249268-13124934 5e-05 22_[+2]_50 chr9:6015601-6015681 8.3e-05 65_[+2]_7 chr7:140624805-140624885 8.3e-05 34_[+2]_38 chr4:113558186-113558266 8.3e-05 41_[+2]_31 chr5:61834580-61834660 9.1e-05 4_[+2]_68 chr10:70939368-70939448 0.00011 49_[+2]_23 chr1:228296969-228297049 0.00011 53_[+2]_19 chr1:2111910-2111990 0.00011 34_[+2]_38 chr1:230760016-230760096 0.00011 12_[+2]_60 chr9:140083014-140083094 0.00012 14_[+2]_58 chr3:113775539-113775619 0.00012 37_[+2]_35 chr11:111749926-11175000 0.00012 29_[+2]_43 chr8:125486868-125486948 0.00012 72_[+2] chr10:113943506-11394358 0.00012 23_[+2]_49 chr19:46088249-46088329 0.00014 72_[+2] chr17:72510202-72510282 0.00014 24_[+2]_48 chr6:41888884-41888964 0.00017 56_[+2]_16 chr7:44646066-44646146 0.00017 12_[+2]_60 chr4:120375814-120375894 0.00017 44_[+2]_28 chr9:99382167-99382247 0.00017 63_[+2]_9 chr11:77185408-77185488 0.00017 1_[+2]_71 chr8:145682216-145682296 0.00019 68_[+2]_4 chr19:39340936-39341016 0.00019 63_[+2]_9 chr20:33873640-33873720 0.00019 15_[+2]_57 chr17:76554598-76554678 0.00019 40_[+2]_32 chr19:39881337-39881417 0.0002 51_[+2]_21 chr13:45915338-45915418 0.00025 65_[+2]_7 chr12:11501509-11501589 0.00025 62_[+2]_10 chr5:1746709-1746789 0.00025 34_[+2]_38 chr16:71879821-71879901 0.00027 13_[+2]_59 chr17:685525-685605 0.00027 67_[+2]_5 chr12:58138346-58138426 0.00027 32_[+2]_40 chr8:23218247-23218327 0.00028 33_[+2]_39 chr11:67195889-67195969 0.00028 51_[+2]_21 chr6:143381709-143381789 0.00028 72_[+2] chr4:153457324-153457404 0.00031 71_[+2]_1 chr6:3177116-3177196 0.00037 8_[+2]_64 chrX:102024023-102024103 0.00037 49_[+2]_23 chr2:68290126-68290206 0.00037 17_[+2]_55 chr7:75795876-75795956 0.00037 9_[+2]_63 chr6:150255523-150255603 0.00037 44_[+2]_28 chr1:1655798-1655878 0.0004 72_[+2] chr8:17104323-17104403 0.0004 62_[+2]_10 chr8:145682416-145682496 0.00044 22_[+2]_50 chr12:56512273-56512353 0.00044 43_[+2]_29 chrX:16737604-16737684 0.00048 71_[+2]_1 chr17:40419080-40419160 0.00048 5_[+2]_67 chr1:16490950-16491030 0.00054 55_[+2]_17 chr9:125027098-125027178 0.00054 9_[+2]_63 chr3:184053612-184053692 0.00054 71_[+2]_1 chrX:153607655-153607735 0.00054 19_[+2]_53 chr20:34203668-34203748 0.00054 39_[+2]_33 chr5:95297739-95297819 0.00054 20_[+2]_52 chr10:70848819-70848899 0.00059 40_[+2]_32 chr18:77866839-77866919 0.00059 23_[+2]_49 chr8:49838524-49838604 0.00079 11_[+2]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RTGACGYC width=8 seqs=87 chr11:12695828-12695908 ( 72) ATGACGTC 1 chr1:1790180-1790260 ( 73) ATGACGTC 1 chr19:50979510-50979590 ( 47) ATGACGTC 1 chr2:74781521-74781601 ( 57) ATGACGTC 1 chr2:28114103-28114183 ( 23) ATGACGTC 1 chr7:72395523-72395603 ( 53) ATGACGTA 1 chr19:47987462-47987542 ( 65) ATGACGTA 1 chr14:24768993-24769073 ( 36) ATGACGTA 1 chr19:50862208-50862288 ( 64) ATGACGTA 1 chr1:714044-714124 ( 48) GTGACGTC 1 chr7:129592772-129592852 ( 50) GTGACGTC 1 chr7:65958531-65958611 ( 11) GTGACGTC 1 chr17:27071394-27071474 ( 8) GTGACGTC 1 chr19:36103568-36103648 ( 61) GTGACGTC 1 chr9:33001608-33001688 ( 55) GTGACGTC 1 chr14:23388103-23388183 ( 67) GTGACGTC 1 chr5:176881623-176881703 ( 51) GTGACGTC 1 chr8:21967209-21967289 ( 66) GTGACGTC 1 chr1:224180314-224180394 ( 56) GTGACGTC 1 chr4:119512815-119512895 ( 49) GTGACGTC 1 chr6:139456057-139456137 ( 56) GTGACGTC 1 chr12:64616329-64616409 ( 52) GTGACGTC 1 chr2:2577826-2577906 ( 33) GTGACGTC 1 chr16:8618402-8618482 ( 55) ATGATGTC 1 chr12:131248675-13124875 ( 28) ATGATGTC 1 chr6:53213771-53213851 ( 73) ATGATGTC 1 chr7:154609062-154609142 ( 27) ATGATGTC 1 chr19:47617003-47617083 ( 69) ATGATGTC 1 chr1:4052286-4052366 ( 19) ATGATGTC 1 chr12:131249888-13124996 ( 3) ATGATGTC 1 chr17:1196880-1196960 ( 36) ATGATGTC 1 chr12:131249268-13124934 ( 23) ATGATGTC 1 chr9:6015601-6015681 ( 66) GTGACGTA 1 chr7:140624805-140624885 ( 35) GTGACGTA 1 chr4:113558186-113558266 ( 42) GTGACGTA 1 chr5:61834580-61834660 ( 5) ATGACGTT 1 chr10:70939368-70939448 ( 50) ATGATGTA 1 chr1:228296969-228297049 ( 54) ATGACGTG 1 chr1:2111910-2111990 ( 35) ATGACGTG 1 chr1:230760016-230760096 ( 13) ATGACGTG 1 chr9:140083014-140083094 ( 15) ATGACGCA 1 chr3:113775539-113775619 ( 38) ATGACGCA 1 chr11:111749926-11175000 ( 30) ATGACGCA 1 chr8:125486868-125486948 ( 73) ATGACGCA 1 chr10:113943506-11394358 ( 24) ATGACGCA 1 chr19:46088249-46088329 ( 73) GTGATGTC 1 chr17:72510202-72510282 ( 25) GTGATGTC 1 chr6:41888884-41888964 ( 57) GTGACGCC 1 chr7:44646066-44646146 ( 13) GTGACGCC 1 chr4:120375814-120375894 ( 45) GTGACGCC 1 chr9:99382167-99382247 ( 64) GTGACGCC 1 chr11:77185408-77185488 ( 2) GTGACGCC 1 chr8:145682216-145682296 ( 69) ATGACATC 1 chr19:39340936-39341016 ( 64) ATGACGAC 1 chr20:33873640-33873720 ( 16) ATGACGAC 1 chr17:76554598-76554678 ( 41) ATGACATC 1 chr19:39881337-39881417 ( 52) GTGACGTT 1 chr13:45915338-45915418 ( 66) GTGACGTG 1 chr12:11501509-11501589 ( 63) GTGACGTG 1 chr5:1746709-1746789 ( 35) GTGACGTG 1 chr16:71879821-71879901 ( 14) GTGACGCA 1 chr17:685525-685605 ( 68) GTGACGCA 1 chr12:58138346-58138426 ( 33) GTGACGCA 1 chr8:23218247-23218327 ( 34) ATGATGTT 1 chr11:67195889-67195969 ( 52) ATGATGTT 1 chr6:143381709-143381789 ( 73) ATGACGAA 1 chr4:153457324-153457404 ( 72) ATGACGCT 1 chr6:3177116-3177196 ( 9) ATGATGCA 1 chrX:102024023-102024103 ( 50) GTGACGAC 1 chr2:68290126-68290206 ( 18) ATGACGCG 1 chr7:75795876-75795956 ( 10) GTGACATC 1 chr6:150255523-150255603 ( 45) GTGACATC 1 chr1:1655798-1655878 ( 73) ATGATGAC 1 chr8:17104323-17104403 ( 63) ATGATGAC 1 chr8:145682416-145682496 ( 23) ATGACACC 1 chr12:56512273-56512353 ( 44) ATGACACC 1 chrX:16737604-16737684 ( 72) GTGACGCT 1 chr17:40419080-40419160 ( 6) GTGACGCT 1 chr1:16490950-16491030 ( 56) ATGACGAT 1 chr9:125027098-125027178 ( 10) GTGACGCG 1 chr3:184053612-184053692 ( 72) GTGACGCG 1 chrX:153607655-153607735 ( 20) GTGACGCG 1 chr20:34203668-34203748 ( 40) GTGACGCG 1 chr5:95297739-95297819 ( 21) GTGACGCG 1 chr10:70848819-70848899 ( 41) ATGACACA 1 chr18:77866839-77866919 ( 24) ATGACACA 1 chr8:49838524-49838604 ( 12) ATGATGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.58084 E= 4.7e-036 145 -1309 59 -1309 -1309 -1309 -1309 232 -1309 -1309 168 -1309 237 -1309 -1309 -1309 -1309 143 -1309 4 -107 -1309 154 -1309 -107 8 -1309 157 25 85 -118 -96 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 87 E= 4.7e-036 0.528736 0.000000 0.471264 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.793103 0.000000 0.206897 0.091954 0.000000 0.908046 0.000000 0.091954 0.310345 0.000000 0.597701 0.229885 0.528736 0.137931 0.103448 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGACGYC MEME-2 regular expression -------------------------------------------------------------------------------- [AG]TGA[CT]G[TC][CA] -------------------------------------------------------------------------------- Time 7.93 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAYGTCA MEME-3 width = 8 sites = 23 llr = 211 E-value = 6.6e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a:2::a pos.-specific C :1:6::a: probability G :7::7::: matrix T a2:41a:: bits 2.4 * * * * 2.1 * * * * 1.9 * * * * 1.7 * * * * Relative 1.4 * * *** Entropy 1.2 * * *** (13.3 bits) 0.9 * ** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:33914232-33914312 46 2.15e-05 CGACGTTCTC TGACGTCA GAGTTTCCTG chr14:36278564-36278644 1 2.15e-05 . TGACGTCA AGAGTTCTTG chr16:8618402-8618482 34 2.15e-05 gttgtggtgg tgatgtca tggcatggtg chr7:154609062-154609142 56 2.15e-05 GAGTGATTTA TGATGTCA TGAACATTAT chr1:4052286-4052366 3 2.15e-05 gg tgatgtca aaggggagat chr2:74781521-74781601 19 2.15e-05 GCTTTCGGGG TGATGTCA TGGCTTTCAC chr12:131249888-13124996 71 2.15e-05 gtggtgttaa tgatgtca tg chr2:2577826-2577906 72 2.15e-05 ggtgaggtag tgatgtca t chr12:131249268-13124934 55 2.15e-05 gtcatggtgc tgatgtca tggtgttggt chr8:145682216-145682296 56 3.47e-05 CATCACGGAA TGACATCA CAGAGATGAC chr5:175964862-175964942 40 3.47e-05 AGCACCGCGC TGACATCA TGGCCCGGCC chr16:56574242-56574322 69 3.47e-05 aggactccgc tgacatca gctg chr6:150255523-150255603 72 3.47e-05 GAGACAATTG TGACATCA T chr1:9489010-9489090 6 4.85e-05 AGGGC TTACGTCA CGCAAGCGCC chr19:2962161-2962241 57 4.85e-05 cttatgtaaa ttacgtca acgaagcGCT chr17:72510202-72510282 60 4.85e-05 atgtgatgGg ttatgtca tgtgatgggt chr10:3356363-3356443 9 9.09e-05 GGGGACAG TGACTTCA CAGAGTGAGG chr5:78810406-78810486 24 9.09e-05 CACCCGCAGC TCACGTCA CCGAGGTGCG chr2:8144534-8144614 63 9.09e-05 CGTCATAGGC TGATTTCA AAATGTGGCT chr4:170541650-170541730 9 9.09e-05 ACGGCCGT TCACGTCA ACGTAGTGAC chr7:64541697-64541777 51 9.09e-05 GGGCCTTCTG TCACGTCA CAAGGGCTGT chr19:50837491-50837571 37 9.09e-05 TCCAGTCATA TTACATCA CTGTGGCGTC chr4:119512815-119512895 9 1.35e-04 gcCTTCCG TGACGTGA GGCTTCCGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:33914232-33914312 2.1e-05 45_[+3]_27 chr14:36278564-36278644 2.1e-05 [+3]_72 chr16:8618402-8618482 2.1e-05 33_[+3]_39 chr7:154609062-154609142 2.1e-05 55_[+3]_17 chr1:4052286-4052366 2.1e-05 2_[+3]_70 chr2:74781521-74781601 2.1e-05 18_[+3]_54 chr12:131249888-13124996 2.1e-05 70_[+3]_2 chr2:2577826-2577906 2.1e-05 71_[+3]_1 chr12:131249268-13124934 2.1e-05 54_[+3]_18 chr8:145682216-145682296 3.5e-05 55_[+3]_17 chr5:175964862-175964942 3.5e-05 39_[+3]_33 chr16:56574242-56574322 3.5e-05 68_[+3]_4 chr6:150255523-150255603 3.5e-05 71_[+3]_1 chr1:9489010-9489090 4.8e-05 5_[+3]_67 chr19:2962161-2962241 4.8e-05 56_[+3]_16 chr17:72510202-72510282 4.8e-05 59_[+3]_13 chr10:3356363-3356443 9.1e-05 8_[+3]_64 chr5:78810406-78810486 9.1e-05 23_[+3]_49 chr2:8144534-8144614 9.1e-05 62_[+3]_10 chr4:170541650-170541730 9.1e-05 8_[+3]_64 chr7:64541697-64541777 9.1e-05 50_[+3]_22 chr19:50837491-50837571 9.1e-05 36_[+3]_36 chr4:119512815-119512895 0.00014 8_[+3]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAYGTCA width=8 seqs=23 chr17:33914232-33914312 ( 46) TGACGTCA 1 chr14:36278564-36278644 ( 1) TGACGTCA 1 chr16:8618402-8618482 ( 34) TGATGTCA 1 chr7:154609062-154609142 ( 56) TGATGTCA 1 chr1:4052286-4052366 ( 3) TGATGTCA 1 chr2:74781521-74781601 ( 19) TGATGTCA 1 chr12:131249888-13124996 ( 71) TGATGTCA 1 chr2:2577826-2577906 ( 72) TGATGTCA 1 chr12:131249268-13124934 ( 55) TGATGTCA 1 chr8:145682216-145682296 ( 56) TGACATCA 1 chr5:175964862-175964942 ( 40) TGACATCA 1 chr16:56574242-56574322 ( 69) TGACATCA 1 chr6:150255523-150255603 ( 72) TGACATCA 1 chr1:9489010-9489090 ( 6) TTACGTCA 1 chr19:2962161-2962241 ( 57) TTACGTCA 1 chr17:72510202-72510282 ( 60) TTATGTCA 1 chr10:3356363-3356443 ( 9) TGACTTCA 1 chr5:78810406-78810486 ( 24) TCACGTCA 1 chr2:8144534-8144614 ( 63) TGATTTCA 1 chr4:170541650-170541730 ( 9) TCACGTCA 1 chr7:64541697-64541777 ( 51) TCACGTCA 1 chr19:50837491-50837571 ( 37) TTACATCA 1 chr4:119512815-119512895 ( 9) TGACGTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.1915 E= 6.6e-002 -1117 -1117 -1117 232 -1117 -117 115 -21 237 -1117 -1117 -1117 -1117 105 -1117 96 17 -1117 115 -121 -1117 -1117 -1117 232 -1117 170 -284 -1117 237 -1117 -1117 -1117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 23 E= 6.6e-002 0.000000 0.000000 0.000000 1.000000 0.000000 0.130435 0.695652 0.173913 1.000000 0.000000 0.000000 0.000000 0.000000 0.608696 0.000000 0.391304 0.217391 0.000000 0.695652 0.086957 0.000000 0.000000 0.000000 1.000000 0.000000 0.956522 0.043478 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAYGTCA MEME-3 regular expression -------------------------------------------------------------------------------- TGA[CT][GA]TCA -------------------------------------------------------------------------------- Time 11.10 secs. ******************************************************************************** ******************************************************************************** MOTIF RCGTCAYC MEME-4 width = 8 sites = 32 llr = 269 E-value = 4.2e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 4::::a:2 pos.-specific C :a::a:65 probability G 6:a::::2 matrix T :::a::41 bits 2.4 * * 2.1 * * 1.9 * * 1.7 ***** Relative 1.4 ***** Entropy 1.2 ***** (12.1 bits) 0.9 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel GCGTCACC consensus A T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:237994477-237994557 50 1.20e-05 GCGGCTTTAA ACGTCATC GCGGGCGCGA chr19:36119894-36119974 55 1.20e-05 CTTTTGCTGG ACGTCATC CTCGGGAGCC chr13:45915338-45915418 27 1.20e-05 ACGTCCCTCT ACGTCATC GCCCGCTGCG chr11:78063336-78063416 50 1.20e-05 ATCTCATACC ACGTCATC CCCGTTACAT chr18:76829159-76829239 37 1.20e-05 CACCCTGGGC ACGTCATC GTGCGCCGAC chr7:1199837-1199917 20 2.95e-05 CGCCCCGACA ACGTCACC CGCAGACCGG chr5:78810406-78810486 10 2.95e-05 TCCGCACAC ACGTCACC CGCAGCTCAC chr10:79803627-79803707 65 2.95e-05 gtagcctaac acgtcacc atgcctac chr2:190305769-190305849 36 4.89e-05 CGAGAGGCTC GCGTCATC CTGCAGCGCC chr19:16683281-16683361 14 4.89e-05 CTGCCTCCTC GCGTCATC CCTCCGCGCC chrX:347692-347772 10 4.89e-05 CACTGCGTC GCGTCATC GCGACGATGT chr4:8442462-8442542 40 4.89e-05 CCACCGGGCT GCGTCATC TCGGCGCGCC chr17:42264256-42264336 37 4.89e-05 ACGCAGCTTC GCGTCATC AGTGCAAGGC chr14:61447761-61447841 69 4.89e-05 AAGAGGGCGC GCGTCATC AGAT chr13:49821986-49822066 56 4.89e-05 CAAGCTTGAG GCGTCATC TGGCTGCGCC chr4:170533705-170533785 52 7.73e-05 AGCGGCCGGC GCGTCACC GGCGCTGGCG chr12:10766147-10766227 66 7.73e-05 CGGAATAAGT GCGTCACC ACAGGCG chr6:27440193-27440273 50 9.66e-05 TCAGCAGCAT ACGTCACA CAATCACACA chr7:65235824-65235904 54 9.66e-05 GCCTTCTGCC ACGTCACA AGGGCTGTAC chr3:141594908-141594988 24 9.66e-05 TCCTGTAGGA ACGTCACA GAGCCCAGAG chr22:50683415-50683495 17 1.28e-04 CGCCTCCGTC GCGTCACA GCCGCGCCAG chr3:154042321-154042401 9 1.28e-04 GCCATTTA GCGTCACA AGCAGTGGTT chr19:9649292-9649372 17 1.28e-04 CTCACAGCCG GCGTCACA AAAGGAACGG chr4:104119608-104119688 1 1.41e-04 . ACGTCATG GGCCATTCCA chr14:23388103-23388183 54 1.59e-04 CCGTGCAGCA ACGTCACG CATTGGTGAC chr19:50862208-50862288 37 1.88e-04 CGTCACTATG GCGTCATG GTGATGGCCA chr3:58291924-58292004 60 2.30e-04 ATCCGCCTGG GCGTCACG CTTCGTGGGG chr11:4115972-4116052 65 2.30e-04 GCCCCTTTGT GCGTCACG GGTGGCGG chr4:120375814-120375894 73 2.30e-04 CGCTCTTGCG GCGTCACG chr19:46088249-46088329 55 2.30e-04 GCCTTGGCCA ACGTCACT GTACTCCTTC chr7:75795876-75795956 2 2.63e-04 A GCGTCACT GTGACATCGC chr11:77185408-77185488 54 2.63e-04 TCATCGCGTC GCGTCACT GTTCTCGGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:237994477-237994557 1.2e-05 49_[+4]_23 chr19:36119894-36119974 1.2e-05 54_[+4]_18 chr13:45915338-45915418 1.2e-05 26_[+4]_46 chr11:78063336-78063416 1.2e-05 49_[+4]_23 chr18:76829159-76829239 1.2e-05 36_[+4]_36 chr7:1199837-1199917 2.9e-05 19_[+4]_53 chr5:78810406-78810486 2.9e-05 9_[+4]_63 chr10:79803627-79803707 2.9e-05 64_[+4]_8 chr2:190305769-190305849 4.9e-05 35_[+4]_37 chr19:16683281-16683361 4.9e-05 13_[+4]_59 chrX:347692-347772 4.9e-05 9_[+4]_63 chr4:8442462-8442542 4.9e-05 39_[+4]_33 chr17:42264256-42264336 4.9e-05 36_[+4]_36 chr14:61447761-61447841 4.9e-05 68_[+4]_4 chr13:49821986-49822066 4.9e-05 55_[+4]_17 chr4:170533705-170533785 7.7e-05 51_[+4]_21 chr12:10766147-10766227 7.7e-05 65_[+4]_7 chr6:27440193-27440273 9.7e-05 49_[+4]_23 chr7:65235824-65235904 9.7e-05 53_[+4]_19 chr3:141594908-141594988 9.7e-05 23_[+4]_49 chr22:50683415-50683495 0.00013 16_[+4]_56 chr3:154042321-154042401 0.00013 8_[+4]_64 chr19:9649292-9649372 0.00013 16_[+4]_56 chr4:104119608-104119688 0.00014 [+4]_72 chr14:23388103-23388183 0.00016 53_[+4]_19 chr19:50862208-50862288 0.00019 36_[+4]_36 chr3:58291924-58292004 0.00023 59_[+4]_13 chr11:4115972-4116052 0.00023 64_[+4]_8 chr4:120375814-120375894 0.00023 72_[+4] chr19:46088249-46088329 0.00023 54_[+4]_18 chr7:75795876-75795956 0.00026 1_[+4]_71 chr11:77185408-77185488 0.00026 53_[+4]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCGTCAYC width=8 seqs=32 chr2:237994477-237994557 ( 50) ACGTCATC 1 chr19:36119894-36119974 ( 55) ACGTCATC 1 chr13:45915338-45915418 ( 27) ACGTCATC 1 chr11:78063336-78063416 ( 50) ACGTCATC 1 chr18:76829159-76829239 ( 37) ACGTCATC 1 chr7:1199837-1199917 ( 20) ACGTCACC 1 chr5:78810406-78810486 ( 10) ACGTCACC 1 chr10:79803627-79803707 ( 65) ACGTCACC 1 chr2:190305769-190305849 ( 36) GCGTCATC 1 chr19:16683281-16683361 ( 14) GCGTCATC 1 chrX:347692-347772 ( 10) GCGTCATC 1 chr4:8442462-8442542 ( 40) GCGTCATC 1 chr17:42264256-42264336 ( 37) GCGTCATC 1 chr14:61447761-61447841 ( 69) GCGTCATC 1 chr13:49821986-49822066 ( 56) GCGTCATC 1 chr4:170533705-170533785 ( 52) GCGTCACC 1 chr12:10766147-10766227 ( 66) GCGTCACC 1 chr6:27440193-27440273 ( 50) ACGTCACA 1 chr7:65235824-65235904 ( 54) ACGTCACA 1 chr3:141594908-141594988 ( 24) ACGTCACA 1 chr22:50683415-50683495 ( 17) GCGTCACA 1 chr3:154042321-154042401 ( 9) GCGTCACA 1 chr19:9649292-9649372 ( 17) GCGTCACA 1 chr4:104119608-104119688 ( 1) ACGTCATG 1 chr14:23388103-23388183 ( 54) ACGTCACG 1 chr19:50862208-50862288 ( 37) GCGTCATG 1 chr3:58291924-58292004 ( 60) GCGTCACG 1 chr11:4115972-4116052 ( 65) GCGTCACG 1 chr4:120375814-120375894 ( 73) GCGTCACG 1 chr19:46088249-46088329 ( 55) ACGTCACT 1 chr7:75795876-75795956 ( 2) GCGTCACT 1 chr11:77185408-77185488 ( 54) GCGTCACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.4765 E= 4.2e-001 118 -1164 85 -1164 -1164 177 -1164 -1164 -1164 -1164 168 -1164 -1164 -1164 -1164 232 -1164 177 -1164 -1164 237 -1164 -1164 -1164 -1164 94 -1164 112 -4 86 -74 -110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 32 E= 4.2e-001 0.437500 0.000000 0.562500 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.562500 0.000000 0.437500 0.187500 0.531250 0.187500 0.093750 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCGTCAYC MEME-4 regular expression -------------------------------------------------------------------------------- [GA]CGTCA[CT]C -------------------------------------------------------------------------------- Time 14.24 secs. ******************************************************************************** ******************************************************************************** MOTIF AAATACAA MEME-5 width = 8 sites = 2 llr = 25 E-value = 7.1e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A aaa:a:aa pos.-specific C :::::a:: probability G :::::::: matrix T :::a:::: bits 2.4 ***** ** 2.1 ***** ** 1.9 ***** ** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (18.3 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAATACAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:98048381-98048461 41 3.05e-06 CGTCATCAGC AAATACAA GCAGTCATAG chr11:65270348-65270428 52 3.05e-06 AATTGATGAG AAATACAA TGAAGAGGCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:98048381-98048461 3.1e-06 40_[+5]_32 chr11:65270348-65270428 3.1e-06 51_[+5]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAATACAA width=8 seqs=2 chr7:98048381-98048461 ( 41) AAATACAA 1 chr11:65270348-65270428 ( 52) AAATACAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 7.1e+003 237 -765 -765 -765 237 -765 -765 -765 237 -765 -765 -765 -765 -765 -765 231 237 -765 -765 -765 -765 176 -765 -765 237 -765 -765 -765 237 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 7.1e+003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATACAA MEME-5 regular expression -------------------------------------------------------------------------------- AAATACAA -------------------------------------------------------------------------------- Time 17.33 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:17462791-17462871 7.07e-07 17_[+1(1.27e-05)]_55 chr12:131249268-13124934 9.56e-06 23_[+1(2.15e-05)]_9_[+1(2.15e-05)]_\ 6_[+1(2.15e-05)]_18 chr17:1196880-1196960 1.34e-05 13_[+2(5.05e-05)]_14_[+2(5.05e-05)]_\ 15_[+1(2.15e-05)]_14 chr2:2577826-2577906 1.15e-05 3_[+1(2.15e-05)]_21_[+2(4.18e-05)]_\ 31_[+1(2.15e-05)]_1 chr2:19548160-19548240 5.07e-07 48_[+1(1.27e-05)]_24 chr6:43878033-43878113 2.77e-01 80 chr12:131249888-13124996 1.34e-05 2_[+2(5.05e-05)]_4_[+1(2.15e-05)]_\ 48_[+1(2.15e-05)]_2 chr17:79093598-79093678 4.67e-06 47_[+1(2.15e-05)]_25 chr12:64616329-64616409 4.57e-07 36_[+1(1.27e-05)]_8_[+1(1.27e-05)]_\ 20 chr3:141594908-141594988 2.03e-01 23_[+4(9.66e-05)]_24_[+4(9.66e-05)]_\ 17 chr7:30174233-30174313 1.92e-07 51_[+1(1.27e-05)]_21 chr6:139456057-139456137 2.96e-07 19_[+1(1.27e-05)]_29_[+1(1.27e-05)]_\ 16 chr5:95297739-95297819 5.29e-06 44_[+1(1.27e-05)]_28 chr19:17728292-17728372 2.52e-06 34_[+1(1.27e-05)]_38 chr2:28114103-28114183 4.89e-07 22_[+2(1.27e-05)]_37_[+1(1.27e-05)]_\ 5 chr11:77185408-77185488 8.80e-08 40_[+4(1.20e-05)]_32 chr4:119512815-119512895 5.16e-07 8_[+1(9.34e-05)]_8_[+1(1.27e-05)]_\ 17_[+1(1.27e-05)]_23 chr2:74781521-74781601 6.41e-08 18_[+1(2.15e-05)]_12_[+1(1.27e-05)]_\ 11_[+1(1.27e-05)]_15 chr19:50979510-50979590 9.14e-08 20_[+1(1.27e-05)]_19_[+1(1.27e-05)]_\ 25 chr17:76554598-76554678 1.84e-05 19_[+1(2.93e-05)]_14_[+1(2.93e-05)]_\ 31 chr1:4052286-4052366 1.07e-05 2_[+1(2.15e-05)]_9_[+1(2.15e-05)]_9_\ [+1(2.15e-05)]_8_[+1(2.15e-05)]_8_[+1(2.15e-05)]_4 chr6:15248930-15249010 4.20e-07 44_[+1(1.27e-05)]_28 chr1:224180314-224180394 1.13e-07 31_[+1(1.27e-05)]_16_[+2(4.18e-05)]_\ 17 chr14:68086472-68086552 9.11e-01 80 chr16:86588795-86588875 1.94e-07 45_[+1(1.27e-05)]_27 chr19:51506071-51506151 3.77e-07 52_[+1(1.27e-05)]_20 chr6:143381709-143381789 4.29e-01 80 chr14:55738804-55738884 2.31e-06 44_[+1(1.27e-05)]_28 chr19:50862208-50862288 3.09e-07 23_[+1(1.27e-05)]_3_[+1(6.65e-05)]_\ 21_[+2(2.11e-05)]_9 chr7:5492769-5492849 1.28e-07 55_[+1(1.27e-05)]_17 chr6:150255523-150255603 5.70e-05 19_[+1(2.93e-05)]_18_[+1(2.93e-05)]_\ 18_[+1(2.93e-05)]_1 chr20:34203668-34203748 8.03e-07 20_[+1(1.27e-05)]_52 chr13:49821986-49822066 1.06e-07 13_[+1(1.27e-05)]_34_[+4(4.89e-05)]_\ 17 chr12:58138346-58138426 3.46e-06 54_[+4(4.89e-05)]_18 chr7:45808631-45808711 2.51e-07 23_[+1(1.27e-05)]_49 chr8:21967209-21967289 8.80e-08 2_[+4(1.20e-05)]_56_[+1(1.27e-05)]_\ 6 chr18:76829159-76829239 1.46e-02 36_[+4(1.20e-05)]_36 chr7:65235824-65235904 5.16e-07 26_[+1(1.27e-05)]_19_[+4(9.66e-05)]_\ 19 chr8:49838524-49838604 6.17e-09 51_[+4(1.20e-05)]_21 chr18:77439710-77439790 6.08e-06 71_[+1(1.27e-05)]_1 chr19:50837491-50837571 3.38e-05 36_[+3(9.09e-05)]_3_[+1(6.65e-05)]_\ 25 chr5:176881623-176881703 9.14e-08 51_[+1(1.27e-05)]_10_[+1(1.27e-05)]_\ 3 chr6:27440193-27440273 4.84e-05 34_[+1(6.65e-05)]_7_[+4(9.66e-05)]_\ 23 chr14:23388103-23388183 7.84e-07 24_[+1(1.27e-05)]_34_[+2(4.18e-05)]_\ 6 chrX:48659870-48659950 6.29e-01 80 chr21:43430394-43430474 1.27e-06 70_[+4(1.20e-05)]_2 chr14:24768993-24769073 3.30e-03 35_[+2(2.11e-05)]_37 chr7:64541697-64541777 5.16e-07 25_[+1(1.27e-05)]_17_[+3(9.09e-05)]_\ 22 chr17:38136737-38136817 8.80e-08 25_[+4(1.20e-05)]_47 chr9:33001608-33001688 7.06e-08 24_[+1(1.27e-05)]_23_[+1(1.27e-05)]_\ 17 chr22:39097055-39097135 8.84e-07 6_[+1(4.59e-05)]_5_[+4(1.20e-05)]_\ 53 chr10:113943506-11394358 6.09e-02 80 chr20:33873640-33873720 8.76e-02 80 chr14:32030551-32030631 1.72e-08 31_[+4(1.20e-05)]_41 chr19:47617003-47617083 1.07e-06 44_[+1(1.27e-05)]_17_[+1(2.15e-05)]_\ 3 chr11:95523556-95523636 9.14e-08 10_[+1(1.27e-05)]_62 chr19:36103568-36103648 4.03e-07 38_[+1(1.27e-05)]_15_[+1(1.27e-05)]_\ 11 chr2:96068406-96068486 5.28e-07 28_[+1(1.27e-05)]_44 chr14:61447761-61447841 3.05e-06 35_[+1(2.93e-05)]_25_[+4(4.89e-05)]_\ 4 chr6:34664732-34664812 4.71e-04 80 chr17:27071394-27071474 1.86e-07 8_[+1(1.27e-05)]_10_[+1(1.27e-05)]_\ 46 chr1:156698646-156698726 1.19e-03 54_[+2(4.18e-05)]_18 chr9:99382167-99382247 1.58e-07 22_[+1(1.27e-05)]_50 chr17:40419080-40419160 2.85e-02 80 chr19:46135951-46136031 5.16e-07 35_[+1(1.27e-05)]_37 chr7:137686957-137687037 1.76e-07 46_[+1(1.27e-05)]_26 chr4:170541650-170541730 7.84e-07 8_[+3(9.09e-05)]_6_[+1(1.27e-05)]_\ 50 chr17:72510202-72510282 1.33e-05 8_[+1(2.15e-05)]_9_[+1(2.15e-05)]_\ 26_[+3(4.85e-05)]_13 chr7:75795876-75795956 1.21e-06 60_[+1(1.27e-05)]_12 chr19:46503040-46503120 1.34e-05 17_[+1(2.15e-05)]_55 chr1:6320114-6320194 2.51e-07 51_[+1(1.27e-05)]_21 chr7:154609062-154609142 9.14e-08 10_[+1(1.27e-05)]_9_[+1(2.15e-05)]_\ 20_[+1(2.15e-05)]_17 chr19:49142337-49142417 6.39e-07 24_[+1(1.27e-05)]_48 chr3:52444017-52444097 2.06e-03 24_[+4(2.95e-05)]_48 chr2:68290126-68290206 1.68e-03 80 chr3:72102117-72102197 3.02e-07 8_[+1(1.27e-05)]_64 chr19:45946750-45946830 8.03e-07 26_[+1(1.27e-05)]_46 chr5:1746709-1746789 5.27e-04 64_[+1(9.34e-05)]_8 chr1:230760016-230760096 4.80e-07 37_[+1(1.27e-05)]_35 chr6:38607899-38607979 4.28e-04 55_[+1(6.65e-05)]_17 chr14:105219422-10521950 7.84e-07 49_[+1(1.27e-05)]_23 chr4:187125480-187125560 3.81e-01 80 chr1:145439532-145439612 3.81e-01 80 chr6:44355172-44355252 5.07e-07 18_[+1(1.27e-05)]_54 chr6:53213771-53213851 4.20e-07 17_[+1(1.27e-05)]_47_[+2(5.05e-05)] chr7:65958531-65958611 8.43e-07 10_[+2(4.18e-05)]_43_[+1(1.27e-05)]_\ 11 chr19:46088249-46088329 7.38e-03 80 chrX:48432378-48432458 6.06e-05 17_[+1(2.93e-05)]_55 chr1:46806777-46806857 1.92e-03 44_[+4(4.89e-05)]_28 chr7:39772946-39773026 7.97e-07 22_[+1(1.27e-05)]_50 chrX:153607655-153607735 9.74e-02 80 chr10:23344494-23344574 2.63e-01 80 chr8:125486868-125486948 1.64e-03 80 chr17:42264256-42264336 7.78e-05 9_[+1(3.75e-05)]_19_[+4(4.89e-05)]_\ 36 chr16:56574242-56574322 1.23e-05 40_[+1(1.27e-05)]_20_[+1(2.93e-05)]_\ 4 chr11:3818987-3819067 5.16e-07 50_[+1(1.27e-05)]_22 chr17:40829262-40829342 8.03e-07 63_[+1(1.27e-05)]_9 chr3:184053612-184053692 1.81e-03 39_[+2(4.18e-05)]_33 chr4:8442462-8442542 1.06e-07 11_[+1(1.27e-05)]_20_[+4(4.89e-05)]_\ 33 chr1:32110242-32110322 5.33e-04 23_[+1(9.34e-05)]_49 chr12:10766147-10766227 4.23e-08 44_[+4(1.20e-05)]_13_[+4(7.73e-05)]_\ 7 chr8:145597037-145597117 8.22e-01 80 chr10:79803627-79803707 2.50e-04 64_[+4(2.95e-05)]_8 chr5:137673175-137673255 2.47e-07 19_[+1(2.15e-05)]_53 chr19:51182767-51182847 1.91e-07 52_[+1(1.27e-05)]_20 chr20:30192153-30192233 4.20e-07 12_[+1(1.27e-05)]_60 chr12:11501509-11501589 6.35e-04 28_[+1(9.34e-05)]_2_[+1(9.34e-05)]_\ 2_[+1(9.34e-05)]_2_[+1(9.34e-05)]_14 chr19:51111360-51111440 1.89e-07 42_[+1(1.27e-05)]_30 chr16:89766720-89766800 8.19e-08 32_[+4(1.20e-05)]_40 chr8:17104323-17104403 5.22e-02 80 chr19:9649292-9649372 2.01e-06 42_[+1(1.27e-05)]_30 chr10:1205651-1205731 6.30e-01 80 chr11:65270348-65270428 4.14e-03 51_[+5(3.05e-06)]_21 chr17:57920555-57920635 8.63e-01 80 chrX:39552698-39552778 2.58e-08 25_[+4(1.20e-05)]_47 chr4:153457324-153457404 2.35e-01 80 chr4:120375814-120375894 8.03e-07 20_[+1(1.27e-05)]_52 chr1:65690419-65690499 1.91e-07 23_[+1(1.27e-05)]_49 chr19:2962161-2962241 1.01e-08 39_[+4(1.20e-05)]_9_[+1(3.75e-05)]_\ 16 chr19:56015258-56015338 5.28e-07 23_[+1(1.27e-05)]_49 chr4:113558186-113558266 4.89e-02 41_[+2(8.27e-05)]_31 chr20:3801368-3801448 4.71e-04 33_[+1(4.59e-05)]_39 chr18:77866839-77866919 8.39e-07 49_[+1(1.27e-05)]_23 chr17:73772899-73772979 4.90e-01 80 chr12:125398662-12539874 1.58e-07 19_[+1(1.27e-05)]_53 chr11:61731642-61731722 6.87e-01 80 chr11:4115972-4116052 8.12e-04 80 chr19:59055510-59055590 9.54e-01 80 chr2:8144534-8144614 1.09e-07 49_[+1(1.27e-05)]_5_[+3(9.09e-05)]_\ 10 chr9:111696364-111696444 1.76e-07 50_[+1(1.27e-05)]_22 chr1:243265038-243265118 7.84e-07 49_[+1(1.27e-05)]_23 chrX:347692-347772 1.61e-03 9_[+4(4.89e-05)]_63 chr3:154042321-154042401 6.53e-07 31_[+1(1.27e-05)]_41 chr19:47987462-47987542 4.21e-02 64_[+2(2.11e-05)]_8 chr2:178088925-178089005 7.61e-01 80 chr11:69259209-69259289 5.45e-04 71_[+1(9.34e-05)]_1 chr17:7835459-7835539 9.01e-08 32_[+4(1.20e-05)]_40 chr17:685525-685605 1.07e-06 36_[+1(1.27e-05)]_36 chr10:70848819-70848899 6.06e-03 80 chr7:44646066-44646146 8.03e-07 33_[+1(1.27e-05)]_39 chr18:2655107-2655187 5.28e-07 47_[+1(1.27e-05)]_25 chr12:131248675-13124875 8.48e-07 10_[+2(5.05e-05)]_9_[+2(5.05e-05)]_\ 21_[+1(1.27e-05)]_16 chr7:72395523-72395603 4.63e-03 52_[+2(2.11e-05)]_20 chrX:133941143-133941223 4.39e-07 16_[+1(1.27e-05)]_56 chrX:102024023-102024103 2.64e-06 30_[+1(1.27e-05)]_42 chr16:71879821-71879901 2.44e-03 80 chr19:35225419-35225499 4.56e-03 70_[+1(9.34e-05)]_2 chr12:31882019-31882099 5.24e-07 24_[+1(1.27e-05)]_48 chr3:158288870-158288950 3.33e-07 29_[+1(1.27e-05)]_43 chr10:111971019-11197109 1.15e-05 53_[+1(1.27e-05)]_19 chr7:140396403-140396483 8.03e-07 51_[+1(1.27e-05)]_21 chr1:2111910-2111990 3.53e-02 80 chr19:7553856-7553936 1.89e-07 50_[+1(1.27e-05)]_22 chr19:16683281-16683361 6.62e-02 13_[+4(4.89e-05)]_59 chr11:78063336-78063416 1.87e-03 49_[+4(1.20e-05)]_23 chr13:45915338-45915418 1.15e-04 26_[+4(1.20e-05)]_46 chr5:175964862-175964942 6.89e-08 7_[+1(1.27e-05)]_24_[+1(2.93e-05)]_\ 33 chrX:19362010-19362090 6.16e-04 5_[+2(9.14e-05)]_67 chr19:996495-996575 7.14e-08 56_[+4(1.20e-05)]_16 chr16:3285180-3285260 5.16e-07 23_[+1(1.27e-05)]_49 chr7:1458201-1458281 1.60e-06 49_[+1(1.27e-05)]_23 chr9:100395601-100395681 1.54e-07 45_[+1(1.27e-05)]_27 chr19:51373798-51373878 2.64e-07 43_[+1(1.27e-05)]_29 chr4:57253652-57253732 5.97e-06 25_[+1(1.27e-05)]_47 chr22:50683415-50683495 3.78e-03 80 chr14:50053207-50053287 2.67e-09 39_[+1(1.27e-05)]_33 chr12:133022758-13302283 3.31e-08 40_[+1(1.27e-05)]_32 chr1:1790180-1790260 6.61e-02 72_[+2(1.27e-05)] chr1:2343990-2344070 1.17e-02 80 chr1:228296969-228297049 3.97e-04 80 chr17:73772206-73772286 4.76e-01 80 chr12:27396983-27397063 1.42e-06 65_[+1(1.27e-05)]_7 chr19:36119894-36119974 2.96e-08 19_[+1(1.27e-05)]_27_[+4(1.20e-05)]_\ 18 chr11:12695828-12695908 7.06e-08 19_[+1(1.27e-05)]_45_[+1(1.27e-05)] chr11:67195889-67195969 6.53e-04 16_[+4(7.73e-05)]_56 chr3:38206499-38206579 5.20e-07 30_[+1(1.27e-05)]_42 chr2:237994477-237994557 8.97e-03 49_[+4(1.20e-05)]_23 chr5:78810406-78810486 2.23e-07 9_[+4(2.95e-05)]_8_[+4(2.95e-05)]_\ 13_[+1(2.15e-05)]_26 chr5:159436008-159436088 6.11e-08 22_[+1(1.27e-05)]_50 chr10:35484698-35484778 3.69e-05 5_[+1(2.15e-05)]_67 chr19:46009781-46009861 5.20e-07 48_[+1(1.27e-05)]_24 chr6:32164324-32164404 9.14e-08 41_[+1(1.27e-05)]_31 chr7:98048381-98048461 5.86e-11 29_[+4(1.20e-05)]_3_[+5(3.05e-06)]_\ 32 chr7:140624805-140624885 1.76e-07 17_[+1(1.27e-05)]_10_[+1(4.59e-05)]_\ 37 chr3:32115896-32115976 4.22e-01 80 chr7:55433945-55434025 5.28e-07 51_[+1(1.27e-05)]_21 chr2:96676234-96676314 1.94e-07 57_[+1(1.27e-05)]_15 chr10:124740025-12474010 6.46e-01 80 chr11:111749926-11175000 3.21e-02 80 chr16:8618402-8618482 1.34e-05 [+1(2.15e-05)]_25_[+1(2.15e-05)]_14_\ [+1(2.15e-05)]_17 chr5:61834580-61834660 4.46e-02 4_[+2(9.14e-05)]_68 chr14:36278564-36278644 1.04e-05 [+1(1.27e-05)]_8_[+1(1.27e-05)]_56 chr19:2945343-2945423 1.89e-07 58_[+1(1.27e-05)]_14 chr6:41888884-41888964 1.68e-05 69_[+1(2.93e-05)]_3 chr16:19079076-19079156 6.88e-01 80 chr1:70671285-70671365 7.09e-01 80 chr20:44420554-44420634 7.84e-07 23_[+1(1.27e-05)]_49 chr19:9546218-9546298 7.79e-08 40_[+1(1.27e-05)]_32 chr1:9489010-9489090 7.14e-08 5_[+1(3.75e-05)]_21_[+4(1.20e-05)]_\ 38 chr7:129592772-129592852 9.01e-08 36_[+1(1.27e-05)]_8_[+4(1.20e-05)]_\ 20 chr9:125027098-125027178 8.03e-07 44_[+1(1.27e-05)]_28 chr11:65192130-65192210 3.66e-01 80 chr7:23571628-23571708 7.31e-07 39_[+1(1.27e-05)]_33 chr10:70939368-70939448 3.70e-02 80 chr12:120729905-12072998 1.68e-07 35_[+1(1.27e-05)]_37 chr7:1199837-1199917 2.11e-02 19_[+4(2.95e-05)]_53 chr4:170533705-170533785 4.28e-07 51_[+4(7.73e-05)]_12_[+1(1.27e-05)]_\ 1 chr19:39340936-39341016 1.26e-01 80 chr12:56512273-56512353 5.16e-07 10_[+1(1.27e-05)]_62 chr19:39390187-39390267 2.67e-01 80 chr8:145682416-145682496 3.11e-05 55_[+1(2.93e-05)]_17 chr3:113775539-113775619 1.88e-01 80 chr12:123380737-12338081 3.06e-04 20_[+1(4.59e-05)]_52 chr9:94877677-94877757 1.92e-01 80 chr9:6015601-6015681 5.95e-02 65_[+2(8.27e-05)]_7 chr10:3356363-3356443 1.12e-03 8_[+3(9.09e-05)]_20_[+3(9.09e-05)]_\ 21_[+3(9.09e-05)]_7 chr19:8454838-8454918 2.96e-08 21_[+4(1.20e-05)]_51 chr9:97488898-97488978 5.59e-08 51_[+1(1.27e-05)]_21 chr8:145682216-145682296 2.28e-05 42_[+1(2.93e-05)]_5_[+1(2.93e-05)]_\ 6_[+1(2.93e-05)]_3 chr1:714044-714124 3.33e-07 23_[+1(1.27e-05)]_17_[+1(1.27e-05)]_\ 24 chr1:1590494-1590574 8.56e-01 80 chr13:34392180-34392260 7.84e-07 27_[+1(1.27e-05)]_45 chr8:23218247-23218327 4.01e-02 80 chr18:33647520-33647600 5.16e-07 18_[+1(1.27e-05)]_54 chr11:65271181-65271261 9.09e-01 80 chr19:39881337-39881417 2.35e-07 24_[+1(1.27e-05)]_48 chr2:105953798-105953878 1.87e-01 80 chr3:128598286-128598366 8.94e-08 20_[+4(1.20e-05)]_52 chrX:135055914-135055994 7.84e-08 12_[+1(1.27e-05)]_60 chr6:3177116-3177196 5.62e-06 25_[+4(2.95e-05)]_47 chr3:58291924-58292004 4.64e-07 40_[+1(1.27e-05)]_32 chr15:41047438-41047518 3.80e-06 13_[+1(1.27e-05)]_59 chr1:1655798-1655878 7.13e-02 80 chr3:140660532-140660612 1.58e-07 28_[+1(1.27e-05)]_44 chr19:49164480-49164560 8.20e-08 31_[+1(1.27e-05)]_41 chr15:42840986-42841066 9.01e-08 6_[+4(1.20e-05)]_66 chr1:35602546-35602626 8.61e-01 80 chrX:16737604-16737684 7.14e-07 38_[+1(1.27e-05)]_34 chr7:66309948-66310028 7.15e-06 1_[+1(9.34e-05)]_17_[+1(1.27e-05)]_\ 46 chr2:190305769-190305849 1.84e-02 35_[+4(4.89e-05)]_37 chr17:33914232-33914312 2.96e-07 22_[+1(1.27e-05)]_15_[+1(1.27e-05)]_\ 27 chr12:6772508-6772588 1.91e-07 53_[+1(1.27e-05)]_19 chr9:140083014-140083094 2.58e-01 80 chr17:56744248-56744328 4.57e-07 31_[+1(1.27e-05)]_41 chr1:153917166-153917246 1.56e-05 53_[+1(2.93e-05)]_19 chr11:809818-809898 1.07e-06 55_[+1(1.27e-05)]_17 chr6:37400921-37401001 9.01e-08 53_[+4(1.20e-05)]_19 chr1:16490950-16491030 1.61e-01 80 chr4:104119608-104119688 5.58e-02 80 chr9:86323043-86323123 2.87e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************