******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/JUND.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2:8442284-8442364 1.0000 80 chr8:23133646-23133726 1.0000 80 chr13:93942917-93942997 1.0000 80 chr5:56989051-56989131 1.0000 80 chr2:47100899-47100979 1.0000 80 chr2:179107142-179107222 1.0000 80 chr11:47545275-47545355 1.0000 80 chr2:27544095-27544175 1.0000 80 chr9:140330609-140330689 1.0000 80 chr8:126606412-126606492 1.0000 80 chr11:122954458-12295453 1.0000 80 chr15:40559168-40559248 1.0000 80 chr11:12746042-12746122 1.0000 80 chr9:123638850-123638930 1.0000 80 chr6:6807153-6807233 1.0000 80 chr17:62062603-62062683 1.0000 80 chr1:27449293-27449373 1.0000 80 chr17:33760742-33760822 1.0000 80 chr2:8685226-8685306 1.0000 80 chr15:45748920-45749000 1.0000 80 chr1:32166799-32166879 1.0000 80 chr1:234881646-234881726 1.0000 80 chr4:37630750-37630830 1.0000 80 chr3:44277563-44277643 1.0000 80 chr16:79692300-79692380 1.0000 80 chr21:47608429-47608509 1.0000 80 chr19:55718636-55718716 1.0000 80 chr1:205263840-205263920 1.0000 80 chr12:104998041-10499812 1.0000 80 chr5:156891611-156891691 1.0000 80 chr16:3692835-3692915 1.0000 80 chr2:128155958-128156038 1.0000 80 chr17:32269580-32269660 1.0000 80 chr2:65593875-65593955 1.0000 80 chr20:1396786-1396866 1.0000 80 chr3:157230422-157230502 1.0000 80 chr11:93885542-93885622 1.0000 80 chr6:111698953-111699033 1.0000 80 chr3:14307140-14307220 1.0000 80 chr14:23005991-23006071 1.0000 80 chr20:44844673-44844753 1.0000 80 chr1:195869040-195869120 1.0000 80 chr8:101912785-101912865 1.0000 80 chr19:1265519-1265599 1.0000 80 chr2:44314497-44314577 1.0000 80 chr14:68086437-68086517 1.0000 80 chr12:47672025-47672105 1.0000 80 chr6:91189102-91189182 1.0000 80 chr1:12112199-12112279 1.0000 80 chr4:184104623-184104703 1.0000 80 chr7:142661699-142661779 1.0000 80 chr10:134385584-13438566 1.0000 80 chr1:52035580-52035660 1.0000 80 chr3:45085346-45085426 1.0000 80 chr13:101045126-10104520 1.0000 80 chr22:28114311-28114391 1.0000 80 chr17:6902392-6902472 1.0000 80 chr10:93661695-93661775 1.0000 80 chr7:871476-871556 1.0000 80 chr13:31778934-31779014 1.0000 80 chr3:196377918-196377998 1.0000 80 chr16:20096090-20096170 1.0000 80 chr17:75830726-75830806 1.0000 80 chr1:224716778-224716858 1.0000 80 chr1:166699717-166699797 1.0000 80 chr11:19681860-19681940 1.0000 80 chr19:48829342-48829422 1.0000 80 chr9:130538748-130538828 1.0000 80 chr1:53373365-53373445 1.0000 80 chr20:30424138-30424218 1.0000 80 chr3:65016694-65016774 1.0000 80 chr1:179845506-179845586 1.0000 80 chr6:14744346-14744426 1.0000 80 chr16:1052872-1052952 1.0000 80 chr2:12317260-12317340 1.0000 80 chr7:103556565-103556645 1.0000 80 chr18:76916827-76916907 1.0000 80 chr3:185191442-185191522 1.0000 80 chr8:1694457-1694537 1.0000 80 chr16:87179180-87179260 1.0000 80 chr1:8933792-8933872 1.0000 80 chr17:79870760-79870840 1.0000 80 chr19:45601692-45601772 1.0000 80 chr4:82646369-82646449 1.0000 80 chr11:86454567-86454647 1.0000 80 chr7:106717764-106717844 1.0000 80 chr7:44678926-44679006 1.0000 80 chr2:173118066-173118146 1.0000 80 chr14:37242430-37242510 1.0000 80 chr16:3072411-3072491 1.0000 80 chr7:14020830-14020910 1.0000 80 chr6:159053443-159053523 1.0000 80 chr17:4848637-4848717 1.0000 80 chr19:996511-996591 1.0000 80 chr13:97793977-97794057 1.0000 80 chr6:45422191-45422271 1.0000 80 chr19:13962090-13962170 1.0000 80 chr16:70780753-70780833 1.0000 80 chr16:85063163-85063243 1.0000 80 chr15:38881813-38881893 1.0000 80 chr8:123695713-123695793 1.0000 80 chr8:131540723-131540803 1.0000 80 chr1:168439070-168439150 1.0000 80 chr17:64344879-64344959 1.0000 80 chr12:102868383-10286846 1.0000 80 chr2:151024298-151024378 1.0000 80 chr11:9634817-9634897 1.0000 80 chr8:129162379-129162459 1.0000 80 chr2:88899792-88899872 1.0000 80 chr4:109908970-109909050 1.0000 80 chr9:117314390-117314470 1.0000 80 chr3:46977082-46977162 1.0000 80 chr4:77262339-77262419 1.0000 80 chr12:117354728-11735480 1.0000 80 chr11:13229844-13229924 1.0000 80 chr19:17584067-17584147 1.0000 80 chr19:45414612-45414692 1.0000 80 chr1:52216045-52216125 1.0000 80 chr21:40159601-40159681 1.0000 80 chr2:69997536-69997616 1.0000 80 chr16:69123139-69123219 1.0000 80 chr5:159087578-159087658 1.0000 80 chr9:99019216-99019296 1.0000 80 chr17:46583344-46583424 1.0000 80 chr11:44782533-44782613 1.0000 80 chr12:109023696-10902377 1.0000 80 chr10:79165598-79165678 1.0000 80 chr11:35052404-35052484 1.0000 80 chr20:51948186-51948266 1.0000 80 chr19:55670389-55670469 1.0000 80 chr13:52123372-52123452 1.0000 80 chr15:67316861-67316941 1.0000 80 chr10:104212860-10421294 1.0000 80 chr3:8671289-8671369 1.0000 80 chr20:60663679-60663759 1.0000 80 chr6:52382490-52382570 1.0000 80 chr1:205253949-205254029 1.0000 80 chr8:54640411-54640491 1.0000 80 chr2:13105701-13105781 1.0000 80 chr9:124049451-124049531 1.0000 80 chr6:35662368-35662448 1.0000 80 chr7:50237301-50237381 1.0000 80 chr20:50180424-50180504 1.0000 80 chr6:3177128-3177208 1.0000 80 chr11:6628286-6628366 1.0000 80 chr5:174945008-174945088 1.0000 80 chr12:53297768-53297848 1.0000 80 chr1:168368398-168368478 1.0000 80 chr16:31891961-31892041 1.0000 80 chr10:23801482-23801562 1.0000 80 chr2:119560723-119560803 1.0000 80 chr17:80225570-80225650 1.0000 80 chr20:25291073-25291153 1.0000 80 chr18:1513685-1513765 1.0000 80 chr10:3825228-3825308 1.0000 80 chr12:57294553-57294633 1.0000 80 chr15:79471548-79471628 1.0000 80 chr9:125164821-125164901 1.0000 80 chr11:74854346-74854426 1.0000 80 chr17:81031509-81031589 1.0000 80 chr3:183803343-183803423 1.0000 80 chr1:224730666-224730746 1.0000 80 chr10:112261172-11226125 1.0000 80 chr10:111981697-11198177 1.0000 80 chr7:143189201-143189281 1.0000 80 chr16:69564701-69564781 1.0000 80 chr2:238110804-238110884 1.0000 80 chr15:78505097-78505177 1.0000 80 chr21:38882226-38882306 1.0000 80 chr4:87932922-87933002 1.0000 80 chr7:73694101-73694181 1.0000 80 chr18:3603603-3603683 1.0000 80 chr19:14495226-14495306 1.0000 80 chr1:28099510-28099590 1.0000 80 chr16:85393049-85393129 1.0000 80 chr17:37027875-37027955 1.0000 80 chr12:46613779-46613859 1.0000 80 chr22:47330945-47331025 1.0000 80 chr6:3160592-3160672 1.0000 80 chr5:34924194-34924274 1.0000 80 chr3:196065438-196065518 1.0000 80 chr20:25218571-25218651 1.0000 80 chr20:30843217-30843297 1.0000 80 chr1:41575423-41575503 1.0000 80 chr8:126676840-126676920 1.0000 80 chr16:11709676-11709756 1.0000 80 chr1:26602879-26602959 1.0000 80 chr1:27098361-27098441 1.0000 80 chr2:69902700-69902780 1.0000 80 chr2:158755204-158755284 1.0000 80 chr18:32559223-32559303 1.0000 80 chr17:17817412-17817492 1.0000 80 chr2:11376544-11376624 1.0000 80 chr7:99160646-99160726 1.0000 80 chr5:1174598-1174678 1.0000 80 chr1:25895547-25895627 1.0000 80 chr9:71795775-71795855 1.0000 80 chr6:164007033-164007113 1.0000 80 chr20:40325244-40325324 1.0000 80 chr1:114347527-114347607 1.0000 80 chr2:170526799-170526879 1.0000 80 chr10:11726940-11727020 1.0000 80 chr7:2570028-2570108 1.0000 80 chr19:2962179-2962259 1.0000 80 chr9:110470411-110470491 1.0000 80 chr4:14858217-14858297 1.0000 80 chr15:52313474-52313554 1.0000 80 chr3:5236577-5236657 1.0000 80 chr7:139900175-139900255 1.0000 80 chr20:34673815-34673895 1.0000 80 chr12:104802474-10480255 1.0000 80 chr6:126267579-126267659 1.0000 80 chr6:17715460-17715540 1.0000 80 chr14:102438865-10243894 1.0000 80 chr4:122632871-122632951 1.0000 80 chr15:40391066-40391146 1.0000 80 chr11:108368486-10836856 1.0000 80 chr11:45901868-45901948 1.0000 80 chr9:75764546-75764626 1.0000 80 chr1:55645065-55645145 1.0000 80 chr17:15824161-15824241 1.0000 80 chr7:133768848-133768928 1.0000 80 chr4:87863470-87863550 1.0000 80 chr5:68509748-68509828 1.0000 80 chr6:37759273-37759353 1.0000 80 chr17:43201534-43201614 1.0000 80 chr9:132949589-132949669 1.0000 80 chr6:25910631-25910711 1.0000 80 chr6:135613042-135613122 1.0000 80 chr18:20248072-20248152 1.0000 80 chr16:48443995-48444075 1.0000 80 chr5:141742462-141742542 1.0000 80 chr22:40361854-40361934 1.0000 80 chr19:49078115-49078195 1.0000 80 chr2:68793126-68793206 1.0000 80 chr8:66629738-66629818 1.0000 80 chr10:72409452-72409532 1.0000 80 chr2:234259537-234259617 1.0000 80 chr19:47744433-47744513 1.0000 80 chr19:52302742-52302822 1.0000 80 chr19:8488948-8489028 1.0000 80 chr3:33984162-33984242 1.0000 80 chr22:21213168-21213248 1.0000 80 chr17:47049838-47049918 1.0000 80 chr19:46696533-46696613 1.0000 80 chr22:21457213-21457293 1.0000 80 chr1:156884438-156884518 1.0000 80 chr3:196001618-196001698 1.0000 80 chr19:9186435-9186515 1.0000 80 chr22:22020592-22020672 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_JUND/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/JUND.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.239 C 0.264 G 0.264 T 0.234 Background letter frequencies (from file dataset with add-one prior applied): A 0.239 C 0.264 G 0.263 T 0.234 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGASTCAT MEME-1 width = 8 sites = 233 llr = 2237 E-value = 3.7e-486 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a:::a: pos.-specific C :::6:a:3 probability G :a:4:::: matrix T a:::a::7 bits 2.1 * * * * 1.9 *** *** 1.7 *** *** 1.5 *** *** Relative 1.3 *** *** Entropy 1.0 *** *** (13.8 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACTCAT consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:8488948-8489028 52 1.34e-05 TGGGAAACAG TGACTCAT GGCTGTTTGG chr2:234259537-234259617 34 1.34e-05 ATTCATAGTG TGACTCAT TCAATAAAGA chr10:72409452-72409532 32 1.34e-05 gcctccatca tgactcat ccctccatca chr2:68793126-68793206 48 1.34e-05 ttacatccta tgactcAT AGACTAGGTT chr18:20248072-20248152 26 1.34e-05 AGTCATGCAG TGACTCAT AGCATCATCA chr6:135613042-135613122 55 1.34e-05 ggagaatgga tgactcat ctaaaggagg chr6:37759273-37759353 10 1.34e-05 TCTTTGGGA TGACTCAT TACTGAGTTG chr4:87863470-87863550 39 1.34e-05 CAGAATCAGG TGACTCAT CTGTCCAGAT chr7:133768848-133768928 47 1.34e-05 CCTGGAAACA TGACTCAT CCAAGGGTGT chr1:55645065-55645145 40 1.34e-05 tatctgtaga tgactcat acatttctat chr14:102438865-10243894 51 1.34e-05 CACACAGCGG TGACTCAT CTCTTGGAAT chr6:17715460-17715540 38 1.34e-05 GAGTCAGCAG TGACTCAT AAGCACTTCC chr15:52313474-52313554 53 1.34e-05 AGTTGGATGA TGACTCAT GCTGCCCACG chr20:40325244-40325324 46 1.34e-05 CAGGAATCAG TGACTCAT ATCAGTCTCT chr6:164007033-164007113 33 1.34e-05 gacagaggga tgactcat gtcccaggcg chr1:25895547-25895627 45 1.34e-05 CACCTCTGGA TGACTCAT GGAGGCTACA chr18:32559223-32559303 19 1.34e-05 ATTCCTGTGA TGACTCAT GTGTAGCAGT chr1:27098361-27098441 54 1.34e-05 GTGCCTGAGA TGACTCAT CAGCTGGGGA chr20:25218571-25218651 35 1.34e-05 aagtcgtagg tgactcat ccttgtgttg chr5:34924194-34924274 40 1.34e-05 AGTCACACAG TGACTCAT TCAGGAGAAA chr6:3160592-3160672 27 1.34e-05 CTGCCTAAGG TGACTCAT CTGAGGCCGT chr19:14495226-14495306 42 1.34e-05 GCCCAGGAAG TGACTCAT GCCCAGCCGT chr18:3603603-3603683 33 1.34e-05 TCACACCAAG TGACTCAT TCATTGCTGT chr21:38882226-38882306 32 1.34e-05 accctgggca tgactcat cccttcgtct chr15:78505097-78505177 48 1.34e-05 TTCCTGGCTA TGACTCAT CTGCTCCTGG chr10:112261172-11226125 37 1.34e-05 AATGGCAAGA TGACTCAT TCTAGGAATT chr1:224730666-224730746 4 1.34e-05 agg tgactcat gctaggcctc chr3:183803343-183803423 40 1.34e-05 gagattagga tgactcat cccctgaaac chr11:74854346-74854426 42 1.34e-05 GCAGAGGAAG TGACTCAT CTTCCCAGAT chr18:1513685-1513765 31 1.34e-05 TTCCCTTTCA TGACTCAT TCCTTCCAAT chr17:80225570-80225650 47 1.34e-05 GGAGGGAGGG TGACTCAT CCCACTAGTT chr2:119560723-119560803 42 1.34e-05 GTGATAAAGA TGACTCAT ACCCTGGCCC chr10:23801482-23801562 48 1.34e-05 gctcagggtg tgactcat ccctcagtcc chr1:168368398-168368478 43 1.34e-05 AACCAGTGGA TGACTCAT CCAGGCTTTG chr12:53297768-53297848 18 1.34e-05 GGCCGGGGTA TGACTCAT TCTGTGACCC chr5:174945008-174945088 13 1.34e-05 GCATTCAGCA TGACTCAT CCATCCCCCT chr20:50180424-50180504 34 1.34e-05 CCAAGGCTGG TGACTCAT CACATACACA chr2:13105701-13105781 21 1.34e-05 GCAGACTGCA TGACTCAT CTTTCCTAGA chr8:54640411-54640491 58 1.34e-05 aatcttgatg tgactcat tcgccaccag chr20:60663679-60663759 32 1.34e-05 gggcaatgca tgactcat gcttgtagtg chr15:67316861-67316941 29 1.34e-05 GAGGGAAAGA TGACTCAT TCCCAGGCTC chr13:52123372-52123452 30 1.34e-05 ggaggtggga tgactcat tcaggttgtc chr11:35052404-35052484 46 1.34e-05 CCATGAGCTC TGACTCAT CAGGCTTCTA chr17:46583344-46583424 33 1.34e-05 ACAGAATGGA TGACTCAT CCTGCTCCAA chr21:40159601-40159681 42 1.34e-05 AACATCTAAA TGACTCAT GCCTACACCA chr1:52216045-52216125 49 1.34e-05 CATGTTTGAA TGACTCAT CCCTTCCTTC chr11:13229844-13229924 40 1.34e-05 CTACTACCGA TGACTCAT TCCTGGGGCA chr4:109908970-109909050 34 1.34e-05 CAATCATTGA TGACTCAT CTCCATGATC chr16:70780753-70780833 37 1.34e-05 GATGGGGGAA TGACTCAT CCAAAATTAA chr6:159053443-159053523 45 1.34e-05 GTGTGAGTTA TGACTCAT CGGGAATGGG chr2:173118066-173118146 1 1.34e-05 . TGACTCAT GGGGCCTTTA chr7:44678926-44679006 42 1.34e-05 GCCCCATTGG TGACTCAT ACAGGGAGGG chr7:106717764-106717844 36 1.34e-05 aagCTGATGA TGACTCAT AGTGTAGTAA chr18:76916827-76916907 32 1.34e-05 CACATGTGAA TGACTCAT CTCATAGTGC chr7:103556565-103556645 53 1.34e-05 CATCAGCCAA TGACTCAT CTGGGCAGGG chr16:1052872-1052952 42 1.34e-05 CGTTCGGGGG TGACTCAT CCAGGCCACC chr17:75830726-75830806 24 1.34e-05 GGCTGCTGAG TGACTCAT CAGCCTCAGC chr16:20096090-20096170 32 1.34e-05 ACAGAAAGCA TGACTCAT CAATGTACAG chr10:93661695-93661775 23 1.34e-05 ttgaacactg tgactcat gcctgtgact chr17:6902392-6902472 32 1.34e-05 CCCCTCTGGA TGACTCAT CACACTCCAC chr22:28114311-28114391 38 1.34e-05 AAGAGCGGAG TGACTCAT CAAAGCCCCA chr3:45085346-45085426 46 1.34e-05 GACTAAATGA TGACTCAT CCGTCTGGTT chr10:134385584-13438566 49 1.34e-05 TAGGAAAAGG TGACTCAT CCAAGAGCCT chr4:184104623-184104703 42 1.34e-05 ccggaagcag tgactcat gcctgtaatc chr1:12112199-12112279 27 1.34e-05 GGGCTTGAGA TGACTCAT CTGTGGCTAT chr8:101912785-101912865 40 1.34e-05 GCAGTGCAGA TGACTCAT CTGGGTAACT chr3:14307140-14307220 51 1.34e-05 agctgaaggg tgactcat ccagcatagt chr11:93885542-93885622 56 1.34e-05 aatttaaaTA TGACTCAT GTCAGAGCCC chr20:1396786-1396866 54 1.34e-05 tcagtctggg tgactcat gctcacgctt chr16:3692835-3692915 45 1.34e-05 CCCTTTTCAA TGACTCAT TCCAGGTTCC chr5:156891611-156891691 39 1.34e-05 gagtcaagga tgactcat gcttttgact chr1:205263840-205263920 44 1.34e-05 CCACCTAGGA TGACTCAT CCCCCAGCTT chr16:79692300-79692380 35 1.34e-05 TTCACCAGGG TGACTCAT ACCTGGGATC chr4:37630750-37630830 47 1.34e-05 GCCCAGTTGA TGACTCAT ACTCAGCCTG chr17:33760742-33760822 33 1.34e-05 CAGGCCACGA TGACTCAT CACAGGGGAA chr11:12746042-12746122 34 1.34e-05 GGAGTGCTGA TGACTCAT CCTCTGAATG chr9:140330609-140330689 36 1.34e-05 GGACACAGGG TGACTCAT ACAGCGGGCC chr11:47545275-47545355 35 1.34e-05 TGCATGCTTA TGACTCAT GAGGGGATGG chr8:23133646-23133726 39 1.34e-05 CTAGGGAAGA TGACTCAT TCCCCTCTCC chr3:196001618-196001698 55 2.68e-05 TGACACCCCA TGAGTCAT GGCCAACATG chr19:46696533-46696613 29 2.68e-05 gccccgctgg tgagtcat ccttcgtgca chr3:33984162-33984242 47 2.68e-05 AGATAAGAGA TGAGTCAT ATTTGGGGAT chr8:66629738-66629818 37 2.68e-05 ACTTGCAAGG TGAGTCAT TAGTAGATAA chr22:40361854-40361934 19 2.68e-05 CAGTGATGAG TGAGTCAT CCATATCTAC chr5:141742462-141742542 37 2.68e-05 GGCCCAGTGA TGAGTCAT GCTGGAGTGT chr6:25910631-25910711 36 2.68e-05 CTAGGCATTC TGAGTCAT CATTGTTCTT chr5:68509748-68509828 39 2.68e-05 tgcctcagga tgagtcat ggccttgagt chr9:75764546-75764626 49 2.68e-05 GCAAGAGTGG TGAGTCAT TTCTCTGGAG chr11:45901868-45901948 42 2.68e-05 ATCTTTAAAA TGAGTCAT CCTTGTGTCT chr6:126267579-126267659 55 2.68e-05 gccaagtata tgagtcat cattttggag chr4:14858217-14858297 16 2.68e-05 GAAGCCACAG TGAGTCAT AACGCTGTTT chr9:110470411-110470491 24 2.68e-05 agagaccaga tgagtcat ctgtccacaa chr10:11726940-11727020 38 2.68e-05 TTACGAGTCA TGAGTCAT CGCTTCTTCC chr9:71795775-71795855 59 2.68e-05 CTCCCTGGTC TGAGTCAT CTTGGTAACC chr17:17817412-17817492 32 2.68e-05 ACCCAGGTGG TGAGTCAT TCCCTCTGGG chr2:69902700-69902780 36 2.68e-05 cctggaagag tgagtcat aggggcagaa chr1:41575423-41575503 27 2.68e-05 AGCCACAGAG TGAGTCAT ATTTCTTATC chr22:47330945-47331025 30 2.68e-05 GTTTTCAGGG TGAGTCAT CTGTGTGTCA chr16:85393049-85393129 38 2.68e-05 ggcaaatgaa tgagtcat cctgagcctc chr4:87932922-87933002 61 2.68e-05 GAAGGAGCGG TGAGTCAT TTTTTAAAGT chr7:143189201-143189281 37 2.68e-05 atagaaagag tgagtcat catgacctta chr17:81031509-81031589 40 2.68e-05 CTGCCTGGGC TGAGTCAT CCAGGCGCAG chr15:79471548-79471628 63 2.68e-05 CTGTTTACAg tgagtcat cggagcccct chr10:3825228-3825308 38 2.68e-05 TACAACTGCA TGAGTCAT CACTCTGATT chr20:25291073-25291153 27 2.68e-05 AGCCCAGCAG TGAGTCAT CATCAGATGA chr16:31891961-31892041 53 2.68e-05 GGGAGAAGAA TGAGTCAT CAGGGTTTGT chr7:50237301-50237381 28 2.68e-05 GCCTCAGGGA TGAGTCAT GCCGCCAGGC chr6:35662368-35662448 54 2.68e-05 ccagattttc tgagtcat ctgatgactc chr6:52382490-52382570 49 2.68e-05 CACACACACA TGAGTCAT CTCACTGCTG chr10:79165598-79165678 36 2.68e-05 GGTGCACTGG TGAGTCAT CCTCTTGGGG chr11:44782533-44782613 41 2.68e-05 caacagcctg tgagtcat cagctgttgt chr9:99019216-99019296 32 2.68e-05 gtggtaagag tgagtcat ctccggatct chr5:159087578-159087658 39 2.68e-05 taaaaatgta tgagtcat aggcatagag chr16:69123139-69123219 40 2.68e-05 AGTCGAGAGA TGAGTCAT CTGACCTGTG chr19:17584067-17584147 44 2.68e-05 TGTGAGGTTA TGAGTCAT CGATCGAGAT chr12:117354728-11735480 26 2.68e-05 atctgggtta tgagtcat catacagcag chr4:77262339-77262419 21 2.68e-05 GGCAAACTTA TGAGTCAT CAGTCATGAT chr3:46977082-46977162 51 2.68e-05 GCCTTAGGGA TGAGTCAT CCATGCCTCT chr9:117314390-117314470 44 2.68e-05 AGGATGGTGG TGAGTCAT CACGAGAGAC chr2:151024298-151024378 34 2.68e-05 CACCAGGAGA TGAGTCAT ACCAAGCATT chr17:64344879-64344959 51 2.68e-05 ATCTAACAAA TGAGTCAT CCACATGTGG chr8:131540723-131540803 32 2.68e-05 AAGCCACTTC TGAGTCAT CCCTCTGCCT chr8:123695713-123695793 57 2.68e-05 ACCCATGAGG TGAGTCAT CTGTCAACCC chr16:85063163-85063243 48 2.68e-05 AGGGGTGGGA TGAGTCAT GCTGTCTGCT chr6:45422191-45422271 46 2.68e-05 CTCAACAGGA TGAGTCAT CTCTTAGCTG chr7:14020830-14020910 24 2.68e-05 GGAAGATGTA TGAGTCAT TCTTTCTGCC chr3:185191442-185191522 35 2.68e-05 GCTGTAGGTC TGAGTCAT CCCTCGGCAC chr2:12317260-12317340 33 2.68e-05 TCTCCACTGG TGAGTCAT CTCCCGGCCT chr3:65016694-65016774 41 2.68e-05 gataaaacca tgagtcat ctgagtatat chr1:53373365-53373445 46 2.68e-05 TCCCCCTGGG TGAGTCAT CTGTCTTATC chr11:19681860-19681940 47 2.68e-05 TGACTCAGGA TGAGTCAT CACTGTCACT chr1:166699717-166699797 22 2.68e-05 ctgagagggg tgagtcat gcaggcttgt chr1:224716778-224716858 44 2.68e-05 GAAAGCAGGG TGAGTCAT AGGTCAGGTG chr13:31778934-31779014 56 2.68e-05 ggggaaagga tgagtcat acatttctgt chr7:871476-871556 43 2.68e-05 GAGGAAAGTA TGAGTCAT TCCAAATAAA chr1:52035580-52035660 34 2.68e-05 atcaggaggc tgagtcat aaggaggtga chr7:142661699-142661779 24 2.68e-05 TACTCCATGG TGAGTCAT CACCAGCACA chr12:47672025-47672105 41 2.68e-05 GAGTCATCCA TGAGTCAT TCCTTCATAA chr6:111698953-111699033 45 2.68e-05 CTCCTGAAGA TGAGTCAT CATCTTCAGT chr2:65593875-65593955 37 2.68e-05 TTGTACCGGA TGAGTCAT CCGAGGGTTA chr17:32269580-32269660 47 2.68e-05 TAATGAGTGG TGAGTCAT CTCTCAGTGA chr21:47608429-47608509 49 2.68e-05 GTCAGGGTGA TGAGTCAT CTGGGACAGG chr3:44277563-44277643 32 2.68e-05 GGAAAGAGGG TGAGTCAT CGTTGGCGGC chr1:234881646-234881726 50 2.68e-05 TGAAGAGGAG TGAGTCAT CCTGACTCGA chr17:62062603-62062683 31 2.68e-05 ATTGCCTCTA TGAGTCAT TTCCCAGCTG chr2:27544095-27544175 57 2.68e-05 CGTAGCCAGG TGAGTCAT ACAGGCTGAC chr5:56989051-56989131 61 2.68e-05 CAGGCAAGCA TGAGTCAT TCCACATTGC chr13:93942917-93942997 45 2.68e-05 ATAACTTTGA TGAGTCAT TTGTTCCAAC chr2:8442284-8442364 24 2.68e-05 AAACCAGTGA TGAGTCAT CCTGCGCCTC chr19:9186435-9186515 2 4.19e-05 A TGACTCAC TCGGCCCCCC chr1:156884438-156884518 59 4.19e-05 CCGGCCACTA TGACTCAC CCAAGAACAG chr17:47049838-47049918 8 4.19e-05 CCACTGG TGActcac cgccaccccc chr19:52302742-52302822 31 4.19e-05 TGTGTGTGGA TGACTCAC GCACTTCCTG chr17:15824161-15824241 36 4.19e-05 GCCAACGGGA TGACTCAC AGATTGCACA chr11:108368486-10836856 34 4.19e-05 GTCGGCTTGA TGACTCAC CACTGGAAAG chr20:34673815-34673895 30 4.19e-05 CAGCCCCGCA TGACTCAC TCTGTAAGCC chr3:5236577-5236657 50 4.19e-05 AGAGAGGAGA TGACTCAC TGCCTCCTGA chr7:2570028-2570108 24 4.19e-05 CCCCAGAAGG TGACTCAC CCGGCAGGGG chr1:114347527-114347607 34 4.19e-05 ATAAGAAAGA TGACTCAC AAGAGCATAC chr5:1174598-1174678 33 4.19e-05 ATTTGTGGAA TGACTCAC TGTGTAGCGG chr7:99160646-99160726 19 4.19e-05 TTTGAAGGCA TGACTCAC TGTGAGTACA chr2:158755204-158755284 44 4.19e-05 TTCACCCTGA TGACTCAC ACTCTGGCTC chr1:26602879-26602959 51 4.19e-05 ACACTGCCTA TGACTCAC CCATCCCTTC chr8:126676840-126676920 48 4.19e-05 TCTAGCTGCA TGACTCAC CCGGCCAAGA chr20:30843217-30843297 34 4.19e-05 cagctggtga tgactcac gtttctggtg chr16:69564701-69564781 40 4.19e-05 GCGGCGGGGC TGACTCAC CGGATGACTC chr9:125164821-125164901 59 4.19e-05 TTCTAATCTA TGACTCAC ACTCTGCATC chr12:57294553-57294633 42 4.19e-05 actccgtgca tgactcac agtttccctt chr6:3177128-3177208 45 4.19e-05 ATCACACTGG TGACTCAC AGGAAGCTGT chr1:205253949-205254029 39 4.19e-05 ATGGCCACCA TGACTCAC CAGTGAGCCA chr3:8671289-8671369 53 4.19e-05 GGTTCACAGA TGACTCAC CGTGCCCGCC chr10:104212860-10421294 31 4.19e-05 CACCATTTGG TGACTCAC CCTGGTGATG chr19:55670389-55670469 62 4.19e-05 TTTTGGAGTC TGACTCAC AGTTGGGCGG chr2:69997536-69997616 34 4.19e-05 AAATAGTGAA TGACTCAC TCACATGTGA chr19:45414612-45414692 44 4.19e-05 CCCCTGGAGA TGACTCAC cagggctgag chr13:97793977-97794057 25 4.19e-05 GAGCAGAGAA TGACTCAC ATTCTCTGTG chr16:3072411-3072491 63 4.19e-05 GGTGAGGCTC TGACTCAC ACATTCTCAA chr11:86454567-86454647 49 4.19e-05 CACAGGTTGG TGACTCAC TGGCTTGAGA chr19:45601692-45601772 40 4.19e-05 GTCCTGCCGG TGACTCAC TCCCTGCTCC chr1:8933792-8933872 32 4.19e-05 GCTAGGCCTG TGACTCAC AGATGGTGAC chr16:87179180-87179260 10 4.19e-05 CTGCGccga tgactcac tgccatgtaa chr6:14744346-14744426 35 4.19e-05 GCCTCACCAG TGACTCAC TTGGTGACTC chr19:48829342-48829422 50 4.19e-05 AGTCACCAGA TGACTCAC CAGGTCCCCC chr13:101045126-10104520 41 4.19e-05 CCCagggaag tgactcac ccagggaagg chr6:91189102-91189182 36 4.19e-05 AGCTGTGCGG TGACTCAC CCTGCCTGGG chr1:195869040-195869120 47 4.19e-05 acattgaaga tgactcac tcacttggct chr20:44844673-44844753 50 4.19e-05 CCTCAAGTAA TGACTCAC CCGATAGGAA chr1:32166799-32166879 29 4.19e-05 CAGCAATGGG TGACTCAC CCCTTGGCAA chr2:8685226-8685306 44 4.19e-05 CAGCTGGGCG TGACTCAC CCCTGTTCCT chr1:27449293-27449373 42 4.19e-05 AAGCAGAGGA TGACTCAC AGGGGAGAGG chr6:6807153-6807233 40 4.19e-05 aaagcggcga tgactcac ccagcatatc chr11:122954458-12295453 21 4.19e-05 TGCCAGAGGA TGACTCAC ACTGCAAAGT chr16:48443995-48444075 46 5.70e-05 GTCACTTTCA TGAGTCAC CCAGGCTGCT chr9:132949589-132949669 33 5.70e-05 AGGACCCTGA TGAGTCAC TCTGTGCCTC chr17:43201534-43201614 47 5.70e-05 GAAATGGGGG TGAGTCAC CGGGGCCTGC chr12:104802474-10480255 42 5.70e-05 GCTGGAATAG TGAGTCAC CCTCGGGGtt chr2:170526799-170526879 37 5.70e-05 CACTGGGCTA TGAGTCAC ACAAAGACTC chr2:11376544-11376624 33 5.70e-05 ATGGAAAGAA TGAGTCAC TGGTAGCCAT chr3:196065438-196065518 29 5.70e-05 GCTGTCCTGA TGAGTCAC TGGATGCACC chr2:238110804-238110884 1 5.70e-05 . TGAGTCAC CCGGTTTGCT chr9:124049451-124049531 44 5.70e-05 GACTCAGCCC TGAGTCAC CGGGAGGCTG chr2:88899792-88899872 61 5.70e-05 AGCATAGGAA TGAGTCAC CCGATAGTCA chr8:129162379-129162459 37 5.70e-05 CGCCCTCTGA TGAGTCAC CACTGTGGTG chr1:168439070-168439150 42 5.70e-05 GTGGCGAGCA TGAGTCAC TCTGGGCCTC chr15:38881813-38881893 40 5.70e-05 TGCTGCAGGG TGAGTCAC TAACAAATTG chr19:13962090-13962170 34 5.70e-05 GGCCTGGGGG TGAGTCAC CGCCCAGCAA chr4:82646369-82646449 65 5.70e-05 GCTGACTGAG TGAGTCAC ATCTGCCT chr17:79870760-79870840 58 5.70e-05 TCTCCAGGGA TGAGTCAC TAGCAACTCT chr8:1694457-1694537 26 5.70e-05 TTGTGACTGG TGAGTCAC CCAGCCCAGC chr1:179845506-179845586 33 5.70e-05 AGTTCTTAAA TGAGTCAC GCAAGGTTGC chr20:30424138-30424218 45 5.70e-05 TGATGAGGGA TGAGTCAC CACCGTGGGG chr3:196377918-196377998 34 5.70e-05 ATGCAGGGGA TGAGTCAC GGGATTTTGC chr19:1265519-1265599 66 5.70e-05 GGGGAGGGGG TGAGTCAC AGGGAAG chr14:23005991-23006071 40 5.70e-05 GAGTCAGGCG TGAGTCAC CCAAGACTCT chr2:128155958-128156038 32 5.70e-05 CCTCCCACTA TGAGTCAC CACCTCTGAT chr12:104998041-10499812 41 5.70e-05 CGTAGGTGGA TGAGTCAC CATCCTCCCT chr19:55718636-55718716 27 5.70e-05 CCCCGCCCCA TGAGTCAC CCTTGCATGG chr15:40559168-40559248 32 5.70e-05 agagagaggg tgagtcac ccccaggcat chr8:126606412-126606492 50 5.70e-05 GTACTGTGAG TGAGTCAC CTTTCCCAGA chr2:47100899-47100979 37 5.70e-05 TCACAGGCGA TGAGTCAC CCTGCATTGT chr15:40391066-40391146 45 7.21e-05 GCCACGCTGA TGACTCAG AAGCTAAATA chr4:122632871-122632951 53 7.21e-05 GGTCCGCGGG TGACTCAG CGTCCAGGAA chr16:11709676-11709756 33 7.21e-05 tgactcaaga tgactcag tgtgggggta chr17:4848637-4848717 14 7.21e-05 GCATTTGCTA TGACTCAG AAGGGGGAGC chr3:157230422-157230502 41 7.21e-05 TCTCGCCTGA TGACTCAG ACTCAAGGGT chr17:37027875-37027955 40 8.71e-05 CTTTGGCCTC TGAGTCAG CGTGAGGAGG chr7:73694101-73694181 57 8.71e-05 TCCTGGtgca tgagtcag cttgagctgc chr14:37242430-37242510 40 8.71e-05 CTGTGAGTGA TGAGTCAG ACCCGTCAGA chr9:123638850-123638930 45 1.11e-04 GAAGCGAGGA TGATTCAT GCGCCGGGGC chr19:47744433-47744513 59 1.48e-04 TGGGGGGGGT TGACTAAT GGCCGCGCTG chr12:46613779-46613859 40 1.77e-04 GCATCACAGA CGACTCAT AAACTAGCAA chr11:9634817-9634897 39 2.02e-04 GTTTCTGCTC TTAGTCAC TGCCCAGCAG chr20:51948186-51948266 44 3.19e-04 TCCTGCtgca ttagtcag agtcccctaa -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:8488948-8489028 1.3e-05 51_[+1]_21 chr2:234259537-234259617 1.3e-05 33_[+1]_39 chr10:72409452-72409532 1.3e-05 31_[+1]_41 chr2:68793126-68793206 1.3e-05 47_[+1]_25 chr18:20248072-20248152 1.3e-05 25_[+1]_47 chr6:135613042-135613122 1.3e-05 54_[+1]_18 chr6:37759273-37759353 1.3e-05 9_[+1]_63 chr4:87863470-87863550 1.3e-05 38_[+1]_34 chr7:133768848-133768928 1.3e-05 46_[+1]_26 chr1:55645065-55645145 1.3e-05 39_[+1]_33 chr14:102438865-10243894 1.3e-05 50_[+1]_22 chr6:17715460-17715540 1.3e-05 37_[+1]_35 chr15:52313474-52313554 1.3e-05 52_[+1]_20 chr20:40325244-40325324 1.3e-05 45_[+1]_27 chr6:164007033-164007113 1.3e-05 32_[+1]_40 chr1:25895547-25895627 1.3e-05 44_[+1]_28 chr18:32559223-32559303 1.3e-05 18_[+1]_54 chr1:27098361-27098441 1.3e-05 53_[+1]_19 chr20:25218571-25218651 1.3e-05 34_[+1]_38 chr5:34924194-34924274 1.3e-05 39_[+1]_33 chr6:3160592-3160672 1.3e-05 26_[+1]_46 chr19:14495226-14495306 1.3e-05 41_[+1]_31 chr18:3603603-3603683 1.3e-05 32_[+1]_40 chr21:38882226-38882306 1.3e-05 31_[+1]_41 chr15:78505097-78505177 1.3e-05 47_[+1]_25 chr10:112261172-11226125 1.3e-05 36_[+1]_36 chr1:224730666-224730746 1.3e-05 3_[+1]_69 chr3:183803343-183803423 1.3e-05 39_[+1]_33 chr11:74854346-74854426 1.3e-05 41_[+1]_31 chr18:1513685-1513765 1.3e-05 30_[+1]_42 chr17:80225570-80225650 1.3e-05 46_[+1]_26 chr2:119560723-119560803 1.3e-05 41_[+1]_31 chr10:23801482-23801562 1.3e-05 47_[+1]_25 chr1:168368398-168368478 1.3e-05 42_[+1]_30 chr12:53297768-53297848 1.3e-05 17_[+1]_55 chr5:174945008-174945088 1.3e-05 12_[+1]_60 chr20:50180424-50180504 1.3e-05 33_[+1]_39 chr2:13105701-13105781 1.3e-05 20_[+1]_52 chr8:54640411-54640491 1.3e-05 57_[+1]_15 chr20:60663679-60663759 1.3e-05 31_[+1]_41 chr15:67316861-67316941 1.3e-05 28_[+1]_44 chr13:52123372-52123452 1.3e-05 29_[+1]_43 chr11:35052404-35052484 1.3e-05 45_[+1]_27 chr17:46583344-46583424 1.3e-05 32_[+1]_40 chr21:40159601-40159681 1.3e-05 41_[+1]_31 chr1:52216045-52216125 1.3e-05 48_[+1]_24 chr11:13229844-13229924 1.3e-05 39_[+1]_33 chr4:109908970-109909050 1.3e-05 33_[+1]_39 chr16:70780753-70780833 1.3e-05 36_[+1]_36 chr6:159053443-159053523 1.3e-05 44_[+1]_28 chr2:173118066-173118146 1.3e-05 [+1]_72 chr7:44678926-44679006 1.3e-05 41_[+1]_31 chr7:106717764-106717844 1.3e-05 35_[+1]_37 chr18:76916827-76916907 1.3e-05 31_[+1]_41 chr7:103556565-103556645 1.3e-05 52_[+1]_20 chr16:1052872-1052952 1.3e-05 41_[+1]_31 chr17:75830726-75830806 1.3e-05 23_[+1]_49 chr16:20096090-20096170 1.3e-05 31_[+1]_41 chr10:93661695-93661775 1.3e-05 22_[+1]_50 chr17:6902392-6902472 1.3e-05 31_[+1]_41 chr22:28114311-28114391 1.3e-05 37_[+1]_35 chr3:45085346-45085426 1.3e-05 45_[+1]_27 chr10:134385584-13438566 1.3e-05 48_[+1]_24 chr4:184104623-184104703 1.3e-05 41_[+1]_31 chr1:12112199-12112279 1.3e-05 26_[+1]_46 chr8:101912785-101912865 1.3e-05 39_[+1]_33 chr3:14307140-14307220 1.3e-05 50_[+1]_22 chr11:93885542-93885622 1.3e-05 55_[+1]_17 chr20:1396786-1396866 1.3e-05 53_[+1]_19 chr16:3692835-3692915 1.3e-05 44_[+1]_28 chr5:156891611-156891691 1.3e-05 38_[+1]_34 chr1:205263840-205263920 1.3e-05 43_[+1]_29 chr16:79692300-79692380 1.3e-05 34_[+1]_38 chr4:37630750-37630830 1.3e-05 46_[+1]_26 chr17:33760742-33760822 1.3e-05 32_[+1]_40 chr11:12746042-12746122 1.3e-05 33_[+1]_39 chr9:140330609-140330689 1.3e-05 35_[+1]_37 chr11:47545275-47545355 1.3e-05 34_[+1]_38 chr8:23133646-23133726 1.3e-05 38_[+1]_34 chr3:196001618-196001698 2.7e-05 54_[+1]_18 chr19:46696533-46696613 2.7e-05 28_[+1]_44 chr3:33984162-33984242 2.7e-05 46_[+1]_26 chr8:66629738-66629818 2.7e-05 36_[+1]_36 chr22:40361854-40361934 2.7e-05 18_[+1]_54 chr5:141742462-141742542 2.7e-05 36_[+1]_36 chr6:25910631-25910711 2.7e-05 35_[+1]_37 chr5:68509748-68509828 2.7e-05 38_[+1]_34 chr9:75764546-75764626 2.7e-05 48_[+1]_24 chr11:45901868-45901948 2.7e-05 41_[+1]_31 chr6:126267579-126267659 2.7e-05 54_[+1]_18 chr4:14858217-14858297 2.7e-05 15_[+1]_57 chr9:110470411-110470491 2.7e-05 23_[+1]_49 chr10:11726940-11727020 2.7e-05 37_[+1]_35 chr9:71795775-71795855 2.7e-05 58_[+1]_14 chr17:17817412-17817492 2.7e-05 31_[+1]_41 chr2:69902700-69902780 2.7e-05 35_[+1]_37 chr1:41575423-41575503 2.7e-05 26_[+1]_46 chr22:47330945-47331025 2.7e-05 29_[+1]_43 chr16:85393049-85393129 2.7e-05 37_[+1]_35 chr4:87932922-87933002 2.7e-05 60_[+1]_12 chr7:143189201-143189281 2.7e-05 36_[+1]_36 chr17:81031509-81031589 2.7e-05 39_[+1]_33 chr15:79471548-79471628 2.7e-05 62_[+1]_10 chr10:3825228-3825308 2.7e-05 37_[+1]_35 chr20:25291073-25291153 2.7e-05 26_[+1]_46 chr16:31891961-31892041 2.7e-05 52_[+1]_20 chr7:50237301-50237381 2.7e-05 27_[+1]_45 chr6:35662368-35662448 2.7e-05 53_[+1]_19 chr6:52382490-52382570 2.7e-05 48_[+1]_24 chr10:79165598-79165678 2.7e-05 35_[+1]_37 chr11:44782533-44782613 2.7e-05 40_[+1]_32 chr9:99019216-99019296 2.7e-05 31_[+1]_41 chr5:159087578-159087658 2.7e-05 38_[+1]_34 chr16:69123139-69123219 2.7e-05 39_[+1]_33 chr19:17584067-17584147 2.7e-05 43_[+1]_29 chr12:117354728-11735480 2.7e-05 25_[+1]_47 chr4:77262339-77262419 2.7e-05 20_[+1]_52 chr3:46977082-46977162 2.7e-05 50_[+1]_22 chr9:117314390-117314470 2.7e-05 43_[+1]_29 chr2:151024298-151024378 2.7e-05 33_[+1]_39 chr17:64344879-64344959 2.7e-05 50_[+1]_22 chr8:131540723-131540803 2.7e-05 31_[+1]_41 chr8:123695713-123695793 2.7e-05 56_[+1]_16 chr16:85063163-85063243 2.7e-05 47_[+1]_25 chr6:45422191-45422271 2.7e-05 45_[+1]_27 chr7:14020830-14020910 2.7e-05 23_[+1]_49 chr3:185191442-185191522 2.7e-05 34_[+1]_38 chr2:12317260-12317340 2.7e-05 32_[+1]_40 chr3:65016694-65016774 2.7e-05 40_[+1]_32 chr1:53373365-53373445 2.7e-05 45_[+1]_27 chr11:19681860-19681940 2.7e-05 46_[+1]_26 chr1:166699717-166699797 2.7e-05 21_[+1]_51 chr1:224716778-224716858 2.7e-05 43_[+1]_29 chr13:31778934-31779014 2.7e-05 55_[+1]_17 chr7:871476-871556 2.7e-05 42_[+1]_30 chr1:52035580-52035660 2.7e-05 33_[+1]_39 chr7:142661699-142661779 2.7e-05 23_[+1]_49 chr12:47672025-47672105 2.7e-05 40_[+1]_32 chr6:111698953-111699033 2.7e-05 44_[+1]_28 chr2:65593875-65593955 2.7e-05 36_[+1]_36 chr17:32269580-32269660 2.7e-05 46_[+1]_26 chr21:47608429-47608509 2.7e-05 48_[+1]_24 chr3:44277563-44277643 2.7e-05 31_[+1]_41 chr1:234881646-234881726 2.7e-05 49_[+1]_23 chr17:62062603-62062683 2.7e-05 30_[+1]_42 chr2:27544095-27544175 2.7e-05 56_[+1]_16 chr5:56989051-56989131 2.7e-05 60_[+1]_12 chr13:93942917-93942997 2.7e-05 44_[+1]_28 chr2:8442284-8442364 2.7e-05 23_[+1]_49 chr19:9186435-9186515 4.2e-05 1_[+1]_71 chr1:156884438-156884518 4.2e-05 58_[+1]_14 chr17:47049838-47049918 4.2e-05 7_[+1]_65 chr19:52302742-52302822 4.2e-05 30_[+1]_42 chr17:15824161-15824241 4.2e-05 35_[+1]_37 chr11:108368486-10836856 4.2e-05 33_[+1]_39 chr20:34673815-34673895 4.2e-05 29_[+1]_43 chr3:5236577-5236657 4.2e-05 49_[+1]_23 chr7:2570028-2570108 4.2e-05 23_[+1]_49 chr1:114347527-114347607 4.2e-05 33_[+1]_39 chr5:1174598-1174678 4.2e-05 32_[+1]_40 chr7:99160646-99160726 4.2e-05 18_[+1]_54 chr2:158755204-158755284 4.2e-05 43_[+1]_29 chr1:26602879-26602959 4.2e-05 50_[+1]_22 chr8:126676840-126676920 4.2e-05 47_[+1]_25 chr20:30843217-30843297 4.2e-05 33_[+1]_39 chr16:69564701-69564781 4.2e-05 39_[+1]_33 chr9:125164821-125164901 4.2e-05 58_[+1]_14 chr12:57294553-57294633 4.2e-05 41_[+1]_31 chr6:3177128-3177208 4.2e-05 44_[+1]_28 chr1:205253949-205254029 4.2e-05 38_[+1]_34 chr3:8671289-8671369 4.2e-05 52_[+1]_20 chr10:104212860-10421294 4.2e-05 30_[+1]_42 chr19:55670389-55670469 4.2e-05 61_[+1]_11 chr2:69997536-69997616 4.2e-05 33_[+1]_39 chr19:45414612-45414692 4.2e-05 43_[+1]_29 chr13:97793977-97794057 4.2e-05 24_[+1]_48 chr16:3072411-3072491 4.2e-05 62_[+1]_10 chr11:86454567-86454647 4.2e-05 48_[+1]_24 chr19:45601692-45601772 4.2e-05 39_[+1]_33 chr1:8933792-8933872 4.2e-05 31_[+1]_41 chr16:87179180-87179260 4.2e-05 9_[+1]_63 chr6:14744346-14744426 4.2e-05 34_[+1]_38 chr19:48829342-48829422 4.2e-05 49_[+1]_23 chr13:101045126-10104520 4.2e-05 40_[+1]_32 chr6:91189102-91189182 4.2e-05 35_[+1]_37 chr1:195869040-195869120 4.2e-05 46_[+1]_26 chr20:44844673-44844753 4.2e-05 49_[+1]_23 chr1:32166799-32166879 4.2e-05 28_[+1]_44 chr2:8685226-8685306 4.2e-05 43_[+1]_29 chr1:27449293-27449373 4.2e-05 41_[+1]_31 chr6:6807153-6807233 4.2e-05 39_[+1]_33 chr11:122954458-12295453 4.2e-05 20_[+1]_52 chr16:48443995-48444075 5.7e-05 45_[+1]_27 chr9:132949589-132949669 5.7e-05 32_[+1]_40 chr17:43201534-43201614 5.7e-05 46_[+1]_26 chr12:104802474-10480255 5.7e-05 41_[+1]_31 chr2:170526799-170526879 5.7e-05 36_[+1]_36 chr2:11376544-11376624 5.7e-05 32_[+1]_40 chr3:196065438-196065518 5.7e-05 28_[+1]_44 chr2:238110804-238110884 5.7e-05 [+1]_72 chr9:124049451-124049531 5.7e-05 43_[+1]_29 chr2:88899792-88899872 5.7e-05 60_[+1]_12 chr8:129162379-129162459 5.7e-05 36_[+1]_36 chr1:168439070-168439150 5.7e-05 41_[+1]_31 chr15:38881813-38881893 5.7e-05 39_[+1]_33 chr19:13962090-13962170 5.7e-05 33_[+1]_39 chr4:82646369-82646449 5.7e-05 64_[+1]_8 chr17:79870760-79870840 5.7e-05 57_[+1]_15 chr8:1694457-1694537 5.7e-05 25_[+1]_47 chr1:179845506-179845586 5.7e-05 32_[+1]_40 chr20:30424138-30424218 5.7e-05 44_[+1]_28 chr3:196377918-196377998 5.7e-05 33_[+1]_39 chr19:1265519-1265599 5.7e-05 65_[+1]_7 chr14:23005991-23006071 5.7e-05 39_[+1]_33 chr2:128155958-128156038 5.7e-05 31_[+1]_41 chr12:104998041-10499812 5.7e-05 40_[+1]_32 chr19:55718636-55718716 5.7e-05 26_[+1]_46 chr15:40559168-40559248 5.7e-05 31_[+1]_41 chr8:126606412-126606492 5.7e-05 49_[+1]_23 chr2:47100899-47100979 5.7e-05 36_[+1]_36 chr15:40391066-40391146 7.2e-05 44_[+1]_28 chr4:122632871-122632951 7.2e-05 52_[+1]_20 chr16:11709676-11709756 7.2e-05 32_[+1]_40 chr17:4848637-4848717 7.2e-05 13_[+1]_59 chr3:157230422-157230502 7.2e-05 40_[+1]_32 chr17:37027875-37027955 8.7e-05 39_[+1]_33 chr7:73694101-73694181 8.7e-05 56_[+1]_16 chr14:37242430-37242510 8.7e-05 39_[+1]_33 chr9:123638850-123638930 0.00011 44_[+1]_28 chr19:47744433-47744513 0.00015 58_[+1]_14 chr12:46613779-46613859 0.00018 39_[+1]_33 chr11:9634817-9634897 0.0002 38_[+1]_34 chr20:51948186-51948266 0.00032 43_[+1]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGASTCAT width=8 seqs=233 chr19:8488948-8489028 ( 52) TGACTCAT 1 chr2:234259537-234259617 ( 34) TGACTCAT 1 chr10:72409452-72409532 ( 32) TGACTCAT 1 chr2:68793126-68793206 ( 48) TGACTCAT 1 chr18:20248072-20248152 ( 26) TGACTCAT 1 chr6:135613042-135613122 ( 55) TGACTCAT 1 chr6:37759273-37759353 ( 10) TGACTCAT 1 chr4:87863470-87863550 ( 39) TGACTCAT 1 chr7:133768848-133768928 ( 47) TGACTCAT 1 chr1:55645065-55645145 ( 40) TGACTCAT 1 chr14:102438865-10243894 ( 51) TGACTCAT 1 chr6:17715460-17715540 ( 38) TGACTCAT 1 chr15:52313474-52313554 ( 53) TGACTCAT 1 chr20:40325244-40325324 ( 46) TGACTCAT 1 chr6:164007033-164007113 ( 33) TGACTCAT 1 chr1:25895547-25895627 ( 45) TGACTCAT 1 chr18:32559223-32559303 ( 19) TGACTCAT 1 chr1:27098361-27098441 ( 54) TGACTCAT 1 chr20:25218571-25218651 ( 35) TGACTCAT 1 chr5:34924194-34924274 ( 40) TGACTCAT 1 chr6:3160592-3160672 ( 27) TGACTCAT 1 chr19:14495226-14495306 ( 42) TGACTCAT 1 chr18:3603603-3603683 ( 33) TGACTCAT 1 chr21:38882226-38882306 ( 32) TGACTCAT 1 chr15:78505097-78505177 ( 48) TGACTCAT 1 chr10:112261172-11226125 ( 37) TGACTCAT 1 chr1:224730666-224730746 ( 4) TGACTCAT 1 chr3:183803343-183803423 ( 40) TGACTCAT 1 chr11:74854346-74854426 ( 42) TGACTCAT 1 chr18:1513685-1513765 ( 31) TGACTCAT 1 chr17:80225570-80225650 ( 47) TGACTCAT 1 chr2:119560723-119560803 ( 42) TGACTCAT 1 chr10:23801482-23801562 ( 48) TGACTCAT 1 chr1:168368398-168368478 ( 43) TGACTCAT 1 chr12:53297768-53297848 ( 18) TGACTCAT 1 chr5:174945008-174945088 ( 13) TGACTCAT 1 chr20:50180424-50180504 ( 34) TGACTCAT 1 chr2:13105701-13105781 ( 21) TGACTCAT 1 chr8:54640411-54640491 ( 58) TGACTCAT 1 chr20:60663679-60663759 ( 32) TGACTCAT 1 chr15:67316861-67316941 ( 29) TGACTCAT 1 chr13:52123372-52123452 ( 30) TGACTCAT 1 chr11:35052404-35052484 ( 46) TGACTCAT 1 chr17:46583344-46583424 ( 33) TGACTCAT 1 chr21:40159601-40159681 ( 42) TGACTCAT 1 chr1:52216045-52216125 ( 49) TGACTCAT 1 chr11:13229844-13229924 ( 40) TGACTCAT 1 chr4:109908970-109909050 ( 34) TGACTCAT 1 chr16:70780753-70780833 ( 37) TGACTCAT 1 chr6:159053443-159053523 ( 45) TGACTCAT 1 chr2:173118066-173118146 ( 1) TGACTCAT 1 chr7:44678926-44679006 ( 42) TGACTCAT 1 chr7:106717764-106717844 ( 36) TGACTCAT 1 chr18:76916827-76916907 ( 32) TGACTCAT 1 chr7:103556565-103556645 ( 53) TGACTCAT 1 chr16:1052872-1052952 ( 42) TGACTCAT 1 chr17:75830726-75830806 ( 24) TGACTCAT 1 chr16:20096090-20096170 ( 32) TGACTCAT 1 chr10:93661695-93661775 ( 23) TGACTCAT 1 chr17:6902392-6902472 ( 32) TGACTCAT 1 chr22:28114311-28114391 ( 38) TGACTCAT 1 chr3:45085346-45085426 ( 46) TGACTCAT 1 chr10:134385584-13438566 ( 49) TGACTCAT 1 chr4:184104623-184104703 ( 42) TGACTCAT 1 chr1:12112199-12112279 ( 27) TGACTCAT 1 chr8:101912785-101912865 ( 40) TGACTCAT 1 chr3:14307140-14307220 ( 51) TGACTCAT 1 chr11:93885542-93885622 ( 56) TGACTCAT 1 chr20:1396786-1396866 ( 54) TGACTCAT 1 chr16:3692835-3692915 ( 45) TGACTCAT 1 chr5:156891611-156891691 ( 39) TGACTCAT 1 chr1:205263840-205263920 ( 44) TGACTCAT 1 chr16:79692300-79692380 ( 35) TGACTCAT 1 chr4:37630750-37630830 ( 47) TGACTCAT 1 chr17:33760742-33760822 ( 33) TGACTCAT 1 chr11:12746042-12746122 ( 34) TGACTCAT 1 chr9:140330609-140330689 ( 36) TGACTCAT 1 chr11:47545275-47545355 ( 35) TGACTCAT 1 chr8:23133646-23133726 ( 39) TGACTCAT 1 chr3:196001618-196001698 ( 55) TGAGTCAT 1 chr19:46696533-46696613 ( 29) TGAGTCAT 1 chr3:33984162-33984242 ( 47) TGAGTCAT 1 chr8:66629738-66629818 ( 37) TGAGTCAT 1 chr22:40361854-40361934 ( 19) TGAGTCAT 1 chr5:141742462-141742542 ( 37) TGAGTCAT 1 chr6:25910631-25910711 ( 36) TGAGTCAT 1 chr5:68509748-68509828 ( 39) TGAGTCAT 1 chr9:75764546-75764626 ( 49) TGAGTCAT 1 chr11:45901868-45901948 ( 42) TGAGTCAT 1 chr6:126267579-126267659 ( 55) TGAGTCAT 1 chr4:14858217-14858297 ( 16) TGAGTCAT 1 chr9:110470411-110470491 ( 24) TGAGTCAT 1 chr10:11726940-11727020 ( 38) TGAGTCAT 1 chr9:71795775-71795855 ( 59) TGAGTCAT 1 chr17:17817412-17817492 ( 32) TGAGTCAT 1 chr2:69902700-69902780 ( 36) TGAGTCAT 1 chr1:41575423-41575503 ( 27) TGAGTCAT 1 chr22:47330945-47331025 ( 30) TGAGTCAT 1 chr16:85393049-85393129 ( 38) TGAGTCAT 1 chr4:87932922-87933002 ( 61) TGAGTCAT 1 chr7:143189201-143189281 ( 37) TGAGTCAT 1 chr17:81031509-81031589 ( 40) TGAGTCAT 1 chr15:79471548-79471628 ( 63) TGAGTCAT 1 chr10:3825228-3825308 ( 38) TGAGTCAT 1 chr20:25291073-25291153 ( 27) TGAGTCAT 1 chr16:31891961-31892041 ( 53) TGAGTCAT 1 chr7:50237301-50237381 ( 28) TGAGTCAT 1 chr6:35662368-35662448 ( 54) TGAGTCAT 1 chr6:52382490-52382570 ( 49) TGAGTCAT 1 chr10:79165598-79165678 ( 36) TGAGTCAT 1 chr11:44782533-44782613 ( 41) TGAGTCAT 1 chr9:99019216-99019296 ( 32) TGAGTCAT 1 chr5:159087578-159087658 ( 39) TGAGTCAT 1 chr16:69123139-69123219 ( 40) TGAGTCAT 1 chr19:17584067-17584147 ( 44) TGAGTCAT 1 chr12:117354728-11735480 ( 26) TGAGTCAT 1 chr4:77262339-77262419 ( 21) TGAGTCAT 1 chr3:46977082-46977162 ( 51) TGAGTCAT 1 chr9:117314390-117314470 ( 44) TGAGTCAT 1 chr2:151024298-151024378 ( 34) TGAGTCAT 1 chr17:64344879-64344959 ( 51) TGAGTCAT 1 chr8:131540723-131540803 ( 32) TGAGTCAT 1 chr8:123695713-123695793 ( 57) TGAGTCAT 1 chr16:85063163-85063243 ( 48) TGAGTCAT 1 chr6:45422191-45422271 ( 46) TGAGTCAT 1 chr7:14020830-14020910 ( 24) TGAGTCAT 1 chr3:185191442-185191522 ( 35) TGAGTCAT 1 chr2:12317260-12317340 ( 33) TGAGTCAT 1 chr3:65016694-65016774 ( 41) TGAGTCAT 1 chr1:53373365-53373445 ( 46) TGAGTCAT 1 chr11:19681860-19681940 ( 47) TGAGTCAT 1 chr1:166699717-166699797 ( 22) TGAGTCAT 1 chr1:224716778-224716858 ( 44) TGAGTCAT 1 chr13:31778934-31779014 ( 56) TGAGTCAT 1 chr7:871476-871556 ( 43) TGAGTCAT 1 chr1:52035580-52035660 ( 34) TGAGTCAT 1 chr7:142661699-142661779 ( 24) TGAGTCAT 1 chr12:47672025-47672105 ( 41) TGAGTCAT 1 chr6:111698953-111699033 ( 45) TGAGTCAT 1 chr2:65593875-65593955 ( 37) TGAGTCAT 1 chr17:32269580-32269660 ( 47) TGAGTCAT 1 chr21:47608429-47608509 ( 49) TGAGTCAT 1 chr3:44277563-44277643 ( 32) TGAGTCAT 1 chr1:234881646-234881726 ( 50) TGAGTCAT 1 chr17:62062603-62062683 ( 31) TGAGTCAT 1 chr2:27544095-27544175 ( 57) TGAGTCAT 1 chr5:56989051-56989131 ( 61) TGAGTCAT 1 chr13:93942917-93942997 ( 45) TGAGTCAT 1 chr2:8442284-8442364 ( 24) TGAGTCAT 1 chr19:9186435-9186515 ( 2) TGACTCAC 1 chr1:156884438-156884518 ( 59) TGACTCAC 1 chr17:47049838-47049918 ( 8) TGACTCAC 1 chr19:52302742-52302822 ( 31) TGACTCAC 1 chr17:15824161-15824241 ( 36) TGACTCAC 1 chr11:108368486-10836856 ( 34) TGACTCAC 1 chr20:34673815-34673895 ( 30) TGACTCAC 1 chr3:5236577-5236657 ( 50) TGACTCAC 1 chr7:2570028-2570108 ( 24) TGACTCAC 1 chr1:114347527-114347607 ( 34) TGACTCAC 1 chr5:1174598-1174678 ( 33) TGACTCAC 1 chr7:99160646-99160726 ( 19) TGACTCAC 1 chr2:158755204-158755284 ( 44) TGACTCAC 1 chr1:26602879-26602959 ( 51) TGACTCAC 1 chr8:126676840-126676920 ( 48) TGACTCAC 1 chr20:30843217-30843297 ( 34) TGACTCAC 1 chr16:69564701-69564781 ( 40) TGACTCAC 1 chr9:125164821-125164901 ( 59) TGACTCAC 1 chr12:57294553-57294633 ( 42) TGACTCAC 1 chr6:3177128-3177208 ( 45) TGACTCAC 1 chr1:205253949-205254029 ( 39) TGACTCAC 1 chr3:8671289-8671369 ( 53) TGACTCAC 1 chr10:104212860-10421294 ( 31) TGACTCAC 1 chr19:55670389-55670469 ( 62) TGACTCAC 1 chr2:69997536-69997616 ( 34) TGACTCAC 1 chr19:45414612-45414692 ( 44) TGACTCAC 1 chr13:97793977-97794057 ( 25) TGACTCAC 1 chr16:3072411-3072491 ( 63) TGACTCAC 1 chr11:86454567-86454647 ( 49) TGACTCAC 1 chr19:45601692-45601772 ( 40) TGACTCAC 1 chr1:8933792-8933872 ( 32) TGACTCAC 1 chr16:87179180-87179260 ( 10) TGACTCAC 1 chr6:14744346-14744426 ( 35) TGACTCAC 1 chr19:48829342-48829422 ( 50) TGACTCAC 1 chr13:101045126-10104520 ( 41) TGACTCAC 1 chr6:91189102-91189182 ( 36) TGACTCAC 1 chr1:195869040-195869120 ( 47) TGACTCAC 1 chr20:44844673-44844753 ( 50) TGACTCAC 1 chr1:32166799-32166879 ( 29) TGACTCAC 1 chr2:8685226-8685306 ( 44) TGACTCAC 1 chr1:27449293-27449373 ( 42) TGACTCAC 1 chr6:6807153-6807233 ( 40) TGACTCAC 1 chr11:122954458-12295453 ( 21) TGACTCAC 1 chr16:48443995-48444075 ( 46) TGAGTCAC 1 chr9:132949589-132949669 ( 33) TGAGTCAC 1 chr17:43201534-43201614 ( 47) TGAGTCAC 1 chr12:104802474-10480255 ( 42) TGAGTCAC 1 chr2:170526799-170526879 ( 37) TGAGTCAC 1 chr2:11376544-11376624 ( 33) TGAGTCAC 1 chr3:196065438-196065518 ( 29) TGAGTCAC 1 chr2:238110804-238110884 ( 1) TGAGTCAC 1 chr9:124049451-124049531 ( 44) TGAGTCAC 1 chr2:88899792-88899872 ( 61) TGAGTCAC 1 chr8:129162379-129162459 ( 37) TGAGTCAC 1 chr1:168439070-168439150 ( 42) TGAGTCAC 1 chr15:38881813-38881893 ( 40) TGAGTCAC 1 chr19:13962090-13962170 ( 34) TGAGTCAC 1 chr4:82646369-82646449 ( 65) TGAGTCAC 1 chr17:79870760-79870840 ( 58) TGAGTCAC 1 chr8:1694457-1694537 ( 26) TGAGTCAC 1 chr1:179845506-179845586 ( 33) TGAGTCAC 1 chr20:30424138-30424218 ( 45) TGAGTCAC 1 chr3:196377918-196377998 ( 34) TGAGTCAC 1 chr19:1265519-1265599 ( 66) TGAGTCAC 1 chr14:23005991-23006071 ( 40) TGAGTCAC 1 chr2:128155958-128156038 ( 32) TGAGTCAC 1 chr12:104998041-10499812 ( 41) TGAGTCAC 1 chr19:55718636-55718716 ( 27) TGAGTCAC 1 chr15:40559168-40559248 ( 32) TGAGTCAC 1 chr8:126606412-126606492 ( 50) TGAGTCAC 1 chr2:47100899-47100979 ( 37) TGAGTCAC 1 chr15:40391066-40391146 ( 45) TGACTCAG 1 chr4:122632871-122632951 ( 53) TGACTCAG 1 chr16:11709676-11709756 ( 33) TGACTCAG 1 chr17:4848637-4848717 ( 14) TGACTCAG 1 chr3:157230422-157230502 ( 41) TGACTCAG 1 chr17:37027875-37027955 ( 40) TGAGTCAG 1 chr7:73694101-73694181 ( 57) TGAGTCAG 1 chr14:37242430-37242510 ( 40) TGAGTCAG 1 chr9:123638850-123638930 ( 45) TGATTCAT 1 chr19:47744433-47744513 ( 59) TGACTAAT 1 chr12:46613779-46613859 ( 40) CGACTCAT 1 chr11:9634817-9634897 ( 39) TTAGTCAC 1 chr20:51948186-51948266 ( 44) TTAGTCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.92461 E= 3.7e-486 -1451 -594 -1451 209 -1451 -1451 191 -477 206 -1451 -1451 -1451 -1451 107 75 -576 -1451 -1451 -1451 210 -580 192 -1451 -1451 206 -1451 -1451 -1451 -1451 23 -277 148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 233 E= 3.7e-486 0.000000 0.004292 0.000000 0.995708 0.000000 0.000000 0.991416 0.008584 1.000000 0.000000 0.000000 0.000000 0.000000 0.553648 0.442060 0.004292 0.000000 0.000000 0.000000 1.000000 0.004292 0.995708 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.309013 0.038627 0.652361 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-1 regular expression -------------------------------------------------------------------------------- TGA[CG]TCA[TC] -------------------------------------------------------------------------------- Time 4.58 secs. ******************************************************************************** ******************************************************************************** MOTIF RTGASTCA MEME-2 width = 8 sites = 62 llr = 517 E-value = 1.3e-031 ******************************************************************************** -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 4::a:::a pos.-specific C 2:1:4:9: probability G 4:8:5:1: matrix T :a1::a:: bits 2.1 * * * * 1.9 * * * * 1.7 * * * * 1.5 * * *** Relative 1.3 * * *** Entropy 1.0 *** *** (12.0 bits) 0.8 ******* 0.6 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATGAGTCA consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr18:20248072-20248152 13 1.37e-05 TCAGTGAGCT ATGAGTCA TGCAGTGACT chr6:17715460-17715540 26 1.37e-05 TGCCCCTTCA ATGAGTCA GCAGTGACTC chr5:34924194-34924274 27 1.37e-05 CGGTTAGATG ATGAGTCA CACAGTGACT chr2:238110804-238110884 62 1.37e-05 TGCCCCTGGG ATGAGTCA CACTGAGCCT chr13:97793977-97794057 45 1.37e-05 TCTCTGTGAC ATGAGTCA CTCCCATGCA chr19:48829342-48829422 37 1.37e-05 GGGGGTGGGG ATGAGTCA CCAGATGACT chr12:47672025-47672105 29 1.37e-05 GCTACAGACC ATGAGTCA TCCATGAGTC chr14:23005991-23006071 28 1.37e-05 AGAAACAGGA ATGAGTCA GGCGTGAGTC chr2:27544095-27544175 32 1.37e-05 ACTGTCCAGC ATGAGTCA CCACACACGT chr4:87863470-87863550 62 4.24e-05 CAGATAAGCA GTGAGTCA CAGATAAGCA chr4:14858217-14858297 62 4.24e-05 GTGATGGGGT GTGAGTCA CAACGGAGAG chr7:99160646-99160726 42 4.24e-05 GTACATTTCA GTGAGTCA CCCAGAATGG chr16:11709676-11709756 22 4.24e-05 tgctaatggg atgactca agatgactca chr19:14495226-14495306 11 4.24e-05 CAAATGAGTG GTGAGTCA TTCCTTCCCT chr16:69564701-69564781 51 4.24e-05 GACTCACCGG ATGACTCA CTTCCTTGCC chr9:125164821-125164901 17 4.24e-05 TCCTCTCCCC ATGACTCA CTTTTTCCAC chr15:79471548-79471628 24 4.24e-05 GCCTGGGAGG ATGACTCA CAGCAGCGGG chr6:35662368-35662448 65 4.24e-05 gagtcatctg atgactca gagctgga chr8:54640411-54640491 1 4.24e-05 . gtgagtca atggaacaca chr17:4848637-4848717 45 4.24e-05 ACCCACAAGG ATGACTCA ACTAGCCCTG chr16:3072411-3072491 27 4.24e-05 GAGGGAGGGA GTGAGTCA GCCAGCCGCG chr2:173118066-173118146 72 4.24e-05 acagacacac GTGAGTCA C chr16:1052872-1052952 24 4.24e-05 AGCAGCTGAG ATGACTCA CGTTCGGGGG chr1:52035580-52035660 48 4.24e-05 tcataaggag gtgagtca cctgcctagg chr15:40559168-40559248 58 4.24e-05 atgatggaga gtgagtca gagAAGGAAG chr5:56989051-56989131 35 4.24e-05 AGTTCAGCTG ATGACTCA CCAGGGGCCA chr9:124049451-124049531 32 5.75e-05 GGGCCTCTGG GTGACTCA GCCCTGAGTC chr1:8933792-8933872 45 5.75e-05 CTCACAGATG GTGACTCA GCTCCGACTG chr6:14744346-14744426 46 5.75e-05 GACTCACTTG GTGACTCA GTGCTTGTCA chr11:19681860-19681940 36 5.75e-05 CTTTTCTCGT GTGACTCA GGATGAGTCA chr10:93661695-93661775 35 5.75e-05 actcatgcct gtgactca tgcctgaagg chr13:101045126-10104520 63 5.75e-05 ggaaggtcaa gtgactca cccaaggtta chr19:1265519-1265599 41 5.75e-05 TTCCTGAGCT GTGACTCA GGCCTGTGGG chr11:93885542-93885622 15 5.75e-05 cttatcagct gtgactca ccctgctgag chr1:224730666-224730746 64 7.25e-05 tgtgggtagg ctgagtca gaaagacca chr6:52382490-52382570 33 7.25e-05 TGCATTCGCT CTGAGTCA CACACACATG chr13:52123372-52123452 53 7.25e-05 ttgtctggaa ctgagtca agaggactgg chr8:131540723-131540803 67 7.25e-05 GAAGCCACTT CTGAGTCA TTCCTT chr11:86454567-86454647 33 7.25e-05 GCTGTGAAAA CTGAGTCA CAGGTTGGTG chr4:87932922-87933002 13 8.77e-05 GTTGAGCTTC CTGACTCA CAGTCTAGAG chr20:60663679-60663759 71 8.77e-05 aacaaaccta ctgactca tg chr3:8671289-8671369 30 8.77e-05 cacaccctca ctgactcA CCAGTGGTTC chr17:43201534-43201614 20 1.13e-04 TGTGGGGGAG ATGAGTGA CTAAGGCCGG chr11:35052404-35052484 10 1.13e-04 TGTCATCTT ATGAGTGA GGGCTTCTGA chr10:72409452-72409532 46 1.27e-04 tcatccctcc atcagtca gcagttgcaa chr16:48443995-48444075 32 1.27e-04 GAGAGGGCTT ATCAGTCA CTTTCATGAG chr6:126267579-126267659 32 1.27e-04 tatctttggt atcagtca ggaaggccaa chr19:47744433-47744513 12 1.81e-04 GGAGTTGAGG ATTACTCA GCCTCCAGAA chr20:25218571-25218651 1 1.81e-04 . attactca tccatgtggg chr9:117314390-117314470 22 1.81e-04 CCTGAAGGCC ATTACTCA GGGGAGGATG chr14:37242430-37242510 32 1.81e-04 CTTCTCAGCT GTGAGTGA TGAGTCAGAC chr2:47100899-47100979 22 1.81e-04 CCGCAGGCCT GTTAGTCA CAGGCGATGA chr12:104802474-10480255 22 2.23e-04 CCATTTGGCA GTCAGTCA AGGCTGGAAT chr12:57294553-57294633 22 2.23e-04 tcactcacac atcactca ccactccgtg chr19:13962090-13962170 58 2.23e-04 GCAATGAGGC TTGAGTCA CACAGGGCGG chr3:14307140-14307220 25 2.23e-04 taacgtgatg ttgagtca aaacgataag chr9:75764546-75764626 15 2.36e-04 AGTGGAGCCG ATGAATCA TCATCTTCTA chr10:104212860-10421294 60 2.64e-04 CATGCTATTC GTGACTGA GCCACTGCTC chr2:179107142-179107222 26 3.07e-04 TCCTTTCCCA GTGAATCA GCAGATGTGG chr19:45414612-45414692 57 3.35e-04 CTCACcaggg ctgagtga ggaggggaag chr8:66629738-66629818 20 3.79e-04 TGGGCTTCTG CTTACTCA CTTGCAAGGT chr4:82646369-82646449 56 3.79e-04 CCACCCACAG CTGACTGA GTGAGTCACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:20248072-20248152 1.4e-05 12_[+2]_60 chr6:17715460-17715540 1.4e-05 25_[+2]_47 chr5:34924194-34924274 1.4e-05 26_[+2]_46 chr2:238110804-238110884 1.4e-05 61_[+2]_11 chr13:97793977-97794057 1.4e-05 44_[+2]_28 chr19:48829342-48829422 1.4e-05 36_[+2]_36 chr12:47672025-47672105 1.4e-05 28_[+2]_44 chr14:23005991-23006071 1.4e-05 27_[+2]_45 chr2:27544095-27544175 1.4e-05 31_[+2]_41 chr4:87863470-87863550 4.2e-05 61_[+2]_11 chr4:14858217-14858297 4.2e-05 61_[+2]_11 chr7:99160646-99160726 4.2e-05 41_[+2]_31 chr16:11709676-11709756 4.2e-05 21_[+2]_51 chr19:14495226-14495306 4.2e-05 10_[+2]_62 chr16:69564701-69564781 4.2e-05 50_[+2]_22 chr9:125164821-125164901 4.2e-05 16_[+2]_56 chr15:79471548-79471628 4.2e-05 23_[+2]_49 chr6:35662368-35662448 4.2e-05 64_[+2]_8 chr8:54640411-54640491 4.2e-05 [+2]_72 chr17:4848637-4848717 4.2e-05 44_[+2]_28 chr16:3072411-3072491 4.2e-05 26_[+2]_46 chr2:173118066-173118146 4.2e-05 71_[+2]_1 chr16:1052872-1052952 4.2e-05 23_[+2]_49 chr1:52035580-52035660 4.2e-05 47_[+2]_25 chr15:40559168-40559248 4.2e-05 57_[+2]_15 chr5:56989051-56989131 4.2e-05 34_[+2]_38 chr9:124049451-124049531 5.7e-05 31_[+2]_41 chr1:8933792-8933872 5.7e-05 44_[+2]_28 chr6:14744346-14744426 5.7e-05 45_[+2]_27 chr11:19681860-19681940 5.7e-05 35_[+2]_37 chr10:93661695-93661775 5.7e-05 34_[+2]_38 chr13:101045126-10104520 5.7e-05 62_[+2]_10 chr19:1265519-1265599 5.7e-05 40_[+2]_32 chr11:93885542-93885622 5.7e-05 14_[+2]_58 chr1:224730666-224730746 7.3e-05 63_[+2]_9 chr6:52382490-52382570 7.3e-05 32_[+2]_40 chr13:52123372-52123452 7.3e-05 52_[+2]_20 chr8:131540723-131540803 7.3e-05 66_[+2]_6 chr11:86454567-86454647 7.3e-05 32_[+2]_40 chr4:87932922-87933002 8.8e-05 12_[+2]_60 chr20:60663679-60663759 8.8e-05 70_[+2]_2 chr3:8671289-8671369 8.8e-05 29_[+2]_43 chr17:43201534-43201614 0.00011 19_[+2]_53 chr11:35052404-35052484 0.00011 9_[+2]_63 chr10:72409452-72409532 0.00013 45_[+2]_27 chr16:48443995-48444075 0.00013 31_[+2]_41 chr6:126267579-126267659 0.00013 31_[+2]_41 chr19:47744433-47744513 0.00018 11_[+2]_61 chr20:25218571-25218651 0.00018 [+2]_72 chr9:117314390-117314470 0.00018 21_[+2]_51 chr14:37242430-37242510 0.00018 31_[+2]_41 chr2:47100899-47100979 0.00018 21_[+2]_51 chr12:104802474-10480255 0.00022 21_[+2]_51 chr12:57294553-57294633 0.00022 21_[+2]_51 chr19:13962090-13962170 0.00022 57_[+2]_15 chr3:14307140-14307220 0.00022 24_[+2]_48 chr9:75764546-75764626 0.00024 14_[+2]_58 chr10:104212860-10421294 0.00026 59_[+2]_13 chr2:179107142-179107222 0.00031 25_[+2]_47 chr19:45414612-45414692 0.00033 56_[+2]_16 chr8:66629738-66629818 0.00038 19_[+2]_53 chr4:82646369-82646449 0.00038 55_[+2]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RTGASTCA width=8 seqs=62 chr18:20248072-20248152 ( 13) ATGAGTCA 1 chr6:17715460-17715540 ( 26) ATGAGTCA 1 chr5:34924194-34924274 ( 27) ATGAGTCA 1 chr2:238110804-238110884 ( 62) ATGAGTCA 1 chr13:97793977-97794057 ( 45) ATGAGTCA 1 chr19:48829342-48829422 ( 37) ATGAGTCA 1 chr12:47672025-47672105 ( 29) ATGAGTCA 1 chr14:23005991-23006071 ( 28) ATGAGTCA 1 chr2:27544095-27544175 ( 32) ATGAGTCA 1 chr4:87863470-87863550 ( 62) GTGAGTCA 1 chr4:14858217-14858297 ( 62) GTGAGTCA 1 chr7:99160646-99160726 ( 42) GTGAGTCA 1 chr16:11709676-11709756 ( 22) ATGACTCA 1 chr19:14495226-14495306 ( 11) GTGAGTCA 1 chr16:69564701-69564781 ( 51) ATGACTCA 1 chr9:125164821-125164901 ( 17) ATGACTCA 1 chr15:79471548-79471628 ( 24) ATGACTCA 1 chr6:35662368-35662448 ( 65) ATGACTCA 1 chr8:54640411-54640491 ( 1) GTGAGTCA 1 chr17:4848637-4848717 ( 45) ATGACTCA 1 chr16:3072411-3072491 ( 27) GTGAGTCA 1 chr2:173118066-173118146 ( 72) GTGAGTCA 1 chr16:1052872-1052952 ( 24) ATGACTCA 1 chr1:52035580-52035660 ( 48) GTGAGTCA 1 chr15:40559168-40559248 ( 58) GTGAGTCA 1 chr5:56989051-56989131 ( 35) ATGACTCA 1 chr9:124049451-124049531 ( 32) GTGACTCA 1 chr1:8933792-8933872 ( 45) GTGACTCA 1 chr6:14744346-14744426 ( 46) GTGACTCA 1 chr11:19681860-19681940 ( 36) GTGACTCA 1 chr10:93661695-93661775 ( 35) GTGACTCA 1 chr13:101045126-10104520 ( 63) GTGACTCA 1 chr19:1265519-1265599 ( 41) GTGACTCA 1 chr11:93885542-93885622 ( 15) GTGACTCA 1 chr1:224730666-224730746 ( 64) CTGAGTCA 1 chr6:52382490-52382570 ( 33) CTGAGTCA 1 chr13:52123372-52123452 ( 53) CTGAGTCA 1 chr8:131540723-131540803 ( 67) CTGAGTCA 1 chr11:86454567-86454647 ( 33) CTGAGTCA 1 chr4:87932922-87933002 ( 13) CTGACTCA 1 chr20:60663679-60663759 ( 71) CTGACTCA 1 chr3:8671289-8671369 ( 30) CTGACTCA 1 chr17:43201534-43201614 ( 20) ATGAGTGA 1 chr11:35052404-35052484 ( 10) ATGAGTGA 1 chr10:72409452-72409532 ( 46) ATCAGTCA 1 chr16:48443995-48444075 ( 32) ATCAGTCA 1 chr6:126267579-126267659 ( 32) ATCAGTCA 1 chr19:47744433-47744513 ( 12) ATTACTCA 1 chr20:25218571-25218651 ( 1) ATTACTCA 1 chr9:117314390-117314470 ( 22) ATTACTCA 1 chr14:37242430-37242510 ( 32) GTGAGTGA 1 chr2:47100899-47100979 ( 22) GTTAGTCA 1 chr12:104802474-10480255 ( 22) GTCAGTCA 1 chr12:57294553-57294633 ( 22) ATCACTCA 1 chr19:13962090-13962170 ( 58) TTGAGTCA 1 chr3:14307140-14307220 ( 25) TTGAGTCA 1 chr9:75764546-75764626 ( 15) ATGAATCA 1 chr10:104212860-10421294 ( 60) GTGACTGA 1 chr2:179107142-179107222 ( 26) GTGAATCA 1 chr19:45414612-45414692 ( 57) CTGAGTGA 1 chr8:66629738-66629818 ( 20) CTTACTCA 1 chr4:82646369-82646449 ( 56) CTGACTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.92146 E= 1.3e-031 86 -57 43 -286 -1260 -1260 -1260 210 -1260 -171 167 -153 206 -1260 -1260 -1260 -289 67 106 -1260 -1260 -1260 -1260 210 -1260 178 -144 -1260 206 -1260 -1260 -1260 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 62 E= 1.3e-031 0.435484 0.177419 0.354839 0.032258 0.000000 0.000000 0.000000 1.000000 0.000000 0.080645 0.838710 0.080645 1.000000 0.000000 0.000000 0.000000 0.032258 0.419355 0.548387 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.903226 0.096774 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGASTCA MEME-2 regular expression -------------------------------------------------------------------------------- [AG]TGA[GC]TCA -------------------------------------------------------------------------------- Time 7.99 secs. ******************************************************************************** ******************************************************************************** MOTIF TGACRTCA MEME-3 width = 8 sites = 26 llr = 239 E-value = 2.0e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a14::a pos.-specific C :::61:a: probability G :a:25::: matrix T a::1:a:: bits 2.1 * * * * 1.9 *** *** 1.7 *** *** 1.5 *** *** Relative 1.3 *** *** Entropy 1.0 *** *** (13.2 bits) 0.8 *** *** 0.6 *** **** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr22:22020592-22020672 30 1.51e-05 GCGGCTCCGA TGACGTCA GCTGCGGGCT chr7:139900175-139900255 41 1.51e-05 GCTGAATGGG TGACGTCA TTCATTCACG chr19:2962179-2962259 20 1.51e-05 tttaaatgta tgacgtca tcttatgtaa chr1:28099510-28099590 26 1.51e-05 CCCAACTAGG TGACGTCA TCTCCCCGCC chr19:996511-996591 39 1.51e-05 GAAACAGTGG TGACGTCA TCGTTCAGAC chr14:68086437-68086517 28 1.51e-05 CAGAGTGGGG TGACGTCA TCGAAGGCAC chr2:44314497-44314577 41 1.51e-05 CCCAGTCCGC TGACGTCA CCTTGTTTAC chr15:45748920-45749000 10 1.51e-05 CAGCAGTGA TGACGTCA TTCACCACAT chr2:179107142-179107222 45 1.51e-05 CAGATGTGGA TGACGTCA TCTTTGTATT chr19:47744433-47744513 38 2.88e-05 AATGAGGCGA TGACATCA TCCTGGGGGG chr19:49078115-49078195 7 2.88e-05 AACCGA TGACATCA TCACTAATTC chr20:60663679-60663759 3 2.88e-05 ag tgacatca tagccgtcct chr2:88899792-88899872 13 2.88e-05 GGTACAGAGA TGACATCA CCCTTCACAA chr7:103556565-103556645 40 2.88e-05 ACTGTTGCTC TGACATCA GCCAATGACT chr1:25895547-25895627 29 4.38e-05 GTGTGTGTGA TGAGGTCA CCTCTGGATG chr22:21457213-21457293 11 5.75e-05 GACCATGGGA TGAGATCA TTCTTCACTC chr2:68793126-68793206 16 5.75e-05 gtatctgctc tgagatca ttcctagtac chr2:13105701-13105781 49 5.75e-05 AATACAACAA TGAGATCA TCATGTCTGT chr7:2570028-2570108 45 8.45e-05 GCAGGGGAGG TGAAGTCA TTCCTCCCCC chr10:104212860-10421294 44 8.45e-05 CTCACCCTGG TGATGTCA TGCTATTCGT chr4:82646369-82646449 11 8.45e-05 CACATGTTGC TGATGTCA GCCCAGCTGT chr5:141742462-141742542 66 1.09e-04 GCTCCCGGGG TGAAATCA CAAAGGA chr20:40325244-40325324 66 1.09e-04 CAGTCTCTGC TGATATCA GCTGCTG chr11:12746042-12746122 66 1.09e-04 TGCTTTCTTC TGAAATCA TAAAATG chr19:8488948-8489028 8 1.24e-04 CTTTGTG TGACCTCA CAGTCTGCCT chr12:109023696-10902377 23 1.24e-04 CACTATCTGG TGACCTCA TTCCTCCTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:22020592-22020672 1.5e-05 29_[+3]_43 chr7:139900175-139900255 1.5e-05 40_[+3]_32 chr19:2962179-2962259 1.5e-05 19_[+3]_53 chr1:28099510-28099590 1.5e-05 25_[+3]_47 chr19:996511-996591 1.5e-05 38_[+3]_34 chr14:68086437-68086517 1.5e-05 27_[+3]_45 chr2:44314497-44314577 1.5e-05 40_[+3]_32 chr15:45748920-45749000 1.5e-05 9_[+3]_63 chr2:179107142-179107222 1.5e-05 44_[+3]_28 chr19:47744433-47744513 2.9e-05 37_[+3]_35 chr19:49078115-49078195 2.9e-05 6_[+3]_66 chr20:60663679-60663759 2.9e-05 2_[+3]_70 chr2:88899792-88899872 2.9e-05 12_[+3]_60 chr7:103556565-103556645 2.9e-05 39_[+3]_33 chr1:25895547-25895627 4.4e-05 28_[+3]_44 chr22:21457213-21457293 5.7e-05 10_[+3]_62 chr2:68793126-68793206 5.7e-05 15_[+3]_57 chr2:13105701-13105781 5.7e-05 48_[+3]_24 chr7:2570028-2570108 8.4e-05 44_[+3]_28 chr10:104212860-10421294 8.4e-05 43_[+3]_29 chr4:82646369-82646449 8.4e-05 10_[+3]_62 chr5:141742462-141742542 0.00011 65_[+3]_7 chr20:40325244-40325324 0.00011 65_[+3]_7 chr11:12746042-12746122 0.00011 65_[+3]_7 chr19:8488948-8489028 0.00012 7_[+3]_65 chr12:109023696-10902377 0.00012 22_[+3]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACRTCA width=8 seqs=26 chr22:22020592-22020672 ( 30) TGACGTCA 1 chr7:139900175-139900255 ( 41) TGACGTCA 1 chr19:2962179-2962259 ( 20) TGACGTCA 1 chr1:28099510-28099590 ( 26) TGACGTCA 1 chr19:996511-996591 ( 39) TGACGTCA 1 chr14:68086437-68086517 ( 28) TGACGTCA 1 chr2:44314497-44314577 ( 41) TGACGTCA 1 chr15:45748920-45749000 ( 10) TGACGTCA 1 chr2:179107142-179107222 ( 45) TGACGTCA 1 chr19:47744433-47744513 ( 38) TGACATCA 1 chr19:49078115-49078195 ( 7) TGACATCA 1 chr20:60663679-60663759 ( 3) TGACATCA 1 chr2:88899792-88899872 ( 13) TGACATCA 1 chr7:103556565-103556645 ( 40) TGACATCA 1 chr1:25895547-25895627 ( 29) TGAGGTCA 1 chr22:21457213-21457293 ( 11) TGAGATCA 1 chr2:68793126-68793206 ( 16) TGAGATCA 1 chr2:13105701-13105781 ( 49) TGAGATCA 1 chr7:2570028-2570108 ( 45) TGAAGTCA 1 chr10:104212860-10421294 ( 44) TGATGTCA 1 chr4:82646369-82646449 ( 11) TGATGTCA 1 chr5:141742462-141742542 ( 66) TGAAATCA 1 chr20:40325244-40325324 ( 66) TGATATCA 1 chr11:12746042-12746122 ( 66) TGAAATCA 1 chr19:8488948-8489028 ( 8) TGACCTCA 1 chr12:109023696-10902377 ( 23) TGACCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.6186 E= 2.0e-005 -1134 -1134 -1134 210 -1134 -1134 192 -1134 206 -1134 -1134 -1134 -105 122 -78 -102 82 -178 92 -1134 -1134 -1134 -1134 210 -1134 192 -1134 -1134 206 -1134 -1134 -1134 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 26 E= 2.0e-005 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.115385 0.615385 0.153846 0.115385 0.423077 0.076923 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACRTCA MEME-3 regular expression -------------------------------------------------------------------------------- TGAC[GA]TCA -------------------------------------------------------------------------------- Time 11.26 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGRRGGR MEME-4 width = 8 sites = 41 llr = 336 E-value = 3.8e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::46::6 pos.-specific C :::1:::: probability G aaa34aa4 matrix T :::2:::: bits 2.1 1.9 *** ** 1.7 *** ** 1.5 *** ** Relative 1.3 *** ** Entropy 1.0 *** **** (11.8 bits) 0.8 *** **** 0.6 *** **** 0.4 *** **** 0.2 ******** 0.0 -------- Multilevel GGGAAGGA consensus GG G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:26602879-26602959 30 1.72e-05 GGTAGGGTTG GGGAAGGA GGGACACTGC chr18:3603603-3603683 7 1.72e-05 TAAGGA GGGAAGGA AGTTACAATC chr2:69997536-69997616 64 1.72e-05 TTCCAGCGAA GGGAAGGA TTCAGTAGG chr1:52216045-52216125 25 1.72e-05 TCTGGTAGCT GGGAAGGA GGGGAGCATG chr20:30424138-30424218 66 1.72e-05 CGTGGGGGGA GGGAAGGA AATGAAG chr12:47672025-47672105 11 1.72e-05 GGAGTGACTG GGGAAGGA GCTACAGACC chr5:156891611-156891691 23 1.72e-05 ggaggggcgg gggaagga gtcaaggatg chr19:55718636-55718716 43 1.72e-05 ACCCTTGCAT GGGAAGGA GGGGCCGGTG chr19:45414612-45414692 69 3.61e-05 gagtgaggag gggaaggg tcag chr3:46977082-46977162 29 3.61e-05 AGGGGGCTGG GGGAAGGG AGCTGCCTTA chr1:8933792-8933872 1 3.61e-05 . GGGAAGGG CTGGGGTTCC chr9:124049451-124049531 69 5.50e-05 CTGAGGACAG GGGGAGGA Gtgg chr9:117314390-117314470 30 5.50e-05 CCATTACTCA GGGGAGGA TGGTGGTGAG chr16:70780753-70780833 21 5.50e-05 ATGGAGGTGG GGGGAGGA TGGGGGAATG chr10:112261172-11226125 68 7.39e-05 TGCAGCTTCT GGGAGGGA GTTGG chr17:80225570-80225650 36 7.39e-05 CTCGCCAGCC GGGAGGGA GGGTGACTCA chr16:3072411-3072491 19 7.39e-05 CTGAGCTGGA GGGAGGGA GTGAGTCAGC chr1:27449293-27449373 58 7.39e-05 ACAGGGGAGA GGGAGGGA CAGGGACTGG chr17:81031509-81031589 67 9.47e-05 GCGTCGATGT GGGGAGGG CCTGTC chr13:52123372-52123452 5 9.47e-05 tctt ggggaggg gcgctcagga chr10:79165598-79165678 20 9.47e-05 GGAGGCAGGT GGGGAGGG TGCACTGGTG chr17:64344879-64344959 15 9.47e-05 AACAGCAGAG GGGGAGGG CAGCTGGAAG chr19:1265519-1265599 56 9.47e-05 TCAGGCCTGT GGGGAGGG GGTGAGTCAC chr12:104998041-10499812 23 9.47e-05 GGGAGGCATT GGGGAGGG CGTAGGTGGA chr11:47545275-47545355 52 9.47e-05 TGAGGGGATG GGGGAGGG GAGTGAAAGG chr15:52313474-52313554 5 1.12e-04 GGTC GGGTAGGA GGAAGCTTAC chr6:91189102-91189182 51 1.12e-04 CACCCTGCCT GGGTAGGA AAACTCTCCC chr7:44678926-44679006 53 1.32e-04 GACTCATACA GGGAGGGG TGGGGCCAGT chr8:129162379-129162459 54 1.53e-04 CCACTGTGGT GGGGGGGA GTGGACAGTC chr3:45085346-45085426 10 1.91e-04 GAAACTAGG GGGCAGGA GAATTAAAAG chr9:123638850-123638930 29 1.91e-04 GGCCGGGCGG GGGCAGGA AGCGAGGATG chr19:47744433-47744513 50 2.13e-04 ACATCATCCT GGGGGGGG TTGACTAATG chr15:78505097-78505177 65 2.53e-04 TCTGCTCCTG GGGTGGGA CACCCTGC chr16:85063163-85063243 40 2.53e-04 CCCCAGGAAG GGGTGGGA TGAGTCATGC chr7:103556565-103556645 63 2.53e-04 TGACTCATCT GGGCAGGG CTACTGCTGG chr4:122632871-122632951 27 2.94e-04 AAGCGGCAGT GGGCGGGA GTCACAGCGG chr17:79870760-79870840 14 2.94e-04 TGCACACACA GGGTGGGG CAGCAGTGGC chr13:31778934-31779014 41 2.94e-04 ctgggagaaa gggtgggg gaaaggatga chr17:62062603-62062683 56 2.94e-04 CTGCTCAAAA GGGTGGGG AGGCTAATTT chr19:13962090-13962170 70 3.17e-04 GAGTCACACA GGGCGGGG TCC chr14:68086437-68086517 67 3.17e-04 GCAGAGCGGT GGGCGGGG CCTGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:26602879-26602959 1.7e-05 29_[+4]_43 chr18:3603603-3603683 1.7e-05 6_[+4]_66 chr2:69997536-69997616 1.7e-05 63_[+4]_9 chr1:52216045-52216125 1.7e-05 24_[+4]_48 chr20:30424138-30424218 1.7e-05 65_[+4]_7 chr12:47672025-47672105 1.7e-05 10_[+4]_62 chr5:156891611-156891691 1.7e-05 22_[+4]_50 chr19:55718636-55718716 1.7e-05 42_[+4]_30 chr19:45414612-45414692 3.6e-05 68_[+4]_4 chr3:46977082-46977162 3.6e-05 28_[+4]_44 chr1:8933792-8933872 3.6e-05 [+4]_72 chr9:124049451-124049531 5.5e-05 68_[+4]_4 chr9:117314390-117314470 5.5e-05 29_[+4]_43 chr16:70780753-70780833 5.5e-05 20_[+4]_52 chr10:112261172-11226125 7.4e-05 67_[+4]_5 chr17:80225570-80225650 7.4e-05 35_[+4]_37 chr16:3072411-3072491 7.4e-05 18_[+4]_54 chr1:27449293-27449373 7.4e-05 57_[+4]_15 chr17:81031509-81031589 9.5e-05 66_[+4]_6 chr13:52123372-52123452 9.5e-05 4_[+4]_68 chr10:79165598-79165678 9.5e-05 19_[+4]_53 chr17:64344879-64344959 9.5e-05 14_[+4]_58 chr19:1265519-1265599 9.5e-05 55_[+4]_17 chr12:104998041-10499812 9.5e-05 22_[+4]_50 chr11:47545275-47545355 9.5e-05 51_[+4]_21 chr15:52313474-52313554 0.00011 4_[+4]_68 chr6:91189102-91189182 0.00011 50_[+4]_22 chr7:44678926-44679006 0.00013 52_[+4]_20 chr8:129162379-129162459 0.00015 53_[+4]_19 chr3:45085346-45085426 0.00019 9_[+4]_63 chr9:123638850-123638930 0.00019 28_[+4]_44 chr19:47744433-47744513 0.00021 49_[+4]_23 chr15:78505097-78505177 0.00025 64_[+4]_8 chr16:85063163-85063243 0.00025 39_[+4]_33 chr7:103556565-103556645 0.00025 62_[+4]_10 chr4:122632871-122632951 0.00029 26_[+4]_46 chr17:79870760-79870840 0.00029 13_[+4]_59 chr13:31778934-31779014 0.00029 40_[+4]_32 chr17:62062603-62062683 0.00029 55_[+4]_17 chr19:13962090-13962170 0.00032 69_[+4]_3 chr14:68086437-68086517 0.00032 66_[+4]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGRRGGR width=8 seqs=41 chr1:26602879-26602959 ( 30) GGGAAGGA 1 chr18:3603603-3603683 ( 7) GGGAAGGA 1 chr2:69997536-69997616 ( 64) GGGAAGGA 1 chr1:52216045-52216125 ( 25) GGGAAGGA 1 chr20:30424138-30424218 ( 66) GGGAAGGA 1 chr12:47672025-47672105 ( 11) GGGAAGGA 1 chr5:156891611-156891691 ( 23) GGGAAGGA 1 chr19:55718636-55718716 ( 43) GGGAAGGA 1 chr19:45414612-45414692 ( 69) GGGAAGGG 1 chr3:46977082-46977162 ( 29) GGGAAGGG 1 chr1:8933792-8933872 ( 1) GGGAAGGG 1 chr9:124049451-124049531 ( 69) GGGGAGGA 1 chr9:117314390-117314470 ( 30) GGGGAGGA 1 chr16:70780753-70780833 ( 21) GGGGAGGA 1 chr10:112261172-11226125 ( 68) GGGAGGGA 1 chr17:80225570-80225650 ( 36) GGGAGGGA 1 chr16:3072411-3072491 ( 19) GGGAGGGA 1 chr1:27449293-27449373 ( 58) GGGAGGGA 1 chr17:81031509-81031589 ( 67) GGGGAGGG 1 chr13:52123372-52123452 ( 5) GGGGAGGG 1 chr10:79165598-79165678 ( 20) GGGGAGGG 1 chr17:64344879-64344959 ( 15) GGGGAGGG 1 chr19:1265519-1265599 ( 56) GGGGAGGG 1 chr12:104998041-10499812 ( 23) GGGGAGGG 1 chr11:47545275-47545355 ( 52) GGGGAGGG 1 chr15:52313474-52313554 ( 5) GGGTAGGA 1 chr6:91189102-91189182 ( 51) GGGTAGGA 1 chr7:44678926-44679006 ( 53) GGGAGGGG 1 chr8:129162379-129162459 ( 54) GGGGGGGA 1 chr3:45085346-45085426 ( 10) GGGCAGGA 1 chr9:123638850-123638930 ( 29) GGGCAGGA 1 chr19:47744433-47744513 ( 50) GGGGGGGG 1 chr15:78505097-78505177 ( 65) GGGTGGGA 1 chr16:85063163-85063243 ( 40) GGGTGGGA 1 chr7:103556565-103556645 ( 63) GGGCAGGG 1 chr4:122632871-122632951 ( 27) GGGCGGGA 1 chr17:79870760-79870840 ( 14) GGGTGGGG 1 chr13:31778934-31779014 ( 41) GGGTGGGG 1 chr17:62062603-62062683 ( 56) GGGTGGGG 1 chr19:13962090-13962170 ( 70) GGGCGGGG 1 chr14:68086437-68086517 ( 67) GGGCGGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2866 E= 3.8e-005 -1200 -1200 192 -1200 -1200 -1200 192 -1200 -1200 -1200 192 -1200 71 -85 15 -45 141 -1200 47 -1200 -1200 -1200 192 -1200 -1200 -1200 192 -1200 123 -1200 74 -1200 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 41 E= 3.8e-005 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.390244 0.146341 0.292683 0.170732 0.634146 0.000000 0.365854 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.560976 0.000000 0.439024 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGRRGGR MEME-4 regular expression -------------------------------------------------------------------------------- GGG[AG][AG]GG[AG] -------------------------------------------------------------------------------- Time 14.50 secs. ******************************************************************************** ******************************************************************************** MOTIF TTCTTATC MEME-5 width = 8 sites = 10 llr = 101 E-value = 1.5e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::7:: pos.-specific C ::a::::a probability G 3::::::: matrix T 7a:aa3a: bits 2.1 * ** * 1.9 **** ** 1.7 **** ** 1.5 **** ** Relative 1.3 ******** Entropy 1.0 ******** (14.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTCTTATC consensus G T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:25910631-25910711 49 1.17e-05 GTCATCATTG TTCTTATC ACCCGTGGCA chr1:41575423-41575503 37 1.17e-05 TGAGTCATAT TTCTTATC AGCAAGGTTT chr16:85393049-85393129 8 1.17e-05 cacccac ttcttatc tgagggacct chr11:44782533-44782613 15 1.17e-05 tgctacacat ttcttatc gaatctcaca chr2:151024298-151024378 50 1.17e-05 ATACCAAGCA TTCTTATC TGAAAGCTGT chr11:19681860-19681940 24 2.31e-05 CCTGTCTGGT TTCTTTTC TCGTGTGACT chr8:126606412-126606492 29 2.31e-05 GAAAGTCAGC TTCTTTTC CGTGTACTGT chr2:170526799-170526879 8 3.63e-05 CTTATTT GTCTTATC GCCGTCACAC chr1:53373365-53373445 56 3.63e-05 TGAGTCATCT GTCTTATC ACAGAACTCC chr20:40325244-40325324 28 4.91e-05 CCAGAGTTCT GTCTTTTC CAGGAATCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:25910631-25910711 1.2e-05 48_[+5]_24 chr1:41575423-41575503 1.2e-05 36_[+5]_36 chr16:85393049-85393129 1.2e-05 7_[+5]_65 chr11:44782533-44782613 1.2e-05 14_[+5]_58 chr2:151024298-151024378 1.2e-05 49_[+5]_23 chr11:19681860-19681940 2.3e-05 23_[+5]_49 chr8:126606412-126606492 2.3e-05 28_[+5]_44 chr2:170526799-170526879 3.6e-05 7_[+5]_65 chr1:53373365-53373445 3.6e-05 55_[+5]_17 chr20:40325244-40325324 4.9e-05 27_[+5]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTCTTATC width=8 seqs=10 chr6:25910631-25910711 ( 49) TTCTTATC 1 chr1:41575423-41575503 ( 37) TTCTTATC 1 chr16:85393049-85393129 ( 8) TTCTTATC 1 chr11:44782533-44782613 ( 15) TTCTTATC 1 chr2:151024298-151024378 ( 50) TTCTTATC 1 chr11:19681860-19681940 ( 24) TTCTTTTC 1 chr8:126606412-126606492 ( 29) TTCTTTTC 1 chr2:170526799-170526879 ( 8) GTCTTATC 1 chr1:53373365-53373445 ( 56) GTCTTATC 1 chr20:40325244-40325324 ( 28) GTCTTTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.7767 E= 1.5e+004 -997 -997 19 158 -997 -997 -997 210 -997 192 -997 -997 -997 -997 -997 210 -997 -997 -997 210 155 -997 -997 36 -997 -997 -997 210 -997 192 -997 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 1.5e+004 0.000000 0.000000 0.300000 0.700000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.700000 0.000000 0.000000 0.300000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTCTTATC MEME-5 regular expression -------------------------------------------------------------------------------- [TG]TCTT[AT]TC -------------------------------------------------------------------------------- Time 17.67 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:8442284-8442364 2.98e-04 22_[+2(1.37e-05)]_50 chr8:23133646-23133726 1.20e-03 38_[+1(1.34e-05)]_34 chr13:93942917-93942997 1.49e-03 43_[+2(1.37e-05)]_29 chr5:56989051-56989131 6.86e-04 35_[+1(4.19e-05)]_16_[+2(1.37e-05)]_\ 13 chr2:47100899-47100979 3.35e-03 35_[+2(1.37e-05)]_37 chr2:179107142-179107222 1.22e-03 44_[+3(1.51e-05)]_28 chr11:47545275-47545355 4.82e-06 34_[+1(1.34e-05)]_9_[+4(9.47e-05)]_\ 21 chr2:27544095-27544175 5.70e-04 31_[+2(1.37e-05)]_17_[+1(2.68e-05)]_\ 16 chr9:140330609-140330689 1.59e-03 35_[+1(1.34e-05)]_37 chr8:126606412-126606492 6.21e-05 28_[+5(2.31e-05)]_12_[+2(4.24e-05)]_\ 24 chr11:122954458-12295453 6.09e-04 20_[+1(4.19e-05)]_52 chr15:40559168-40559248 1.48e-03 30_[+2(4.24e-05)]_19_[+2(4.24e-05)]_\ 15 chr11:12746042-12746122 9.98e-06 33_[+1(1.34e-05)]_39 chr9:123638850-123638930 8.21e-03 80 chr6:6807153-6807233 5.54e-03 39_[+1(4.19e-05)]_33 chr17:62062603-62062683 2.32e-05 29_[+2(1.37e-05)]_43 chr1:27449293-27449373 1.57e-04 41_[+1(4.19e-05)]_8_[+4(7.39e-05)]_\ 15 chr17:33760742-33760822 3.54e-04 32_[+1(1.34e-05)]_40 chr2:8685226-8685306 2.84e-03 43_[+1(4.19e-05)]_29 chr15:45748920-45749000 1.96e-03 9_[+3(1.51e-05)]_63 chr1:32166799-32166879 1.02e-03 28_[+1(4.19e-05)]_44 chr1:234881646-234881726 5.04e-03 49_[+1(2.68e-05)]_23 chr4:37630750-37630830 4.10e-04 46_[+1(1.34e-05)]_26 chr3:44277563-44277643 6.63e-04 31_[+1(2.68e-05)]_41 chr16:79692300-79692380 8.33e-04 34_[+1(1.34e-05)]_38 chr21:47608429-47608509 5.72e-04 47_[+2(1.37e-05)]_25 chr19:55718636-55718716 2.62e-05 25_[+2(1.37e-05)]_9_[+4(1.72e-05)]_\ 30 chr1:205263840-205263920 6.40e-04 43_[+1(1.34e-05)]_29 chr12:104998041-10499812 6.07e-05 22_[+4(9.47e-05)]_9_[+2(1.37e-05)]_\ 33 chr5:156891611-156891691 3.32e-06 22_[+4(1.72e-05)]_8_[+1(1.34e-05)]_\ 34 chr16:3692835-3692915 3.65e-04 44_[+1(1.34e-05)]_28 chr2:128155958-128156038 6.88e-04 30_[+2(1.37e-05)]_42 chr17:32269580-32269660 2.28e-04 46_[+1(2.68e-05)]_26 chr2:65593875-65593955 2.31e-03 35_[+2(1.37e-05)]_37 chr20:1396786-1396866 7.34e-04 53_[+1(1.34e-05)]_19 chr3:157230422-157230502 2.21e-03 39_[+2(4.24e-05)]_33 chr11:93885542-93885622 8.14e-05 15_[+1(4.19e-05)]_32_[+1(1.34e-05)]_\ 17 chr6:111698953-111699033 1.38e-05 29_[+5(7.49e-05)]_6_[+2(1.37e-05)]_\ 29 chr3:14307140-14307220 7.77e-04 50_[+1(1.34e-05)]_22 chr14:23005991-23006071 1.50e-04 27_[+2(1.37e-05)]_3_[+2(4.24e-05)]_\ 34 chr20:44844673-44844753 8.35e-04 49_[+1(4.19e-05)]_23 chr1:195869040-195869120 1.17e-03 46_[+1(4.19e-05)]_26 chr8:101912785-101912865 7.89e-04 39_[+1(1.34e-05)]_33 chr19:1265519-1265599 2.51e-04 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chr4:14858217-14858297 4.04e-04 15_[+1(2.68e-05)]_38_[+2(4.24e-05)]_\ 11 chr15:52313474-52313554 9.42e-05 52_[+1(1.34e-05)]_20 chr3:5236577-5236657 1.91e-03 49_[+1(4.19e-05)]_23 chr7:139900175-139900255 1.65e-02 40_[+3(1.51e-05)]_32 chr20:34673815-34673895 5.85e-03 29_[+1(4.19e-05)]_43 chr12:104802474-10480255 5.08e-03 40_[+2(4.24e-05)]_32 chr6:126267579-126267659 4.08e-05 53_[+2(1.37e-05)]_19 chr6:17715460-17715540 1.05e-03 25_[+2(1.37e-05)]_4_[+1(1.34e-05)]_\ 35 chr14:102438865-10243894 1.07e-03 50_[+1(1.34e-05)]_22 chr4:122632871-122632951 7.64e-04 51_[+2(5.75e-05)]_21 chr15:40391066-40391146 1.43e-03 43_[+2(4.24e-05)]_29 chr11:108368486-10836856 4.63e-03 33_[+1(4.19e-05)]_39 chr11:45901868-45901948 2.71e-04 40_[+2(1.37e-05)]_32 chr9:75764546-75764626 1.07e-03 48_[+1(2.68e-05)]_24 chr1:55645065-55645145 2.05e-04 39_[+1(1.34e-05)]_33 chr17:15824161-15824241 5.15e-03 35_[+1(4.19e-05)]_37 chr7:133768848-133768928 1.59e-04 46_[+1(1.34e-05)]_26 chr4:87863470-87863550 9.14e-04 38_[+1(1.34e-05)]_15_[+2(4.24e-05)]_\ 11 chr5:68509748-68509828 2.03e-04 37_[+2(1.37e-05)]_35 chr6:37759273-37759353 4.93e-05 9_[+1(1.34e-05)]_63 chr17:43201534-43201614 2.53e-03 45_[+2(4.24e-05)]_27 chr9:132949589-132949669 5.99e-04 31_[+2(1.37e-05)]_41 chr6:25910631-25910711 2.59e-05 35_[+1(2.68e-05)]_5_[+5(1.17e-05)]_\ 24 chr6:135613042-135613122 1.60e-03 54_[+1(1.34e-05)]_18 chr18:20248072-20248152 3.82e-04 12_[+2(1.37e-05)]_5_[+1(1.34e-05)]_\ 47 chr16:48443995-48444075 3.68e-04 44_[+2(1.37e-05)]_28 chr5:141742462-141742542 4.83e-05 35_[+2(1.37e-05)]_37 chr22:40361854-40361934 1.99e-03 18_[+1(2.68e-05)]_54 chr19:49078115-49078195 1.40e-02 6_[+3(2.88e-05)]_41_[+3(2.88e-05)]_\ 17 chr2:68793126-68793206 2.66e-05 15_[+3(5.75e-05)]_24_[+1(1.34e-05)]_\ 25 chr8:66629738-66629818 4.58e-03 36_[+1(2.68e-05)]_36 chr10:72409452-72409532 1.55e-03 31_[+1(1.34e-05)]_41 chr2:234259537-234259617 2.34e-04 33_[+1(1.34e-05)]_39 chr19:47744433-47744513 2.84e-05 37_[+3(2.88e-05)]_35 chr19:52302742-52302822 7.11e-03 30_[+1(4.19e-05)]_42 chr19:8488948-8489028 7.59e-05 51_[+1(1.34e-05)]_21 chr3:33984162-33984242 5.74e-04 45_[+2(1.37e-05)]_27 chr22:21213168-21213248 6.89e-01 80 chr17:47049838-47049918 9.70e-03 7_[+1(4.19e-05)]_65 chr19:46696533-46696613 6.16e-03 28_[+1(2.68e-05)]_44 chr22:21457213-21457293 3.12e-02 10_[+3(5.75e-05)]_62 chr1:156884438-156884518 8.86e-03 58_[+1(4.19e-05)]_14 chr3:196001618-196001698 5.23e-04 53_[+2(1.37e-05)]_19 chr19:9186435-9186515 2.08e-03 1_[+1(4.19e-05)]_71 chr22:22020592-22020672 2.75e-02 29_[+3(1.51e-05)]_43 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************