******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/JUN.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr5:77826334-77826414 1.0000 80 chr1:90441311-90441391 1.0000 80 chr6:170122758-170122838 1.0000 80 chr1:147323476-147323556 1.0000 80 chr12:76577447-76577527 1.0000 80 chr1:234680423-234680503 1.0000 80 chr5:67752627-67752707 1.0000 80 chr1:145042873-145042953 1.0000 80 chrX:21945098-21945178 1.0000 80 chr12:110481096-11048117 1.0000 80 chr2:23980708-23980788 1.0000 80 chr16:11709672-11709752 1.0000 80 chr2:151024290-151024370 1.0000 80 chr4:25175270-25175350 1.0000 80 chr7:107661136-107661216 1.0000 80 chr17:31082179-31082259 1.0000 80 chr3:150089719-150089799 1.0000 80 chr10:65467217-65467297 1.0000 80 chr1:52216051-52216131 1.0000 80 chr11:86304102-86304182 1.0000 80 chr10:93661695-93661775 1.0000 80 chr1:25895551-25895631 1.0000 80 chr4:77262347-77262427 1.0000 80 chr5:68026661-68026741 1.0000 80 chr5:140900862-140900942 1.0000 80 chr7:152406893-152406973 1.0000 80 chr7:44907051-44907131 1.0000 80 chr6:133285464-133285544 1.0000 80 chr5:56989053-56989133 1.0000 80 chr4:72978385-72978465 1.0000 80 chr11:44782527-44782607 1.0000 80 chr3:44397285-44397365 1.0000 80 chr6:111698947-111699027 1.0000 80 chr8:102464061-102464141 1.0000 80 chr3:65590651-65590731 1.0000 80 chr11:3887164-3887244 1.0000 80 chr1:52035581-52035661 1.0000 80 chr6:40965391-40965471 1.0000 80 chr12:102868400-10286848 1.0000 80 chr14:23006006-23006086 1.0000 80 chr2:88899786-88899866 1.0000 80 chr9:99102153-99102233 1.0000 80 chr7:37071680-37071760 1.0000 80 chr4:109908973-109909053 1.0000 80 chr5:40689694-40689774 1.0000 80 chr1:87258961-87259041 1.0000 80 chr12:47672026-47672106 1.0000 80 chr3:65016686-65016766 1.0000 80 chr12:66049071-66049151 1.0000 80 chr8:124161486-124161566 1.0000 80 chr6:130499989-130500069 1.0000 80 chr13:97908757-97908837 1.0000 80 chr3:118703731-118703811 1.0000 80 chr1:234881624-234881704 1.0000 80 chr6:34665858-34665938 1.0000 80 chr15:50429616-50429696 1.0000 80 chr10:22919698-22919778 1.0000 80 chr8:38895806-38895886 1.0000 80 chr16:69511165-69511245 1.0000 80 chr11:95440233-95440313 1.0000 80 chr1:244486426-244486506 1.0000 80 chr3:196540955-196541035 1.0000 80 chr12:76371817-76371897 1.0000 80 chr3:45085346-45085426 1.0000 80 chr5:39167418-39167498 1.0000 80 chr10:93347942-93348022 1.0000 80 chr13:29050434-29050514 1.0000 80 chr3:44277563-44277643 1.0000 80 chr4:87932956-87933036 1.0000 80 chr3:14307168-14307248 1.0000 80 chr1:168368401-168368481 1.0000 80 chr17:45275348-45275428 1.0000 80 chr2:102954617-102954697 1.0000 80 chr21:43854263-43854343 1.0000 80 chr4:187751125-187751205 1.0000 80 chr2:88565280-88565360 1.0000 80 chr11:96095105-96095185 1.0000 80 chr17:39010635-39010715 1.0000 80 chr1:19330011-19330091 1.0000 80 chr11:93885528-93885608 1.0000 80 chr13:101045123-10104520 1.0000 80 chr12:76328377-76328457 1.0000 80 chr6:134557256-134557336 1.0000 80 chr10:3848163-3848243 1.0000 80 chr10:11594259-11594339 1.0000 80 chr17:32269599-32269679 1.0000 80 chr12:109023675-10902375 1.0000 80 chr9:75764551-75764631 1.0000 80 chr2:191199328-191199408 1.0000 80 chr3:39219326-39219406 1.0000 80 chr1:211210518-211210598 1.0000 80 chr11:86451825-86451905 1.0000 80 chr7:871488-871568 1.0000 80 chr2:28499122-28499202 1.0000 80 chr2:196478768-196478848 1.0000 80 chr18:55487412-55487492 1.0000 80 chr10:16993241-16993321 1.0000 80 chr11:35052396-35052476 1.0000 80 chr19:55670381-55670461 1.0000 80 chr17:76733601-76733681 1.0000 80 chr22:47330947-47331027 1.0000 80 chr7:103556581-103556661 1.0000 80 chrX:118824906-118824986 1.0000 80 chr1:179845503-179845583 1.0000 80 chr12:51008178-51008258 1.0000 80 chr9:111880337-111880417 1.0000 80 chr5:88609773-88609853 1.0000 80 chr6:14744381-14744461 1.0000 80 chr6:53178723-53178803 1.0000 80 chrX:119683954-119684034 1.0000 80 chr11:86454582-86454662 1.0000 80 chr15:49238376-49238456 1.0000 80 chr11:9634785-9634865 1.0000 80 chr4:122749149-122749229 1.0000 80 chr7:99160649-99160729 1.0000 80 chr2:65593879-65593959 1.0000 80 chr12:28119905-28119985 1.0000 80 chr6:139769336-139769416 1.0000 80 chr2:150990312-150990392 1.0000 80 chr17:64344886-64344966 1.0000 80 chr20:30287130-30287210 1.0000 80 chr2:170046840-170046920 1.0000 80 chr6:111587225-111587305 1.0000 80 chr21:35028107-35028187 1.0000 80 chr2:170526786-170526866 1.0000 80 chr15:89613960-89614040 1.0000 80 chr1:224730649-224730729 1.0000 80 chr11:46096916-46096996 1.0000 80 chr7:142661692-142661772 1.0000 80 chr2:240179387-240179467 1.0000 80 chr6:155475379-155475459 1.0000 80 chr21:47608442-47608522 1.0000 80 chrX:65370197-65370277 1.0000 80 chr5:142625754-142625834 1.0000 80 chr20:60663691-60663771 1.0000 80 chr14:31500924-31501004 1.0000 80 chr22:22191630-22191710 1.0000 80 chr11:57170248-57170328 1.0000 80 chr2:112814128-112814208 1.0000 80 chr5:174945014-174945094 1.0000 80 chr1:237068542-237068622 1.0000 80 chrX:67791717-67791797 1.0000 80 chr16:8138110-8138190 1.0000 80 chr7:120625377-120625457 1.0000 80 chr15:40559163-40559243 1.0000 80 chr1:68316491-68316571 1.0000 80 chr3:11330929-11331009 1.0000 80 chr2:13105702-13105782 1.0000 80 chr1:41575406-41575486 1.0000 80 chr20:40325249-40325329 1.0000 80 chr18:57213553-57213633 1.0000 80 chr5:55293684-55293764 1.0000 80 chr1:114347503-114347583 1.0000 80 chr21:22572617-22572697 1.0000 80 chr6:16345757-16345837 1.0000 80 chr6:42192381-42192461 1.0000 80 chr13:50819367-50819447 1.0000 80 chr11:65138800-65138880 1.0000 80 chr16:24474599-24474679 1.0000 80 chr1:212408108-212408188 1.0000 80 chr18:55513633-55513713 1.0000 80 chr1:219321194-219321274 1.0000 80 chr2:182675677-182675757 1.0000 80 chr3:99945805-99945885 1.0000 80 chr15:96100957-96101037 1.0000 80 chr12:92933184-92933264 1.0000 80 chr4:80120156-80120236 1.0000 80 chr2:173913688-173913768 1.0000 80 chr10:21625946-21626026 1.0000 80 chr22:30303866-30303946 1.0000 80 chr7:12762565-12762645 1.0000 80 chr17:43398438-43398518 1.0000 80 chr15:41782689-41782769 1.0000 80 chr6:17715451-17715531 1.0000 80 chr14:22802555-22802635 1.0000 80 chr11:111913526-11191360 1.0000 80 chr10:72475745-72475825 1.0000 80 chr2:159071093-159071173 1.0000 80 chr12:122203590-12220367 1.0000 80 chr15:91379652-91379732 1.0000 80 chr1:52127010-52127090 1.0000 80 chr22:22133425-22133505 1.0000 80 chr15:67316844-67316924 1.0000 80 chr21:45437672-45437752 1.0000 80 chr1:222161393-222161473 1.0000 80 chr1:33840129-33840209 1.0000 80 chr6:161650281-161650361 1.0000 80 chr6:119468618-119468698 1.0000 80 chr2:191269445-191269525 1.0000 80 chr17:42209784-42209864 1.0000 80 chr10:64996294-64996374 1.0000 80 chr8:54640442-54640522 1.0000 80 chr11:129836365-12983644 1.0000 80 chr2:69997518-69997598 1.0000 80 chr15:100243957-10024403 1.0000 80 chr3:182727653-182727733 1.0000 80 chr12:1727845-1727925 1.0000 80 chrX:30301700-30301780 1.0000 80 chr3:33984156-33984236 1.0000 80 chr7:92262816-92262896 1.0000 80 chr14:102438878-10243895 1.0000 80 chr6:11918895-11918975 1.0000 80 chr5:34924186-34924266 1.0000 80 chr12:6277131-6277211 1.0000 80 chr11:65042800-65042880 1.0000 80 chr14:34966227-34966307 1.0000 80 chr2:74079350-74079430 1.0000 80 chr2:173118027-173118107 1.0000 80 chr13:44717537-44717617 1.0000 80 chr9:6014845-6014925 1.0000 80 chr17:33760732-33760812 1.0000 80 chr12:107370262-10737034 1.0000 80 chr16:25644972-25645052 1.0000 80 chr10:17258341-17258421 1.0000 80 chr5:112214568-112214648 1.0000 80 chr17:43229444-43229524 1.0000 80 chr3:152884147-152884227 1.0000 80 chr5:32537697-32537777 1.0000 80 chr5:118660115-118660195 1.0000 80 chr21:26946387-26946467 1.0000 80 chr12:107133234-10713331 1.0000 80 chr9:5879688-5879768 1.0000 80 chr1:55645057-55645137 1.0000 80 chr6:6972872-6972952 1.0000 80 chr9:71795777-71795857 1.0000 80 chr3:43564513-43564593 1.0000 80 chr2:12317267-12317347 1.0000 80 chr4:55451914-55451994 1.0000 80 chr9:124049437-124049517 1.0000 80 chr9:97699918-97699998 1.0000 80 chr6:135613075-135613155 1.0000 80 chr14:50788071-50788151 1.0000 80 chr18:20248072-20248152 1.0000 80 chr3:25645820-25645900 1.0000 80 chr17:78765930-78766010 1.0000 80 chr3:196001640-196001720 1.0000 80 chr1:32166815-32166895 1.0000 80 chr13:114147788-11414786 1.0000 80 chr3:5809093-5809173 1.0000 80 chr21:15937653-15937733 1.0000 80 chr9:37953832-37953912 1.0000 80 chr1:85098772-85098852 1.0000 80 chr5:172882452-172882532 1.0000 80 chr8:8864266-8864346 1.0000 80 chr9:37200788-37200868 1.0000 80 chr9:125164798-125164878 1.0000 80 chr7:102632249-102632329 1.0000 80 chr1:68166594-68166674 1.0000 80 chr6:3177105-3177185 1.0000 80 chr2:190075079-190075159 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_JUN/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/JUN.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.279 C 0.218 G 0.221 T 0.283 Background letter frequencies (from file dataset with add-one prior applied): A 0.279 C 0.218 G 0.221 T 0.283 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ATGASTCA MEME-1 width = 8 sites = 204 llr = 1859 E-value = 9.9e-353 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 6::a:::a pos.-specific C 1:::5:a: probability G 3:a:5::: matrix T :a:::a:: bits 2.2 * 2.0 * * 1.8 *** *** 1.5 *** *** Relative 1.3 *** *** Entropy 1.1 ******* (13.1 bits) 0.9 ******* 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATGACTCA consensus G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:125164798-125164878 40 1.83e-05 TCCTCTCCCC ATGACTCA CTTTTTCCAC chr21:15937653-15937733 30 1.83e-05 AATATCTTCA ATGACTCA TCCTCTATTG chr3:25645820-25645900 33 1.83e-05 GAGAAGCTGC ATGACTCA CATAGAAAAA chr6:135613075-135613155 21 1.83e-05 tggagaatgg atgactca tctaaaggag chr9:97699918-97699998 32 1.83e-05 ccatatcatt atgactca tcattatgac chr6:6972872-6972952 10 1.83e-05 ctcgacagg atgactca taaaccttta chr1:55645057-55645137 47 1.83e-05 ctatctgtag atgactca tacatttcta chr9:5879688-5879768 9 1.83e-05 GCTCAGGG ATGACTCA CTGGAAGGAA chr12:107133234-10713331 56 1.83e-05 ATAATGAGTT ATGACTCA CTAGGAAAAC chr5:32537697-32537777 40 1.83e-05 agatagTGGG ATGACTCA CAGTGATGCT chr5:112214568-112214648 70 1.83e-05 CAAAACTTGG ATGACTCA TGT chr17:33760732-33760812 42 1.83e-05 ACAGGCCACG ATGACTCA TCACAGGGGA chr2:74079350-74079430 31 1.83e-05 atagaggatg atgactca gagtcaatgg chr14:34966227-34966307 51 1.83e-05 AGCAACCCCG ATGACTCA TCTCTGAGTT chr7:92262816-92262896 52 1.83e-05 ACAACTGTGG ATGACTCA TCAGAGGAAG chr2:69997518-69997598 51 1.83e-05 AAAATAGTGA ATGACTCA CTCACATGTG chr6:119468618-119468698 38 1.83e-05 CATAGCAGGG ATGACTCA GAGAtgatag chr15:67316844-67316924 45 1.83e-05 TGAGGGAAAG ATGACTCA TTCCCAGGCT chr22:22133425-22133505 24 1.83e-05 GTCTGTGTGA ATGACTCA CCCACATTCC chr10:72475745-72475825 52 1.83e-05 TGACTCATGC ATGACTCA AAGCTGTGGC chr2:173913688-173913768 27 1.83e-05 AACTCTcttt atgactca ttgctccatg chr15:96100957-96101037 41 1.83e-05 TGCTACCCAC ATGACTCA TCATAGTATT chr2:182675677-182675757 20 1.83e-05 TGAGTAAGCC ATGACTCA TAATCGGGAA chr1:212408108-212408188 27 1.83e-05 TATGGGGAGT ATGACTCA CCAGTATTGG chr6:42192381-42192461 35 1.83e-05 CATAAGGTTT ATGACTCA GTTTGAGTTT chr6:16345757-16345837 39 1.83e-05 AATTAGGGGT ATGACTCA CACTCGGTGA chr21:22572617-22572697 42 1.83e-05 CAGAAGTCGC ATGACTCA TATAGTCCGT chr1:114347503-114347583 57 1.83e-05 GATAAGAAAG ATGACTCA CAAGAGCATA chr5:55293684-55293764 24 1.83e-05 atccatgttc atgactca ttagcactct chr2:13105702-13105782 19 1.83e-05 AGCAGACTGC ATGACTCA TCTTTCCTAG chr3:11330929-11331009 39 1.83e-05 AACTCTGTCT ATGACTCA CTTCCCCCCA chrX:67791717-67791797 56 1.83e-05 AGTATATCTC ATGACTCA GAACTTACAT chr1:237068542-237068622 43 1.83e-05 actcataatg atgactca taagtgttgc chr5:174945014-174945094 6 1.83e-05 TCAGC ATGACTCA TCCATCCCCC chr2:112814128-112814208 31 1.83e-05 CTGGGGTCAG ATGACTCA TCCAGCACTG chr20:60663691-60663771 19 1.83e-05 agggcaatgc atgactca tgcttgtagt chr2:150990312-150990392 31 1.83e-05 ATGAGTCAGT ATGACTCA TTCGGCTTCC chr12:28119905-28119985 44 1.83e-05 TAGAGTTAAG ATGACTCA CCAGAAGGTC chr7:99160649-99160729 15 1.83e-05 ATTTGAAGGC ATGACTCA CTGTGAGTAC chr15:49238376-49238456 33 1.83e-05 CAGTTGGATG ATGACTCA CAGAGTTTCT chr5:88609773-88609853 24 1.83e-05 ACTTCCAGTT ATGACTCA TCCTAACCCT chr7:103556581-103556661 36 1.83e-05 ACATCAGCCA ATGACTCA TCTGGGCAGG chr1:211210518-211210598 27 1.83e-05 tggaggtgac atgactca ccctgagtca chr11:93885528-93885608 69 1.83e-05 aaatttaaaT ATGACTCA TGTC chr17:39010635-39010715 41 1.83e-05 GAGTAAGATA ATGACTCA CTGAGAAAGC chr1:168368401-168368481 39 1.83e-05 CAACCAGTGG ATGACTCA TCCAGGCTTT chr5:39167418-39167498 21 1.83e-05 CAAATAATAC ATGACTCA TTTCTGGAAG chr3:45085346-45085426 45 1.83e-05 AGACTAAATG ATGACTCA TCCGTCTGGT chr1:244486426-244486506 35 1.83e-05 TACCACAACT ATGACTCA GTCCTGACTC chr16:69511165-69511245 60 1.83e-05 CCTAAGAGGA ATGACTCA TGGGCAAGCA chr8:38895806-38895886 28 1.83e-05 tgtatctctc atgactca tttcctcact chr10:22919698-22919778 38 1.83e-05 AATTGCAGGG ATGACTCA CCATCTATCA chr15:50429616-50429696 42 1.83e-05 GTGCGTCATC ATGACTCA CAAGCGATCA chr6:34665858-34665938 35 1.83e-05 gagagcggaa atgactca ctcaagatta chr8:124161486-124161566 33 1.83e-05 CATTACTTTA ATGACTCA TTGAGCTAAA chr4:109908973-109909053 30 1.83e-05 GCAATCATTG ATGACTCA TCTCCATGAT chr12:102868400-10286848 57 1.83e-05 ACCTTTAAGA ATGACTCA TGCTCAGTTT chr3:65590651-65590731 37 1.83e-05 ATGCCTGAAA ATGACTCA TGCCATGAAA chr3:44397285-44397365 27 1.83e-05 AAAGATAATA ATGACTCA TACTCCTTTT chr5:56989053-56989133 33 1.83e-05 AGTTCAGCTG ATGACTCA CCAGGGGCCA chr1:25895551-25895631 40 1.83e-05 TCACCTCTGG ATGACTCA TGGAGGCTAC chr11:86304102-86304182 53 1.83e-05 TGCCAGGAAA ATGACTCA TTTCTGTATG chr1:52216051-52216131 42 1.83e-05 GCATGTTTGA ATGACTCA TCCCTTCCTT chr7:107661136-107661216 40 1.83e-05 ttatatccga atgactca caagcaaaag chr16:11709672-11709752 36 1.83e-05 atgactcaag atgactca gtgtgggggt chr2:190075079-190075159 21 3.68e-05 GCCGAGGAGA ATGAGTCA TATTTTCGTC chr7:102632249-102632329 33 3.68e-05 GACAGGAAGC ATGAGTCA GGAATAAGTG chr9:37953832-37953912 7 3.68e-05 CGGGTG ATGAGTCA GGACTTCTGA chr3:5809093-5809173 24 3.68e-05 aagtattggg atgagtca tattttcttt chr3:196001640-196001720 32 3.68e-05 GTGACACCCC ATGAGTCA TGGCCAACAT chr18:20248072-20248152 13 3.68e-05 TCAGTGAGCT ATGAGTCA TGCAGTGACT chr21:26946387-26946467 36 3.68e-05 ACAAAGAAGC ATGAGTCA CCCTGCTGGA chr10:17258341-17258421 18 3.68e-05 TGTTATGAGC ATGAGTCA CCAAAACTAC chr16:25644972-25645052 7 3.68e-05 GGAGCC ATGAGTCA TTTGCAGCCG chr9:6014845-6014925 54 3.68e-05 TCCTGGTAGC ATGAGTCA TTCACAGCCT chr11:65042800-65042880 31 3.68e-05 ATTCTTGTTG ATGAGTCa aaaaaaaaaa chr5:34924186-34924266 35 3.68e-05 CGGTTAGATG ATGAGTCA CACAGTGACT chr3:33984156-33984236 52 3.68e-05 TAGATAAGAG ATGAGTCA TATTTGGGGA chrX:30301700-30301780 40 3.68e-05 ATTCATTTGT ATGAGTCA TGTTTTCAGC chr12:1727845-1727925 56 3.68e-05 TCCAAGTAAG ATGAGTCA TCTGAGATCT chr11:129836365-12983644 7 3.68e-05 cttcga atgagtca tgtgcactgt chr17:42209784-42209864 18 3.68e-05 gtgctgttgg atgagtca tttgcccata chr1:222161393-222161473 25 3.68e-05 ATTCATGGGT ATGAGTCA CCATGACATC chr15:91379652-91379732 43 3.68e-05 TTGAAGCTGG ATGAGTCA TTGACACTCT chr2:159071093-159071173 28 3.68e-05 CCCTGATGAC ATGAGTCA TCAACTCTAA chr11:111913526-11191360 44 3.68e-05 TGAAAAAGCT ATGAGTCA TAGAGACCAC chr6:17715451-17715531 35 3.68e-05 TGCCCCTTCA ATGAGTCA GCAGTGACTC chr17:43398438-43398518 12 3.68e-05 AAAGTGGCTG ATGAGTCA TCTGAATGTG chr16:24474599-24474679 71 3.68e-05 gctgataaag atgagtca cc chr1:68316491-68316571 21 3.68e-05 AGTGAAGCAC ATGAGTCA TGAGAGGATG chr21:47608442-47608522 35 3.68e-05 TGTCAGGGTG ATGAGTCA TCTGGGACAG chr2:170526786-170526866 49 3.68e-05 CCACTGGGCT ATGAGTCA CACAAAGACT chr17:64344886-64344966 43 3.68e-05 AATCTAACAA ATGAGTCA TCCACATGTG chr2:65593879-65593959 32 3.68e-05 ATTGTACCGG ATGAGTCA TCCGAGGGTT chr11:86454582-86454662 59 3.68e-05 AGACCACACC ATGAGTCA GGCAAAAAAG chr1:179845503-179845583 35 3.68e-05 TAGTTCTTAA ATGAGTCA CGCAAGGTTG chr7:871488-871568 30 3.68e-05 AGAGGAAAGT ATGAGTCA TTCCAAATAA chr11:86451825-86451905 25 3.68e-05 CTGCAGTGCG ATGAGTCA TGGTGATGAA chr2:191199328-191199408 10 3.68e-05 TGGGAGGAA ATGAGTCA TTGATAACAT chr1:19330011-19330091 28 3.68e-05 TGTGATGCAA ATGAGTCA TCTTTGCTGC chr2:88565280-88565360 32 3.68e-05 TCACAGATGA ATGAGTCA CTTTCTGTTT chr10:93347942-93348022 35 3.68e-05 GCTACTTGGT ATGAGTCA TCTCCTGTCA chr3:196540955-196541035 35 3.68e-05 gtgcccttgg atgagtca cttcacctct chr3:118703731-118703811 55 3.68e-05 AAAAGGCAGG ATGAGTCA TGTGAGAAGA chr6:130499989-130500069 45 3.68e-05 CCAGGTATGC ATGAGTCA GAGGTGCCTT chr3:65016686-65016766 48 3.68e-05 agataaaacc atgagtca tctgagtata chr12:47672026-47672106 39 3.68e-05 TGAGTCATCC ATGAGTCA TTCCTTCATA chr5:40689694-40689774 68 3.68e-05 TTCATACACC ATGAGTCA TTCAT chr9:99102153-99102233 14 3.68e-05 TCCCGGAGGA ATGAGTCA CACACACACA chr2:88899786-88899866 66 3.68e-05 AAGCATAGGA ATGAGTCA CCCGATA chr14:23006006-23006086 13 3.68e-05 AGAAACAGGA ATGAGTCA GGCGTGAGTC chr6:40965391-40965471 21 3.68e-05 TTCCGGATCT ATGAGTCA GAGGGAAAAA chr6:111698947-111699027 50 3.68e-05 TCTCCTGAAG ATGAGTCA TCATCTTCAG chr4:72978385-72978465 44 3.68e-05 ATGTCTCACA ATGAGTCA TGTTGTGAGT chr7:44907051-44907131 24 3.68e-05 CACTGCTCTG ATGAGTCA CTTGCCTAAG chr4:77262347-77262427 12 3.68e-05 AGGCAAACTT ATGAGTCA TCAGTCATGA chr2:151024290-151024370 41 3.68e-05 CCACCAGGAG ATGAGTCA TACCAAGCAT chr12:76577447-76577527 45 3.68e-05 ATGTAACGAA ATGAGTCA GATCATCTCT chr6:3177105-3177185 67 5.13e-05 CATCACACTG GTGACTCA CAGGAA chr9:37200788-37200868 43 5.13e-05 CCCTTCCCCT GTGACTCA TACCTACTGT chr1:32166815-32166895 12 5.13e-05 GCAGCAATGG GTGACTCA CCCCTTGGCA chr17:78765930-78766010 28 5.13e-05 CGGATTCATC GTGACTCA TCCTGAGTCA chr9:124049437-124049517 46 5.13e-05 GGGCCTCTGG GTGACTCA GCCCTGAGTC chr4:55451914-55451994 30 5.13e-05 TAGGACTCCT GTGACTCA TTACTGTTGA chr2:173118027-173118107 39 5.13e-05 CAGGAAGTGG GTGACTCA TGGGGCCTTT chr12:6277131-6277211 16 5.13e-05 aatcatgggg gtgactca tctgaggtca chr14:102438878-10243895 37 5.13e-05 CCACACAGCG GTGACTCA TCTCTTGGAA chr8:54640442-54640522 26 5.13e-05 caatcttgat gtgactca ttcgccacca chr6:161650281-161650361 46 5.13e-05 TAAGCTCAGA GTGACTCA TACACCAGAA chr12:122203590-12220367 41 5.13e-05 CTAAATCCGA GTGACTCA TACTTGTGAC chr14:22802555-22802635 56 5.13e-05 TCACCACTTT GTGACTCA CCGATTAGTA chr10:21625946-21626026 72 5.13e-05 TTCCCACCCG GTGACTCA G chr13:50819367-50819447 67 5.13e-05 taaaccatgg gtgactca cttaac chr20:40325249-40325329 40 5.13e-05 CCAGGAATCA GTGACTCA TATCAGTCTC chr11:46096916-46096996 22 5.13e-05 TTCAGCAAAT GTGACTCA TTCATTGGCG chr1:224730649-224730729 20 5.13e-05 tgctaatgag gtgactca tgctaggcct chrX:119683954-119684034 12 5.13e-05 TCAGCTACCA GTGACTCA CATGGCACTC chr6:14744381-14744461 11 5.13e-05 GACTCACTTG GTGACTCA GTGCTTGTCA chr13:101045123-10104520 26 5.13e-05 AGAAGGTTGA GTGACTCA CCCagggaag chr2:102954617-102954697 45 5.13e-05 TCGTATGCCA GTGACTCA TCTGGAGTAA chr3:14307168-14307248 22 5.13e-05 aagctgaagg gtgactca tccagcatag chr13:29050434-29050514 49 5.13e-05 GTATGAAGCT GTGACTCA CTGCTGACTA chr12:76371817-76371897 14 5.13e-05 TGGCATCTGA GTGACTCA CCCAGAAAAC chr12:66049071-66049151 29 5.13e-05 AAGCAGGGAT GTGACTCA TCGTGGATGG chr6:133285464-133285544 10 5.13e-05 TTTACACTG GTGACTCA AAACAAACTT chr7:152406893-152406973 47 5.13e-05 ACAGACTAGT GTGACTCA GCCTGATGTC chr10:93661695-93661775 35 5.13e-05 actcatgcct gtgactca tgcctgaagg chr4:25175270-25175350 35 5.13e-05 TTAGTTGAGA GTGACTCA CCATGCCTCA chr8:8864266-8864346 27 6.59e-05 AAGGAAATGG GTGAGTCA CTCTTGAGTA chr1:85098772-85098852 22 6.59e-05 tatttaaagt gtgagtca tctttttact chr14:50788071-50788151 24 6.59e-05 TGAGTGGCAA GTGAGTCA TCAGCTTTAT chr2:12317267-12317347 25 6.59e-05 GTCTCCACTG GTGAGTCA TCTCCCGGCC chr3:152884147-152884227 52 6.59e-05 GTTAAAGGAA GTGAGTCA GGGAGGGCGG chr12:107370262-10737034 22 6.59e-05 ACAGCTGAAA GTGAGTCA GTTCTTTATC chr2:191269445-191269525 20 6.59e-05 ccagaaacct gtgagtca ttcttaacac chr1:41575406-41575486 43 6.59e-05 CAGCCACAGA GTGAGTCA TATTTCTTAT chr15:40559163-40559243 36 6.59e-05 tagagagagg gtgagtca cccccaggca chr16:8138110-8138190 60 6.59e-05 CATGTTGACT GTGAGTCA TAATGGTAAC chr5:142625754-142625834 41 6.59e-05 TTTGCACACA GTGAGTCA TCGTATCACA chrX:65370197-65370277 32 6.59e-05 AACATGCCAT GTGAGTCA TGTATTTTGG chr7:142661692-142661772 30 6.59e-05 CTACTCCATG GTGAGTCA TCACCAGCAC chr22:47330947-47331027 27 6.59e-05 GGTTTTCAGG GTGAGTCA TCTGTGTGTC chr2:28499122-28499202 52 6.59e-05 TTTTACAGAT GTGAGTCA TCCACTTTAG chr9:75764551-75764631 43 6.59e-05 AGCAAGAGTG GTGAGTCA TTTCTCTGGA chr17:32269599-32269679 27 6.59e-05 TTAATGAGTG GTGAGTCA TCTCTCAGTG chr10:11594259-11594339 59 6.59e-05 AGTCAGGATA GTGAGTCA TCCTTCAGTG chr10:3848163-3848243 26 6.59e-05 ATTCATCCGC GTGAGTCA TTGCCCTGCT chr6:134557256-134557336 39 6.59e-05 AAAATAGACT GTGAGTCA GTTATGAAGG chr4:87932956-87933036 26 6.59e-05 TGAAGGAGCG GTGAGTCA TTTTTTAAAG chr3:44277563-44277643 31 6.59e-05 AGGAAAGAGG GTGAGTCA TCGTTGGCGG chr1:234881624-234881704 71 6.59e-05 CTGAAGAGGA GTGAGTCA TC chr7:37071680-37071760 7 6.59e-05 GCCTGC GTGAGTCA TTGGAGAAAC chr1:52035581-52035661 47 6.59e-05 tcataaggag gtgagtca cctgcctagg chr8:102464061-102464141 15 6.59e-05 TGAGTTAAGA GTGAGTCA GAGAGACATT chr11:44782527-44782607 46 6.59e-05 acaacagcct gtgagtca tcagctgttg chr10:65467217-65467297 38 6.59e-05 CCAGAAAGAT GTGAGTCA GTTTAGTCCT chr5:77826334-77826414 68 6.59e-05 ATAAGGCCTT GTGAGTCA GTGGT chr22:30303866-30303946 37 8.02e-05 AGTCCAGCAG CTGACTCA CCAAGGAGTA chr6:111587225-111587305 43 8.02e-05 TCATCTGATG CTGACTCA GAAGCTCTGT chr19:55670381-55670461 69 8.02e-05 GTTTTGGAGT CTGACTCA CAGT chr11:35052396-35052476 53 8.02e-05 CCCATGAGCT CTGACTCA TCAGGCTTCT chr5:140900862-140900942 69 8.02e-05 AAACCACAAG CTGACTCA ATCA chr9:71795777-71795857 56 9.47e-05 CCTCCCTGGT CTGAGTCA TCTTGGTAAC chr5:118660115-118660195 33 9.47e-05 CCAGTCACTG CTGAGTCA CAGGGATAAG chr10:64996294-64996374 30 9.47e-05 GTTTAACCTA CTGAGTCA CCTGCTTACA chr14:31500924-31501004 38 9.47e-05 TAAACTGTGG CTGAGTCA TTTCCTCTCT chr2:196478768-196478848 20 9.47e-05 ATGAGCTGCT CTGAGTCA TCCACACTTT chr11:96095105-96095185 58 9.47e-05 AAATATGAGA CTGAGTCA GTTCAGTTAT chr1:147323476-147323556 15 9.47e-05 actctggtct ctgagtca tctttccttt chr1:52127010-52127090 48 1.42e-04 CATCAGAATG ATGATTCA TGTCTGAAGT chr2:170046840-170046920 41 1.42e-04 TCATCAGAGG ATGAATCA CCCACAGAGT chr4:122749149-122749229 36 1.42e-04 TGACTGGTTC ATGAATCA TGACTGATGT chr2:23980708-23980788 33 1.42e-04 ATGTCACAGG ATGATTCA TCATTGGTCA chr1:90441311-90441391 35 1.42e-04 GAAGAAGTCG ATGAATCA TTCTCCTCTA chr13:114147788-11414786 35 1.65e-04 ATGGCTAGGC ATGACTAA GTGATTGCCT chr15:41782689-41782769 45 1.65e-04 TATTCCTGGC ATGACTAA GAGGACGGAA chr17:76733601-76733681 10 1.65e-04 CCCAAGAGC ATGACTAA GAGATCGTAA chr12:76328377-76328457 28 2.07e-04 GATAATGTCA ATGAGTAA TTTCAGTTCT chr4:187751125-187751205 57 2.07e-04 ttcttctctg ttgactca ttccttatca chr6:11918895-11918975 55 2.78e-04 GGTCACCCAG AGGACTCA GTCTCTCCCC chr1:145042873-145042953 28 2.78e-04 AATCCTTGTG TTGAGTCA CTGTATTAGT chrX:21945098-21945178 46 2.92e-04 actctgtgaa aggagtca tgaatgctgt chr11:3887164-3887244 48 3.81e-04 AAATCCGGAA ATGAGCCA ACAGCACTTA chr20:30287130-30287210 20 4.40e-04 GAAGCAGCAG CTGATTCA GCTAGATGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:125164798-125164878 1.8e-05 39_[+1]_33 chr21:15937653-15937733 1.8e-05 29_[+1]_43 chr3:25645820-25645900 1.8e-05 32_[+1]_40 chr6:135613075-135613155 1.8e-05 20_[+1]_52 chr9:97699918-97699998 1.8e-05 31_[+1]_41 chr6:6972872-6972952 1.8e-05 9_[+1]_63 chr1:55645057-55645137 1.8e-05 46_[+1]_26 chr9:5879688-5879768 1.8e-05 8_[+1]_64 chr12:107133234-10713331 1.8e-05 55_[+1]_17 chr5:32537697-32537777 1.8e-05 39_[+1]_33 chr5:112214568-112214648 1.8e-05 69_[+1]_3 chr17:33760732-33760812 1.8e-05 41_[+1]_31 chr2:74079350-74079430 1.8e-05 30_[+1]_42 chr14:34966227-34966307 1.8e-05 50_[+1]_22 chr7:92262816-92262896 1.8e-05 51_[+1]_21 chr2:69997518-69997598 1.8e-05 50_[+1]_22 chr6:119468618-119468698 1.8e-05 37_[+1]_35 chr15:67316844-67316924 1.8e-05 44_[+1]_28 chr22:22133425-22133505 1.8e-05 23_[+1]_49 chr10:72475745-72475825 1.8e-05 51_[+1]_21 chr2:173913688-173913768 1.8e-05 26_[+1]_46 chr15:96100957-96101037 1.8e-05 40_[+1]_32 chr2:182675677-182675757 1.8e-05 19_[+1]_53 chr1:212408108-212408188 1.8e-05 26_[+1]_46 chr6:42192381-42192461 1.8e-05 34_[+1]_38 chr6:16345757-16345837 1.8e-05 38_[+1]_34 chr21:22572617-22572697 1.8e-05 41_[+1]_31 chr1:114347503-114347583 1.8e-05 56_[+1]_16 chr5:55293684-55293764 1.8e-05 23_[+1]_49 chr2:13105702-13105782 1.8e-05 18_[+1]_54 chr3:11330929-11331009 1.8e-05 38_[+1]_34 chrX:67791717-67791797 1.8e-05 55_[+1]_17 chr1:237068542-237068622 1.8e-05 42_[+1]_30 chr5:174945014-174945094 1.8e-05 5_[+1]_67 chr2:112814128-112814208 1.8e-05 30_[+1]_42 chr20:60663691-60663771 1.8e-05 18_[+1]_54 chr2:150990312-150990392 1.8e-05 30_[+1]_42 chr12:28119905-28119985 1.8e-05 43_[+1]_29 chr7:99160649-99160729 1.8e-05 14_[+1]_58 chr15:49238376-49238456 1.8e-05 32_[+1]_40 chr5:88609773-88609853 1.8e-05 23_[+1]_49 chr7:103556581-103556661 1.8e-05 35_[+1]_37 chr1:211210518-211210598 1.8e-05 26_[+1]_46 chr11:93885528-93885608 1.8e-05 68_[+1]_4 chr17:39010635-39010715 1.8e-05 40_[+1]_32 chr1:168368401-168368481 1.8e-05 38_[+1]_34 chr5:39167418-39167498 1.8e-05 20_[+1]_52 chr3:45085346-45085426 1.8e-05 44_[+1]_28 chr1:244486426-244486506 1.8e-05 34_[+1]_38 chr16:69511165-69511245 1.8e-05 59_[+1]_13 chr8:38895806-38895886 1.8e-05 27_[+1]_45 chr10:22919698-22919778 1.8e-05 37_[+1]_35 chr15:50429616-50429696 1.8e-05 41_[+1]_31 chr6:34665858-34665938 1.8e-05 34_[+1]_38 chr8:124161486-124161566 1.8e-05 32_[+1]_40 chr4:109908973-109909053 1.8e-05 29_[+1]_43 chr12:102868400-10286848 1.8e-05 56_[+1]_16 chr3:65590651-65590731 1.8e-05 36_[+1]_36 chr3:44397285-44397365 1.8e-05 26_[+1]_46 chr5:56989053-56989133 1.8e-05 32_[+1]_40 chr1:25895551-25895631 1.8e-05 39_[+1]_33 chr11:86304102-86304182 1.8e-05 52_[+1]_20 chr1:52216051-52216131 1.8e-05 41_[+1]_31 chr7:107661136-107661216 1.8e-05 39_[+1]_33 chr16:11709672-11709752 1.8e-05 35_[+1]_37 chr2:190075079-190075159 3.7e-05 20_[+1]_52 chr7:102632249-102632329 3.7e-05 32_[+1]_40 chr9:37953832-37953912 3.7e-05 6_[+1]_66 chr3:5809093-5809173 3.7e-05 23_[+1]_49 chr3:196001640-196001720 3.7e-05 31_[+1]_41 chr18:20248072-20248152 3.7e-05 12_[+1]_60 chr21:26946387-26946467 3.7e-05 35_[+1]_37 chr10:17258341-17258421 3.7e-05 17_[+1]_55 chr16:25644972-25645052 3.7e-05 6_[+1]_66 chr9:6014845-6014925 3.7e-05 53_[+1]_19 chr11:65042800-65042880 3.7e-05 30_[+1]_42 chr5:34924186-34924266 3.7e-05 34_[+1]_38 chr3:33984156-33984236 3.7e-05 51_[+1]_21 chrX:30301700-30301780 3.7e-05 39_[+1]_33 chr12:1727845-1727925 3.7e-05 55_[+1]_17 chr11:129836365-12983644 3.7e-05 6_[+1]_66 chr17:42209784-42209864 3.7e-05 17_[+1]_55 chr1:222161393-222161473 3.7e-05 24_[+1]_48 chr15:91379652-91379732 3.7e-05 42_[+1]_30 chr2:159071093-159071173 3.7e-05 27_[+1]_45 chr11:111913526-11191360 3.7e-05 43_[+1]_29 chr6:17715451-17715531 3.7e-05 34_[+1]_38 chr17:43398438-43398518 3.7e-05 11_[+1]_61 chr16:24474599-24474679 3.7e-05 70_[+1]_2 chr1:68316491-68316571 3.7e-05 20_[+1]_52 chr21:47608442-47608522 3.7e-05 34_[+1]_38 chr2:170526786-170526866 3.7e-05 48_[+1]_24 chr17:64344886-64344966 3.7e-05 42_[+1]_30 chr2:65593879-65593959 3.7e-05 31_[+1]_41 chr11:86454582-86454662 3.7e-05 58_[+1]_14 chr1:179845503-179845583 3.7e-05 34_[+1]_38 chr7:871488-871568 3.7e-05 29_[+1]_43 chr11:86451825-86451905 3.7e-05 24_[+1]_48 chr2:191199328-191199408 3.7e-05 9_[+1]_63 chr1:19330011-19330091 3.7e-05 27_[+1]_45 chr2:88565280-88565360 3.7e-05 31_[+1]_41 chr10:93347942-93348022 3.7e-05 34_[+1]_38 chr3:196540955-196541035 3.7e-05 34_[+1]_38 chr3:118703731-118703811 3.7e-05 54_[+1]_18 chr6:130499989-130500069 3.7e-05 44_[+1]_28 chr3:65016686-65016766 3.7e-05 47_[+1]_25 chr12:47672026-47672106 3.7e-05 38_[+1]_34 chr5:40689694-40689774 3.7e-05 67_[+1]_5 chr9:99102153-99102233 3.7e-05 13_[+1]_59 chr2:88899786-88899866 3.7e-05 65_[+1]_7 chr14:23006006-23006086 3.7e-05 12_[+1]_60 chr6:40965391-40965471 3.7e-05 20_[+1]_52 chr6:111698947-111699027 3.7e-05 49_[+1]_23 chr4:72978385-72978465 3.7e-05 43_[+1]_29 chr7:44907051-44907131 3.7e-05 23_[+1]_49 chr4:77262347-77262427 3.7e-05 11_[+1]_61 chr2:151024290-151024370 3.7e-05 40_[+1]_32 chr12:76577447-76577527 3.7e-05 44_[+1]_28 chr6:3177105-3177185 5.1e-05 66_[+1]_6 chr9:37200788-37200868 5.1e-05 42_[+1]_30 chr1:32166815-32166895 5.1e-05 11_[+1]_61 chr17:78765930-78766010 5.1e-05 27_[+1]_45 chr9:124049437-124049517 5.1e-05 45_[+1]_27 chr4:55451914-55451994 5.1e-05 29_[+1]_43 chr2:173118027-173118107 5.1e-05 38_[+1]_34 chr12:6277131-6277211 5.1e-05 15_[+1]_57 chr14:102438878-10243895 5.1e-05 36_[+1]_36 chr8:54640442-54640522 5.1e-05 25_[+1]_47 chr6:161650281-161650361 5.1e-05 45_[+1]_27 chr12:122203590-12220367 5.1e-05 40_[+1]_32 chr14:22802555-22802635 5.1e-05 55_[+1]_17 chr10:21625946-21626026 5.1e-05 71_[+1]_1 chr13:50819367-50819447 5.1e-05 66_[+1]_6 chr20:40325249-40325329 5.1e-05 39_[+1]_33 chr11:46096916-46096996 5.1e-05 21_[+1]_51 chr1:224730649-224730729 5.1e-05 19_[+1]_53 chrX:119683954-119684034 5.1e-05 11_[+1]_61 chr6:14744381-14744461 5.1e-05 10_[+1]_62 chr13:101045123-10104520 5.1e-05 25_[+1]_47 chr2:102954617-102954697 5.1e-05 44_[+1]_28 chr3:14307168-14307248 5.1e-05 21_[+1]_51 chr13:29050434-29050514 5.1e-05 48_[+1]_24 chr12:76371817-76371897 5.1e-05 13_[+1]_59 chr12:66049071-66049151 5.1e-05 28_[+1]_44 chr6:133285464-133285544 5.1e-05 9_[+1]_63 chr7:152406893-152406973 5.1e-05 46_[+1]_26 chr10:93661695-93661775 5.1e-05 34_[+1]_38 chr4:25175270-25175350 5.1e-05 34_[+1]_38 chr8:8864266-8864346 6.6e-05 26_[+1]_46 chr1:85098772-85098852 6.6e-05 21_[+1]_51 chr14:50788071-50788151 6.6e-05 23_[+1]_49 chr2:12317267-12317347 6.6e-05 24_[+1]_48 chr3:152884147-152884227 6.6e-05 51_[+1]_21 chr12:107370262-10737034 6.6e-05 21_[+1]_51 chr2:191269445-191269525 6.6e-05 19_[+1]_53 chr1:41575406-41575486 6.6e-05 42_[+1]_30 chr15:40559163-40559243 6.6e-05 35_[+1]_37 chr16:8138110-8138190 6.6e-05 59_[+1]_13 chr5:142625754-142625834 6.6e-05 40_[+1]_32 chrX:65370197-65370277 6.6e-05 31_[+1]_41 chr7:142661692-142661772 6.6e-05 29_[+1]_43 chr22:47330947-47331027 6.6e-05 26_[+1]_46 chr2:28499122-28499202 6.6e-05 51_[+1]_21 chr9:75764551-75764631 6.6e-05 42_[+1]_30 chr17:32269599-32269679 6.6e-05 26_[+1]_46 chr10:11594259-11594339 6.6e-05 58_[+1]_14 chr10:3848163-3848243 6.6e-05 25_[+1]_47 chr6:134557256-134557336 6.6e-05 38_[+1]_34 chr4:87932956-87933036 6.6e-05 25_[+1]_47 chr3:44277563-44277643 6.6e-05 30_[+1]_42 chr1:234881624-234881704 6.6e-05 70_[+1]_2 chr7:37071680-37071760 6.6e-05 6_[+1]_66 chr1:52035581-52035661 6.6e-05 46_[+1]_26 chr8:102464061-102464141 6.6e-05 14_[+1]_58 chr11:44782527-44782607 6.6e-05 45_[+1]_27 chr10:65467217-65467297 6.6e-05 37_[+1]_35 chr5:77826334-77826414 6.6e-05 67_[+1]_5 chr22:30303866-30303946 8e-05 36_[+1]_36 chr6:111587225-111587305 8e-05 42_[+1]_30 chr19:55670381-55670461 8e-05 68_[+1]_4 chr11:35052396-35052476 8e-05 52_[+1]_20 chr5:140900862-140900942 8e-05 68_[+1]_4 chr9:71795777-71795857 9.5e-05 55_[+1]_17 chr5:118660115-118660195 9.5e-05 32_[+1]_40 chr10:64996294-64996374 9.5e-05 29_[+1]_43 chr14:31500924-31501004 9.5e-05 37_[+1]_35 chr2:196478768-196478848 9.5e-05 19_[+1]_53 chr11:96095105-96095185 9.5e-05 57_[+1]_15 chr1:147323476-147323556 9.5e-05 14_[+1]_58 chr1:52127010-52127090 0.00014 47_[+1]_25 chr2:170046840-170046920 0.00014 40_[+1]_32 chr4:122749149-122749229 0.00014 35_[+1]_37 chr2:23980708-23980788 0.00014 32_[+1]_40 chr1:90441311-90441391 0.00014 34_[+1]_38 chr13:114147788-11414786 0.00017 34_[+1]_38 chr15:41782689-41782769 0.00017 44_[+1]_28 chr17:76733601-76733681 0.00017 9_[+1]_63 chr12:76328377-76328457 0.00021 27_[+1]_45 chr4:187751125-187751205 0.00021 56_[+1]_16 chr6:11918895-11918975 0.00028 54_[+1]_18 chr1:145042873-145042953 0.00028 27_[+1]_45 chrX:21945098-21945178 0.00029 45_[+1]_27 chr11:3887164-3887244 0.00038 47_[+1]_25 chr20:30287130-30287210 0.00044 19_[+1]_53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGASTCA width=8 seqs=204 chr9:125164798-125164878 ( 40) ATGACTCA 1 chr21:15937653-15937733 ( 30) ATGACTCA 1 chr3:25645820-25645900 ( 33) ATGACTCA 1 chr6:135613075-135613155 ( 21) ATGACTCA 1 chr9:97699918-97699998 ( 32) ATGACTCA 1 chr6:6972872-6972952 ( 10) ATGACTCA 1 chr1:55645057-55645137 ( 47) ATGACTCA 1 chr9:5879688-5879768 ( 9) ATGACTCA 1 chr12:107133234-10713331 ( 56) ATGACTCA 1 chr5:32537697-32537777 ( 40) ATGACTCA 1 chr5:112214568-112214648 ( 70) ATGACTCA 1 chr17:33760732-33760812 ( 42) ATGACTCA 1 chr2:74079350-74079430 ( 31) ATGACTCA 1 chr14:34966227-34966307 ( 51) ATGACTCA 1 chr7:92262816-92262896 ( 52) ATGACTCA 1 chr2:69997518-69997598 ( 51) ATGACTCA 1 chr6:119468618-119468698 ( 38) ATGACTCA 1 chr15:67316844-67316924 ( 45) ATGACTCA 1 chr22:22133425-22133505 ( 24) ATGACTCA 1 chr10:72475745-72475825 ( 52) ATGACTCA 1 chr2:173913688-173913768 ( 27) ATGACTCA 1 chr15:96100957-96101037 ( 41) ATGACTCA 1 chr2:182675677-182675757 ( 20) ATGACTCA 1 chr1:212408108-212408188 ( 27) ATGACTCA 1 chr6:42192381-42192461 ( 35) ATGACTCA 1 chr6:16345757-16345837 ( 39) ATGACTCA 1 chr21:22572617-22572697 ( 42) ATGACTCA 1 chr1:114347503-114347583 ( 57) ATGACTCA 1 chr5:55293684-55293764 ( 24) ATGACTCA 1 chr2:13105702-13105782 ( 19) ATGACTCA 1 chr3:11330929-11331009 ( 39) ATGACTCA 1 chrX:67791717-67791797 ( 56) ATGACTCA 1 chr1:237068542-237068622 ( 43) ATGACTCA 1 chr5:174945014-174945094 ( 6) ATGACTCA 1 chr2:112814128-112814208 ( 31) ATGACTCA 1 chr20:60663691-60663771 ( 19) ATGACTCA 1 chr2:150990312-150990392 ( 31) ATGACTCA 1 chr12:28119905-28119985 ( 44) ATGACTCA 1 chr7:99160649-99160729 ( 15) ATGACTCA 1 chr15:49238376-49238456 ( 33) ATGACTCA 1 chr5:88609773-88609853 ( 24) ATGACTCA 1 chr7:103556581-103556661 ( 36) ATGACTCA 1 chr1:211210518-211210598 ( 27) ATGACTCA 1 chr11:93885528-93885608 ( 69) ATGACTCA 1 chr17:39010635-39010715 ( 41) ATGACTCA 1 chr1:168368401-168368481 ( 39) ATGACTCA 1 chr5:39167418-39167498 ( 21) ATGACTCA 1 chr3:45085346-45085426 ( 45) ATGACTCA 1 chr1:244486426-244486506 ( 35) ATGACTCA 1 chr16:69511165-69511245 ( 60) ATGACTCA 1 chr8:38895806-38895886 ( 28) ATGACTCA 1 chr10:22919698-22919778 ( 38) ATGACTCA 1 chr15:50429616-50429696 ( 42) ATGACTCA 1 chr6:34665858-34665938 ( 35) ATGACTCA 1 chr8:124161486-124161566 ( 33) ATGACTCA 1 chr4:109908973-109909053 ( 30) ATGACTCA 1 chr12:102868400-10286848 ( 57) ATGACTCA 1 chr3:65590651-65590731 ( 37) ATGACTCA 1 chr3:44397285-44397365 ( 27) ATGACTCA 1 chr5:56989053-56989133 ( 33) ATGACTCA 1 chr1:25895551-25895631 ( 40) ATGACTCA 1 chr11:86304102-86304182 ( 53) ATGACTCA 1 chr1:52216051-52216131 ( 42) ATGACTCA 1 chr7:107661136-107661216 ( 40) ATGACTCA 1 chr16:11709672-11709752 ( 36) ATGACTCA 1 chr2:190075079-190075159 ( 21) ATGAGTCA 1 chr7:102632249-102632329 ( 33) ATGAGTCA 1 chr9:37953832-37953912 ( 7) ATGAGTCA 1 chr3:5809093-5809173 ( 24) ATGAGTCA 1 chr3:196001640-196001720 ( 32) ATGAGTCA 1 chr18:20248072-20248152 ( 13) ATGAGTCA 1 chr21:26946387-26946467 ( 36) ATGAGTCA 1 chr10:17258341-17258421 ( 18) ATGAGTCA 1 chr16:25644972-25645052 ( 7) ATGAGTCA 1 chr9:6014845-6014925 ( 54) ATGAGTCA 1 chr11:65042800-65042880 ( 31) ATGAGTCA 1 chr5:34924186-34924266 ( 35) ATGAGTCA 1 chr3:33984156-33984236 ( 52) ATGAGTCA 1 chrX:30301700-30301780 ( 40) ATGAGTCA 1 chr12:1727845-1727925 ( 56) ATGAGTCA 1 chr11:129836365-12983644 ( 7) ATGAGTCA 1 chr17:42209784-42209864 ( 18) ATGAGTCA 1 chr1:222161393-222161473 ( 25) ATGAGTCA 1 chr15:91379652-91379732 ( 43) ATGAGTCA 1 chr2:159071093-159071173 ( 28) ATGAGTCA 1 chr11:111913526-11191360 ( 44) ATGAGTCA 1 chr6:17715451-17715531 ( 35) ATGAGTCA 1 chr17:43398438-43398518 ( 12) ATGAGTCA 1 chr16:24474599-24474679 ( 71) ATGAGTCA 1 chr1:68316491-68316571 ( 21) ATGAGTCA 1 chr21:47608442-47608522 ( 35) ATGAGTCA 1 chr2:170526786-170526866 ( 49) ATGAGTCA 1 chr17:64344886-64344966 ( 43) ATGAGTCA 1 chr2:65593879-65593959 ( 32) ATGAGTCA 1 chr11:86454582-86454662 ( 59) ATGAGTCA 1 chr1:179845503-179845583 ( 35) ATGAGTCA 1 chr7:871488-871568 ( 30) ATGAGTCA 1 chr11:86451825-86451905 ( 25) ATGAGTCA 1 chr2:191199328-191199408 ( 10) ATGAGTCA 1 chr1:19330011-19330091 ( 28) ATGAGTCA 1 chr2:88565280-88565360 ( 32) ATGAGTCA 1 chr10:93347942-93348022 ( 35) ATGAGTCA 1 chr3:196540955-196541035 ( 35) ATGAGTCA 1 chr3:118703731-118703811 ( 55) ATGAGTCA 1 chr6:130499989-130500069 ( 45) ATGAGTCA 1 chr3:65016686-65016766 ( 48) ATGAGTCA 1 chr12:47672026-47672106 ( 39) ATGAGTCA 1 chr5:40689694-40689774 ( 68) ATGAGTCA 1 chr9:99102153-99102233 ( 14) ATGAGTCA 1 chr2:88899786-88899866 ( 66) ATGAGTCA 1 chr14:23006006-23006086 ( 13) ATGAGTCA 1 chr6:40965391-40965471 ( 21) ATGAGTCA 1 chr6:111698947-111699027 ( 50) ATGAGTCA 1 chr4:72978385-72978465 ( 44) ATGAGTCA 1 chr7:44907051-44907131 ( 24) ATGAGTCA 1 chr4:77262347-77262427 ( 12) ATGAGTCA 1 chr2:151024290-151024370 ( 41) ATGAGTCA 1 chr12:76577447-76577527 ( 45) ATGAGTCA 1 chr6:3177105-3177185 ( 67) GTGACTCA 1 chr9:37200788-37200868 ( 43) GTGACTCA 1 chr1:32166815-32166895 ( 12) GTGACTCA 1 chr17:78765930-78766010 ( 28) GTGACTCA 1 chr9:124049437-124049517 ( 46) GTGACTCA 1 chr4:55451914-55451994 ( 30) GTGACTCA 1 chr2:173118027-173118107 ( 39) GTGACTCA 1 chr12:6277131-6277211 ( 16) GTGACTCA 1 chr14:102438878-10243895 ( 37) GTGACTCA 1 chr8:54640442-54640522 ( 26) GTGACTCA 1 chr6:161650281-161650361 ( 46) GTGACTCA 1 chr12:122203590-12220367 ( 41) GTGACTCA 1 chr14:22802555-22802635 ( 56) GTGACTCA 1 chr10:21625946-21626026 ( 72) GTGACTCA 1 chr13:50819367-50819447 ( 67) GTGACTCA 1 chr20:40325249-40325329 ( 40) GTGACTCA 1 chr11:46096916-46096996 ( 22) GTGACTCA 1 chr1:224730649-224730729 ( 20) GTGACTCA 1 chrX:119683954-119684034 ( 12) GTGACTCA 1 chr6:14744381-14744461 ( 11) GTGACTCA 1 chr13:101045123-10104520 ( 26) GTGACTCA 1 chr2:102954617-102954697 ( 45) GTGACTCA 1 chr3:14307168-14307248 ( 22) GTGACTCA 1 chr13:29050434-29050514 ( 49) GTGACTCA 1 chr12:76371817-76371897 ( 14) GTGACTCA 1 chr12:66049071-66049151 ( 29) GTGACTCA 1 chr6:133285464-133285544 ( 10) GTGACTCA 1 chr7:152406893-152406973 ( 47) GTGACTCA 1 chr10:93661695-93661775 ( 35) GTGACTCA 1 chr4:25175270-25175350 ( 35) GTGACTCA 1 chr8:8864266-8864346 ( 27) GTGAGTCA 1 chr1:85098772-85098852 ( 22) GTGAGTCA 1 chr14:50788071-50788151 ( 24) GTGAGTCA 1 chr2:12317267-12317347 ( 25) GTGAGTCA 1 chr3:152884147-152884227 ( 52) GTGAGTCA 1 chr12:107370262-10737034 ( 22) GTGAGTCA 1 chr2:191269445-191269525 ( 20) GTGAGTCA 1 chr1:41575406-41575486 ( 43) GTGAGTCA 1 chr15:40559163-40559243 ( 36) GTGAGTCA 1 chr16:8138110-8138190 ( 60) GTGAGTCA 1 chr5:142625754-142625834 ( 41) GTGAGTCA 1 chrX:65370197-65370277 ( 32) GTGAGTCA 1 chr7:142661692-142661772 ( 30) GTGAGTCA 1 chr22:47330947-47331027 ( 27) GTGAGTCA 1 chr2:28499122-28499202 ( 52) GTGAGTCA 1 chr9:75764551-75764631 ( 43) GTGAGTCA 1 chr17:32269599-32269679 ( 27) GTGAGTCA 1 chr10:11594259-11594339 ( 59) GTGAGTCA 1 chr10:3848163-3848243 ( 26) GTGAGTCA 1 chr6:134557256-134557336 ( 39) GTGAGTCA 1 chr4:87932956-87933036 ( 26) GTGAGTCA 1 chr3:44277563-44277643 ( 31) GTGAGTCA 1 chr1:234881624-234881704 ( 71) GTGAGTCA 1 chr7:37071680-37071760 ( 7) GTGAGTCA 1 chr1:52035581-52035661 ( 47) GTGAGTCA 1 chr8:102464061-102464141 ( 15) GTGAGTCA 1 chr11:44782527-44782607 ( 46) GTGAGTCA 1 chr10:65467217-65467297 ( 38) GTGAGTCA 1 chr5:77826334-77826414 ( 68) GTGAGTCA 1 chr22:30303866-30303946 ( 37) CTGACTCA 1 chr6:111587225-111587305 ( 43) CTGACTCA 1 chr19:55670381-55670461 ( 69) CTGACTCA 1 chr11:35052396-35052476 ( 53) CTGACTCA 1 chr5:140900862-140900942 ( 69) CTGACTCA 1 chr9:71795777-71795857 ( 56) CTGAGTCA 1 chr5:118660115-118660195 ( 33) CTGAGTCA 1 chr10:64996294-64996374 ( 30) CTGAGTCA 1 chr14:31500924-31501004 ( 38) CTGAGTCA 1 chr2:196478768-196478848 ( 20) CTGAGTCA 1 chr11:96095105-96095185 ( 58) CTGAGTCA 1 chr1:147323476-147323556 ( 15) CTGAGTCA 1 chr1:52127010-52127090 ( 48) ATGATTCA 1 chr2:170046840-170046920 ( 41) ATGAATCA 1 chr4:122749149-122749229 ( 36) ATGAATCA 1 chr2:23980708-23980788 ( 33) ATGATTCA 1 chr1:90441311-90441391 ( 35) ATGAATCA 1 chr13:114147788-11414786 ( 35) ATGACTAA 1 chr15:41782689-41782769 ( 45) ATGACTAA 1 chr17:76733601-76733681 ( 10) ATGACTAA 1 chr12:76328377-76328457 ( 28) ATGAGTAA 1 chr4:187751125-187751205 ( 57) TTGACTCA 1 chr6:11918895-11918975 ( 55) AGGACTCA 1 chr1:145042873-145042953 ( 28) TTGAGTCA 1 chrX:21945098-21945178 ( 46) AGGAGTCA 1 chr11:3887164-3887244 ( 48) ATGAGCCA 1 chr20:30287130-30287210 ( 20) CTGATTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.62476 E= 9.9e-353 119 -177 39 -485 -1432 -1432 -449 181 -1432 -1432 218 -1432 184 -1432 -1432 -1432 -424 124 105 -426 -1432 -547 -1432 182 -383 217 -1432 -1432 184 -1432 -1432 -1432 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 204 E= 9.9e-353 0.637255 0.063725 0.289216 0.009804 0.000000 0.000000 0.009804 0.990196 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.014706 0.514706 0.455882 0.014706 0.000000 0.004902 0.000000 0.995098 0.019608 0.980392 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGASTCA MEME-1 regular expression -------------------------------------------------------------------------------- [AG]TGA[CG]TCA -------------------------------------------------------------------------------- Time 4.60 secs. ******************************************************************************** ******************************************************************************** MOTIF TGASTCAT MEME-2 width = 8 sites = 68 llr = 562 E-value = 1.9e-036 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::81::a: pos.-specific C ::14:a:2 probability G :a:5:::2 matrix T a:11a::6 bits 2.2 * 2.0 * * 1.8 ** *** 1.5 ** *** Relative 1.3 ** *** Entropy 1.1 *** *** (11.9 bits) 0.9 *** *** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGAGTCAT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:102632249-102632329 61 1.88e-05 GTGCGCAGTG TGAGTCAT GCCTGTAAGA chr17:78765930-78766010 39 1.88e-05 TGACTCATCC TGAGTCAT CCAGGCAGTA chr10:64996294-64996374 7 1.88e-05 CACAGT TGAGTCAT CATGAGTTTA chr6:119468618-119468698 23 1.88e-05 GATCCTTGCT TGAGTCAT AGCAGGGATG chr15:96100957-96101037 7 1.88e-05 GGAAAG TGAGTCAT CTCTTTTCCC chr6:42192381-42192461 20 1.88e-05 AATCACAGTT TGAGTCAT AAGGTTTATG chr1:211210518-211210598 38 1.88e-05 tgactcaccc tgagtcat gcaaggggtg chr17:39010635-39010715 1 1.88e-05 . TGAGTCAT CTCAAGTTGA chr12:47672026-47672106 29 1.88e-05 CTACAGACCA TGAGTCAT CCATGAGTCA chr14:23006006-23006086 72 1.88e-05 GGAGTGACTC TGAGTCAT G chr1:52035581-52035661 33 1.88e-05 atcaggaggc tgagtcat aaggaggtga chr4:72978385-72978465 17 1.88e-05 ATGACACTTG TGAGTCAT ATGTCTCATA chr5:56989053-56989133 59 1.88e-05 CAGGCAAGCA TGAGTCAT TCCACATTGC chr5:140900862-140900942 49 1.88e-05 GAGATAAAGT TGAGTCAT TAAAACCACA chr1:147323476-147323556 61 1.88e-05 tgtttgcagc tgagtcat tttaatcagt chr9:37953832-37953912 22 3.73e-05 TCAGGACTTC TGACTCAT CTTGGGGAGT chr18:20248072-20248152 26 3.73e-05 AGTCATGCAG TGACTCAT AGCATCATCA chr5:34924186-34924266 48 3.73e-05 AGTCACACAG TGACTCAT TCAGGAGAAA chr12:122203590-12220367 55 3.73e-05 CTCATACTTG TGACTCAT CTTCCACATC chr10:72475745-72475825 42 3.73e-05 CCTTGACCTC TGACTCAT GCATGACTCA chr6:17715451-17715531 47 3.73e-05 GAGTCAGCAG TGACTCAT AAGCACTTCC chr20:60663691-60663771 60 3.73e-05 acaaacctac tgactcat gtttgtggtg chr10:93661695-93661775 23 3.73e-05 ttgaacactg tgactcat gcctgtgact chr9:124049437-124049517 58 6.65e-05 GACTCAGCCC TGAGTCAC CGGGAGGCTG chr16:25644972-25645052 42 6.65e-05 GAGGTGGCTA TGAGTCAC CAGGAGCCAT chr2:173118027-173118107 69 6.65e-05 GACAGACCCT TGAGTcac acac chr15:40559163-40559243 64 6.65e-05 tgatggagag tgagtcag agAAGGAAG chrX:67791717-67791797 73 6.65e-05 AGAACTTACA TGAGTCAC chr2:150990312-150990392 22 6.65e-05 TATGAAAGTA TGAGTCAG TATGACTCAT chr7:99160649-99160729 40 6.65e-05 TACATTTCAG TGAGTCAC CCAGAATGGT chr11:86454582-86454662 19 6.65e-05 CTGTGAAAAC TGAGTCAC AGGTTGGTGA chr10:11594259-11594339 47 6.65e-05 CTTAAACAAG TGAGTCAG GATAGTGAGT chr2:88565280-88565360 18 6.65e-05 TGAATGGGGA TGAGTCAC AGATGAATGA chr9:97699918-97699998 46 9.52e-05 ctcatcatta tgactcag cacagattgc chr9:5879688-5879768 53 9.52e-05 CCAGATAATC TGACTCAC ATGGTCAGCC chr2:74079350-74079430 49 9.52e-05 gagtcaatgg tgactcag agatttgggg chr14:22802555-22802635 42 9.52e-05 GAGGCTGTTC TGACTCAC CACTTTGTGA chr2:173913688-173913768 70 9.52e-05 cagcccttga tgactcag ttc chr13:50819367-50819447 45 9.52e-05 gtttcagctc tgactcac tgtgtaaacc chr13:101045123-10104520 67 9.52e-05 gaaggtcaag tgactcac ccaagg chr11:93885528-93885608 30 9.52e-05 ttatcagctg tgactcac cctgctgaga chr1:244486426-244486506 47 9.52e-05 GACTCAGTCC TGACTCAG AGCTTCCTGA chr8:38895806-38895886 45 9.52e-05 atttcctcac tgactcag tctgccagga chr5:40689694-40689774 20 9.52e-05 CGTTGTGAAC TGACTCAG CCTCAACTAA chr10:65467217-65467297 55 9.52e-05 AGTTTAGTCC TGACTCAG TTCCCAGTAT chr12:76577447-76577527 18 9.52e-05 AAGTGCCAGG TGACTCAG AGCTGCGTAA chr4:187751125-187751205 33 1.10e-04 tcctctctca tgcgtcat cagcttttct chr15:50429616-50429696 33 1.10e-04 AGCATCACTG TGCGTCAT CATGACTCAC chr2:65593879-65593959 72 1.29e-04 ATAGGCCTGT TGTGTCAT T chr11:35052396-35052476 7 1.29e-04 AGCTGA TGTGTCAT CTTATGAGTG chr11:44782527-44782607 71 1.29e-04 ttgttagccc tgtgtcat ag chr13:114147788-11414786 48 1.91e-04 ACTAAGTGAT TGCCTCAT TGTTTGTTTT chr9:6014845-6014925 34 1.91e-04 ATTCTAGCAC TGAATCAT CATCCTGGTA chr12:6277131-6277211 4 1.91e-04 aac tgaatcat gggggtgact chrX:30301700-30301780 28 1.91e-04 TGTGCCATGA TGATTCAT TTGTATGAGT chr1:222161393-222161473 13 1.91e-04 CTAAGATAAG TGATTCAT GGGTATGAGT chr4:122749149-122749229 19 1.91e-04 TGTTGTCAAC TGATTCAT GACTGGTTCA chr9:75764551-75764631 11 1.91e-04 GTGGAGCCGA TGAATCAT CATCTTCTAG chr10:3848163-3848243 14 1.91e-04 TAATTTAAAA TGATTCAT CCGCGTGAGT chr2:102954617-102954697 9 1.91e-04 TCACCAAC TGCCTCAT GTGTGGTGAC chr12:76371817-76371897 59 1.91e-04 AAAGAGGAAA TGAATCAT GGAAGCTTCT chr22:47330947-47331027 3 2.10e-04 AG TGTCTCAT CATGCAGGTT chr5:172882452-172882532 54 2.62e-04 cctaagacac tGTGTCAC ACAGAGATAG chrX:119683954-119684034 52 3.83e-04 CCACACTGAC TTAGTCAT TGAGTCAACA chr8:124161486-124161566 2 3.83e-04 A TTAGTCAT TGGTGATTAG chr4:25175270-25175350 46 3.83e-04 TGACTCACCA TGCCTCAG TGGTGACTGT chr1:145042873-145042953 41 3.83e-04 AGTCACTGTA TTAGTCAT CTTTTTGCTG chr17:33760732-33760812 3 4.12e-04 GG TGTCTCAG TACATAGCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:102632249-102632329 1.9e-05 60_[+2]_12 chr17:78765930-78766010 1.9e-05 38_[+2]_34 chr10:64996294-64996374 1.9e-05 6_[+2]_66 chr6:119468618-119468698 1.9e-05 22_[+2]_50 chr15:96100957-96101037 1.9e-05 6_[+2]_66 chr6:42192381-42192461 1.9e-05 19_[+2]_53 chr1:211210518-211210598 1.9e-05 37_[+2]_35 chr17:39010635-39010715 1.9e-05 [+2]_72 chr12:47672026-47672106 1.9e-05 28_[+2]_44 chr14:23006006-23006086 1.9e-05 71_[+2]_1 chr1:52035581-52035661 1.9e-05 32_[+2]_40 chr4:72978385-72978465 1.9e-05 16_[+2]_56 chr5:56989053-56989133 1.9e-05 58_[+2]_14 chr5:140900862-140900942 1.9e-05 48_[+2]_24 chr1:147323476-147323556 1.9e-05 60_[+2]_12 chr9:37953832-37953912 3.7e-05 21_[+2]_51 chr18:20248072-20248152 3.7e-05 25_[+2]_47 chr5:34924186-34924266 3.7e-05 47_[+2]_25 chr12:122203590-12220367 3.7e-05 54_[+2]_18 chr10:72475745-72475825 3.7e-05 41_[+2]_31 chr6:17715451-17715531 3.7e-05 46_[+2]_26 chr20:60663691-60663771 3.7e-05 59_[+2]_13 chr10:93661695-93661775 3.7e-05 22_[+2]_50 chr9:124049437-124049517 6.6e-05 57_[+2]_15 chr16:25644972-25645052 6.6e-05 41_[+2]_31 chr2:173118027-173118107 6.6e-05 68_[+2]_4 chr15:40559163-40559243 6.6e-05 63_[+2]_9 chrX:67791717-67791797 6.6e-05 72_[+2] chr2:150990312-150990392 6.6e-05 21_[+2]_51 chr7:99160649-99160729 6.6e-05 39_[+2]_33 chr11:86454582-86454662 6.6e-05 18_[+2]_54 chr10:11594259-11594339 6.6e-05 46_[+2]_26 chr2:88565280-88565360 6.6e-05 17_[+2]_55 chr9:97699918-97699998 9.5e-05 45_[+2]_27 chr9:5879688-5879768 9.5e-05 52_[+2]_20 chr2:74079350-74079430 9.5e-05 48_[+2]_24 chr14:22802555-22802635 9.5e-05 41_[+2]_31 chr2:173913688-173913768 9.5e-05 69_[+2]_3 chr13:50819367-50819447 9.5e-05 44_[+2]_28 chr13:101045123-10104520 9.5e-05 66_[+2]_6 chr11:93885528-93885608 9.5e-05 29_[+2]_43 chr1:244486426-244486506 9.5e-05 46_[+2]_26 chr8:38895806-38895886 9.5e-05 44_[+2]_28 chr5:40689694-40689774 9.5e-05 19_[+2]_53 chr10:65467217-65467297 9.5e-05 54_[+2]_18 chr12:76577447-76577527 9.5e-05 17_[+2]_55 chr4:187751125-187751205 0.00011 32_[+2]_40 chr15:50429616-50429696 0.00011 32_[+2]_40 chr2:65593879-65593959 0.00013 71_[+2]_1 chr11:35052396-35052476 0.00013 6_[+2]_66 chr11:44782527-44782607 0.00013 70_[+2]_2 chr13:114147788-11414786 0.00019 47_[+2]_25 chr9:6014845-6014925 0.00019 33_[+2]_39 chr12:6277131-6277211 0.00019 3_[+2]_69 chrX:30301700-30301780 0.00019 27_[+2]_45 chr1:222161393-222161473 0.00019 12_[+2]_60 chr4:122749149-122749229 0.00019 18_[+2]_54 chr9:75764551-75764631 0.00019 10_[+2]_62 chr10:3848163-3848243 0.00019 13_[+2]_59 chr2:102954617-102954697 0.00019 8_[+2]_64 chr12:76371817-76371897 0.00019 58_[+2]_14 chr22:47330947-47331027 0.00021 2_[+2]_70 chr5:172882452-172882532 0.00026 53_[+2]_19 chrX:119683954-119684034 0.00038 51_[+2]_21 chr8:124161486-124161566 0.00038 1_[+2]_71 chr4:25175270-25175350 0.00038 45_[+2]_27 chr1:145042873-145042953 0.00038 40_[+2]_32 chr17:33760732-33760812 0.00041 2_[+2]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGASTCAT width=8 seqs=68 chr7:102632249-102632329 ( 61) TGAGTCAT 1 chr17:78765930-78766010 ( 39) TGAGTCAT 1 chr10:64996294-64996374 ( 7) TGAGTCAT 1 chr6:119468618-119468698 ( 23) TGAGTCAT 1 chr15:96100957-96101037 ( 7) TGAGTCAT 1 chr6:42192381-42192461 ( 20) TGAGTCAT 1 chr1:211210518-211210598 ( 38) TGAGTCAT 1 chr17:39010635-39010715 ( 1) TGAGTCAT 1 chr12:47672026-47672106 ( 29) TGAGTCAT 1 chr14:23006006-23006086 ( 72) TGAGTCAT 1 chr1:52035581-52035661 ( 33) TGAGTCAT 1 chr4:72978385-72978465 ( 17) TGAGTCAT 1 chr5:56989053-56989133 ( 59) TGAGTCAT 1 chr5:140900862-140900942 ( 49) TGAGTCAT 1 chr1:147323476-147323556 ( 61) TGAGTCAT 1 chr9:37953832-37953912 ( 22) TGACTCAT 1 chr18:20248072-20248152 ( 26) TGACTCAT 1 chr5:34924186-34924266 ( 48) TGACTCAT 1 chr12:122203590-12220367 ( 55) TGACTCAT 1 chr10:72475745-72475825 ( 42) TGACTCAT 1 chr6:17715451-17715531 ( 47) TGACTCAT 1 chr20:60663691-60663771 ( 60) TGACTCAT 1 chr10:93661695-93661775 ( 23) TGACTCAT 1 chr9:124049437-124049517 ( 58) TGAGTCAC 1 chr16:25644972-25645052 ( 42) TGAGTCAC 1 chr2:173118027-173118107 ( 69) TGAGTCAC 1 chr15:40559163-40559243 ( 64) TGAGTCAG 1 chrX:67791717-67791797 ( 73) TGAGTCAC 1 chr2:150990312-150990392 ( 22) TGAGTCAG 1 chr7:99160649-99160729 ( 40) TGAGTCAC 1 chr11:86454582-86454662 ( 19) TGAGTCAC 1 chr10:11594259-11594339 ( 47) TGAGTCAG 1 chr2:88565280-88565360 ( 18) TGAGTCAC 1 chr9:97699918-97699998 ( 46) TGACTCAG 1 chr9:5879688-5879768 ( 53) TGACTCAC 1 chr2:74079350-74079430 ( 49) TGACTCAG 1 chr14:22802555-22802635 ( 42) TGACTCAC 1 chr2:173913688-173913768 ( 70) TGACTCAG 1 chr13:50819367-50819447 ( 45) TGACTCAC 1 chr13:101045123-10104520 ( 67) TGACTCAC 1 chr11:93885528-93885608 ( 30) TGACTCAC 1 chr1:244486426-244486506 ( 47) TGACTCAG 1 chr8:38895806-38895886 ( 45) TGACTCAG 1 chr5:40689694-40689774 ( 20) TGACTCAG 1 chr10:65467217-65467297 ( 55) TGACTCAG 1 chr12:76577447-76577527 ( 18) TGACTCAG 1 chr4:187751125-187751205 ( 33) TGCGTCAT 1 chr15:50429616-50429696 ( 33) TGCGTCAT 1 chr2:65593879-65593959 ( 72) TGTGTCAT 1 chr11:35052396-35052476 ( 7) TGTGTCAT 1 chr11:44782527-44782607 ( 71) TGTGTCAT 1 chr13:114147788-11414786 ( 48) TGCCTCAT 1 chr9:6014845-6014925 ( 34) TGAATCAT 1 chr12:6277131-6277211 ( 4) TGAATCAT 1 chrX:30301700-30301780 ( 28) TGATTCAT 1 chr1:222161393-222161473 ( 13) TGATTCAT 1 chr4:122749149-122749229 ( 19) TGATTCAT 1 chr9:75764551-75764631 ( 11) TGAATCAT 1 chr10:3848163-3848243 ( 14) TGATTCAT 1 chr2:102954617-102954697 ( 9) TGCCTCAT 1 chr12:76371817-76371897 ( 59) TGAATCAT 1 chr22:47330947-47331027 ( 3) TGTCTCAT 1 chr5:172882452-172882532 ( 54) TGTGTCAC 1 chrX:119683954-119684034 ( 52) TTAGTCAT 1 chr8:124161486-124161566 ( 2) TTAGTCAT 1 chr4:25175270-25175350 ( 46) TGCCTCAG 1 chr1:145042873-145042953 ( 41) TTAGTCAT 1 chr17:33760732-33760812 ( 3) TGTCTCAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.43105 E= 1.9e-036 -1273 -1273 -1273 182 -1273 -1273 212 -268 159 -157 -1273 -168 -224 81 118 -226 -1273 -1273 -1273 182 -1273 220 -1273 -1273 184 -1273 -1273 -1273 -1273 -19 -21 113 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 68 E= 1.9e-036 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.955882 0.044118 0.838235 0.073529 0.000000 0.088235 0.058824 0.382353 0.500000 0.058824 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.191176 0.191176 0.617647 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGASTCAT MEME-2 regular expression -------------------------------------------------------------------------------- TGA[GC]TCAT -------------------------------------------------------------------------------- Time 7.99 secs. ******************************************************************************** ******************************************************************************** MOTIF TGACVTCA MEME-3 width = 8 sites = 54 llr = 459 E-value = 1.5e-025 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a:4::9 pos.-specific C :::52:a: probability G :a:24::: matrix T a::2:a:1 bits 2.2 * * 2.0 * * 1.8 *** ** 1.5 *** ** Relative 1.3 *** *** Entropy 1.1 *** *** (12.3 bits) 0.9 *** *** 0.7 **** *** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus TA sequence GC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:43229444-43229524 53 1.45e-05 TCTTCTGCTA TGACGTCA TGCAGCAGCC chr3:182727653-182727733 65 1.45e-05 ATACAGAGAA TGACGTCA GCCATTCT chr7:120625377-120625457 30 1.45e-05 ACTTAATCCA TGACGTCA CTGCTAGTAA chrX:118824906-118824986 31 1.45e-05 GCATGGAGAG TGACGTCA GTTTTCCCAG chr6:155475379-155475459 38 3.27e-05 GCAATGTAGG TGACATCA TGCAACAGAA chr15:89613960-89614040 67 3.27e-05 tccactgggc tgacatca taaggg chr7:103556581-103556661 24 3.27e-05 ACTGTTGCTC TGACATCA GCCAATGACT chr10:16993241-16993321 26 3.27e-05 TGGCTAAGGA TGACATCA TCGGCTGCCA chr2:196478768-196478848 69 3.27e-05 CTATGAGCAA TGACATCA ATTT chr1:87258961-87259041 21 3.27e-05 GTGGTTGAAA TGACATCA TGCTTCCTCC chr2:88899786-88899866 19 3.27e-05 GGTACAGAGA TGACATCA CCCTTCACAA chr17:31082179-31082259 44 3.27e-05 TGGTTACAAA TGACATCA TGCTTTCTAA chr12:110481096-11048117 61 3.27e-05 ggcaaaggaa tgacatca tctgatttag chr5:67752627-67752707 52 3.27e-05 CTGCCCAGGA TGACATCA TCCTGGGCCT chr1:234680423-234680503 34 3.27e-05 AACAACCCGC TGACATCA TATGCTAAAT chr15:41782689-41782769 71 4.70e-05 AAGAGCCTGC TGACCTCA TC chr12:92933184-92933264 64 4.70e-05 TTTGCAATAA TGACCTCA GCCTCCCCA chr5:55293684-55293764 41 4.70e-05 attagcactc tgacctca caatttctca chr3:39219326-39219406 33 4.70e-05 CCAGGCTCGG TGACCTCA CGCGAGTGAC chr12:109023675-10902375 44 4.70e-05 CACTATCTGG TGACCTCA TTCCTCCTCA chr17:45275348-45275428 50 4.70e-05 AGCTGGAGAG TGACCTCA TGAGACCAGA chr7:152406893-152406973 19 4.70e-05 TAGTTTAAAA TGACCTCA TACTAGTGTC chr3:43564513-43564593 21 6.17e-05 gcatctgcca tgaggtca gagattctct chr12:6277131-6277211 26 6.17e-05 gtgactcatc tgaggtca ccagctataa chr6:11918895-11918975 42 6.17e-05 TTTGTGGTGA TGAGGTCA CCCAGAGGAC chr15:100243957-10024403 53 6.17e-05 TCATTTTTGG TGAGGTCA CCTTTTTCAG chr1:33840129-33840209 57 6.17e-05 CAAAGCAGGA TGAGGTCA CTTTTCTAGT chr11:57170248-57170328 38 6.17e-05 TTAGCGGGTA TGAGGTCA TTCTCTGGAA chr17:76733601-76733681 44 6.17e-05 CAGCATGTTA TGAGGTCA CAGGCTAAAA chr1:25895551-25895631 25 6.17e-05 GTGTGTGTGA TGAGGTCA CCTCTGGATG chr5:77826334-77826414 25 6.17e-05 CATCATGGAG TGAGGTCA TTTGCCCTGA chr21:45437672-45437752 20 8.05e-05 gcgacgataa tgatgtca tcgaaagaag chr2:240179387-240179467 46 8.05e-05 ctaatgagga tgatgtca tcatcctagg chr21:35028107-35028187 38 8.05e-05 TGTGTCGTGG TGATGTCA TGTATCAGGA chr20:30287130-30287210 34 8.05e-05 TTCAGCTAGA TGATGTCA CCTTCCCAAA chr6:139769336-139769416 17 8.05e-05 AAGGCCCAGA TGATGTCA TTTTCAACTT chr7:44907051-44907131 42 8.05e-05 CTTGCCTAAG TGATGTCA CCAGCTGGGT chr3:150089719-150089799 57 8.05e-05 TGTAGCATGG TGATGTCA CCCCACAGTT chr2:23980708-23980788 21 8.05e-05 TCCAAGTCCA TGATGTCA CAGGATGATT chr7:12762565-12762645 53 9.90e-05 TTGAGGGAGA TGAGATCA TGGATTTGCA chr2:13105702-13105782 48 9.90e-05 AATACAACAA TGAGATCA TCATGTCTGT chr20:40325249-40325329 61 1.23e-04 CAGTCTCTGC TGATATCA GCTGCTGAAG chr12:51008178-51008258 19 1.23e-04 tccttctggg tgatatca ttcacaccca chr4:80120156-80120236 5 1.70e-04 AATA TGATCTCA TATTTAAACA chr11:9634785-9634865 41 1.70e-04 TCCTTTCCGT TGATCTCA GCTTCTATTT chr6:53178723-53178803 56 1.70e-04 AAGGCTGAGG TGACGTCT TCTGTAACCC chr6:133285464-133285544 47 1.70e-04 GAGCCAAAAA TGATCTCA CCAGTTCTCA chr1:222161393-222161473 36 1.89e-04 TGAGTCACCA TGACATCT GTCACATTGG chr2:191199328-191199408 70 1.89e-04 GGCAGAGAAC TGACATCT AAT chr2:88565280-88565360 1 1.89e-04 . TGACATCT GAATGGGGAT chr4:72978385-72978465 69 1.89e-04 AGTCATATTG TGACATCT GTGA chr8:8864266-8864346 3 2.03e-04 GC TGACCTCT TCCTCAAAGG chr5:39167418-39167498 73 2.03e-04 GAGTTTCAGA TGACCTCT chr12:1727845-1727925 66 2.56e-04 ATGAGTCATC TGAGATCT GCCATTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:43229444-43229524 1.4e-05 52_[+3]_20 chr3:182727653-182727733 1.4e-05 64_[+3]_8 chr7:120625377-120625457 1.4e-05 29_[+3]_43 chrX:118824906-118824986 1.4e-05 30_[+3]_42 chr6:155475379-155475459 3.3e-05 37_[+3]_35 chr15:89613960-89614040 3.3e-05 66_[+3]_6 chr7:103556581-103556661 3.3e-05 23_[+3]_49 chr10:16993241-16993321 3.3e-05 25_[+3]_47 chr2:196478768-196478848 3.3e-05 68_[+3]_4 chr1:87258961-87259041 3.3e-05 20_[+3]_52 chr2:88899786-88899866 3.3e-05 18_[+3]_54 chr17:31082179-31082259 3.3e-05 43_[+3]_29 chr12:110481096-11048117 3.3e-05 60_[+3]_12 chr5:67752627-67752707 3.3e-05 51_[+3]_21 chr1:234680423-234680503 3.3e-05 33_[+3]_39 chr15:41782689-41782769 4.7e-05 70_[+3]_2 chr12:92933184-92933264 4.7e-05 63_[+3]_9 chr5:55293684-55293764 4.7e-05 40_[+3]_32 chr3:39219326-39219406 4.7e-05 32_[+3]_40 chr12:109023675-10902375 4.7e-05 43_[+3]_29 chr17:45275348-45275428 4.7e-05 49_[+3]_23 chr7:152406893-152406973 4.7e-05 18_[+3]_54 chr3:43564513-43564593 6.2e-05 20_[+3]_52 chr12:6277131-6277211 6.2e-05 25_[+3]_47 chr6:11918895-11918975 6.2e-05 41_[+3]_31 chr15:100243957-10024403 6.2e-05 52_[+3]_20 chr1:33840129-33840209 6.2e-05 56_[+3]_16 chr11:57170248-57170328 6.2e-05 37_[+3]_35 chr17:76733601-76733681 6.2e-05 43_[+3]_29 chr1:25895551-25895631 6.2e-05 24_[+3]_48 chr5:77826334-77826414 6.2e-05 24_[+3]_48 chr21:45437672-45437752 8e-05 19_[+3]_53 chr2:240179387-240179467 8e-05 45_[+3]_27 chr21:35028107-35028187 8e-05 37_[+3]_35 chr20:30287130-30287210 8e-05 33_[+3]_39 chr6:139769336-139769416 8e-05 16_[+3]_56 chr7:44907051-44907131 8e-05 41_[+3]_31 chr3:150089719-150089799 8e-05 56_[+3]_16 chr2:23980708-23980788 8e-05 20_[+3]_52 chr7:12762565-12762645 9.9e-05 52_[+3]_20 chr2:13105702-13105782 9.9e-05 47_[+3]_25 chr20:40325249-40325329 0.00012 60_[+3]_12 chr12:51008178-51008258 0.00012 18_[+3]_54 chr4:80120156-80120236 0.00017 4_[+3]_68 chr11:9634785-9634865 0.00017 40_[+3]_32 chr6:53178723-53178803 0.00017 55_[+3]_17 chr6:133285464-133285544 0.00017 46_[+3]_26 chr1:222161393-222161473 0.00019 35_[+3]_37 chr2:191199328-191199408 0.00019 69_[+3]_3 chr2:88565280-88565360 0.00019 [+3]_72 chr4:72978385-72978465 0.00019 68_[+3]_4 chr8:8864266-8864346 0.0002 2_[+3]_70 chr5:39167418-39167498 0.0002 72_[+3] chr12:1727845-1727925 0.00026 65_[+3]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACVTCA width=8 seqs=54 chr17:43229444-43229524 ( 53) TGACGTCA 1 chr3:182727653-182727733 ( 65) TGACGTCA 1 chr7:120625377-120625457 ( 30) TGACGTCA 1 chrX:118824906-118824986 ( 31) TGACGTCA 1 chr6:155475379-155475459 ( 38) TGACATCA 1 chr15:89613960-89614040 ( 67) TGACATCA 1 chr7:103556581-103556661 ( 24) TGACATCA 1 chr10:16993241-16993321 ( 26) TGACATCA 1 chr2:196478768-196478848 ( 69) TGACATCA 1 chr1:87258961-87259041 ( 21) TGACATCA 1 chr2:88899786-88899866 ( 19) TGACATCA 1 chr17:31082179-31082259 ( 44) TGACATCA 1 chr12:110481096-11048117 ( 61) TGACATCA 1 chr5:67752627-67752707 ( 52) TGACATCA 1 chr1:234680423-234680503 ( 34) TGACATCA 1 chr15:41782689-41782769 ( 71) TGACCTCA 1 chr12:92933184-92933264 ( 64) TGACCTCA 1 chr5:55293684-55293764 ( 41) TGACCTCA 1 chr3:39219326-39219406 ( 33) TGACCTCA 1 chr12:109023675-10902375 ( 44) TGACCTCA 1 chr17:45275348-45275428 ( 50) TGACCTCA 1 chr7:152406893-152406973 ( 19) TGACCTCA 1 chr3:43564513-43564593 ( 21) TGAGGTCA 1 chr12:6277131-6277211 ( 26) TGAGGTCA 1 chr6:11918895-11918975 ( 42) TGAGGTCA 1 chr15:100243957-10024403 ( 53) TGAGGTCA 1 chr1:33840129-33840209 ( 57) TGAGGTCA 1 chr11:57170248-57170328 ( 38) TGAGGTCA 1 chr17:76733601-76733681 ( 44) TGAGGTCA 1 chr1:25895551-25895631 ( 25) TGAGGTCA 1 chr5:77826334-77826414 ( 25) TGAGGTCA 1 chr21:45437672-45437752 ( 20) TGATGTCA 1 chr2:240179387-240179467 ( 46) TGATGTCA 1 chr21:35028107-35028187 ( 38) TGATGTCA 1 chr20:30287130-30287210 ( 34) TGATGTCA 1 chr6:139769336-139769416 ( 17) TGATGTCA 1 chr7:44907051-44907131 ( 42) TGATGTCA 1 chr3:150089719-150089799 ( 57) TGATGTCA 1 chr2:23980708-23980788 ( 21) TGATGTCA 1 chr7:12762565-12762645 ( 53) TGAGATCA 1 chr2:13105702-13105782 ( 48) TGAGATCA 1 chr20:40325249-40325329 ( 61) TGATATCA 1 chr12:51008178-51008258 ( 19) TGATATCA 1 chr4:80120156-80120236 ( 5) TGATCTCA 1 chr11:9634785-9634865 ( 41) TGATCTCA 1 chr6:53178723-53178803 ( 56) TGACGTCT 1 chr6:133285464-133285544 ( 47) TGATCTCA 1 chr1:222161393-222161473 ( 36) TGACATCT 1 chr2:191199328-191199408 ( 70) TGACATCT 1 chr2:88565280-88565360 ( 1) TGACATCT 1 chr4:72978385-72978465 ( 69) TGACATCT 1 chr8:8864266-8864346 ( 3) TGACCTCT 1 chr5:39167418-39167498 ( 73) TGACCTCT 1 chr12:1727845-1727925 ( 66) TGAGATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.0499 E= 1.5e-025 -1240 -1240 -1240 182 -1240 -1240 218 -1240 184 -1240 -1240 -1240 -1240 130 1 -23 41 3 89 -1240 -1240 -1240 -1240 182 -1240 220 -1240 -1240 161 -1240 -1240 -93 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 1.5e-025 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.537037 0.222222 0.240741 0.370370 0.222222 0.407407 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.851852 0.000000 0.000000 0.148148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACVTCA MEME-3 regular expression -------------------------------------------------------------------------------- TGA[CTG][GAC]TCA -------------------------------------------------------------------------------- Time 11.28 secs. ******************************************************************************** ******************************************************************************** MOTIF CCAGRAAA MEME-4 width = 8 sites = 15 llr = 148 E-value = 8.5e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::a:5aa7 pos.-specific C aa:::::3 probability G :::a5::: matrix T :::::::: bits 2.2 ** * 2.0 ** * 1.8 **** ** 1.5 **** ** Relative 1.3 **** ** Entropy 1.1 ******** (14.2 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCAGGAAA consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:85098772-85098852 66 1.41e-05 ttcagtgttt ccaGGAAA TGCCTTC chr16:24474599-24474679 52 1.41e-05 ataaggttct ccaggaaa ggctgataaa chr21:22572617-22572697 7 1.41e-05 TTCATA CCAGGAAA CGCTGCGTGA chr8:38895806-38895886 57 1.41e-05 actcagtctg ccaggaaa gcttctaccc chr3:118703731-118703811 36 1.41e-05 CAGAGCCCTT CCAGGAAA GAAAAGGCAG chr11:86304102-86304182 45 1.41e-05 TGGCTCACTG CCAGGAAA ATGACTCATT chr3:150089719-150089799 9 1.41e-05 CTTACAGT CCAGGAAA CTTTTTTTTC chr17:43229444-43229524 71 3.18e-05 TGCAGCAGCC CCAGAAAA AC chr6:53178723-53178803 40 3.18e-05 TGGATGTTTC CCAGAAAA GGCTGAGGTG chr12:76371817-76371897 23 3.18e-05 AGTGACTCAC CCAGAAAA CCATCCACTG chr7:44907051-44907131 68 3.18e-05 GTTTTCACTG CCAGAAAA TCAGC chr6:134557256-134557336 66 4.28e-05 GAGGGGGATT CCAGGAAC TAGAATT chr9:97699918-97699998 73 5.67e-05 cattgccttc ccagaaac chr2:191269445-191269525 10 5.67e-05 ttgctcaag ccagaaac ctgtgagtca chrX:118824906-118824986 45 5.67e-05 GTCAGTTTTC CCAGAAAC CCATTTATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:85098772-85098852 1.4e-05 65_[+4]_7 chr16:24474599-24474679 1.4e-05 51_[+4]_21 chr21:22572617-22572697 1.4e-05 6_[+4]_66 chr8:38895806-38895886 1.4e-05 56_[+4]_16 chr3:118703731-118703811 1.4e-05 35_[+4]_37 chr11:86304102-86304182 1.4e-05 44_[+4]_28 chr3:150089719-150089799 1.4e-05 8_[+4]_64 chr17:43229444-43229524 3.2e-05 70_[+4]_2 chr6:53178723-53178803 3.2e-05 39_[+4]_33 chr12:76371817-76371897 3.2e-05 22_[+4]_50 chr7:44907051-44907131 3.2e-05 67_[+4]_5 chr6:134557256-134557336 4.3e-05 65_[+4]_7 chr9:97699918-97699998 5.7e-05 72_[+4] chr2:191269445-191269525 5.7e-05 9_[+4]_63 chrX:118824906-118824986 5.7e-05 44_[+4]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAGRAAA width=8 seqs=15 chr1:85098772-85098852 ( 66) CCAGGAAA 1 chr16:24474599-24474679 ( 52) CCAGGAAA 1 chr21:22572617-22572697 ( 7) CCAGGAAA 1 chr8:38895806-38895886 ( 57) CCAGGAAA 1 chr3:118703731-118703811 ( 36) CCAGGAAA 1 chr11:86304102-86304182 ( 45) CCAGGAAA 1 chr3:150089719-150089799 ( 9) CCAGGAAA 1 chr17:43229444-43229524 ( 71) CCAGAAAA 1 chr6:53178723-53178803 ( 40) CCAGAAAA 1 chr12:76371817-76371897 ( 23) CCAGAAAA 1 chr7:44907051-44907131 ( 68) CCAGAAAA 1 chr6:134557256-134557336 ( 66) CCAGGAAC 1 chr9:97699918-97699998 ( 73) CCAGAAAC 1 chr2:191269445-191269525 ( 10) CCAGAAAC 1 chrX:118824906-118824986 ( 45) CCAGAAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.9222 E= 8.5e+000 -1055 220 -1055 -1055 -1055 220 -1055 -1055 184 -1055 -1055 -1055 -1055 -1055 218 -1055 74 -1055 127 -1055 184 -1055 -1055 -1055 184 -1055 -1055 -1055 139 29 -1055 -1055 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 15 E= 8.5e+000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.466667 0.000000 0.533333 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.733333 0.266667 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGRAAA MEME-4 regular expression -------------------------------------------------------------------------------- CCAG[GA]AA[AC] -------------------------------------------------------------------------------- Time 14.54 secs. ******************************************************************************** ******************************************************************************** MOTIF GCAGCTGG MEME-5 width = 8 sites = 21 llr = 188 E-value = 2.7e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 22a1:::3 pos.-specific C :8::a::: probability G 7::9::a7 matrix T :::::a:: bits 2.2 * 2.0 * * 1.8 * *** 1.5 ***** Relative 1.3 ******* Entropy 1.1 ******** (12.9 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GCAGCTGG consensus AA A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:64344886-64344966 15 8.95e-06 GAGGGGGAGG GCAGCTGG AAGTTAGGCT chr16:69511165-69511245 18 8.95e-06 tctattactt gcagctgg aagcatcctc chr3:44397285-44397365 64 8.95e-06 TAAAATTTGA GCAGCTGG CAGGAGAGC chr1:25895551-25895631 5 8.95e-06 CCCA GCAGCTGG GTGTGTGTGT chr15:67316844-67316924 30 2.03e-05 GGACAGTTTG GCAGCTGA GGGAAAGATG chr20:30287130-30287210 63 2.03e-05 CTCCTGACCA GCAGCTGA GATGGTAAAA chr18:55487412-55487492 60 2.03e-05 TCACAGTGCA GCAGCTGA CTACTTGCTA chr7:120625377-120625457 50 3.16e-05 GCTAGTAACT ACAGCTGG ATTTTACCTT chr22:47330947-47331027 49 3.16e-05 TGTGTCAGGC ACAGCTGG TCACTGATAT chr6:34665858-34665938 54 3.16e-05 tcaagattac acagctgg aaagtggGTT chr15:91379652-91379732 35 4.30e-05 CACTACATTT GAAGCTGG ATGAGTCATT chr13:50819367-50819447 7 4.30e-05 tgacta gaagctgg gatcttgggt chr1:211210518-211210598 66 4.30e-05 agtaagcaga gaagctgg gagtaga chr5:172882452-172882532 71 5.43e-05 CACAGAGATA GCAACTGG AG chr1:114347503-114347583 11 5.43e-05 TAGCAGTTAG GCAACTGG TCAAGAGTAA chr12:107370262-10737034 12 6.86e-05 TTCAGACTTC ACAGCTGA AAGTGAGTCA chr3:196001640-196001720 12 8.30e-05 CTAATTCTTA GAAGCTGA AGGTGACACC chr10:22919698-22919778 7 1.06e-04 TCCTCT AAAGCTGG GACAGGATAT chr7:44907051-44907131 50 1.06e-04 AGTGATGTCA CCAGCTGG GTTTTCACTG chr12:122203590-12220367 22 1.15e-04 AGGGAGCAAG GCAGGTGG GCTAAATCCG chr5:77826334-77826414 51 1.30e-04 GAGTTCTACA GCAACTGA TAAGGCCTTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:64344886-64344966 9e-06 14_[+5]_58 chr16:69511165-69511245 9e-06 17_[+5]_55 chr3:44397285-44397365 9e-06 63_[+5]_9 chr1:25895551-25895631 9e-06 4_[+5]_68 chr15:67316844-67316924 2e-05 29_[+5]_43 chr20:30287130-30287210 2e-05 62_[+5]_10 chr18:55487412-55487492 2e-05 59_[+5]_13 chr7:120625377-120625457 3.2e-05 49_[+5]_23 chr22:47330947-47331027 3.2e-05 48_[+5]_24 chr6:34665858-34665938 3.2e-05 53_[+5]_19 chr15:91379652-91379732 4.3e-05 34_[+5]_38 chr13:50819367-50819447 4.3e-05 6_[+5]_66 chr1:211210518-211210598 4.3e-05 65_[+5]_7 chr5:172882452-172882532 5.4e-05 70_[+5]_2 chr1:114347503-114347583 5.4e-05 10_[+5]_62 chr12:107370262-10737034 6.9e-05 11_[+5]_61 chr3:196001640-196001720 8.3e-05 11_[+5]_61 chr10:22919698-22919778 0.00011 6_[+5]_66 chr7:44907051-44907131 0.00011 49_[+5]_23 chr12:122203590-12220367 0.00012 21_[+5]_51 chr5:77826334-77826414 0.00013 50_[+5]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCAGCTGG width=8 seqs=21 chr17:64344886-64344966 ( 15) GCAGCTGG 1 chr16:69511165-69511245 ( 18) GCAGCTGG 1 chr3:44397285-44397365 ( 64) GCAGCTGG 1 chr1:25895551-25895631 ( 5) GCAGCTGG 1 chr15:67316844-67316924 ( 30) GCAGCTGA 1 chr20:30287130-30287210 ( 63) GCAGCTGA 1 chr18:55487412-55487492 ( 60) GCAGCTGA 1 chr7:120625377-120625457 ( 50) ACAGCTGG 1 chr22:47330947-47331027 ( 49) ACAGCTGG 1 chr6:34665858-34665938 ( 54) ACAGCTGG 1 chr15:91379652-91379732 ( 35) GAAGCTGG 1 chr13:50819367-50819447 ( 7) GAAGCTGG 1 chr1:211210518-211210598 ( 66) GAAGCTGG 1 chr5:172882452-172882532 ( 71) GCAACTGG 1 chr1:114347503-114347583 ( 11) GCAACTGG 1 chr12:107370262-10737034 ( 12) ACAGCTGA 1 chr3:196001640-196001720 ( 12) GAAGCTGA 1 chr10:22919698-22919778 ( 7) AAAGCTGG 1 chr7:44907051-44907131 ( 50) CCAGCTGG 1 chr12:122203590-12220367 ( 22) GCAGGTGG 1 chr5:77826334-77826414 ( 51) GCAACTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.7488 E= 2.7e+002 -23 -219 169 -1104 -23 181 -1104 -1104 184 -1104 -1104 -1104 -96 -1104 196 -1104 -1104 213 -221 -1104 -1104 -1104 -1104 182 -1104 -1104 218 -1104 3 -1104 169 -1104 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 21 E= 2.7e+002 0.238095 0.047619 0.714286 0.000000 0.238095 0.761905 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.952381 0.047619 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.285714 0.000000 0.714286 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCAGCTGG MEME-5 regular expression -------------------------------------------------------------------------------- [GA][CA]AGCTG[GA] -------------------------------------------------------------------------------- Time 17.70 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:77826334-77826414 4.47e-06 24_[+3(6.17e-05)]_35_[+1(6.59e-05)]_\ 5 chr1:90441311-90441391 1.58e-02 80 chr6:170122758-170122838 4.80e-01 80 chr1:147323476-147323556 3.11e-05 15_[+2(1.88e-05)]_37_[+2(1.88e-05)]_\ 12 chr12:76577447-76577527 7.49e-05 16_[+1(5.13e-05)]_20_[+1(3.68e-05)]_\ 28 chr1:234680423-234680503 1.13e-02 33_[+3(3.27e-05)]_39 chr5:67752627-67752707 1.74e-02 51_[+3(3.27e-05)]_21 chr1:145042873-145042953 8.50e-03 28_[+2(6.65e-05)]_44 chrX:21945098-21945178 6.74e-02 80 chr12:110481096-11048117 5.21e-02 60_[+3(3.27e-05)]_12 chr2:23980708-23980788 8.97e-04 20_[+3(8.05e-05)]_52 chr16:11709672-11709752 3.48e-03 25_[+1(1.83e-05)]_2_[+1(1.83e-05)]_\ 37 chr2:151024290-151024370 2.84e-05 41_[+2(1.88e-05)]_31 chr4:25175270-25175350 5.94e-03 34_[+1(5.13e-05)]_38 chr7:107661136-107661216 2.73e-04 39_[+1(1.83e-05)]_33 chr17:31082179-31082259 9.11e-03 43_[+3(3.27e-05)]_29 chr3:150089719-150089799 2.54e-03 8_[+4(1.41e-05)]_40_[+3(8.05e-05)]_\ 16 chr10:65467217-65467297 2.56e-04 37_[+1(6.59e-05)]_8_[+1(8.02e-05)]_\ 19 chr1:52216051-52216131 4.41e-04 41_[+1(1.83e-05)]_31 chr11:86304102-86304182 8.42e-06 44_[+4(1.41e-05)]_[+1(1.83e-05)]_20 chr10:93661695-93661775 6.91e-03 22_[+2(3.73e-05)]_5_[+2(3.73e-05)]_\ 37 chr1:25895551-25895631 3.44e-08 4_[+5(8.95e-06)]_12_[+3(6.17e-05)]_\ 7_[+1(1.83e-05)]_33 chr4:77262347-77262427 5.51e-04 12_[+2(1.88e-05)]_60 chr5:68026661-68026741 3.22e-01 80 chr5:140900862-140900942 2.53e-04 48_[+2(1.88e-05)]_12_[+1(8.02e-05)]_\ 4 chr7:152406893-152406973 3.01e-04 18_[+3(4.70e-05)]_20_[+1(5.13e-05)]_\ 3_[+3(8.05e-05)]_15 chr7:44907051-44907131 3.68e-08 23_[+1(3.68e-05)]_10_[+3(8.05e-05)]_\ 18_[+4(3.18e-05)]_5 chr6:133285464-133285544 7.86e-04 9_[+1(5.13e-05)]_63 chr5:56989053-56989133 4.92e-06 32_[+1(1.83e-05)]_18_[+2(1.88e-05)]_\ 14 chr4:72978385-72978465 1.45e-04 16_[+2(1.88e-05)]_20_[+2(1.88e-05)]_\ 4_[+2(1.88e-05)]_16 chr11:44782527-44782607 2.56e-03 46_[+2(1.88e-05)]_26 chr3:44397285-44397365 5.80e-06 26_[+1(1.83e-05)]_29_[+5(8.95e-06)]_\ 9 chr6:111698947-111699027 1.33e-04 50_[+2(1.88e-05)]_22 chr8:102464061-102464141 2.73e-04 14_[+1(6.59e-05)]_58 chr3:65590651-65590731 6.95e-05 36_[+1(1.83e-05)]_36 chr11:3887164-3887244 5.28e-02 80 chr1:52035581-52035661 1.08e-03 32_[+2(1.88e-05)]_6_[+1(6.59e-05)]_\ 26 chr6:40965391-40965471 4.01e-04 20_[+1(3.68e-05)]_52 chr12:102868400-10286848 2.82e-04 56_[+1(1.83e-05)]_16 chr14:23006006-23006086 2.51e-04 12_[+1(3.68e-05)]_3_[+1(6.59e-05)]_\ 40_[+2(1.88e-05)]_1 chr2:88899786-88899866 6.09e-05 18_[+3(3.27e-05)]_39_[+1(3.68e-05)]_\ 7 chr9:99102153-99102233 1.67e-03 13_[+1(3.68e-05)]_59 chr7:37071680-37071760 2.57e-03 7_[+2(1.88e-05)]_65 chr4:109908973-109909053 4.57e-04 29_[+1(1.83e-05)]_43 chr5:40689694-40689774 7.17e-05 18_[+1(8.02e-05)]_42_[+2(1.88e-05)]_\ 4 chr1:87258961-87259041 1.42e-02 20_[+3(3.27e-05)]_52 chr12:47672026-47672106 3.22e-03 28_[+2(1.88e-05)]_3_[+2(1.88e-05)]_\ 33 chr3:65016686-65016766 5.04e-04 48_[+2(1.88e-05)]_24 chr12:66049071-66049151 2.78e-04 29_[+2(3.73e-05)]_43 chr8:124161486-124161566 9.95e-04 32_[+1(1.83e-05)]_40 chr6:130499989-130500069 1.18e-03 44_[+1(3.68e-05)]_28 chr13:97908757-97908837 1.33e-01 80 chr3:118703731-118703811 5.84e-06 35_[+4(1.41e-05)]_12_[+2(1.88e-05)]_\ 17 chr1:234881624-234881704 4.03e-03 71_[+2(1.88e-05)]_1 chr6:34665858-34665938 1.59e-05 34_[+1(1.83e-05)]_11_[+5(3.16e-05)]_\ 19 chr15:50429616-50429696 1.61e-03 41_[+1(1.83e-05)]_31 chr10:22919698-22919778 8.65e-05 37_[+1(1.83e-05)]_35 chr8:38895806-38895886 1.52e-05 27_[+1(1.83e-05)]_8_[+1(8.02e-05)]_\ 5_[+4(1.41e-05)]_16 chr16:69511165-69511245 4.37e-06 17_[+5(8.95e-06)]_34_[+1(1.83e-05)]_\ 13 chr11:95440233-95440313 8.56e-01 80 chr1:244486426-244486506 4.64e-03 34_[+1(1.83e-05)]_3_[+1(8.02e-05)]_\ 27 chr3:196540955-196541035 3.18e-03 34_[+1(3.68e-05)]_38 chr12:76371817-76371897 8.86e-06 13_[+1(5.13e-05)]_1_[+4(3.18e-05)]_\ 50 chr3:45085346-45085426 1.78e-04 44_[+1(1.83e-05)]_28 chr5:39167418-39167498 7.34e-05 20_[+1(1.83e-05)]_52 chr10:93347942-93348022 3.88e-04 35_[+2(1.88e-05)]_37 chr13:29050434-29050514 1.54e-03 48_[+1(5.13e-05)]_24 chr3:44277563-44277643 1.25e-03 31_[+2(1.88e-05)]_41 chr4:87932956-87933036 1.74e-04 26_[+2(1.88e-05)]_46 chr3:14307168-14307248 8.59e-05 22_[+2(3.73e-05)]_50 chr1:168368401-168368481 4.82e-04 38_[+1(1.83e-05)]_34 chr17:45275348-45275428 2.29e-02 49_[+3(4.70e-05)]_23 chr2:102954617-102954697 6.10e-04 45_[+2(3.73e-05)]_27 chr21:43854263-43854343 3.31e-01 80 chr4:187751125-187751205 4.40e-03 57_[+2(3.73e-05)]_15 chr2:88565280-88565360 1.10e-04 16_[+1(3.68e-05)]_7_[+1(3.68e-05)]_\ 41 chr11:96095105-96095185 7.38e-04 58_[+2(6.65e-05)]_14 chr17:39010635-39010715 1.29e-04 [+2(1.88e-05)]_32_[+1(1.83e-05)]_32 chr1:19330011-19330091 1.20e-03 28_[+2(1.88e-05)]_44 chr11:93885528-93885608 1.29e-03 28_[+1(5.13e-05)]_32_[+1(1.83e-05)]_\ 4 chr13:101045123-10104520 3.23e-04 25_[+1(5.13e-05)]_9_[+1(5.13e-05)]_\ 15_[+1(5.13e-05)]_7 chr12:76328377-76328457 3.61e-02 80 chr6:134557256-134557336 1.03e-04 38_[+1(6.59e-05)]_19_[+4(4.28e-05)]_\ 7 chr10:3848163-3848243 8.80e-04 26_[+2(1.88e-05)]_46 chr10:11594259-11594339 1.65e-04 45_[+1(6.59e-05)]_6_[+2(1.88e-05)]_\ 13 chr17:32269599-32269679 1.22e-03 27_[+2(1.88e-05)]_45 chr12:109023675-10902375 1.92e-01 43_[+3(4.70e-05)]_29 chr9:75764551-75764631 7.04e-04 43_[+2(1.88e-05)]_29 chr2:191199328-191199408 2.94e-05 10_[+2(1.88e-05)]_62 chr3:39219326-39219406 3.56e-02 32_[+3(4.70e-05)]_40 chr1:211210518-211210598 2.19e-06 26_[+1(1.83e-05)]_3_[+2(1.88e-05)]_\ 20_[+5(4.30e-05)]_7 chr11:86451825-86451905 1.26e-03 25_[+2(1.88e-05)]_47 chr7:871488-871568 4.86e-04 30_[+2(1.88e-05)]_42 chr2:28499122-28499202 1.84e-03 52_[+2(1.88e-05)]_20 chr2:196478768-196478848 1.05e-04 20_[+2(1.88e-05)]_16_[+3(9.90e-05)]_\ 16_[+3(3.27e-05)]_4 chr18:55487412-55487492 1.09e-02 59_[+5(2.03e-05)]_13 chr10:16993241-16993321 5.94e-02 25_[+3(3.27e-05)]_47 chr11:35052396-35052476 3.52e-04 53_[+2(3.73e-05)]_19 chr19:55670381-55670461 4.25e-03 68_[+1(8.02e-05)]_4 chr17:76733601-76733681 1.50e-03 43_[+3(6.17e-05)]_29 chr22:47330947-47331027 7.22e-06 27_[+2(1.88e-05)]_13_[+5(3.16e-05)]_\ 24 chr7:103556581-103556661 5.14e-06 23_[+3(3.27e-05)]_4_[+1(1.83e-05)]_\ 37 chrX:118824906-118824986 5.28e-04 30_[+3(1.45e-05)]_6_[+4(5.67e-05)]_\ 28 chr1:179845503-179845583 4.92e-04 34_[+1(3.68e-05)]_38 chr12:51008178-51008258 1.43e-01 80 chr9:111880337-111880417 6.61e-01 80 chr5:88609773-88609853 1.23e-03 23_[+1(1.83e-05)]_49 chr6:14744381-14744461 2.47e-03 10_[+1(5.13e-05)]_62 chr6:53178723-53178803 5.01e-03 39_[+4(3.18e-05)]_33 chrX:119683954-119684034 4.36e-03 11_[+1(5.13e-05)]_61 chr11:86454582-86454662 6.94e-05 18_[+2(6.65e-05)]_6_[+1(5.13e-05)]_\ 18_[+1(3.68e-05)]_14 chr15:49238376-49238456 6.75e-04 32_[+1(1.83e-05)]_40 chr11:9634785-9634865 4.32e-02 80 chr4:122749149-122749229 4.00e-03 80 chr7:99160649-99160729 1.08e-03 14_[+1(1.83e-05)]_16_[+1(6.59e-05)]_\ 34 chr2:65593879-65593959 3.50e-03 32_[+2(1.88e-05)]_40 chr12:28119905-28119985 1.37e-03 43_[+1(1.83e-05)]_29 chr6:139769336-139769416 4.68e-02 16_[+3(8.05e-05)]_56 chr2:150990312-150990392 2.59e-03 20_[+1(3.68e-05)]_2_[+1(1.83e-05)]_\ 42 chr17:64344886-64344966 9.98e-06 14_[+5(8.95e-06)]_21_[+2(1.88e-05)]_\ 29 chr20:30287130-30287210 1.84e-05 15_[+5(2.03e-05)]_10_[+3(8.05e-05)]_\ 21_[+5(2.03e-05)]_10 chr2:170046840-170046920 1.69e-02 80 chr6:111587225-111587305 1.98e-03 42_[+1(8.02e-05)]_30 chr21:35028107-35028187 6.74e-03 37_[+3(8.05e-05)]_35 chr2:170526786-170526866 1.80e-03 48_[+1(3.68e-05)]_24 chr15:89613960-89614040 2.36e-02 66_[+3(3.27e-05)]_6 chr1:224730649-224730729 5.57e-04 20_[+2(3.73e-05)]_52 chr11:46096916-46096996 2.65e-04 22_[+2(3.73e-05)]_50 chr7:142661692-142661772 5.24e-04 30_[+2(1.88e-05)]_42 chr2:240179387-240179467 7.89e-03 45_[+3(8.05e-05)]_27 chr6:155475379-155475459 2.84e-02 37_[+3(3.27e-05)]_35 chr21:47608442-47608522 3.38e-04 35_[+2(1.88e-05)]_37 chrX:65370197-65370277 7.72e-04 32_[+2(1.88e-05)]_40 chr5:142625754-142625834 1.65e-04 41_[+2(1.88e-05)]_31 chr20:60663691-60663771 1.02e-03 18_[+1(1.83e-05)]_33_[+2(3.73e-05)]_\ 13 chr14:31500924-31501004 1.65e-03 38_[+2(1.88e-05)]_34 chr22:22191630-22191710 3.50e-01 80 chr11:57170248-57170328 7.50e-02 37_[+3(6.17e-05)]_35 chr2:112814128-112814208 2.73e-04 30_[+1(1.83e-05)]_42 chr5:174945014-174945094 7.43e-05 5_[+1(1.83e-05)]_67 chr1:237068542-237068622 1.02e-03 42_[+1(1.83e-05)]_30 chrX:67791717-67791797 1.28e-03 55_[+1(1.83e-05)]_8_[+1(3.68e-05)]_\ 1 chr16:8138110-8138190 1.43e-03 60_[+2(1.88e-05)]_12 chr7:120625377-120625457 1.01e-03 29_[+3(1.45e-05)]_12_[+5(3.16e-05)]_\ 23 chr15:40559163-40559243 1.71e-03 35_[+1(6.59e-05)]_19_[+1(6.59e-05)]_\ 10 chr1:68316491-68316571 8.31e-04 21_[+2(1.88e-05)]_51 chr3:11330929-11331009 5.22e-03 38_[+1(1.83e-05)]_34 chr2:13105702-13105782 3.60e-05 18_[+1(1.83e-05)]_21_[+3(9.90e-05)]_\ 25 chr1:41575406-41575486 1.15e-03 43_[+2(1.88e-05)]_29 chr20:40325249-40325329 7.81e-07 40_[+2(3.73e-05)]_32 chr18:57213553-57213633 6.85e-01 80 chr5:55293684-55293764 6.53e-05 23_[+1(1.83e-05)]_9_[+3(4.70e-05)]_\ 32 chr1:114347503-114347583 3.24e-05 10_[+5(5.43e-05)]_38_[+1(1.83e-05)]_\ 16 chr21:22572617-22572697 1.79e-05 6_[+4(1.41e-05)]_27_[+1(1.83e-05)]_\ 31 chr6:16345757-16345837 1.10e-03 38_[+1(1.83e-05)]_34 chr6:42192381-42192461 1.24e-03 19_[+2(1.88e-05)]_7_[+1(1.83e-05)]_\ 21_[+2(1.88e-05)]_9 chr13:50819367-50819447 7.01e-05 6_[+5(4.30e-05)]_29_[+1(8.02e-05)]_\ 15_[+1(5.13e-05)]_6 chr11:65138800-65138880 1.71e-01 80 chr16:24474599-24474679 2.07e-05 51_[+4(1.41e-05)]_11_[+1(3.68e-05)]_\ 2 chr1:212408108-212408188 4.51e-04 26_[+1(1.83e-05)]_46 chr18:55513633-55513713 7.54e-02 80 chr1:219321194-219321274 4.07e-02 80 chr2:182675677-182675757 2.62e-04 19_[+1(1.83e-05)]_53 chr3:99945805-99945885 4.09e-01 80 chr15:96100957-96101037 1.16e-04 6_[+2(1.88e-05)]_26_[+1(1.83e-05)]_\ 32 chr12:92933184-92933264 1.92e-02 63_[+3(4.70e-05)]_9 chr4:80120156-80120236 4.16e-01 80 chr2:173913688-173913768 2.02e-04 26_[+1(1.83e-05)]_34_[+1(1.83e-05)]_\ 4 chr10:21625946-21626026 1.39e-03 71_[+1(5.13e-05)]_1 chr22:30303866-30303946 2.88e-05 32_[+5(2.03e-05)]_40 chr7:12762565-12762645 2.00e-02 52_[+3(9.90e-05)]_20 chr17:43398438-43398518 1.83e-04 12_[+2(1.88e-05)]_60 chr15:41782689-41782769 2.17e-03 70_[+3(4.70e-05)]_2 chr6:17715451-17715531 3.22e-03 34_[+1(3.68e-05)]_4_[+2(3.73e-05)]_\ 26 chr14:22802555-22802635 7.46e-03 40_[+1(8.02e-05)]_7_[+1(5.13e-05)]_\ 17 chr11:111913526-11191360 1.32e-03 44_[+2(1.88e-05)]_28 chr10:72475745-72475825 1.12e-05 41_[+2(3.73e-05)]_2_[+1(1.83e-05)]_\ 21 chr2:159071093-159071173 4.09e-04 28_[+2(1.88e-05)]_44 chr12:122203590-12220367 2.23e-04 41_[+2(3.73e-05)]_5_[+2(3.73e-05)]_\ 18 chr15:91379652-91379732 4.88e-05 6_[+5(3.16e-05)]_20_[+5(4.30e-05)]_\ 1_[+2(1.88e-05)]_29 chr1:52127010-52127090 5.36e-03 80 chr22:22133425-22133505 4.69e-03 23_[+1(1.83e-05)]_49 chr15:67316844-67316924 1.31e-05 29_[+5(2.03e-05)]_7_[+1(1.83e-05)]_\ 28 chr21:45437672-45437752 1.91e-01 19_[+3(8.05e-05)]_53 chr1:222161393-222161473 1.08e-04 24_[+1(3.68e-05)]_48 chr1:33840129-33840209 8.96e-02 56_[+3(6.17e-05)]_16 chr6:161650281-161650361 9.39e-05 46_[+2(3.73e-05)]_26 chr6:119468618-119468698 1.55e-04 22_[+2(1.88e-05)]_7_[+1(1.83e-05)]_\ 35 chr2:191269445-191269525 8.98e-05 9_[+4(5.67e-05)]_3_[+2(1.88e-05)]_\ 52 chr17:42209784-42209864 1.14e-03 18_[+2(1.88e-05)]_54 chr10:64996294-64996374 1.38e-03 6_[+2(1.88e-05)]_16_[+2(6.65e-05)]_\ 42 chr8:54640442-54640522 7.44e-04 26_[+2(3.73e-05)]_46 chr11:129836365-12983644 7.87e-04 7_[+2(1.88e-05)]_65 chr2:69997518-69997598 8.19e-04 50_[+1(1.83e-05)]_22 chr15:100243957-10024403 1.04e-01 52_[+3(6.17e-05)]_20 chr3:182727653-182727733 5.28e-02 64_[+3(1.45e-05)]_8 chr12:1727845-1727925 5.70e-05 56_[+2(1.88e-05)]_16 chrX:30301700-30301780 2.32e-03 40_[+2(1.88e-05)]_32 chr3:33984156-33984236 1.76e-04 52_[+2(1.88e-05)]_20 chr7:92262816-92262896 1.93e-04 51_[+1(1.83e-05)]_21 chr14:102438878-10243895 2.01e-04 37_[+2(3.73e-05)]_35 chr6:11918895-11918975 5.46e-03 41_[+3(6.17e-05)]_31 chr5:34924186-34924266 8.62e-04 34_[+1(3.68e-05)]_5_[+2(3.73e-05)]_\ 25 chr12:6277131-6277211 4.05e-05 16_[+2(3.73e-05)]_1_[+3(6.17e-05)]_\ 47 chr11:65042800-65042880 4.36e-02 30_[+1(3.68e-05)]_42 chr14:34966227-34966307 2.26e-04 50_[+1(1.83e-05)]_22 chr2:74079350-74079430 1.89e-03 30_[+1(1.83e-05)]_9_[+1(5.13e-05)]_\ 25 chr2:173118027-173118107 2.05e-04 39_[+2(3.73e-05)]_21_[+2(6.65e-05)]_\ 4 chr13:44717537-44717617 9.03e-03 80 chr9:6014845-6014925 1.66e-03 54_[+2(1.88e-05)]_18 chr17:33760732-33760812 1.66e-03 41_[+1(1.83e-05)]_31 chr12:107370262-10737034 6.69e-05 11_[+5(6.86e-05)]_2_[+1(6.59e-05)]_\ 51 chr16:25644972-25645052 2.35e-04 7_[+2(1.88e-05)]_8_[+1(5.13e-05)]_9_\ [+1(3.68e-05)]_32 chr10:17258341-17258421 9.79e-04 17_[+1(3.68e-05)]_55 chr5:112214568-112214648 7.85e-04 69_[+1(1.83e-05)]_3 chr17:43229444-43229524 1.42e-03 52_[+3(1.45e-05)]_10_[+4(3.18e-05)]_\ 2 chr3:152884147-152884227 3.49e-03 51_[+1(6.59e-05)]_21 chr5:32537697-32537777 3.30e-03 39_[+1(1.83e-05)]_33 chr5:118660115-118660195 2.34e-03 33_[+2(6.65e-05)]_39 chr21:26946387-26946467 1.31e-03 35_[+1(3.68e-05)]_37 chr12:107133234-10713331 2.29e-04 55_[+1(1.83e-05)]_17 chr9:5879688-5879768 6.91e-04 8_[+1(1.83e-05)]_35_[+1(8.02e-05)]_\ 21 chr1:55645057-55645137 2.36e-04 46_[+1(1.83e-05)]_26 chr6:6972872-6972952 2.06e-03 9_[+1(1.83e-05)]_63 chr9:71795777-71795857 5.98e-03 56_[+2(1.88e-05)]_16 chr3:43564513-43564593 1.65e-02 20_[+3(6.17e-05)]_52 chr2:12317267-12317347 6.93e-04 25_[+2(1.88e-05)]_47 chr4:55451914-55451994 1.42e-04 30_[+2(3.73e-05)]_42 chr9:124049437-124049517 2.50e-03 45_[+1(5.13e-05)]_4_[+2(6.65e-05)]_\ 15 chr9:97699918-97699998 5.13e-05 31_[+1(1.83e-05)]_5_[+1(1.83e-05)]_\ 20_[+4(5.67e-05)] chr6:135613075-135613155 3.49e-05 20_[+1(1.83e-05)]_52 chr14:50788071-50788151 2.11e-04 24_[+2(1.88e-05)]_48 chr18:20248072-20248152 1.54e-03 13_[+2(1.88e-05)]_4_[+2(3.73e-05)]_\ 47 chr3:25645820-25645900 1.23e-04 32_[+1(1.83e-05)]_40 chr17:78765930-78766010 9.28e-04 28_[+2(3.73e-05)]_2_[+2(1.88e-05)]_\ 34 chr3:196001640-196001720 2.28e-05 11_[+5(8.30e-05)]_13_[+2(1.88e-05)]_\ 40 chr1:32166815-32166895 5.30e-03 11_[+1(5.13e-05)]_61 chr13:114147788-11414786 1.16e-02 80 chr3:5809093-5809173 6.48e-05 24_[+2(1.88e-05)]_48 chr21:15937653-15937733 1.76e-04 29_[+1(1.83e-05)]_43 chr9:37953832-37953912 2.00e-03 6_[+1(3.68e-05)]_7_[+2(3.73e-05)]_\ 51 chr1:85098772-85098852 2.44e-05 22_[+2(1.88e-05)]_35_[+4(1.41e-05)]_\ 7 chr5:172882452-172882532 2.38e-04 70_[+5(5.43e-05)]_2 chr8:8864266-8864346 1.24e-05 26_[+1(6.59e-05)]_38_[+4(8.86e-05)] chr9:37200788-37200868 7.86e-03 43_[+2(3.73e-05)]_29 chr9:125164798-125164878 2.61e-03 39_[+1(1.83e-05)]_33 chr7:102632249-102632329 7.19e-04 32_[+1(3.68e-05)]_20_[+2(1.88e-05)]_\ 12 chr1:68166594-68166674 5.72e-01 80 chr6:3177105-3177185 3.48e-04 66_[+1(5.13e-05)]_6 chr2:190075079-190075159 1.13e-03 21_[+2(1.88e-05)]_51 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n04.farnam.hpc.yale.internal ********************************************************************************