******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/IRF2.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2:4720683-4720763 1.0000 80 chr6:68071371-68071451 1.0000 80 chr2:6973368-6973448 1.0000 80 chr22:46454148-46454228 1.0000 80 chr16:56643605-56643685 1.0000 80 chr19:12425536-12425616 1.0000 80 chr1:67399928-67400008 1.0000 80 chr18:65085532-65085612 1.0000 80 chr8:129394299-129394379 1.0000 80 chr1:35540768-35540848 1.0000 80 chr14:64733118-64733198 1.0000 80 chr12:68630510-68630590 1.0000 80 chr3:182920268-182920348 1.0000 80 chr11:10324487-10324567 1.0000 80 chr14:77420100-77420180 1.0000 80 chr19:42553350-42553430 1.0000 80 chr4:133045183-133045263 1.0000 80 chr5:159028418-159028498 1.0000 80 chr5:179263878-179263958 1.0000 80 chr8:119933319-119933399 1.0000 80 chr7:156828145-156828225 1.0000 80 chr1:161014742-161014822 1.0000 80 chr3:88081074-88081154 1.0000 80 chr16:50732022-50732102 1.0000 80 chr13:44848666-44848746 1.0000 80 chr4:119771776-119771856 1.0000 80 chr3:62431144-62431224 1.0000 80 chr4:17387207-17387287 1.0000 80 chr5:176541714-176541794 1.0000 80 chr8:67447420-67447500 1.0000 80 chr3:169995772-169995852 1.0000 80 chr12:118498603-11849868 1.0000 80 chr2:166759591-166759671 1.0000 80 chr2:149310691-149310771 1.0000 80 chrX:154862266-154862346 1.0000 80 chr12:58359803-58359883 1.0000 80 chr20:5059260-5059340 1.0000 80 chr1:225127893-225127973 1.0000 80 chr2:102872852-102872932 1.0000 80 chr7:12297398-12297478 1.0000 80 chr4:10585741-10585821 1.0000 80 chr5:18746279-18746359 1.0000 80 chr8:22103577-22103657 1.0000 80 chr11:63304241-63304321 1.0000 80 chr12:97113957-97114037 1.0000 80 chr14:65548258-65548338 1.0000 80 chr8:29356971-29357051 1.0000 80 chr1:212016642-212016722 1.0000 80 chr13:31147042-31147122 1.0000 80 chrX:87155770-87155850 1.0000 80 chr21:36901616-36901696 1.0000 80 chr11:38637819-38637899 1.0000 80 chr10:77532175-77532255 1.0000 80 chr12:34279242-34279322 1.0000 80 chr19:44599473-44599553 1.0000 80 chr19:18197785-18197865 1.0000 80 chr17:26135156-26135236 1.0000 80 chr1:23445879-23445959 1.0000 80 chr5:114404368-114404448 1.0000 80 chr10:90734839-90734919 1.0000 80 chr4:164317087-164317167 1.0000 80 chr16:67970735-67970815 1.0000 80 chr7:33231061-33231141 1.0000 80 chr4:6753354-6753434 1.0000 80 chr2:168401434-168401514 1.0000 80 chr11:114217463-11421754 1.0000 80 chr9:14992173-14992253 1.0000 80 chr10:90844297-90844377 1.0000 80 chr7:36352304-36352384 1.0000 80 chr1:229439742-229439822 1.0000 80 chr5:5025939-5026019 1.0000 80 chr4:153477669-153477749 1.0000 80 chr17:1992936-1993016 1.0000 80 chr20:3913513-3913593 1.0000 80 chr9:96263707-96263787 1.0000 80 chr13:33105047-33105127 1.0000 80 chr17:77826756-77826836 1.0000 80 chr11:32017461-32017541 1.0000 80 chr3:121151152-121151232 1.0000 80 chr5:143571719-143571799 1.0000 80 chr2:85518638-85518718 1.0000 80 chr1:105249404-105249484 1.0000 80 chr3:118570846-118570926 1.0000 80 chr16:19106494-19106574 1.0000 80 chr22:30443455-30443535 1.0000 80 chr13:71865143-71865223 1.0000 80 chr15:51649325-51649405 1.0000 80 chr2:176432576-176432656 1.0000 80 chrX:119259473-119259553 1.0000 80 chr10:94462149-94462229 1.0000 80 chr9:110008687-110008767 1.0000 80 chr10:44118960-44119040 1.0000 80 chr7:113688489-113688569 1.0000 80 chr21:44821867-44821947 1.0000 80 chr9:33025766-33025846 1.0000 80 chr17:80377517-80377597 1.0000 80 chr11:61783211-61783291 1.0000 80 chr11:39392896-39392976 1.0000 80 chr17:43304593-43304673 1.0000 80 chr5:25569252-25569332 1.0000 80 chr13:28029596-28029676 1.0000 80 chr15:59274168-59274248 1.0000 80 chr1:33427989-33428069 1.0000 80 chr8:117396766-117396846 1.0000 80 chr2:220252318-220252398 1.0000 80 chr6:119788795-119788875 1.0000 80 chr8:117484981-117485061 1.0000 80 chr20:52384238-52384318 1.0000 80 chr2:108329429-108329509 1.0000 80 chr21:15975049-15975129 1.0000 80 chr22:36556818-36556898 1.0000 80 chr12:14369456-14369536 1.0000 80 chr10:17549236-17549316 1.0000 80 chr1:228328986-228329066 1.0000 80 chrX:120281428-120281508 1.0000 80 chr10:28467417-28467497 1.0000 80 chr5:81074984-81075064 1.0000 80 chr4:18059179-18059259 1.0000 80 chr3:183259643-183259723 1.0000 80 chr17:46590669-46590749 1.0000 80 chr3:138500132-138500212 1.0000 80 chr22:36044378-36044458 1.0000 80 chr6:169251982-169252062 1.0000 80 chr4:159530232-159530312 1.0000 80 chr16:86020820-86020900 1.0000 80 chr4:123578121-123578201 1.0000 80 chr8:103299683-103299763 1.0000 80 chr2:156403858-156403938 1.0000 80 chr10:15251086-15251166 1.0000 80 chr1:31960208-31960288 1.0000 80 chr16:18957415-18957495 1.0000 80 chr2:41942903-41942983 1.0000 80 chr11:46582395-46582475 1.0000 80 chr4:37074964-37075044 1.0000 80 chr3:118561299-118561379 1.0000 80 chr6:25139121-25139201 1.0000 80 chr2:159172697-159172777 1.0000 80 chr20:47717636-47717716 1.0000 80 chr6:143140899-143140979 1.0000 80 chr1:65534315-65534395 1.0000 80 chr6:36354321-36354401 1.0000 80 chr15:50540113-50540193 1.0000 80 chr8:18613392-18613472 1.0000 80 chr8:10488028-10488108 1.0000 80 chr18:36521324-36521404 1.0000 80 chr8:124049927-124050007 1.0000 80 chr22:36649100-36649180 1.0000 80 chr12:68856769-68856849 1.0000 80 chr1:46528425-46528505 1.0000 80 chr12:43089615-43089695 1.0000 80 chr6:28108096-28108176 1.0000 80 chr2:64994296-64994376 1.0000 80 chr1:153861118-153861198 1.0000 80 chr3:128523196-128523276 1.0000 80 chr9:80747717-80747797 1.0000 80 chr11:46237662-46237742 1.0000 80 chr1:89594655-89594735 1.0000 80 chr4:159870414-159870494 1.0000 80 chr5:89908886-89908966 1.0000 80 chr18:74920987-74921067 1.0000 80 chr6:33281797-33281877 1.0000 80 chr10:120891285-12089136 1.0000 80 chr18:53144914-53144994 1.0000 80 chr17:48498921-48499001 1.0000 80 chr17:77707017-77707097 1.0000 80 chr5:96212150-96212230 1.0000 80 chr3:40242408-40242488 1.0000 80 chr7:21392620-21392700 1.0000 80 chr1:83530435-83530515 1.0000 80 chr21:25260138-25260218 1.0000 80 chr9:94696408-94696488 1.0000 80 chr3:45185940-45186020 1.0000 80 chr8:123931376-123931456 1.0000 80 chr10:92980466-92980546 1.0000 80 chr1:193387727-193387807 1.0000 80 chr6:164817834-164817914 1.0000 80 chr4:89300512-89300592 1.0000 80 chr2:108888489-108888569 1.0000 80 chr15:97433361-97433441 1.0000 80 chr12:24948804-24948884 1.0000 80 chr17:62092425-62092505 1.0000 80 chr2:113525747-113525827 1.0000 80 chrX:40504126-40504206 1.0000 80 chr1:155607345-155607425 1.0000 80 chr1:42357330-42357410 1.0000 80 chr3:122399619-122399699 1.0000 80 chr14:86400965-86401045 1.0000 80 chr12:108496288-10849636 1.0000 80 chr8:145060604-145060684 1.0000 80 chr3:88238569-88238649 1.0000 80 chr1:118277816-118277896 1.0000 80 chr3:141405705-141405785 1.0000 80 chr1:179098955-179099035 1.0000 80 chr14:63920465-63920545 1.0000 80 chr22:36552969-36553049 1.0000 80 chr4:111040765-111040845 1.0000 80 chr8:81344846-81344926 1.0000 80 chr11:102183610-10218369 1.0000 80 chr19:52333602-52333682 1.0000 80 chr15:56760886-56760966 1.0000 80 chr21:37632923-37633003 1.0000 80 chr11:59434578-59434658 1.0000 80 chr17:75606383-75606463 1.0000 80 chr11:20382353-20382433 1.0000 80 chr4:186530465-186530545 1.0000 80 chr1:248070101-248070181 1.0000 80 chr11:122820165-12282024 1.0000 80 chr2:65126220-65126300 1.0000 80 chr2:9971068-9971148 1.0000 80 chr5:64778714-64778794 1.0000 80 chr7:121081309-121081389 1.0000 80 chr8:68418174-68418254 1.0000 80 chr7:17182242-17182322 1.0000 80 chr9:114857339-114857419 1.0000 80 chr2:233228773-233228853 1.0000 80 chr12:10517673-10517753 1.0000 80 chr1:230305609-230305689 1.0000 80 chr15:51199237-51199317 1.0000 80 chr2:226329513-226329593 1.0000 80 chr20:61436144-61436224 1.0000 80 chr18:2641750-2641830 1.0000 80 chr3:3214476-3214556 1.0000 80 chrX:146957501-146957581 1.0000 80 chr6:2369949-2370029 1.0000 80 chr5:176727410-176727490 1.0000 80 chr1:38993180-38993260 1.0000 80 chr19:47217864-47217944 1.0000 80 chr8:129389412-129389492 1.0000 80 chr2:109591219-109591299 1.0000 80 chr3:58311335-58311415 1.0000 80 chr11:34548122-34548202 1.0000 80 chr7:103452549-103452629 1.0000 80 chr7:149019374-149019454 1.0000 80 chr1:170137646-170137726 1.0000 80 chr4:185189236-185189316 1.0000 80 chr3:19188976-19189056 1.0000 80 chr2:157520438-157520518 1.0000 80 chr2:85116095-85116175 1.0000 80 chr13:28278949-28279029 1.0000 80 chr6:33546460-33546540 1.0000 80 chr16:89328157-89328237 1.0000 80 chr8:71126848-71126928 1.0000 80 chr7:92747376-92747456 1.0000 80 chr11:796324-796404 1.0000 80 chr2:133058324-133058404 1.0000 80 chr13:41558936-41559016 1.0000 80 chr6:32811783-32811863 1.0000 80 chr5:130172455-130172535 1.0000 80 chr14:24605377-24605457 1.0000 80 chr5:115617121-115617201 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_IRF2/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/IRF2.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.282 C 0.215 G 0.218 T 0.285 Background letter frequencies (from file dataset with add-one prior applied): A 0.282 C 0.215 G 0.218 T 0.285 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TTTCACTT MEME-1 width = 8 sites = 141 llr = 1263 E-value = 6.5e-190 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::::8::: pos.-specific C :::a:8:: probability G ::::11:: matrix T aaa:11aa bits 2.2 2.0 * 1.8 ** * ** 1.6 **** ** Relative 1.3 **** ** Entropy 1.1 ******** (12.9 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTCACTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:115617121-115617201 57 2.45e-05 TTCACTTTCG TTTCACTT TGCATTGTTT chr5:130172455-130172535 49 2.45e-05 GCATTTTCAC TTTCACTT TTGTCAATGC chr13:41558936-41559016 42 2.45e-05 TAAATTTAAG TTTCACTT TCTTTTCCAC chr2:133058324-133058404 22 2.45e-05 acagcagcag tttcactt tctctttact chr11:796324-796404 11 2.45e-05 GCACTTTCTC TTTCACTT TGGGCAAGCA chr6:33546460-33546540 62 2.45e-05 ATGTCAGCTG TTTCACTT TCAGTTTGCA chr2:157520438-157520518 52 2.45e-05 GAAACAAAGC TTTCACTT TCCTTTTGGG chr1:170137646-170137726 22 2.45e-05 AGGTATTTGG TTTCACTT TCTATTTTGG chr7:103452549-103452629 25 2.45e-05 CCGAGACGAC TTTCACTT TCACTCCTTA chr11:34548122-34548202 52 2.45e-05 agggtcccta tttcactt tcgttttctt chr3:3214476-3214556 37 2.45e-05 TTCCAATTGC TTTCACTT TCACTATCTC chr7:17182242-17182322 52 2.45e-05 GTGTTTTCAC TTTCACTT TCACATTCTT chr8:68418174-68418254 38 2.45e-05 atccttcgac tttcactt tcattatcag chr7:121081309-121081389 59 2.45e-05 GTATTCTTAC TTTCACTT TCTCTTTTTT chr5:64778714-64778794 20 2.45e-05 AATGTAGCAC TTTCACTT TCATTTGCTG chr2:65126220-65126300 53 2.45e-05 actcactcac tttcactt tcctttttgc chr4:186530465-186530545 28 2.45e-05 AGGTTTCCAC TTTCACTT TCTGTTATGC chr11:59434578-59434658 41 2.45e-05 ATCATCTTTC TTTCACTT TCTATTTCCT chr15:56760886-56760966 31 2.45e-05 CGTCTCTCAC TTTCACTT TTGCTCTTGC chr11:102183610-10218369 41 2.45e-05 AAGATTTCAC TTTCACTT TCAGTTCTAG chr4:111040765-111040845 53 2.45e-05 TCCCACAGAC TTTCACTT TCTTTTTTCT chr22:36552969-36553049 31 2.45e-05 CCAGCTTCAG TTTCACTT TCAGTTGAGG chr1:179098955-179099035 37 2.45e-05 GCACTTTTAC TTTCACTT TTAATTCTGT chr1:118277816-118277896 37 2.45e-05 AGCATTCCTC TTTCACTT TCATTTTGTG chr14:86400965-86401045 53 2.45e-05 ttacttttgc tttcactt taacaaatct chr2:113525747-113525827 51 2.45e-05 taagtttcac tttcactt agtatgctgt chr12:24948804-24948884 41 2.45e-05 ctagtttcac tttcactt gtgtgtgcgt chr15:97433361-97433441 32 2.45e-05 tctcattctc tttcactt tctctttctc chr10:92980466-92980546 60 2.45e-05 GCTGTTTCTG TTTCACTT TCCTTCACTC chr8:123931376-123931456 45 2.45e-05 CCAGTTCTTC TTTCACTT TCATTTTGCA chr21:25260138-25260218 26 2.45e-05 acctttccag tttcaCTT TCACATTGAG chr1:83530435-83530515 47 2.45e-05 TTACTTTCAC TTTCACTT TCTATGAGAC chr17:48498921-48499001 22 2.45e-05 AGTTCCTTAT TTTCACTT TCAGTTTGAG chr18:53144914-53144994 28 2.45e-05 CTTCCCTTAC TTTCACTT TCAGGTTCTA chr6:33281797-33281877 69 2.45e-05 CTCCTTTCAC TTTCACTT TCCT chr18:74920987-74921067 40 2.45e-05 taccttccag tttcactt tctctttcct chr5:89908886-89908966 31 2.45e-05 CATGCTGTAA TTTCACTT TCACTCTGTC chr4:159870414-159870494 36 2.45e-05 tagctttctc tttcactt tcaaaagtgt chr9:80747717-80747797 62 2.45e-05 CAGTTAGCAC TTTCACTT TCATTTTTCT chr3:128523196-128523276 63 2.45e-05 GCTAATACAC TTTCACTT TCTCTTTGCT chr12:43089615-43089695 55 2.45e-05 tttctatttc tttcactt ttctatctct chr22:36649100-36649180 20 2.45e-05 AAGTTGTGAC TTTCACTT TCCCTTTCGA chr8:10488028-10488108 33 2.45e-05 AGGGTTTCAC TTTCACTT TCTGTTTCCC chr1:65534315-65534395 50 2.45e-05 CTTCAGGCAC TTTCACTT TTGTTTTTCG chr6:143140899-143140979 54 2.45e-05 GATAGGTGAG TTTCACTT TCTGTTTGTC chr20:47717636-47717716 35 2.45e-05 TGGGTTCTGC TTTCACTT TCACATTGTT chr3:118561299-118561379 40 2.45e-05 ttcgctttac tttcactt tcgctttaat chr16:18957415-18957495 37 2.45e-05 TCAGGCTTGG TTTCACTT TCTAAATTGC chr2:156403858-156403938 50 2.45e-05 ACACTTTCAC TTTCACTT TCCAAGTCAG chr16:86020820-86020900 60 2.45e-05 CTACTTTCTC TTTCACTT TCTTTCTTAT chr4:159530232-159530312 47 2.45e-05 gggtccccac tttcactt tcacttcttc chrX:120281428-120281508 41 2.45e-05 ACATGCACAG TTTCACTT TCATTTGGTA chr12:14369456-14369536 70 2.45e-05 ttactttcac tttcactt taa chr21:15975049-15975129 64 2.45e-05 GGCCGTTTCC TTTCACTT TCACTCCTA chr15:59274168-59274248 64 2.45e-05 gaatggcagc tttcactt tcatttttc chr11:39392896-39392976 62 2.45e-05 ttcgttttac tttcactt tcgctttaat chrX:119259473-119259553 53 2.45e-05 GGACTGCTGC TTTCACTT TCACTCTTGC chr15:51649325-51649405 70 2.45e-05 ttcctttcac tttcactt taa chr3:121151152-121151232 47 2.45e-05 CTATTTTCAC TTTCACTT TCAATTTCAC chr17:77826756-77826836 31 2.45e-05 tccttcgttg tttcactt tcgttttact chr13:33105047-33105127 36 2.45e-05 atgctttctc tttcactt tgaaagaaat chr9:96263707-96263787 22 2.45e-05 CAGAATTTAG TTTCACTT TCATTTTCAC chr20:3913513-3913593 36 2.45e-05 ATAAAGACAC TTTCACTT TCAGTTTCGG chr1:229439742-229439822 38 2.45e-05 ATATTTTTCC TTTCACTT TCGGTTTAAA chr7:33231061-33231141 26 2.45e-05 TTGCTTTTGG TTTCACTT TCTCTCCTAG chr4:164317087-164317167 29 2.45e-05 CATTCTCTCC TTTCACTT TCTGTTTGTC chr12:34279242-34279322 57 2.45e-05 tgcggtgcac tttcactt ttacttttac chr11:38637819-38637899 71 2.45e-05 aatagggcag tttcactt tc chr21:36901616-36901696 37 2.45e-05 CTCCTTTCAC TTTCACTT CGAATTGATT chrX:87155770-87155850 32 2.45e-05 tttgctttac tttcactt tcactttaat chr13:31147042-31147122 45 2.45e-05 GGGCTGACAG TTTCACTT TCAGTTTTCA chr1:212016642-212016722 32 2.45e-05 caactcttcc tttcactt tcacttagag chr12:97113957-97114037 30 2.45e-05 TGACGCTTGC TTTCACTT TCCTTTTCGT chr4:10585741-10585821 45 2.45e-05 TATTTCCCAC TTTCACTT TTGCTTTTGC chr2:102872852-102872932 42 2.45e-05 TTACTTTCAC TTTCACTT CTCCCTCCTG chr12:58359803-58359883 62 2.45e-05 ttactttcac tttcactt taataaatct chr3:169995772-169995852 62 2.45e-05 tttctttcac tttcactt tgtgagctac chr8:67447420-67447500 68 2.45e-05 catttcacac tttcactt cattt chr5:176541714-176541794 48 2.45e-05 GGGCAAAGAC TTTCACTT TTGCTTTCTA chr4:119771776-119771856 56 2.45e-05 AAAACGTTTG TTTCACTT TCAATTTGTT chr16:50732022-50732102 34 2.45e-05 GCCTACACCC TTTCACTT TCGTTTCTTC chr3:88081074-88081154 29 2.45e-05 TTGCAATTAG TTTCACTT TCAGTTTCTC chr8:119933319-119933399 53 2.45e-05 TCACTTTCAC TTTCACTT TTAATTTTTC chr5:179263878-179263958 37 2.45e-05 GCCTAATGGC TTTCACTT TCTCTTTTGT chr14:77420100-77420180 52 2.45e-05 ACCGGGCCAC TTTCACTT TCTCTTTTCT chr14:24605377-24605457 31 4.35e-05 GCCCTACCGC TTTCGCTT TCCCTTCGCG chr16:89328157-89328237 56 4.35e-05 ctgctgtagc tttcgctt tctgtttgca chr20:61436144-61436224 27 4.35e-05 ctgctttcgg tttcgctt ccgcctccag chr18:36521324-36521404 46 4.35e-05 tttgctttac tttcgctt ttgctttact chr10:17549236-17549316 64 4.35e-05 tagcttccac tttcgctt tcttggaag chr6:119788795-119788875 24 4.35e-05 GGTTTACTAC TTTCGCTT TCAGTTCTTT chr2:220252318-220252398 50 4.35e-05 GGGCTTTCGG TTTCGCTT TGGGTCAGGC chr9:33025766-33025846 27 4.35e-05 CGGCTTTTGG TTTCGCTT TCTCTGTTTC chr3:118570846-118570926 16 4.35e-05 ttacttttgc tttcgctt actttcgctt chr4:153477669-153477749 42 4.35e-05 ttgtttcgac tttcgctt tcgtttttct chr16:67970735-67970815 30 4.35e-05 TACTTCCTGC TTTCGCTT TCGCCTTTAC chr7:92747376-92747456 43 6.83e-05 ATAGGTTTGG TTTCAGTT TCATTTCTCA chr3:58311335-58311415 54 6.83e-05 GATTTCTCAC TTTCAGTT TCCTTTCCTT chr1:38993180-38993260 52 6.83e-05 ctcagcaagg tttcagtt tccttttcta chr5:176727410-176727490 46 6.83e-05 GAGTGGCTGG TTTCAGTT TCAGTCTCCC chr2:226329513-226329593 58 6.83e-05 AGTCAGGCAG TTTCAGTT TCATTTTTAT chr2:9971068-9971148 47 6.83e-05 GTGGTTTCAG TTTCAGTT ATGGGCAGAC chr1:46528425-46528505 52 6.83e-05 tcggtttcgg tttcagtt ttggttGGTG chr6:25139121-25139201 63 6.83e-05 TTTGTGGCAC TTTCAGTT TCATTTTTAG chr2:41942903-41942983 28 6.83e-05 CCCAGTCTCA TTTCAGTT TCAGTTTCAT chr5:143571719-143571799 26 6.83e-05 TCAGGGTGAC TTTCAGTT TCTCTTCTTC chr17:26135156-26135236 47 6.83e-05 ttacttttgg tttcagtt tgcttatctg chr14:65548258-65548338 20 6.83e-05 AACCCTGGAC TTTCAGTT TCTGTTTTCT chr16:56643605-56643685 22 6.83e-05 ACATGATCAC TTTCAGTT TCACGTCAAA chr7:149019374-149019454 38 1.01e-04 ttacttttgg tttcattt tggtcaggtc chr21:37632923-37633003 40 1.01e-04 TTGGTTTTAC TTTCATTT TCAGAAATCG chr14:63920465-63920545 38 1.01e-04 GCTTGTATTC TTTCATTT TAAGATCAGA chr10:15251086-15251166 55 1.01e-04 TTGGTTTTGG TTTCATTT TCTTGGGTGC chr4:123578121-123578201 44 1.01e-04 ttgtagccac tttcattt tcggttttcc chr6:169251982-169252062 70 1.01e-04 GCCAGATAAA TTTCATTT GCA chr10:77532175-77532255 33 1.01e-04 GAAGTTTCGG TTTCATTT TGCAGTTGCT chr7:156828145-156828225 49 1.01e-04 ttggtttcaa tttcattt tcctagtggc chr12:108496288-10849636 59 1.26e-04 acacttctac tttctctt ttgaaatctt chr1:42357330-42357410 35 1.26e-04 GGTAACTCAC TTTCTCTT TCTGTTCTGA chr15:50540113-50540193 25 1.26e-04 CTTGATTTAC TTTCTCTT TCTCTTTCCT chr3:183259643-183259723 54 1.26e-04 GTCAGACCAC TTTCTCTT TCTCTTTCCA chr5:25569252-25569332 62 1.44e-04 aaagtaaagt ttccactt ggaacgggac chr11:32017461-32017541 51 1.44e-04 TCAAGGCTGC TTCCACTT TCGTTTTCTA chr5:5025939-5026019 62 1.44e-04 aaagtaaagc ttccactt ggtggaaggg chr18:2641750-2641830 55 1.63e-04 CAAACCACAG TTTCGGTT TCTTTTCTGA chr4:89300512-89300592 52 1.63e-04 CTCGGATTTG TTTCGGTT TCCAATTCAA chr6:164817834-164817914 58 1.82e-04 aacCATGCAA TCTCACTT TTAGAAGGTA chr3:19188976-19189056 62 2.07e-04 GAGAGACCAC TTTCGTTT TCTGAGACGC chr12:68856769-68856849 59 2.07e-04 acacttttac tttcgttt tagctattac chr22:46454148-46454228 56 2.07e-04 AGATGCCCAG TTTCGTTT TCTATTTGAA chr8:103299683-103299763 65 2.32e-04 TCACTATCAC TTTCTGTT TCAGCTGC chr1:35540768-35540848 54 2.32e-04 ttacttttgg tttctgtt tgcatagaaa chr19:52333602-52333682 40 2.97e-04 caagggtcac ttccagtt tctttctcta chr6:28108096-28108176 45 2.97e-04 CACCAGTTAC TTCCAGTT ACCATCCCAG chr17:46590669-46590749 69 2.97e-04 CTCATGAGGC TTTAACTT GGTC chr6:36354321-36354401 49 3.16e-04 TCAAGTCATT TTTCACTC TAGGATTGTC chr9:94696408-94696488 46 3.49e-04 TCAGTTTTGG TTTCTTTT TCAAATCATC chr13:28029596-28029676 69 3.49e-04 GCTCTTAGTT TTTCTTTT TTTT chr2:64994296-64994376 51 3.92e-04 ATAATCAGGC TTCCTCTT CAGTGCTGAC chr1:230305609-230305689 4 4.89e-04 TCC TCTCATTT TCGCAGCATT chr1:23445879-23445959 53 4.89e-04 agatcttagt tttagctt taaaaataac -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:115617121-115617201 2.5e-05 56_[+1]_16 chr5:130172455-130172535 2.5e-05 48_[+1]_24 chr13:41558936-41559016 2.5e-05 41_[+1]_31 chr2:133058324-133058404 2.5e-05 21_[+1]_51 chr11:796324-796404 2.5e-05 10_[+1]_62 chr6:33546460-33546540 2.5e-05 61_[+1]_11 chr2:157520438-157520518 2.5e-05 51_[+1]_21 chr1:170137646-170137726 2.5e-05 21_[+1]_51 chr7:103452549-103452629 2.5e-05 24_[+1]_48 chr11:34548122-34548202 2.5e-05 51_[+1]_21 chr3:3214476-3214556 2.5e-05 36_[+1]_36 chr7:17182242-17182322 2.5e-05 51_[+1]_21 chr8:68418174-68418254 2.5e-05 37_[+1]_35 chr7:121081309-121081389 2.5e-05 58_[+1]_14 chr5:64778714-64778794 2.5e-05 19_[+1]_53 chr2:65126220-65126300 2.5e-05 52_[+1]_20 chr4:186530465-186530545 2.5e-05 27_[+1]_45 chr11:59434578-59434658 2.5e-05 40_[+1]_32 chr15:56760886-56760966 2.5e-05 30_[+1]_42 chr11:102183610-10218369 2.5e-05 40_[+1]_32 chr4:111040765-111040845 2.5e-05 52_[+1]_20 chr22:36552969-36553049 2.5e-05 30_[+1]_42 chr1:179098955-179099035 2.5e-05 36_[+1]_36 chr1:118277816-118277896 2.5e-05 36_[+1]_36 chr14:86400965-86401045 2.5e-05 52_[+1]_20 chr2:113525747-113525827 2.5e-05 50_[+1]_22 chr12:24948804-24948884 2.5e-05 40_[+1]_32 chr15:97433361-97433441 2.5e-05 31_[+1]_41 chr10:92980466-92980546 2.5e-05 59_[+1]_13 chr8:123931376-123931456 2.5e-05 44_[+1]_28 chr21:25260138-25260218 2.5e-05 25_[+1]_47 chr1:83530435-83530515 2.5e-05 46_[+1]_26 chr17:48498921-48499001 2.5e-05 21_[+1]_51 chr18:53144914-53144994 2.5e-05 27_[+1]_45 chr6:33281797-33281877 2.5e-05 68_[+1]_4 chr18:74920987-74921067 2.5e-05 39_[+1]_33 chr5:89908886-89908966 2.5e-05 30_[+1]_42 chr4:159870414-159870494 2.5e-05 35_[+1]_37 chr9:80747717-80747797 2.5e-05 61_[+1]_11 chr3:128523196-128523276 2.5e-05 62_[+1]_10 chr12:43089615-43089695 2.5e-05 54_[+1]_18 chr22:36649100-36649180 2.5e-05 19_[+1]_53 chr8:10488028-10488108 2.5e-05 32_[+1]_40 chr1:65534315-65534395 2.5e-05 49_[+1]_23 chr6:143140899-143140979 2.5e-05 53_[+1]_19 chr20:47717636-47717716 2.5e-05 34_[+1]_38 chr3:118561299-118561379 2.5e-05 39_[+1]_33 chr16:18957415-18957495 2.5e-05 36_[+1]_36 chr2:156403858-156403938 2.5e-05 49_[+1]_23 chr16:86020820-86020900 2.5e-05 59_[+1]_13 chr4:159530232-159530312 2.5e-05 46_[+1]_26 chrX:120281428-120281508 2.5e-05 40_[+1]_32 chr12:14369456-14369536 2.5e-05 69_[+1]_3 chr21:15975049-15975129 2.5e-05 63_[+1]_9 chr15:59274168-59274248 2.5e-05 63_[+1]_9 chr11:39392896-39392976 2.5e-05 61_[+1]_11 chrX:119259473-119259553 2.5e-05 52_[+1]_20 chr15:51649325-51649405 2.5e-05 69_[+1]_3 chr3:121151152-121151232 2.5e-05 46_[+1]_26 chr17:77826756-77826836 2.5e-05 30_[+1]_42 chr13:33105047-33105127 2.5e-05 35_[+1]_37 chr9:96263707-96263787 2.5e-05 21_[+1]_51 chr20:3913513-3913593 2.5e-05 35_[+1]_37 chr1:229439742-229439822 2.5e-05 37_[+1]_35 chr7:33231061-33231141 2.5e-05 25_[+1]_47 chr4:164317087-164317167 2.5e-05 28_[+1]_44 chr12:34279242-34279322 2.5e-05 56_[+1]_16 chr11:38637819-38637899 2.5e-05 70_[+1]_2 chr21:36901616-36901696 2.5e-05 36_[+1]_36 chrX:87155770-87155850 2.5e-05 31_[+1]_41 chr13:31147042-31147122 2.5e-05 44_[+1]_28 chr1:212016642-212016722 2.5e-05 31_[+1]_41 chr12:97113957-97114037 2.5e-05 29_[+1]_43 chr4:10585741-10585821 2.5e-05 44_[+1]_28 chr2:102872852-102872932 2.5e-05 41_[+1]_31 chr12:58359803-58359883 2.5e-05 61_[+1]_11 chr3:169995772-169995852 2.5e-05 61_[+1]_11 chr8:67447420-67447500 2.5e-05 67_[+1]_5 chr5:176541714-176541794 2.5e-05 47_[+1]_25 chr4:119771776-119771856 2.5e-05 55_[+1]_17 chr16:50732022-50732102 2.5e-05 33_[+1]_39 chr3:88081074-88081154 2.5e-05 28_[+1]_44 chr8:119933319-119933399 2.5e-05 52_[+1]_20 chr5:179263878-179263958 2.5e-05 36_[+1]_36 chr14:77420100-77420180 2.5e-05 51_[+1]_21 chr14:24605377-24605457 4.3e-05 30_[+1]_42 chr16:89328157-89328237 4.3e-05 55_[+1]_17 chr20:61436144-61436224 4.3e-05 26_[+1]_46 chr18:36521324-36521404 4.3e-05 45_[+1]_27 chr10:17549236-17549316 4.3e-05 63_[+1]_9 chr6:119788795-119788875 4.3e-05 23_[+1]_49 chr2:220252318-220252398 4.3e-05 49_[+1]_23 chr9:33025766-33025846 4.3e-05 26_[+1]_46 chr3:118570846-118570926 4.3e-05 15_[+1]_57 chr4:153477669-153477749 4.3e-05 41_[+1]_31 chr16:67970735-67970815 4.3e-05 29_[+1]_43 chr7:92747376-92747456 6.8e-05 42_[+1]_30 chr3:58311335-58311415 6.8e-05 53_[+1]_19 chr1:38993180-38993260 6.8e-05 51_[+1]_21 chr5:176727410-176727490 6.8e-05 45_[+1]_27 chr2:226329513-226329593 6.8e-05 57_[+1]_15 chr2:9971068-9971148 6.8e-05 46_[+1]_26 chr1:46528425-46528505 6.8e-05 51_[+1]_21 chr6:25139121-25139201 6.8e-05 62_[+1]_10 chr2:41942903-41942983 6.8e-05 27_[+1]_45 chr5:143571719-143571799 6.8e-05 25_[+1]_47 chr17:26135156-26135236 6.8e-05 46_[+1]_26 chr14:65548258-65548338 6.8e-05 19_[+1]_53 chr16:56643605-56643685 6.8e-05 21_[+1]_51 chr7:149019374-149019454 0.0001 37_[+1]_35 chr21:37632923-37633003 0.0001 39_[+1]_33 chr14:63920465-63920545 0.0001 37_[+1]_35 chr10:15251086-15251166 0.0001 54_[+1]_18 chr4:123578121-123578201 0.0001 43_[+1]_29 chr6:169251982-169252062 0.0001 69_[+1]_3 chr10:77532175-77532255 0.0001 32_[+1]_40 chr7:156828145-156828225 0.0001 48_[+1]_24 chr12:108496288-10849636 0.00013 58_[+1]_14 chr1:42357330-42357410 0.00013 34_[+1]_38 chr15:50540113-50540193 0.00013 24_[+1]_48 chr3:183259643-183259723 0.00013 53_[+1]_19 chr5:25569252-25569332 0.00014 61_[+1]_11 chr11:32017461-32017541 0.00014 50_[+1]_22 chr5:5025939-5026019 0.00014 61_[+1]_11 chr18:2641750-2641830 0.00016 54_[+1]_18 chr4:89300512-89300592 0.00016 51_[+1]_21 chr6:164817834-164817914 0.00018 57_[+1]_15 chr3:19188976-19189056 0.00021 61_[+1]_11 chr12:68856769-68856849 0.00021 58_[+1]_14 chr22:46454148-46454228 0.00021 55_[+1]_17 chr8:103299683-103299763 0.00023 64_[+1]_8 chr1:35540768-35540848 0.00023 53_[+1]_19 chr19:52333602-52333682 0.0003 39_[+1]_33 chr6:28108096-28108176 0.0003 44_[+1]_28 chr17:46590669-46590749 0.0003 68_[+1]_4 chr6:36354321-36354401 0.00032 48_[+1]_24 chr9:94696408-94696488 0.00035 45_[+1]_27 chr13:28029596-28029676 0.00035 68_[+1]_4 chr2:64994296-64994376 0.00039 50_[+1]_22 chr1:230305609-230305689 0.00049 3_[+1]_69 chr1:23445879-23445959 0.00049 52_[+1]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTCACTT width=8 seqs=141 chr5:115617121-115617201 ( 57) TTTCACTT 1 chr5:130172455-130172535 ( 49) TTTCACTT 1 chr13:41558936-41559016 ( 42) TTTCACTT 1 chr2:133058324-133058404 ( 22) TTTCACTT 1 chr11:796324-796404 ( 11) TTTCACTT 1 chr6:33546460-33546540 ( 62) TTTCACTT 1 chr2:157520438-157520518 ( 52) TTTCACTT 1 chr1:170137646-170137726 ( 22) TTTCACTT 1 chr7:103452549-103452629 ( 25) TTTCACTT 1 chr11:34548122-34548202 ( 52) TTTCACTT 1 chr3:3214476-3214556 ( 37) TTTCACTT 1 chr7:17182242-17182322 ( 52) TTTCACTT 1 chr8:68418174-68418254 ( 38) TTTCACTT 1 chr7:121081309-121081389 ( 59) TTTCACTT 1 chr5:64778714-64778794 ( 20) TTTCACTT 1 chr2:65126220-65126300 ( 53) TTTCACTT 1 chr4:186530465-186530545 ( 28) TTTCACTT 1 chr11:59434578-59434658 ( 41) TTTCACTT 1 chr15:56760886-56760966 ( 31) TTTCACTT 1 chr11:102183610-10218369 ( 41) TTTCACTT 1 chr4:111040765-111040845 ( 53) TTTCACTT 1 chr22:36552969-36553049 ( 31) TTTCACTT 1 chr1:179098955-179099035 ( 37) TTTCACTT 1 chr1:118277816-118277896 ( 37) TTTCACTT 1 chr14:86400965-86401045 ( 53) TTTCACTT 1 chr2:113525747-113525827 ( 51) TTTCACTT 1 chr12:24948804-24948884 ( 41) TTTCACTT 1 chr15:97433361-97433441 ( 32) TTTCACTT 1 chr10:92980466-92980546 ( 60) TTTCACTT 1 chr8:123931376-123931456 ( 45) TTTCACTT 1 chr21:25260138-25260218 ( 26) TTTCACTT 1 chr1:83530435-83530515 ( 47) TTTCACTT 1 chr17:48498921-48499001 ( 22) TTTCACTT 1 chr18:53144914-53144994 ( 28) TTTCACTT 1 chr6:33281797-33281877 ( 69) TTTCACTT 1 chr18:74920987-74921067 ( 40) TTTCACTT 1 chr5:89908886-89908966 ( 31) TTTCACTT 1 chr4:159870414-159870494 ( 36) TTTCACTT 1 chr9:80747717-80747797 ( 62) TTTCACTT 1 chr3:128523196-128523276 ( 63) TTTCACTT 1 chr12:43089615-43089695 ( 55) TTTCACTT 1 chr22:36649100-36649180 ( 20) TTTCACTT 1 chr8:10488028-10488108 ( 33) TTTCACTT 1 chr1:65534315-65534395 ( 50) TTTCACTT 1 chr6:143140899-143140979 ( 54) TTTCACTT 1 chr20:47717636-47717716 ( 35) TTTCACTT 1 chr3:118561299-118561379 ( 40) TTTCACTT 1 chr16:18957415-18957495 ( 37) TTTCACTT 1 chr2:156403858-156403938 ( 50) TTTCACTT 1 chr16:86020820-86020900 ( 60) TTTCACTT 1 chr4:159530232-159530312 ( 47) TTTCACTT 1 chrX:120281428-120281508 ( 41) TTTCACTT 1 chr12:14369456-14369536 ( 70) TTTCACTT 1 chr21:15975049-15975129 ( 64) TTTCACTT 1 chr15:59274168-59274248 ( 64) TTTCACTT 1 chr11:39392896-39392976 ( 62) TTTCACTT 1 chrX:119259473-119259553 ( 53) TTTCACTT 1 chr15:51649325-51649405 ( 70) TTTCACTT 1 chr3:121151152-121151232 ( 47) TTTCACTT 1 chr17:77826756-77826836 ( 31) TTTCACTT 1 chr13:33105047-33105127 ( 36) TTTCACTT 1 chr9:96263707-96263787 ( 22) TTTCACTT 1 chr20:3913513-3913593 ( 36) TTTCACTT 1 chr1:229439742-229439822 ( 38) TTTCACTT 1 chr7:33231061-33231141 ( 26) TTTCACTT 1 chr4:164317087-164317167 ( 29) TTTCACTT 1 chr12:34279242-34279322 ( 57) TTTCACTT 1 chr11:38637819-38637899 ( 71) TTTCACTT 1 chr21:36901616-36901696 ( 37) TTTCACTT 1 chrX:87155770-87155850 ( 32) TTTCACTT 1 chr13:31147042-31147122 ( 45) TTTCACTT 1 chr1:212016642-212016722 ( 32) TTTCACTT 1 chr12:97113957-97114037 ( 30) TTTCACTT 1 chr4:10585741-10585821 ( 45) TTTCACTT 1 chr2:102872852-102872932 ( 42) TTTCACTT 1 chr12:58359803-58359883 ( 62) TTTCACTT 1 chr3:169995772-169995852 ( 62) TTTCACTT 1 chr8:67447420-67447500 ( 68) TTTCACTT 1 chr5:176541714-176541794 ( 48) TTTCACTT 1 chr4:119771776-119771856 ( 56) TTTCACTT 1 chr16:50732022-50732102 ( 34) TTTCACTT 1 chr3:88081074-88081154 ( 29) TTTCACTT 1 chr8:119933319-119933399 ( 53) TTTCACTT 1 chr5:179263878-179263958 ( 37) TTTCACTT 1 chr14:77420100-77420180 ( 52) TTTCACTT 1 chr14:24605377-24605457 ( 31) TTTCGCTT 1 chr16:89328157-89328237 ( 56) TTTCGCTT 1 chr20:61436144-61436224 ( 27) TTTCGCTT 1 chr18:36521324-36521404 ( 46) TTTCGCTT 1 chr10:17549236-17549316 ( 64) TTTCGCTT 1 chr6:119788795-119788875 ( 24) TTTCGCTT 1 chr2:220252318-220252398 ( 50) TTTCGCTT 1 chr9:33025766-33025846 ( 27) TTTCGCTT 1 chr3:118570846-118570926 ( 16) TTTCGCTT 1 chr4:153477669-153477749 ( 42) TTTCGCTT 1 chr16:67970735-67970815 ( 30) TTTCGCTT 1 chr7:92747376-92747456 ( 43) TTTCAGTT 1 chr3:58311335-58311415 ( 54) TTTCAGTT 1 chr1:38993180-38993260 ( 52) TTTCAGTT 1 chr5:176727410-176727490 ( 46) TTTCAGTT 1 chr2:226329513-226329593 ( 58) TTTCAGTT 1 chr2:9971068-9971148 ( 47) TTTCAGTT 1 chr1:46528425-46528505 ( 52) TTTCAGTT 1 chr6:25139121-25139201 ( 63) TTTCAGTT 1 chr2:41942903-41942983 ( 28) TTTCAGTT 1 chr5:143571719-143571799 ( 26) TTTCAGTT 1 chr17:26135156-26135236 ( 47) TTTCAGTT 1 chr14:65548258-65548338 ( 20) TTTCAGTT 1 chr16:56643605-56643685 ( 22) TTTCAGTT 1 chr7:149019374-149019454 ( 38) TTTCATTT 1 chr21:37632923-37633003 ( 40) TTTCATTT 1 chr14:63920465-63920545 ( 38) TTTCATTT 1 chr10:15251086-15251166 ( 55) TTTCATTT 1 chr4:123578121-123578201 ( 44) TTTCATTT 1 chr6:169251982-169252062 ( 70) TTTCATTT 1 chr10:77532175-77532255 ( 33) TTTCATTT 1 chr7:156828145-156828225 ( 49) TTTCATTT 1 chr12:108496288-10849636 ( 59) TTTCTCTT 1 chr1:42357330-42357410 ( 35) TTTCTCTT 1 chr15:50540113-50540193 ( 25) TTTCTCTT 1 chr3:183259643-183259723 ( 54) TTTCTCTT 1 chr5:25569252-25569332 ( 62) TTCCACTT 1 chr11:32017461-32017541 ( 51) TTCCACTT 1 chr5:5025939-5026019 ( 62) TTCCACTT 1 chr18:2641750-2641830 ( 55) TTTCGGTT 1 chr4:89300512-89300592 ( 52) TTTCGGTT 1 chr6:164817834-164817914 ( 58) TCTCACTT 1 chr3:19188976-19189056 ( 62) TTTCGTTT 1 chr12:68856769-68856849 ( 59) TTTCGTTT 1 chr22:46454148-46454228 ( 56) TTTCGTTT 1 chr8:103299683-103299763 ( 65) TTTCTGTT 1 chr1:35540768-35540848 ( 54) TTTCTGTT 1 chr19:52333602-52333682 ( 40) TTCCAGTT 1 chr6:28108096-28108176 ( 45) TTCCAGTT 1 chr17:46590669-46590749 ( 69) TTTAACTT 1 chr6:36354321-36354401 ( 49) TTTCACTC 1 chr9:94696408-94696488 ( 46) TTTCTTTT 1 chr13:28029596-28029676 ( 69) TTTCTTTT 1 chr2:64994296-64994376 ( 51) TTCCTCTT 1 chr1:230305609-230305689 ( 4) TCTCATTT 1 chr1:23445879-23445959 ( 53) TTTAGCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.11624 E= 6.5e-190 -1378 -1378 -1378 181 -1378 -392 -1378 179 -1378 -234 -1378 175 -431 219 -1378 -1378 153 -1378 -85 -216 -1378 183 -69 -152 -1378 -1378 -1378 181 -1378 -492 -1378 180 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 141 E= 6.5e-190 0.000000 0.000000 0.000000 1.000000 0.000000 0.014184 0.000000 0.985816 0.000000 0.042553 0.000000 0.957447 0.014184 0.985816 0.000000 0.000000 0.815603 0.000000 0.120567 0.063830 0.000000 0.765957 0.134752 0.099291 0.000000 0.000000 0.000000 1.000000 0.000000 0.007092 0.000000 0.992908 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 regular expression -------------------------------------------------------------------------------- TTTCACTT -------------------------------------------------------------------------------- Time 4.68 secs. ******************************************************************************** ******************************************************************************** MOTIF AAGTGAAA MEME-2 width = 8 sites = 126 llr = 1126 E-value = 1.3e-158 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A aa1::aaa pos.-specific C ::22:::: probability G ::7:a::: matrix T :::8:::: bits 2.2 2.0 1.8 * **** 1.6 ** **** Relative 1.3 ** **** Entropy 1.1 ******** (12.9 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAGTGAAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:32811783-32811863 32 2.42e-05 TCGGAGGAGG AAGTGAAA GCGAAAGCCA chr2:85116095-85116175 36 2.42e-05 aagctggaga aagtgaaa gcagaagtgg chr8:129389412-129389492 5 2.42e-05 gcaa aagtgaaa gtaaaacaaa chr19:47217864-47217944 11 2.42e-05 GTAGAACAGA AAGTGAAA CTGCCCCGGT chr1:230305609-230305689 51 2.42e-05 GGAGCAGTGA AAGTGAAA CTGGAAATGC chr12:10517673-10517753 30 2.42e-05 ccaaaagtga aagtgaaa gtcagctgcc chr2:233228773-233228853 32 2.42e-05 GAAGAAATGA AAGTGAAA CTGGCTGGGA chr11:122820165-12282024 23 2.42e-05 CTCAAAGAGA AAGTGAAA CTGGCCTGGA chr1:248070101-248070181 21 2.42e-05 ttgcaaatga aagtgaaa ctggtttttc chr11:20382353-20382433 50 2.42e-05 gggaaaggga aagtgaaa ggaaagaagg chr3:141405705-141405785 46 2.42e-05 atcaaacaga aagtgaaa gcttctttct chr3:88238569-88238649 30 2.42e-05 attaaagcaa aagtgaaa gtaaagcttc chr8:145060604-145060684 21 2.42e-05 AGGAAAACAA AAGTGAAA CTGAAAGACG chr1:155607345-155607425 52 2.42e-05 agtgaaagta aagtgaaa gcgaaagtaa chrX:40504126-40504206 30 2.42e-05 tcaagaatga aagtgaaa ccagtcagtt chr17:62092425-62092505 23 2.42e-05 tagaaacaga aagtgaaa cagtagttgc chr6:164817834-164817914 36 2.42e-05 tctacatcca aagtgaaa ctgaaacCAT chr1:193387727-193387807 17 2.42e-05 AAGAAAGGGA AAGTGAAA GTGCTGGAAA chr3:40242408-40242488 30 2.42e-05 gaaaaaacga aagtgaaa cccactgtta chr5:96212150-96212230 26 2.42e-05 TTAGAACAGA AAGTGAAA GCAAAAGTAA chr10:120891285-12089136 37 2.42e-05 TGCAAAGCGA AAGTGAAA GAAAACTGGC chr1:89594655-89594735 24 2.42e-05 GTGACAATGA AAGTGAAA GTAGAGCAGG chr2:64994296-64994376 10 2.42e-05 GAGTTTAGA AAGTGAAA CTGACTAGAA chr6:36354321-36354401 22 2.42e-05 CGGAAAGGAA AAGTGAAA CCAGCTCCAT chr2:159172697-159172777 33 2.42e-05 CTCAAAGAGA AAGTGAAA ATGGCAAACA chr4:37074964-37075044 16 2.42e-05 attaaagcga aagtgaaa gtaaaacaga chr6:169251982-169252062 37 2.42e-05 AAGAAAATGA AAGTGAAA GTAATCGGAG chr17:46590669-46590749 41 2.42e-05 GGAGAGGTGA AAGTGAAA GTGCAGGAGA chr5:81074984-81075064 20 2.42e-05 AATTAAAAGA AAGTGAAA CTAAAAACAA chr1:228328986-228329066 38 2.42e-05 CGGGGAAAGA AAGTGAAA ATGAAAGCGC chr22:36556818-36556898 37 2.42e-05 CCAAAAGGGA AAGTGAAA GTCACAACTT chr2:108329429-108329509 26 2.42e-05 GTGAAAGAGA AAGTGAAA GTCCTCAAAC chr1:33427989-33428069 30 2.42e-05 TATTAACTGA AAGTGAAA GTGAGCCACC chr13:28029596-28029676 51 2.42e-05 ACCAAAGTGA AAGTGAAA GCTCTTAGTT chr5:25569252-25569332 12 2.42e-05 ggcaagatta aagtgaaa gcgaaagtaa chr17:43304593-43304673 23 2.42e-05 CTCAAACTGA AAGTGAAA CCCTAGGGTG chr11:61783211-61783291 21 2.42e-05 gttaaaacga aagtgaaa ggaagtgctg chr21:44821867-44821947 45 2.42e-05 CTTAAAAAGA AAGTGAAA GTGGAGGCCG chr7:113688489-113688569 11 2.42e-05 ggtaaaaTGA AAGTGAAA GTAAAAGGAA chr10:44118960-44119040 18 2.42e-05 gagagagaga aagtgaaa gtgaaagtaa chr9:110008687-110008767 23 2.42e-05 CTGAAAGTGA AAGTGAAA GTGACTGTGT chr10:94462149-94462229 12 2.42e-05 TACAGAATGA AAGTGAAA GCCATGTGCC chr13:71865143-71865223 40 2.42e-05 agtgaaagta aagtgaaa gcgaaagtaa chr16:19106494-19106574 36 2.42e-05 agagaaagga aagtgaaa acggaagtga chr10:90844297-90844377 42 2.42e-05 ATGAAATAGA AAGTGAAA GAACTAAAGA chr11:114217463-11421754 37 2.42e-05 attaaagcga aagtgaaa gtaaagcttc chr4:6753354-6753434 28 2.42e-05 gtgaaaaaga aagtgaaa ctccccccta chr10:90734839-90734919 44 2.42e-05 ACTGAAGTGA AAGTGAAA CCAGAATGCT chr1:23445879-23445959 19 2.42e-05 acATAACTGA AAGTGAAA GCAAGTATGA chr19:18197785-18197865 18 2.42e-05 AGGCAAGTCA AAGTGAAA GAGAAACCCA chr1:212016642-212016722 10 2.42e-05 tttgattta aagtgaaa aatgcaactc chr8:29356971-29357051 49 2.42e-05 CTGAAAGGGA AAGTGAAA GCGGCAACAT chr11:63304241-63304321 25 2.42e-05 AGGAAAGTGA AAGTGAAA TTCTCTCCTT chr5:18746279-18746359 40 2.42e-05 agcaaaagta aagtgaaa gcgaaagtaa chr7:12297398-12297478 72 2.42e-05 atgtggctgg aagtgaaa g chr1:225127893-225127973 44 2.42e-05 ttaaaaggga aagtgaaa cctggcaggt chr20:5059260-5059340 22 2.42e-05 ggcagaggga aagtgaaa ctggcggtta chrX:154862266-154862346 32 2.42e-05 ccaaaagaga aagtgaaa gtgtacaagg chr2:149310691-149310771 35 2.42e-05 gatgaactga aagtgaaa gcagcctgct chr12:118498603-11849868 47 2.42e-05 CTGACAACGA AAGTGAAA CAAAGCTGGT chr4:17387207-17387287 31 2.42e-05 ccaaaaacga aagtgaaa gctaggcctc chr3:62431144-62431224 36 2.42e-05 ATGAAAATGA AAGTGAAA GTGAAGTGGG chr13:44848666-44848746 10 2.42e-05 ggaaacaga aagtgaaa gcagaggcag chr1:161014742-161014822 39 2.42e-05 AAGGAACTGA AAGTGAAA CCGTACAGAC chr5:159028418-159028498 9 2.42e-05 atggcaga aagtgaaa gtggaatggg chr19:42553350-42553430 22 2.42e-05 ctgggaatga aagtgaaa gtggttcaac chr3:182920268-182920348 35 2.42e-05 cacaaacaga aagtgaaa gctaggctag chr12:68630510-68630590 28 2.42e-05 ACCAAAGAGA AAGTGAAA GTACACAGCG chr8:129394299-129394379 15 2.42e-05 attaaagtga aagtgaaa gtaaaacaaa chr18:65085532-65085612 27 2.42e-05 CAACAAACGA AAGTGAAA GCAACTGAGC chr6:68071371-68071451 47 2.42e-05 tctaaaatga aagtgaaa gtaaaaaTCA chr8:71126848-71126928 22 4.24e-05 CTAGAAACAA AAGCGAAA CTGACCCAGG chr15:51199237-51199317 17 4.24e-05 gtttattgca aagcgaaa gtacaccctc chr17:75606383-75606463 49 4.24e-05 cgactacaga aagcgaaa gtgaggtaca chr3:122399619-122399699 40 4.24e-05 CAGGAAACGA AAGCGAAA GAGTCAAAGT chr3:45185940-45186020 3 4.24e-05 GA AAGCGAAA GGGAAAGTTC chr8:18613392-18613472 27 4.24e-05 ACGTGATCGA AAGCGAAA GCAGGCTGCC chr8:117396766-117396846 30 4.24e-05 CTCTGCGCCA AAGCGAAA CTGAAACTCT chr1:105249404-105249484 26 4.24e-05 agcaaaagta aagcgaaa gcgaaagtaa chr5:5025939-5026019 47 4.24e-05 agtaaagcaa aagcgaaa gtaaagcttc chr2:168401434-168401514 19 4.24e-05 agatttataa aagcgaaa gtaaaatgaa chr5:114404368-114404448 24 4.24e-05 attaaagaga aagcgaaa gtaaagctca chr4:133045183-133045263 22 4.24e-05 gggaaagcga aagcgaaa gtaaagcttc chr19:12425536-12425616 30 4.24e-05 ttgaaaacaa aagcgaaa cttgcctgcc chr2:4720683-4720763 15 4.24e-05 agatttatta aagcgaaa gccaaagtaa chr2:109591219-109591299 12 6.62e-05 aagaaactga aactgaaa ctgagagggt chr6:2369949-2370029 6 6.62e-05 gagac aactgaaa ccgaaagtgg chr8:81344846-81344926 27 6.62e-05 gacgaaggga aactgaaa atgaaagtac chr17:77707017-77707097 32 6.62e-05 ctgtgggaca aactgaaa gtggaagtgc chr11:46237662-46237742 46 6.62e-05 cagatagaga aactgaaa cccagactgc chr6:28108096-28108176 10 6.62e-05 GAAAAAAGA AACTGAAA GTAGAGTTCT chr8:124049927-124050007 46 6.62e-05 ACGAAATAGA AACTGAAA CTGAAGCTGT chr11:46582395-46582475 27 6.62e-05 CAGAAACGGA AACTGAAA CCAGCTGCCT chr22:36044378-36044458 29 6.62e-05 GCAAAAAGGA AACTGAAA GTGACAGCTG chr8:117484981-117485061 25 6.62e-05 CTAAGACAGA AACTGAAA CTAAAacccg chr17:80377517-80377597 34 6.62e-05 TCAGAACTGA AACTGAAA GTATAAGGAG chr2:176432576-176432656 24 6.62e-05 TATAAAGAGA AACTGAAA GTAGGGACAT chr22:30443455-30443535 1 6.62e-05 . aactgaaa ctgaaactat chr17:1992936-1993016 42 6.62e-05 CAGAAAGGAA AACTGAAA GTGAGATGTG chr9:114857339-114857419 25 9.74e-05 CTCCTAGTGA AAATGAAA GTGGGAAGAA chr3:138500132-138500212 29 9.74e-05 caaaaaacga aaaTGAAA CTTCTggcta chr17:77826756-77826836 58 9.74e-05 tggttaactt aaatgaaa atacccacag chr2:166759591-166759671 3 9.74e-05 GA AAATGAAA GAGAAAGTGG chr11:10324487-10324567 6 9.74e-05 GGGAG AAATGAAA GTAAAACCTG chr14:64733118-64733198 9 9.74e-05 tgaaacga aaatgaaa catagactct chr1:67399928-67400008 31 9.74e-05 atcatagaga aaatgaaa gtgagcagag chr13:28278949-28279029 10 1.15e-04 caaaacaga aaccgaaa gtagaagaaa chr4:185189236-185189316 23 1.15e-04 gccatagcga aaccgaaa cctcattaca chr10:28467417-28467497 25 1.15e-04 TTGAAAATGA AACCGAAA CCATTCTACT chr7:36352304-36352384 13 1.15e-04 cagaaaagaa aaccgaaa ctcagaagat chr9:14992173-14992253 45 1.15e-04 gacaaaacaa aaccgaaa ccaaagcggg chr2:157520438-157520518 38 1.39e-04 GGGGTGGGTA AAGAGAAA CAAAGCTTTC chr1:153861118-153861198 16 1.39e-04 CCACAGACGA AAGAGAAA GTAGTTTTAG chr2:108888489-108888569 7 1.63e-04 gaaacg aaacgaaa cagaaacaaa chr19:44599473-44599553 24 1.63e-04 tctattttaa aaacgaaa gtgagacaca chr1:179098955-179099035 1 1.94e-04 . AAGTAAAA CTGACACTAG chr12:14369456-14369536 6 2.26e-04 TAATT AAGTTAAA GAATCCTGgg chr7:21392620-21392700 29 2.81e-04 CAGATCAGTC CAGTGAAA TCGAAACTGG chr3:88081074-88081154 48 2.81e-04 CAGTTTCTCA GAGTGAAA GGGTCTAGTT chr14:63920465-63920545 69 3.29e-04 CGTGTCCATG AAGTCAAA AATG chr18:53144914-53144994 68 3.29e-04 ACTACTGAAG TAGTGAAA ATACA chrX:146957501-146957581 14 3.53e-04 ACAAAAACAA AACAGAAA CTTGCCTTGA chr6:25139121-25139201 23 5.04e-04 TTTGCATGTT AACTTAAA ACTGATTTGG chr2:9971068-9971148 29 6.26e-04 GGGCTATGCA AACTGCAA GTGGTTTCAG chr6:143140899-143140979 33 7.14e-04 TCAGCTTGAA AAATAAAA TTAGATAGGT chr12:68856769-68856849 2 7.38e-04 c aaccaaaa tctgagccta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:32811783-32811863 2.4e-05 31_[+2]_41 chr2:85116095-85116175 2.4e-05 35_[+2]_37 chr8:129389412-129389492 2.4e-05 4_[+2]_68 chr19:47217864-47217944 2.4e-05 10_[+2]_62 chr1:230305609-230305689 2.4e-05 50_[+2]_22 chr12:10517673-10517753 2.4e-05 29_[+2]_43 chr2:233228773-233228853 2.4e-05 31_[+2]_41 chr11:122820165-12282024 2.4e-05 22_[+2]_50 chr1:248070101-248070181 2.4e-05 20_[+2]_52 chr11:20382353-20382433 2.4e-05 49_[+2]_23 chr3:141405705-141405785 2.4e-05 45_[+2]_27 chr3:88238569-88238649 2.4e-05 29_[+2]_43 chr8:145060604-145060684 2.4e-05 20_[+2]_52 chr1:155607345-155607425 2.4e-05 51_[+2]_21 chrX:40504126-40504206 2.4e-05 29_[+2]_43 chr17:62092425-62092505 2.4e-05 22_[+2]_50 chr6:164817834-164817914 2.4e-05 35_[+2]_37 chr1:193387727-193387807 2.4e-05 16_[+2]_56 chr3:40242408-40242488 2.4e-05 29_[+2]_43 chr5:96212150-96212230 2.4e-05 25_[+2]_47 chr10:120891285-12089136 2.4e-05 36_[+2]_36 chr1:89594655-89594735 2.4e-05 23_[+2]_49 chr2:64994296-64994376 2.4e-05 9_[+2]_63 chr6:36354321-36354401 2.4e-05 21_[+2]_51 chr2:159172697-159172777 2.4e-05 32_[+2]_40 chr4:37074964-37075044 2.4e-05 15_[+2]_57 chr6:169251982-169252062 2.4e-05 36_[+2]_36 chr17:46590669-46590749 2.4e-05 40_[+2]_32 chr5:81074984-81075064 2.4e-05 19_[+2]_53 chr1:228328986-228329066 2.4e-05 37_[+2]_35 chr22:36556818-36556898 2.4e-05 36_[+2]_36 chr2:108329429-108329509 2.4e-05 25_[+2]_47 chr1:33427989-33428069 2.4e-05 29_[+2]_43 chr13:28029596-28029676 2.4e-05 50_[+2]_22 chr5:25569252-25569332 2.4e-05 11_[+2]_61 chr17:43304593-43304673 2.4e-05 22_[+2]_50 chr11:61783211-61783291 2.4e-05 20_[+2]_52 chr21:44821867-44821947 2.4e-05 44_[+2]_28 chr7:113688489-113688569 2.4e-05 10_[+2]_62 chr10:44118960-44119040 2.4e-05 17_[+2]_55 chr9:110008687-110008767 2.4e-05 22_[+2]_50 chr10:94462149-94462229 2.4e-05 11_[+2]_61 chr13:71865143-71865223 2.4e-05 39_[+2]_33 chr16:19106494-19106574 2.4e-05 35_[+2]_37 chr10:90844297-90844377 2.4e-05 41_[+2]_31 chr11:114217463-11421754 2.4e-05 36_[+2]_36 chr4:6753354-6753434 2.4e-05 27_[+2]_45 chr10:90734839-90734919 2.4e-05 43_[+2]_29 chr1:23445879-23445959 2.4e-05 18_[+2]_54 chr19:18197785-18197865 2.4e-05 17_[+2]_55 chr1:212016642-212016722 2.4e-05 9_[+2]_63 chr8:29356971-29357051 2.4e-05 48_[+2]_24 chr11:63304241-63304321 2.4e-05 24_[+2]_48 chr5:18746279-18746359 2.4e-05 39_[+2]_33 chr7:12297398-12297478 2.4e-05 71_[+2]_1 chr1:225127893-225127973 2.4e-05 43_[+2]_29 chr20:5059260-5059340 2.4e-05 21_[+2]_51 chrX:154862266-154862346 2.4e-05 31_[+2]_41 chr2:149310691-149310771 2.4e-05 34_[+2]_38 chr12:118498603-11849868 2.4e-05 46_[+2]_26 chr4:17387207-17387287 2.4e-05 30_[+2]_42 chr3:62431144-62431224 2.4e-05 35_[+2]_37 chr13:44848666-44848746 2.4e-05 9_[+2]_63 chr1:161014742-161014822 2.4e-05 38_[+2]_34 chr5:159028418-159028498 2.4e-05 8_[+2]_64 chr19:42553350-42553430 2.4e-05 21_[+2]_51 chr3:182920268-182920348 2.4e-05 34_[+2]_38 chr12:68630510-68630590 2.4e-05 27_[+2]_45 chr8:129394299-129394379 2.4e-05 14_[+2]_58 chr18:65085532-65085612 2.4e-05 26_[+2]_46 chr6:68071371-68071451 2.4e-05 46_[+2]_26 chr8:71126848-71126928 4.2e-05 21_[+2]_51 chr15:51199237-51199317 4.2e-05 16_[+2]_56 chr17:75606383-75606463 4.2e-05 48_[+2]_24 chr3:122399619-122399699 4.2e-05 39_[+2]_33 chr3:45185940-45186020 4.2e-05 2_[+2]_70 chr8:18613392-18613472 4.2e-05 26_[+2]_46 chr8:117396766-117396846 4.2e-05 29_[+2]_43 chr1:105249404-105249484 4.2e-05 25_[+2]_47 chr5:5025939-5026019 4.2e-05 46_[+2]_26 chr2:168401434-168401514 4.2e-05 18_[+2]_54 chr5:114404368-114404448 4.2e-05 23_[+2]_49 chr4:133045183-133045263 4.2e-05 21_[+2]_51 chr19:12425536-12425616 4.2e-05 29_[+2]_43 chr2:4720683-4720763 4.2e-05 14_[+2]_58 chr2:109591219-109591299 6.6e-05 11_[+2]_61 chr6:2369949-2370029 6.6e-05 5_[+2]_67 chr8:81344846-81344926 6.6e-05 26_[+2]_46 chr17:77707017-77707097 6.6e-05 31_[+2]_41 chr11:46237662-46237742 6.6e-05 45_[+2]_27 chr6:28108096-28108176 6.6e-05 9_[+2]_63 chr8:124049927-124050007 6.6e-05 45_[+2]_27 chr11:46582395-46582475 6.6e-05 26_[+2]_46 chr22:36044378-36044458 6.6e-05 28_[+2]_44 chr8:117484981-117485061 6.6e-05 24_[+2]_48 chr17:80377517-80377597 6.6e-05 33_[+2]_39 chr2:176432576-176432656 6.6e-05 23_[+2]_49 chr22:30443455-30443535 6.6e-05 [+2]_72 chr17:1992936-1993016 6.6e-05 41_[+2]_31 chr9:114857339-114857419 9.7e-05 24_[+2]_48 chr3:138500132-138500212 9.7e-05 28_[+2]_44 chr17:77826756-77826836 9.7e-05 57_[+2]_15 chr2:166759591-166759671 9.7e-05 2_[+2]_70 chr11:10324487-10324567 9.7e-05 5_[+2]_67 chr14:64733118-64733198 9.7e-05 8_[+2]_64 chr1:67399928-67400008 9.7e-05 30_[+2]_42 chr13:28278949-28279029 0.00012 9_[+2]_63 chr4:185189236-185189316 0.00012 22_[+2]_50 chr10:28467417-28467497 0.00012 24_[+2]_48 chr7:36352304-36352384 0.00012 12_[+2]_60 chr9:14992173-14992253 0.00012 44_[+2]_28 chr2:157520438-157520518 0.00014 37_[+2]_35 chr1:153861118-153861198 0.00014 15_[+2]_57 chr2:108888489-108888569 0.00016 6_[+2]_66 chr19:44599473-44599553 0.00016 23_[+2]_49 chr1:179098955-179099035 0.00019 [+2]_72 chr12:14369456-14369536 0.00023 5_[+2]_67 chr7:21392620-21392700 0.00028 28_[+2]_44 chr3:88081074-88081154 0.00028 47_[+2]_25 chr14:63920465-63920545 0.00033 68_[+2]_4 chr18:53144914-53144994 0.00033 67_[+2]_5 chrX:146957501-146957581 0.00035 13_[+2]_59 chr6:25139121-25139201 0.0005 22_[+2]_50 chr2:9971068-9971148 0.00063 28_[+2]_44 chr6:143140899-143140979 0.00071 32_[+2]_40 chr12:68856769-68856849 0.00074 1_[+2]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAGTGAAA width=8 seqs=126 chr6:32811783-32811863 ( 32) AAGTGAAA 1 chr2:85116095-85116175 ( 36) AAGTGAAA 1 chr8:129389412-129389492 ( 5) AAGTGAAA 1 chr19:47217864-47217944 ( 11) AAGTGAAA 1 chr1:230305609-230305689 ( 51) AAGTGAAA 1 chr12:10517673-10517753 ( 30) AAGTGAAA 1 chr2:233228773-233228853 ( 32) AAGTGAAA 1 chr11:122820165-12282024 ( 23) AAGTGAAA 1 chr1:248070101-248070181 ( 21) AAGTGAAA 1 chr11:20382353-20382433 ( 50) AAGTGAAA 1 chr3:141405705-141405785 ( 46) AAGTGAAA 1 chr3:88238569-88238649 ( 30) AAGTGAAA 1 chr8:145060604-145060684 ( 21) AAGTGAAA 1 chr1:155607345-155607425 ( 52) AAGTGAAA 1 chrX:40504126-40504206 ( 30) AAGTGAAA 1 chr17:62092425-62092505 ( 23) AAGTGAAA 1 chr6:164817834-164817914 ( 36) AAGTGAAA 1 chr1:193387727-193387807 ( 17) AAGTGAAA 1 chr3:40242408-40242488 ( 30) AAGTGAAA 1 chr5:96212150-96212230 ( 26) AAGTGAAA 1 chr10:120891285-12089136 ( 37) AAGTGAAA 1 chr1:89594655-89594735 ( 24) AAGTGAAA 1 chr2:64994296-64994376 ( 10) AAGTGAAA 1 chr6:36354321-36354401 ( 22) AAGTGAAA 1 chr2:159172697-159172777 ( 33) AAGTGAAA 1 chr4:37074964-37075044 ( 16) AAGTGAAA 1 chr6:169251982-169252062 ( 37) AAGTGAAA 1 chr17:46590669-46590749 ( 41) AAGTGAAA 1 chr5:81074984-81075064 ( 20) AAGTGAAA 1 chr1:228328986-228329066 ( 38) AAGTGAAA 1 chr22:36556818-36556898 ( 37) AAGTGAAA 1 chr2:108329429-108329509 ( 26) AAGTGAAA 1 chr1:33427989-33428069 ( 30) AAGTGAAA 1 chr13:28029596-28029676 ( 51) AAGTGAAA 1 chr5:25569252-25569332 ( 12) AAGTGAAA 1 chr17:43304593-43304673 ( 23) AAGTGAAA 1 chr11:61783211-61783291 ( 21) AAGTGAAA 1 chr21:44821867-44821947 ( 45) AAGTGAAA 1 chr7:113688489-113688569 ( 11) AAGTGAAA 1 chr10:44118960-44119040 ( 18) AAGTGAAA 1 chr9:110008687-110008767 ( 23) AAGTGAAA 1 chr10:94462149-94462229 ( 12) AAGTGAAA 1 chr13:71865143-71865223 ( 40) AAGTGAAA 1 chr16:19106494-19106574 ( 36) AAGTGAAA 1 chr10:90844297-90844377 ( 42) AAGTGAAA 1 chr11:114217463-11421754 ( 37) AAGTGAAA 1 chr4:6753354-6753434 ( 28) AAGTGAAA 1 chr10:90734839-90734919 ( 44) AAGTGAAA 1 chr1:23445879-23445959 ( 19) AAGTGAAA 1 chr19:18197785-18197865 ( 18) AAGTGAAA 1 chr1:212016642-212016722 ( 10) AAGTGAAA 1 chr8:29356971-29357051 ( 49) AAGTGAAA 1 chr11:63304241-63304321 ( 25) AAGTGAAA 1 chr5:18746279-18746359 ( 40) AAGTGAAA 1 chr7:12297398-12297478 ( 72) AAGTGAAA 1 chr1:225127893-225127973 ( 44) AAGTGAAA 1 chr20:5059260-5059340 ( 22) AAGTGAAA 1 chrX:154862266-154862346 ( 32) AAGTGAAA 1 chr2:149310691-149310771 ( 35) AAGTGAAA 1 chr12:118498603-11849868 ( 47) AAGTGAAA 1 chr4:17387207-17387287 ( 31) AAGTGAAA 1 chr3:62431144-62431224 ( 36) AAGTGAAA 1 chr13:44848666-44848746 ( 10) AAGTGAAA 1 chr1:161014742-161014822 ( 39) AAGTGAAA 1 chr5:159028418-159028498 ( 9) AAGTGAAA 1 chr19:42553350-42553430 ( 22) AAGTGAAA 1 chr3:182920268-182920348 ( 35) AAGTGAAA 1 chr12:68630510-68630590 ( 28) AAGTGAAA 1 chr8:129394299-129394379 ( 15) AAGTGAAA 1 chr18:65085532-65085612 ( 27) AAGTGAAA 1 chr6:68071371-68071451 ( 47) AAGTGAAA 1 chr8:71126848-71126928 ( 22) AAGCGAAA 1 chr15:51199237-51199317 ( 17) AAGCGAAA 1 chr17:75606383-75606463 ( 49) AAGCGAAA 1 chr3:122399619-122399699 ( 40) AAGCGAAA 1 chr3:45185940-45186020 ( 3) AAGCGAAA 1 chr8:18613392-18613472 ( 27) AAGCGAAA 1 chr8:117396766-117396846 ( 30) AAGCGAAA 1 chr1:105249404-105249484 ( 26) AAGCGAAA 1 chr5:5025939-5026019 ( 47) AAGCGAAA 1 chr2:168401434-168401514 ( 19) AAGCGAAA 1 chr5:114404368-114404448 ( 24) AAGCGAAA 1 chr4:133045183-133045263 ( 22) AAGCGAAA 1 chr19:12425536-12425616 ( 30) AAGCGAAA 1 chr2:4720683-4720763 ( 15) AAGCGAAA 1 chr2:109591219-109591299 ( 12) AACTGAAA 1 chr6:2369949-2370029 ( 6) AACTGAAA 1 chr8:81344846-81344926 ( 27) AACTGAAA 1 chr17:77707017-77707097 ( 32) AACTGAAA 1 chr11:46237662-46237742 ( 46) AACTGAAA 1 chr6:28108096-28108176 ( 10) AACTGAAA 1 chr8:124049927-124050007 ( 46) AACTGAAA 1 chr11:46582395-46582475 ( 27) AACTGAAA 1 chr22:36044378-36044458 ( 29) AACTGAAA 1 chr8:117484981-117485061 ( 25) AACTGAAA 1 chr17:80377517-80377597 ( 34) AACTGAAA 1 chr2:176432576-176432656 ( 24) AACTGAAA 1 chr22:30443455-30443535 ( 1) AACTGAAA 1 chr17:1992936-1993016 ( 42) AACTGAAA 1 chr9:114857339-114857419 ( 25) AAATGAAA 1 chr3:138500132-138500212 ( 29) AAATGAAA 1 chr17:77826756-77826836 ( 58) AAATGAAA 1 chr2:166759591-166759671 ( 3) AAATGAAA 1 chr11:10324487-10324567 ( 6) AAATGAAA 1 chr14:64733118-64733198 ( 9) AAATGAAA 1 chr1:67399928-67400008 ( 31) AAATGAAA 1 chr13:28278949-28279029 ( 10) AACCGAAA 1 chr4:185189236-185189316 ( 23) AACCGAAA 1 chr10:28467417-28467497 ( 25) AACCGAAA 1 chr7:36352304-36352384 ( 13) AACCGAAA 1 chr9:14992173-14992253 ( 45) AACCGAAA 1 chr2:157520438-157520518 ( 38) AAGAGAAA 1 chr1:153861118-153861198 ( 16) AAGAGAAA 1 chr2:108888489-108888569 ( 7) AAACGAAA 1 chr19:44599473-44599553 ( 24) AAACGAAA 1 chr1:179098955-179099035 ( 1) AAGTAAAA 1 chr12:14369456-14369536 ( 6) AAGTTAAA 1 chr7:21392620-21392700 ( 29) CAGTGAAA 1 chr3:88081074-88081154 ( 48) GAGTGAAA 1 chr14:63920465-63920545 ( 69) AAGTCAAA 1 chr18:53144914-53144994 ( 68) TAGTGAAA 1 chrX:146957501-146957581 ( 14) AACAGAAA 1 chr6:25139121-25139201 ( 23) AACTTAAA 1 chr2:9971068-9971148 ( 29) AACTGCAA 1 chr6:143140899-143140979 ( 33) AAATAAAA 1 chr12:68856769-68856849 ( 2) AACCAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.15 E= 1.3e-158 179 -476 -478 -516 183 -1362 -1362 -1362 -183 -24 176 -1362 -356 -30 -1362 149 -356 -476 213 -417 182 -476 -1362 -1362 183 -1362 -1362 -1362 183 -1362 -1362 -1362 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 126 E= 1.3e-158 0.976190 0.007937 0.007937 0.007937 1.000000 0.000000 0.000000 0.000000 0.079365 0.182540 0.738095 0.000000 0.023810 0.174603 0.000000 0.801587 0.023810 0.007937 0.952381 0.015873 0.992063 0.007937 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAGTGAAA MEME-2 regular expression -------------------------------------------------------------------------------- AAGTGAAA -------------------------------------------------------------------------------- Time 8.03 secs. ******************************************************************************** ******************************************************************************** MOTIF ACTTTCAC MEME-3 width = 8 sites = 54 llr = 415 E-value = 4.4e-006 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 6:::::7: pos.-specific C 18::29:a probability G 21:::::: matrix T 11aa813: bits 2.2 * 2.0 * 1.8 ** * * 1.6 ** * * Relative 1.3 *** * * Entropy 1.1 ***** * (11.1 bits) 0.9 ***** * 0.7 ******* 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ACTTTCAC consensus G C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:103452549-103452629 49 1.83e-05 CTTACAGGTG ACTTTCAC TAACCTGCTA chr1:83530435-83530515 39 1.83e-05 AAAAAATGTT ACTTTCAC TTTCACTTTC chr12:43089615-43089695 37 1.83e-05 ctgctcccac actttcac tttctatttc chr2:156403858-156403938 42 1.83e-05 GATCATTAAC ACTTTCAC TTTCACTTTC chr8:103299683-103299763 51 1.83e-05 TGCTGTGGTT ACTTTCAC TATCACTTTC chr12:14369456-14369536 62 1.83e-05 tggaagcctt actttcac tttcacttta chr11:39392896-39392976 43 1.83e-05 tggaagcttt actttcac tttcgtttta chr2:102872852-102872932 34 1.83e-05 AACTTTGTTT ACTTTCAC TTTCACTTCT chr12:58359803-58359883 54 1.83e-05 cttttgcttt actttcac tttcacttta chr8:67447420-67447500 48 1.83e-05 acttcctttc actttcac ttcatttcac chr8:119933319-119933399 45 1.83e-05 GAGCCTCTTC ACTTTCAC TTTCACTTTT chr14:86400965-86401045 34 3.24e-05 ctttactttc gctttcac tttacttttg chr11:796324-796404 3 6.47e-05 GC ACTTTCTC TTTCACTTTG chr18:36521324-36521404 27 6.47e-05 tggaagcttt actttctc ttttgcttta chr16:86020820-86020900 52 6.47e-05 TATCTGTTCT ACTTTCTC TTTCACTTTC chr11:38637819-38637899 44 6.47e-05 gatcttcaag actttctc catatcagca chr3:88238569-88238649 43 7.54e-05 tgaaagtaaa gcttccac gcggtggaag chr10:17549236-17549316 56 7.54e-05 agaacttgta gcttccac tttcgctttc chr13:71865143-71865223 59 7.54e-05 cgaaagtaaa gcttccac gaggtggaag chr11:114217463-11421754 50 7.54e-05 tgaaagtaaa gcttccac gcggtggaag chr5:18746279-18746359 59 7.54e-05 cgaaagtaaa gcttccac gcagtggaag chr2:4720683-4720763 51 7.54e-05 cgaaagtaaa gcttccac gtagtggaag chr4:159870414-159870494 28 8.97e-05 tcattgatta gctttctc tttcactttc chr13:33105047-33105127 28 8.97e-05 gagcttgcat gctttctc tttcactttg chr19:52333602-52333682 57 1.04e-04 ttctttctct acttcctc atttcacatt chr4:89300512-89300592 13 1.04e-04 CCGAAGAGCA ACTTCCTC AGTTTCGTTT chr6:33281797-33281877 61 1.36e-04 TCCTCTTCCT CCTTTCAC TTTCACTTTC chr15:51649325-51649405 62 1.36e-04 ctttcgcttt cctttcac tttcacttta chr21:36901616-36901696 29 1.36e-04 CTGCCTCTCT CCTTTCAC TTTCACTTCG chr3:169995772-169995852 54 1.36e-04 aaaatgtttt tctttcac tttcactttg chr2:113525747-113525827 43 1.55e-04 ctattggtta agtttcac tttcacttag chr12:24948804-24948884 33 1.55e-04 agatttttct agtttcac tttcacttgt chr20:61436144-61436224 10 1.90e-04 gccccccgc gcttcctc tgctttcggt chr1:179098955-179099035 29 1.90e-04 GAGATGATGC ACTTTTAC TTTCACTTTT chr12:68856769-68856849 51 1.90e-04 cagcactcac acttttac tttcgtttta chr12:34279242-34279322 67 1.90e-04 tttcactttt acttttac tctcag chr19:42553350-42553430 53 1.90e-04 tttggaagac acttttac aatacgtgat chr16:56643605-56643685 67 1.90e-04 TCCATTCCTC ACTTTTAC TTTCAA chr5:115617121-115617201 44 2.14e-04 TTGCACTTTC ATTTTCAC TTTCGTTTCA chr5:130172455-130172535 41 2.14e-04 AAGAAGAGGC ATTTTCAC TTTCACTTTT chr3:121151152-121151232 39 2.14e-04 GCTGGCGCCT ATTTTCAC TTTCACTTTC chr9:96263707-96263787 32 2.14e-04 TTTCACTTTC ATTTTCAC TACTCGGTGG chr14:77420100-77420180 36 2.38e-04 AAGGGGAGCC TCTTCCAC CGGGCCACTT chr5:176727410-176727490 18 2.85e-04 TGCCCAAGCC TCTTTCTC CCTCTGTTGG chr15:97433361-97433441 42 2.85e-04 tttcactttc tctttctc tttTAAGGTA chr3:118561299-118561379 21 2.85e-04 gtggaagttt tctttctc tttcgcttta chr8:10488028-10488108 25 2.99e-04 CAGAGTGGAG GGTTTCAC TTTCACTTTC chr7:17182242-17182322 44 3.51e-04 AAAGAAGTGT GTTTTCAC TTTCACTTTC chr12:108496288-10849636 51 3.88e-04 ggactagaac acttctac tttctctttt chr3:88081074-88081154 39 3.88e-04 TTTCACTTTC AGTTTCTC AGAGTGAAAG chr18:65085532-65085612 3 3.88e-04 TG AGTTTCTC CTTCAGCAAC chr9:33025766-33025846 71 4.66e-04 TGAGGGCTGG GCTTTCCC CA chr15:50540113-50540193 8 5.01e-04 CACACAC ACTTCCCC TTGATTTACT chr16:67970735-67970815 48 5.01e-04 TCGCCTTTAC CCTTCCTC AAAGGCCCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:103452549-103452629 1.8e-05 48_[+3]_24 chr1:83530435-83530515 1.8e-05 38_[+3]_34 chr12:43089615-43089695 1.8e-05 36_[+3]_36 chr2:156403858-156403938 1.8e-05 41_[+3]_31 chr8:103299683-103299763 1.8e-05 50_[+3]_22 chr12:14369456-14369536 1.8e-05 61_[+3]_11 chr11:39392896-39392976 1.8e-05 42_[+3]_30 chr2:102872852-102872932 1.8e-05 33_[+3]_39 chr12:58359803-58359883 1.8e-05 53_[+3]_19 chr8:67447420-67447500 1.8e-05 47_[+3]_25 chr8:119933319-119933399 1.8e-05 44_[+3]_28 chr14:86400965-86401045 3.2e-05 33_[+3]_39 chr11:796324-796404 6.5e-05 2_[+3]_70 chr18:36521324-36521404 6.5e-05 26_[+3]_46 chr16:86020820-86020900 6.5e-05 51_[+3]_21 chr11:38637819-38637899 6.5e-05 43_[+3]_29 chr3:88238569-88238649 7.5e-05 42_[+3]_30 chr10:17549236-17549316 7.5e-05 55_[+3]_17 chr13:71865143-71865223 7.5e-05 58_[+3]_14 chr11:114217463-11421754 7.5e-05 49_[+3]_23 chr5:18746279-18746359 7.5e-05 58_[+3]_14 chr2:4720683-4720763 7.5e-05 50_[+3]_22 chr4:159870414-159870494 9e-05 27_[+3]_45 chr13:33105047-33105127 9e-05 27_[+3]_45 chr19:52333602-52333682 0.0001 56_[+3]_16 chr4:89300512-89300592 0.0001 12_[+3]_60 chr6:33281797-33281877 0.00014 60_[+3]_12 chr15:51649325-51649405 0.00014 61_[+3]_11 chr21:36901616-36901696 0.00014 28_[+3]_44 chr3:169995772-169995852 0.00014 53_[+3]_19 chr2:113525747-113525827 0.00015 42_[+3]_30 chr12:24948804-24948884 0.00015 32_[+3]_40 chr20:61436144-61436224 0.00019 9_[+3]_63 chr1:179098955-179099035 0.00019 28_[+3]_44 chr12:68856769-68856849 0.00019 50_[+3]_22 chr12:34279242-34279322 0.00019 66_[+3]_6 chr19:42553350-42553430 0.00019 52_[+3]_20 chr16:56643605-56643685 0.00019 66_[+3]_6 chr5:115617121-115617201 0.00021 43_[+3]_29 chr5:130172455-130172535 0.00021 40_[+3]_32 chr3:121151152-121151232 0.00021 38_[+3]_34 chr9:96263707-96263787 0.00021 31_[+3]_41 chr14:77420100-77420180 0.00024 35_[+3]_37 chr5:176727410-176727490 0.00029 17_[+3]_55 chr15:97433361-97433441 0.00029 41_[+3]_31 chr3:118561299-118561379 0.00029 20_[+3]_52 chr8:10488028-10488108 0.0003 24_[+3]_48 chr7:17182242-17182322 0.00035 43_[+3]_29 chr12:108496288-10849636 0.00039 50_[+3]_22 chr3:88081074-88081154 0.00039 38_[+3]_34 chr18:65085532-65085612 0.00039 2_[+3]_70 chr9:33025766-33025846 0.00047 70_[+3]_2 chr15:50540113-50540193 0.0005 7_[+3]_65 chr16:67970735-67970815 0.0005 47_[+3]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTTTCAC width=8 seqs=54 chr7:103452549-103452629 ( 49) ACTTTCAC 1 chr1:83530435-83530515 ( 39) ACTTTCAC 1 chr12:43089615-43089695 ( 37) ACTTTCAC 1 chr2:156403858-156403938 ( 42) ACTTTCAC 1 chr8:103299683-103299763 ( 51) ACTTTCAC 1 chr12:14369456-14369536 ( 62) ACTTTCAC 1 chr11:39392896-39392976 ( 43) ACTTTCAC 1 chr2:102872852-102872932 ( 34) ACTTTCAC 1 chr12:58359803-58359883 ( 54) ACTTTCAC 1 chr8:67447420-67447500 ( 48) ACTTTCAC 1 chr8:119933319-119933399 ( 45) ACTTTCAC 1 chr14:86400965-86401045 ( 34) GCTTTCAC 1 chr11:796324-796404 ( 3) ACTTTCTC 1 chr18:36521324-36521404 ( 27) ACTTTCTC 1 chr16:86020820-86020900 ( 52) ACTTTCTC 1 chr11:38637819-38637899 ( 44) ACTTTCTC 1 chr3:88238569-88238649 ( 43) GCTTCCAC 1 chr10:17549236-17549316 ( 56) GCTTCCAC 1 chr13:71865143-71865223 ( 59) GCTTCCAC 1 chr11:114217463-11421754 ( 50) GCTTCCAC 1 chr5:18746279-18746359 ( 59) GCTTCCAC 1 chr2:4720683-4720763 ( 51) GCTTCCAC 1 chr4:159870414-159870494 ( 28) GCTTTCTC 1 chr13:33105047-33105127 ( 28) GCTTTCTC 1 chr19:52333602-52333682 ( 57) ACTTCCTC 1 chr4:89300512-89300592 ( 13) ACTTCCTC 1 chr6:33281797-33281877 ( 61) CCTTTCAC 1 chr15:51649325-51649405 ( 62) CCTTTCAC 1 chr21:36901616-36901696 ( 29) CCTTTCAC 1 chr3:169995772-169995852 ( 54) TCTTTCAC 1 chr2:113525747-113525827 ( 43) AGTTTCAC 1 chr12:24948804-24948884 ( 33) AGTTTCAC 1 chr20:61436144-61436224 ( 10) GCTTCCTC 1 chr1:179098955-179099035 ( 29) ACTTTTAC 1 chr12:68856769-68856849 ( 51) ACTTTTAC 1 chr12:34279242-34279322 ( 67) ACTTTTAC 1 chr19:42553350-42553430 ( 53) ACTTTTAC 1 chr16:56643605-56643685 ( 67) ACTTTTAC 1 chr5:115617121-115617201 ( 44) ATTTTCAC 1 chr5:130172455-130172535 ( 41) ATTTTCAC 1 chr3:121151152-121151232 ( 39) ATTTTCAC 1 chr9:96263707-96263787 ( 32) ATTTTCAC 1 chr14:77420100-77420180 ( 36) TCTTCCAC 1 chr5:176727410-176727490 ( 18) TCTTTCTC 1 chr15:97433361-97433441 ( 42) TCTTTCTC 1 chr3:118561299-118561379 ( 21) TCTTTCTC 1 chr8:10488028-10488108 ( 25) GGTTTCAC 1 chr7:17182242-17182322 ( 44) GTTTTCAC 1 chr12:108496288-10849636 ( 51) ACTTCTAC 1 chr3:88081074-88081154 ( 39) AGTTTCTC 1 chr18:65085532-65085612 ( 3) AGTTTCTC 1 chr9:33025766-33025846 ( 71) GCTTTCCC 1 chr15:50540113-50540193 ( 8) ACTTCCCC 1 chr16:67970735-67970815 ( 48) CCTTCCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.96686 E= 4.4e-006 107 -154 14 -162 -1240 192 -123 -162 -1240 -1240 -1240 181 -1240 -1240 -1240 181 -1240 16 -1240 141 -1240 205 -1240 -136 128 -254 -1240 -4 -1240 222 -1240 -1240 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 4.4e-006 0.592593 0.074074 0.240741 0.092593 0.000000 0.814815 0.092593 0.092593 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.240741 0.000000 0.759259 0.000000 0.888889 0.000000 0.111111 0.685185 0.037037 0.000000 0.277778 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTTCAC MEME-3 regular expression -------------------------------------------------------------------------------- [AG]CTT[TC]C[AT]C -------------------------------------------------------------------------------- Time 11.26 secs. ******************************************************************************** ******************************************************************************** MOTIF GAAAGRGA MEME-4 width = 8 sites = 56 llr = 417 E-value = 1.1e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1a97:419 pos.-specific C 2:::1::: probability G 7:139691 matrix T :::::1:: bits 2.2 2.0 1.8 * 1.6 * * * Relative 1.3 ** * ** Entropy 1.1 ***** ** (10.7 bits) 0.9 ***** ** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GAAAGGGA consensus C G A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:20382353-20382433 25 1.43e-05 agcaaagggg gaaaggga aagtgaaggg chr1:193387727-193387807 9 1.43e-05 AACTGAAA GAAAGGGA AAGTGAAAGT chr8:29356971-29357051 41 1.43e-05 TGCTTTAGCT GAAAGGGA AAGTGAAAGC chr6:32811783-32811863 56 2.53e-05 GCCACAGATC GAAGGGGA GGGAACAAGA chr8:129389412-129389492 50 2.53e-05 cacaagggtg gaagggga cccagaagtg chr1:105249404-105249484 54 2.53e-05 aactttgctg gaagggga cccaagggtt chr11:114217463-11421754 64 2.53e-05 ccacgcggtg gaagggga cccagaagg chr2:168401434-168401514 63 2.53e-05 ccatgtggtg gaagggga cccggaaggc chr5:18746279-18746359 73 2.53e-05 ccacgcagtg gaagggga chr4:133045183-133045263 49 2.53e-05 cgccgatgag gaagggga cccggaaggg chr2:4720683-4720763 65 2.53e-05 ccacgtagtg gaagggga cccgtaag chr2:108329429-108329509 18 4.38e-05 AATGTAACGT GAAAGAGA AAGTGAAAGT chr5:159028418-159028498 54 4.38e-05 gatgaagcaa gaaagaga ggaggagatg chr2:226329513-226329593 9 7.22e-05 TCATTTTG CAAAGGGA AGAGACGATC chr3:88238569-88238649 57 7.22e-05 ccacgcggtg gaaggaga cctggaaggt chr20:47717636-47717716 53 7.22e-05 TCACATTGTT GAAGGAGA TATTTCCAGT chr17:80377517-80377597 57 7.22e-05 AGGAGAAAGG CAAAGGGA GAAGCTTCTG chr10:94462149-94462229 36 7.22e-05 TGCCCTCCCT GAAGGAGA GGAGAGCCAT chr13:71865143-71865223 73 7.22e-05 ccacgaggtg gaaggaga chr22:30443455-30443535 60 8.31e-05 gtcccgccaa caagggga gctagagaga chr14:77420100-77420180 25 8.31e-05 CCCTGAGCTC CAAGGGGA GCCTCTTCCA chr11:122820165-12282024 15 1.01e-04 GGGGTGGCCT CAAAGAGA AAGTGAAACT chr2:159172697-159172777 25 1.01e-04 TGGCTGTCCT CAAAGAGA AAGTGAAAAT chr12:68630510-68630590 20 1.01e-04 CTAAACTCAC CAAAGAGA AAGTGAAAGT chr6:36354321-36354401 14 1.31e-04 CCACAGCACG GAAAGGAA AAGTGAAACC chr4:37074964-37075044 59 1.31e-04 tccatgtggt gaaagggg accctgaagg chr17:1992936-1993016 34 1.31e-04 GAACCAAGCA GAAAGGAA AACTGAAAGT chr8:22103577-22103657 16 1.31e-04 GAGTAGCCCA GAAAGGGG TGGGGTCAGG chr13:28278949-28279029 57 1.42e-04 ggggaggtga gagaggga attactgttt chr2:85116095-85116175 73 1.42e-04 gaggggacat gagaggga chr3:19188976-19189056 11 1.42e-04 AACGTTGGCC GAGAGGGA GTCCCCGCGG chr5:25569252-25569332 39 1.61e-04 aagcgaaagc gaaagtga aagtaaaagt chr9:110008687-110008767 15 1.61e-04 GGGCCTTCCT GAAAGTGA AAGTGAAAGT chr11:63304241-63304321 17 1.61e-04 GTGTCAAAAG GAAAGTGA AAGTGAAATT chr1:161014742-161014822 69 1.75e-04 AGTAACGCTG CAAGGAGA TCCC chr11:46582395-46582475 19 2.12e-04 CTTAACCCCA GAAACGGA AACTGAAACC chr9:114857339-114857419 4 2.58e-04 ATA GAAAGAAA TGCCTCCTAG chr4:186530465-186530545 66 2.58e-04 ATGTAGATGA GAAAGAAA GATCTTG chr17:75606383-75606463 27 2.58e-04 tttatggaca gaaagagg aaatcgacta chr6:169251982-169252062 25 2.58e-04 TATCTTCTGA GAAAGAAA ATGAAAGTGA chr13:33105047-33105127 45 2.58e-04 ctttcacttt gaaagaaa tcagctgtct chr4:119771776-119771856 13 2.58e-04 GAGGGGCCAA GAAAGAGG ATACAGGAAG chr22:36556818-36556898 29 3.05e-04 CCTGGAACCC AAAAGGGA AAGTGAAAGT chr1:225127893-225127973 36 3.05e-04 gcttagcttt aaaaggga aagtgaaacc chr8:81344846-81344926 11 3.27e-04 aacaaaccga ggaaggga cgaagggaaa chr8:18613392-18613472 65 3.27e-04 GGGGAGGGCA GAAGCGGA AACACGCC chr5:5025939-5026019 73 3.27e-04 tccacttggt ggaaggga chr8:145060604-145060684 39 4.04e-04 CTGAAAGACG GAAGGAGG GAGGGAGCAG chr17:62092425-62092505 15 4.04e-04 caaatttata gaaacaga aagtgaaaca chr13:44848666-44848746 2 4.04e-04 g gaaacaga aagtgaaagc chr20:5059260-5059340 14 4.40e-04 aggaccgtgg cagaggga aagtgaaact chr13:28029596-28029676 43 4.67e-04 ATGACCTTAC CAAAGTGA AAGTGAAAGC chr6:33281797-33281877 8 5.02e-04 GAGCAGA GACAGGGA CTTCATGGCG chrX:154862266-154862346 24 5.02e-04 ataaggttcc aaaagaga aagtgaaagt chr21:25260138-25260218 9 5.67e-04 aaggggga caagggaa cctttccagt chr3:40242408-40242488 16 6.13e-04 aatcctgagt caaagaaa aaacgaaagt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:20382353-20382433 1.4e-05 24_[+4]_48 chr1:193387727-193387807 1.4e-05 8_[+4]_64 chr8:29356971-29357051 1.4e-05 40_[+4]_32 chr6:32811783-32811863 2.5e-05 55_[+4]_17 chr8:129389412-129389492 2.5e-05 49_[+4]_23 chr1:105249404-105249484 2.5e-05 53_[+4]_19 chr11:114217463-11421754 2.5e-05 63_[+4]_9 chr2:168401434-168401514 2.5e-05 62_[+4]_10 chr5:18746279-18746359 2.5e-05 72_[+4] chr4:133045183-133045263 2.5e-05 48_[+4]_24 chr2:4720683-4720763 2.5e-05 64_[+4]_8 chr2:108329429-108329509 4.4e-05 17_[+4]_55 chr5:159028418-159028498 4.4e-05 53_[+4]_19 chr2:226329513-226329593 7.2e-05 8_[+4]_64 chr3:88238569-88238649 7.2e-05 56_[+4]_16 chr20:47717636-47717716 7.2e-05 52_[+4]_20 chr17:80377517-80377597 7.2e-05 56_[+4]_16 chr10:94462149-94462229 7.2e-05 35_[+4]_37 chr13:71865143-71865223 7.2e-05 72_[+4] chr22:30443455-30443535 8.3e-05 59_[+4]_13 chr14:77420100-77420180 8.3e-05 24_[+4]_48 chr11:122820165-12282024 0.0001 14_[+4]_58 chr2:159172697-159172777 0.0001 24_[+4]_48 chr12:68630510-68630590 0.0001 19_[+4]_53 chr6:36354321-36354401 0.00013 13_[+4]_59 chr4:37074964-37075044 0.00013 58_[+4]_14 chr17:1992936-1993016 0.00013 33_[+4]_39 chr8:22103577-22103657 0.00013 15_[+4]_57 chr13:28278949-28279029 0.00014 56_[+4]_16 chr2:85116095-85116175 0.00014 72_[+4] chr3:19188976-19189056 0.00014 10_[+4]_62 chr5:25569252-25569332 0.00016 38_[+4]_34 chr9:110008687-110008767 0.00016 14_[+4]_58 chr11:63304241-63304321 0.00016 16_[+4]_56 chr1:161014742-161014822 0.00017 68_[+4]_4 chr11:46582395-46582475 0.00021 18_[+4]_54 chr9:114857339-114857419 0.00026 3_[+4]_69 chr4:186530465-186530545 0.00026 65_[+4]_7 chr17:75606383-75606463 0.00026 26_[+4]_46 chr6:169251982-169252062 0.00026 24_[+4]_48 chr13:33105047-33105127 0.00026 44_[+4]_28 chr4:119771776-119771856 0.00026 12_[+4]_60 chr22:36556818-36556898 0.00031 28_[+4]_44 chr1:225127893-225127973 0.00031 35_[+4]_37 chr8:81344846-81344926 0.00033 10_[+4]_62 chr8:18613392-18613472 0.00033 64_[+4]_8 chr5:5025939-5026019 0.00033 72_[+4] chr8:145060604-145060684 0.0004 38_[+4]_34 chr17:62092425-62092505 0.0004 14_[+4]_58 chr13:44848666-44848746 0.0004 1_[+4]_71 chr20:5059260-5059340 0.00044 13_[+4]_59 chr13:28029596-28029676 0.00047 42_[+4]_30 chr6:33281797-33281877 0.0005 7_[+4]_65 chrX:154862266-154862346 0.0005 23_[+4]_49 chr21:25260138-25260218 0.00057 8_[+4]_64 chr3:40242408-40242488 0.00061 15_[+4]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAAAGRGA width=8 seqs=56 chr11:20382353-20382433 ( 25) GAAAGGGA 1 chr1:193387727-193387807 ( 9) GAAAGGGA 1 chr8:29356971-29357051 ( 41) GAAAGGGA 1 chr6:32811783-32811863 ( 56) GAAGGGGA 1 chr8:129389412-129389492 ( 50) GAAGGGGA 1 chr1:105249404-105249484 ( 54) GAAGGGGA 1 chr11:114217463-11421754 ( 64) GAAGGGGA 1 chr2:168401434-168401514 ( 63) GAAGGGGA 1 chr5:18746279-18746359 ( 73) GAAGGGGA 1 chr4:133045183-133045263 ( 49) GAAGGGGA 1 chr2:4720683-4720763 ( 65) GAAGGGGA 1 chr2:108329429-108329509 ( 18) GAAAGAGA 1 chr5:159028418-159028498 ( 54) GAAAGAGA 1 chr2:226329513-226329593 ( 9) CAAAGGGA 1 chr3:88238569-88238649 ( 57) GAAGGAGA 1 chr20:47717636-47717716 ( 53) GAAGGAGA 1 chr17:80377517-80377597 ( 57) CAAAGGGA 1 chr10:94462149-94462229 ( 36) GAAGGAGA 1 chr13:71865143-71865223 ( 73) GAAGGAGA 1 chr22:30443455-30443535 ( 60) CAAGGGGA 1 chr14:77420100-77420180 ( 25) CAAGGGGA 1 chr11:122820165-12282024 ( 15) CAAAGAGA 1 chr2:159172697-159172777 ( 25) CAAAGAGA 1 chr12:68630510-68630590 ( 20) CAAAGAGA 1 chr6:36354321-36354401 ( 14) GAAAGGAA 1 chr4:37074964-37075044 ( 59) GAAAGGGG 1 chr17:1992936-1993016 ( 34) GAAAGGAA 1 chr8:22103577-22103657 ( 16) GAAAGGGG 1 chr13:28278949-28279029 ( 57) GAGAGGGA 1 chr2:85116095-85116175 ( 73) GAGAGGGA 1 chr3:19188976-19189056 ( 11) GAGAGGGA 1 chr5:25569252-25569332 ( 39) GAAAGTGA 1 chr9:110008687-110008767 ( 15) GAAAGTGA 1 chr11:63304241-63304321 ( 17) GAAAGTGA 1 chr1:161014742-161014822 ( 69) CAAGGAGA 1 chr11:46582395-46582475 ( 19) GAAACGGA 1 chr9:114857339-114857419 ( 4) GAAAGAAA 1 chr4:186530465-186530545 ( 66) GAAAGAAA 1 chr17:75606383-75606463 ( 27) GAAAGAGG 1 chr6:169251982-169252062 ( 25) GAAAGAAA 1 chr13:33105047-33105127 ( 45) GAAAGAAA 1 chr4:119771776-119771856 ( 13) GAAAGAGG 1 chr22:36556818-36556898 ( 29) AAAAGGGA 1 chr1:225127893-225127973 ( 36) AAAAGGGA 1 chr8:81344846-81344926 ( 11) GGAAGGGA 1 chr8:18613392-18613472 ( 65) GAAGCGGA 1 chr5:5025939-5026019 ( 73) GGAAGGGA 1 chr8:145060604-145060684 ( 39) GAAGGAGG 1 chr17:62092425-62092505 ( 15) GAAACAGA 1 chr13:44848666-44848746 ( 2) GAAACAGA 1 chr20:5059260-5059340 ( 14) CAGAGGGA 1 chr13:28029596-28029676 ( 43) CAAAGTGA 1 chr6:33281797-33281877 ( 8) GACAGGGA 1 chrX:154862266-154862346 ( 24) AAAAGAGA 1 chr21:25260138-25260218 ( 9) CAAGGGAA 1 chr3:40242408-40242488 ( 16) CAAAGAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.95106 E= 1.1e-001 -239 -1 175 -1245 178 -1245 -261 -1245 169 -359 -161 -1245 127 -1245 56 -1245 -1245 -159 209 -1245 41 -1245 135 -200 -98 -1245 198 -1245 169 -1245 -129 -1245 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 56 E= 1.1e-001 0.053571 0.214286 0.732143 0.000000 0.964286 0.000000 0.035714 0.000000 0.910714 0.017857 0.071429 0.000000 0.678571 0.000000 0.321429 0.000000 0.000000 0.071429 0.928571 0.000000 0.375000 0.000000 0.553571 0.071429 0.142857 0.000000 0.857143 0.000000 0.910714 0.000000 0.089286 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAAAGRGA MEME-4 regular expression -------------------------------------------------------------------------------- [GC]AA[AG]G[GA]GA -------------------------------------------------------------------------------- Time 14.41 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCWGSM MEME-5 width = 8 sites = 20 llr = 185 E-value = 6.2e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::4::5 pos.-specific C a::a2:66 probability G ::a::a4: matrix T ::::5::: bits 2.2 * ** * 2.0 * ** * 1.8 **** * 1.6 **** * Relative 1.3 **** ** Entropy 1.1 **** *** (13.4 bits) 0.9 **** *** 0.7 **** *** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGCTGCC consensus A GA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:10517673-10517753 40 8.16e-06 aagtgaaagt cagctgcc ctggaagcta chr3:128523196-128523276 10 8.16e-06 ttcagagaa cAGCTGCC CCTTTCCTTT chr11:46582395-46582475 36 8.16e-06 AAACTGAAAC CAGCTGCC TCAAACAGAC chr12:68630510-68630590 3 8.16e-06 AT CAGCTGCC TAAACTCACC chr4:17387207-17387287 11 1.62e-05 acacacttga cagcagcc tcccaaaaac chr16:50732022-50732102 61 1.62e-05 CGGGGCACTG CAGCAGCC CTTGTCCACA chr22:30443455-30443535 32 2.45e-05 cctccttagc cagctggc cttctgatag chr3:121151152-121151232 27 2.45e-05 TAGCTCTCCC CAGCTGGC GCCTATTTTC chr2:9971068-9971148 73 4.34e-05 ACCAGGCTAC CAGCAGGC chr14:77420100-77420180 8 4.34e-05 AGGCCGC CAGCAGGC CCTGAGCTCC chr2:133058324-133058404 13 5.40e-05 catcagcaaa cagcagca gtttcacttt chr2:85116095-85116175 10 5.40e-05 tcactcaga cagcagca cggaagggaa chr5:96212150-96212230 65 5.40e-05 GTCAAATCTG CAGCAGCA TGATTTAA chr17:75606383-75606463 71 7.10e-05 ggtacagaaa cagctgga tt chr22:36044378-36044458 41 7.10e-05 CTGAAAGTGA CAGCTGGA GCCCATGATT chr5:81074984-81075064 69 7.10e-05 acagcacaga cagccgcc gtgc chr16:19106494-19106574 64 7.10e-05 ggtacagaaa cagctgga ttggttaca chr16:18957415-18957495 56 8.17e-05 CTAAATTGCT CAGCAGGA ATCTGATAAG chr14:86400965-86401045 73 9.61e-05 acaaatcttg cagccgca chr5:18746279-18746359 5 9.61e-05 tgtg cagccgca cgatctatta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:10517673-10517753 8.2e-06 39_[+5]_33 chr3:128523196-128523276 8.2e-06 9_[+5]_63 chr11:46582395-46582475 8.2e-06 35_[+5]_37 chr12:68630510-68630590 8.2e-06 2_[+5]_70 chr4:17387207-17387287 1.6e-05 10_[+5]_62 chr16:50732022-50732102 1.6e-05 60_[+5]_12 chr22:30443455-30443535 2.5e-05 31_[+5]_41 chr3:121151152-121151232 2.5e-05 26_[+5]_46 chr2:9971068-9971148 4.3e-05 72_[+5] chr14:77420100-77420180 4.3e-05 7_[+5]_65 chr2:133058324-133058404 5.4e-05 12_[+5]_60 chr2:85116095-85116175 5.4e-05 9_[+5]_63 chr5:96212150-96212230 5.4e-05 64_[+5]_8 chr17:75606383-75606463 7.1e-05 70_[+5]_2 chr22:36044378-36044458 7.1e-05 40_[+5]_32 chr5:81074984-81075064 7.1e-05 68_[+5]_4 chr16:19106494-19106574 7.1e-05 63_[+5]_9 chr16:18957415-18957495 8.2e-05 55_[+5]_17 chr14:86400965-86401045 9.6e-05 72_[+5] chr5:18746279-18746359 9.6e-05 4_[+5]_68 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCWGSM width=8 seqs=20 chr12:10517673-10517753 ( 40) CAGCTGCC 1 chr3:128523196-128523276 ( 10) CAGCTGCC 1 chr11:46582395-46582475 ( 36) CAGCTGCC 1 chr12:68630510-68630590 ( 3) CAGCTGCC 1 chr4:17387207-17387287 ( 11) CAGCAGCC 1 chr16:50732022-50732102 ( 61) CAGCAGCC 1 chr22:30443455-30443535 ( 32) CAGCTGGC 1 chr3:121151152-121151232 ( 27) CAGCTGGC 1 chr2:9971068-9971148 ( 73) CAGCAGGC 1 chr14:77420100-77420180 ( 8) CAGCAGGC 1 chr2:133058324-133058404 ( 13) CAGCAGCA 1 chr2:85116095-85116175 ( 10) CAGCAGCA 1 chr5:96212150-96212230 ( 65) CAGCAGCA 1 chr17:75606383-75606463 ( 71) CAGCTGGA 1 chr22:36044378-36044458 ( 41) CAGCTGGA 1 chr5:81074984-81075064 ( 69) CAGCCGCC 1 chr16:19106494-19106574 ( 64) CAGCTGGA 1 chr16:18957415-18957495 ( 56) CAGCAGGA 1 chr14:86400965-86401045 ( 73) CAGCCGCA 1 chr5:18746279-18746359 ( 5) CAGCCGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.26574 E= 6.2e+000 -1097 221 -1097 -1097 183 -1097 -1097 -1097 -1097 -1097 220 -1097 -1097 221 -1097 -1097 51 -52 -1097 66 -1097 -1097 220 -1097 -1097 148 88 -1097 68 135 -1097 -1097 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 20 E= 6.2e+000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.400000 0.150000 0.000000 0.450000 0.000000 0.000000 1.000000 0.000000 0.000000 0.600000 0.400000 0.000000 0.450000 0.550000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCWGSM MEME-5 regular expression -------------------------------------------------------------------------------- CAGC[TA]G[CG][CA] -------------------------------------------------------------------------------- Time 17.48 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:4720683-4720763 2.51e-05 14_[+2(4.24e-05)]_15_[+2(4.24e-05)]_\ 5_[+3(7.54e-05)]_6_[+4(2.53e-05)]_8 chr6:68071371-68071451 1.35e-02 46_[+2(2.42e-05)]_26 chr2:6973368-6973448 2.16e-03 1_[+4(4.38e-05)]_6_[+4(1.43e-05)]_4_\ [+4(4.38e-05)]_4_[+4(4.38e-05)]_4_[+4(4.38e-05)]_21 chr22:46454148-46454228 5.60e-02 80 chr16:56643605-56643685 1.88e-03 21_[+1(6.83e-05)]_51 chr19:12425536-12425616 1.30e-01 29_[+2(4.24e-05)]_43 chr1:67399928-67400008 2.09e-02 30_[+2(9.74e-05)]_42 chr18:65085532-65085612 7.37e-05 26_[+2(2.42e-05)]_46 chr8:129394299-129394379 2.79e-03 8_[+2(2.42e-05)]_64 chr1:35540768-35540848 1.31e-01 80 chr14:64733118-64733198 7.07e-02 8_[+2(9.74e-05)]_64 chr12:68630510-68630590 4.42e-05 2_[+5(8.16e-06)]_17_[+2(2.42e-05)]_\ 45 chr3:182920268-182920348 8.72e-03 34_[+2(2.42e-05)]_38 chr11:10324487-10324567 8.30e-03 5_[+2(9.74e-05)]_67 chr14:77420100-77420180 6.24e-07 7_[+5(4.34e-05)]_9_[+4(8.31e-05)]_\ 17_[+3(1.83e-05)]_23 chr19:42553350-42553430 2.46e-04 21_[+2(2.42e-05)]_51 chr4:133045183-133045263 1.68e-03 15_[+2(4.24e-05)]_25_[+4(2.53e-05)]_\ 24 chr5:159028418-159028498 3.01e-03 8_[+2(2.42e-05)]_37_[+4(4.38e-05)]_\ 19 chr5:179263878-179263958 5.44e-04 36_[+1(2.45e-05)]_36 chr8:119933319-119933399 3.27e-03 44_[+3(1.83e-05)]_28 chr7:156828145-156828225 7.74e-02 80 chr1:161014742-161014822 1.06e-02 38_[+2(2.42e-05)]_34 chr3:88081074-88081154 1.92e-04 28_[+1(2.45e-05)]_44 chr16:50732022-50732102 9.94e-05 33_[+1(2.45e-05)]_19_[+5(1.62e-05)]_\ 12 chr13:44848666-44848746 4.95e-03 9_[+2(2.42e-05)]_63 chr4:119771776-119771856 1.60e-03 55_[+1(2.45e-05)]_17 chr3:62431144-62431224 2.96e-03 35_[+2(2.42e-05)]_37 chr4:17387207-17387287 1.09e-04 10_[+5(1.62e-05)]_12_[+2(2.42e-05)]_\ 42 chr5:176541714-176541794 7.79e-04 45_[+3(1.83e-05)]_27 chr8:67447420-67447500 1.66e-03 28_[+1(2.45e-05)]_11_[+3(1.83e-05)]_\ 10_[+3(1.83e-05)]_7 chr3:169995772-169995852 2.37e-03 59_[+3(1.83e-05)]_13 chr12:118498603-11849868 5.54e-03 46_[+2(2.42e-05)]_26 chr2:166759591-166759671 3.56e-04 6_[+4(4.38e-05)]_66 chr2:149310691-149310771 2.33e-04 34_[+2(2.42e-05)]_38 chrX:154862266-154862346 1.10e-02 31_[+2(2.42e-05)]_41 chr12:58359803-58359883 3.16e-03 53_[+3(1.83e-05)]_19 chr20:5059260-5059340 5.67e-03 21_[+2(2.42e-05)]_51 chr1:225127893-225127973 3.87e-03 43_[+2(2.42e-05)]_29 chr2:102872852-102872932 1.09e-03 33_[+3(1.83e-05)]_39 chr7:12297398-12297478 3.09e-02 71_[+2(2.42e-05)]_1 chr4:10585741-10585821 8.04e-05 42_[+3(1.83e-05)]_30 chr5:18746279-18746359 1.10e-06 4_[+5(9.61e-05)]_10_[+2(2.42e-05)]_\ 9_[+2(2.42e-05)]_11_[+3(7.54e-05)]_6_[+4(2.53e-05)] chr8:22103577-22103657 6.86e-02 80 chr11:63304241-63304321 3.29e-03 18_[+2(2.42e-05)]_54 chr12:97113957-97114037 2.35e-03 29_[+1(2.45e-05)]_43 chr14:65548258-65548338 1.62e-02 19_[+1(6.83e-05)]_53 chr8:29356971-29357051 4.13e-04 40_[+4(1.43e-05)]_[+2(2.42e-05)]_24 chr1:212016642-212016722 1.57e-05 9_[+2(2.42e-05)]_18_[+3(1.83e-05)]_\ 37 chr13:31147042-31147122 1.04e-03 44_[+1(2.45e-05)]_28 chrX:87155770-87155850 3.45e-03 29_[+3(1.83e-05)]_43 chr21:36901616-36901696 1.40e-03 34_[+3(1.83e-05)]_38 chr11:38637819-38637899 4.39e-03 43_[+3(6.47e-05)]_19_[+1(2.45e-05)]_\ 2 chr10:77532175-77532255 1.18e-01 80 chr12:34279242-34279322 8.11e-04 54_[+3(1.83e-05)]_18 chr19:44599473-44599553 2.61e-03 80 chr19:18197785-18197865 2.09e-03 17_[+2(2.42e-05)]_55 chr17:26135156-26135236 6.96e-02 46_[+1(6.83e-05)]_26 chr1:23445879-23445959 1.13e-03 18_[+2(2.42e-05)]_54 chr5:114404368-114404448 3.42e-02 23_[+2(4.24e-05)]_49 chr10:90734839-90734919 4.17e-03 37_[+2(2.42e-05)]_35 chr4:164317087-164317167 1.10e-02 28_[+1(2.45e-05)]_44 chr16:67970735-67970815 4.37e-02 29_[+1(4.35e-05)]_43 chr7:33231061-33231141 7.67e-04 25_[+1(2.45e-05)]_47 chr4:6753354-6753434 8.47e-03 27_[+2(2.42e-05)]_45 chr2:168401434-168401514 4.02e-05 18_[+2(4.24e-05)]_3_[+2(9.74e-05)]_\ 25_[+4(2.53e-05)]_10 chr11:114217463-11421754 1.79e-05 36_[+2(2.42e-05)]_5_[+3(7.54e-05)]_\ 6_[+4(2.53e-05)]_9 chr9:14992173-14992253 1.74e-01 80 chr10:90844297-90844377 3.94e-03 41_[+2(2.42e-05)]_31 chr7:36352304-36352384 3.94e-02 80 chr1:229439742-229439822 7.97e-03 37_[+1(2.45e-05)]_35 chr5:5025939-5026019 5.43e-06 23_[+2(4.24e-05)]_15_[+2(4.24e-05)]_\ 5_[+3(7.54e-05)]_13 chr4:153477669-153477749 3.96e-03 41_[+1(4.35e-05)]_31 chr17:1992936-1993016 1.48e-02 41_[+2(6.62e-05)]_31 chr20:3913513-3913593 1.02e-04 33_[+3(1.83e-05)]_39 chr9:96263707-96263787 5.30e-04 21_[+1(2.45e-05)]_51 chr13:33105047-33105127 5.17e-06 27_[+3(8.97e-05)]_[+1(2.45e-05)]_37 chr17:77826756-77826836 3.09e-04 30_[+1(2.45e-05)]_19_[+2(9.74e-05)]_\ 15 chr11:32017461-32017541 1.48e-03 48_[+3(7.54e-05)]_24 chr3:121151152-121151232 2.00e-05 26_[+5(2.45e-05)]_10_[+3(1.83e-05)]_\ 28 chr5:143571719-143571799 1.29e-02 25_[+1(6.83e-05)]_47 chr2:85518638-85518718 8.18e-01 80 chr1:105249404-105249484 2.69e-03 25_[+2(4.24e-05)]_20_[+4(2.53e-05)]_\ 19 chr3:118570846-118570926 1.23e-01 15_[+1(4.35e-05)]_2_[+1(4.35e-05)]_\ 47 chr16:19106494-19106574 3.27e-04 35_[+2(2.42e-05)]_20_[+5(7.10e-05)]_\ 9 chr22:30443455-30443535 1.94e-04 [+2(6.62e-05)]_23_[+5(2.45e-05)]_20_\ [+4(8.31e-05)]_13 chr13:71865143-71865223 3.91e-05 28_[+2(2.42e-05)]_3_[+2(2.42e-05)]_\ 11_[+3(7.54e-05)]_6_[+4(7.22e-05)] chr15:51649325-51649405 1.58e-03 52_[+1(4.35e-05)]_7_[+3(1.83e-05)]_\ 5 chr2:176432576-176432656 6.04e-02 23_[+2(6.62e-05)]_49 chrX:119259473-119259553 5.65e-04 56_[+3(1.83e-05)]_16 chr10:94462149-94462229 1.32e-03 11_[+2(2.42e-05)]_16_[+4(7.22e-05)]_\ 37 chr9:110008687-110008767 9.90e-03 16_[+2(2.42e-05)]_56 chr10:44118960-44119040 3.59e-03 17_[+2(2.42e-05)]_55 chr7:113688489-113688569 1.05e-02 10_[+2(2.42e-05)]_62 chr21:44821867-44821947 1.14e-02 44_[+2(2.42e-05)]_28 chr9:33025766-33025846 5.36e-03 26_[+1(4.35e-05)]_46 chr17:80377517-80377597 5.17e-03 27_[+2(6.62e-05)]_21_[+4(7.22e-05)]_\ 16 chr11:61783211-61783291 1.07e-02 20_[+2(2.42e-05)]_52 chr11:39392896-39392976 1.69e-03 42_[+3(1.83e-05)]_9_[+3(1.83e-05)]_\ 13 chr17:43304593-43304673 2.74e-03 22_[+2(2.42e-05)]_50 chr5:25569252-25569332 4.01e-05 11_[+2(2.42e-05)]_9_[+2(4.24e-05)]_\ 4_[+2(2.42e-05)]_32 chr13:28029596-28029676 1.63e-05 44_[+2(2.42e-05)]_28 chr15:59274168-59274248 1.05e-03 63_[+1(2.45e-05)]_9 chr1:33427989-33428069 3.64e-03 29_[+2(2.42e-05)]_43 chr8:117396766-117396846 2.65e-02 29_[+2(4.24e-05)]_43 chr2:220252318-220252398 4.47e-02 49_[+1(4.35e-05)]_23 chr6:119788795-119788875 3.00e-02 23_[+1(4.35e-05)]_49 chr8:117484981-117485061 4.99e-02 24_[+2(6.62e-05)]_48 chr20:52384238-52384318 2.14e-01 80 chr2:108329429-108329509 5.18e-03 17_[+4(4.38e-05)]_[+2(2.42e-05)]_47 chr21:15975049-15975129 1.55e-05 67_[+3(1.83e-05)]_5 chr22:36556818-36556898 7.81e-04 36_[+2(2.42e-05)]_36 chr12:14369456-14369536 1.15e-04 61_[+3(1.83e-05)]_11 chr10:17549236-17549316 5.17e-03 55_[+3(7.54e-05)]_[+1(4.35e-05)]_9 chr1:228328986-228329066 2.80e-03 37_[+2(2.42e-05)]_35 chrX:120281428-120281508 2.12e-03 40_[+1(2.45e-05)]_32 chr10:28467417-28467497 7.51e-02 18_[+2(9.74e-05)]_54 chr5:81074984-81075064 3.71e-04 19_[+2(2.42e-05)]_41_[+5(7.10e-05)]_\ 4 chr4:18059179-18059259 1.06e-01 80 chr3:183259643-183259723 4.91e-03 51_[+3(6.47e-05)]_21 chr17:46590669-46590749 1.16e-04 40_[+2(2.42e-05)]_32 chr3:138500132-138500212 1.13e-01 28_[+2(9.74e-05)]_44 chr22:36044378-36044458 5.28e-04 28_[+2(6.62e-05)]_4_[+5(7.10e-05)]_\ 32 chr6:169251982-169252062 2.78e-04 36_[+2(2.42e-05)]_36 chr4:159530232-159530312 3.69e-04 44_[+3(1.83e-05)]_28 chr16:86020820-86020900 3.11e-04 51_[+3(6.47e-05)]_[+1(2.45e-05)]_13 chr4:123578121-123578201 1.28e-01 80 chr8:103299683-103299763 7.72e-03 50_[+3(1.83e-05)]_22 chr2:156403858-156403938 4.10e-04 41_[+3(1.83e-05)]_31 chr10:15251086-15251166 2.44e-01 80 chr1:31960208-31960288 4.00e-01 80 chr16:18957415-18957495 3.92e-04 36_[+1(2.45e-05)]_11_[+5(8.17e-05)]_\ 17 chr2:41942903-41942983 8.13e-02 27_[+1(6.83e-05)]_45 chr11:46582395-46582475 7.25e-05 26_[+2(6.62e-05)]_1_[+5(8.16e-06)]_\ 37 chr4:37074964-37075044 5.12e-04 15_[+2(2.42e-05)]_57 chr3:118561299-118561379 2.13e-03 28_[+1(4.35e-05)]_1_[+3(1.83e-05)]_\ 35 chr6:25139121-25139201 6.16e-03 62_[+1(6.83e-05)]_10 chr2:159172697-159172777 3.76e-03 32_[+2(2.42e-05)]_40 chr20:47717636-47717716 5.93e-05 38_[+3(1.83e-05)]_6_[+4(7.22e-05)]_\ 20 chr6:143140899-143140979 3.61e-04 53_[+1(2.45e-05)]_19 chr1:65534315-65534395 2.28e-03 47_[+3(1.83e-05)]_25 chr6:36354321-36354401 1.39e-05 21_[+2(2.42e-05)]_51 chr15:50540113-50540193 1.85e-02 22_[+3(6.47e-05)]_50 chr8:18613392-18613472 2.23e-03 26_[+2(4.24e-05)]_46 chr8:10488028-10488108 8.69e-05 30_[+3(1.83e-05)]_42 chr18:36521324-36521404 1.27e-02 26_[+3(6.47e-05)]_11_[+1(4.35e-05)]_\ 27 chr8:124049927-124050007 3.88e-02 45_[+2(6.62e-05)]_27 chr22:36649100-36649180 8.70e-04 17_[+3(1.83e-05)]_55 chr12:68856769-68856849 4.05e-03 80 chr1:46528425-46528505 2.42e-01 51_[+1(6.83e-05)]_21 chr12:43089615-43089695 1.05e-03 36_[+3(1.83e-05)]_10_[+1(2.45e-05)]_\ 18 chr6:28108096-28108176 5.71e-04 9_[+2(6.62e-05)]_63 chr2:64994296-64994376 1.62e-06 9_[+2(2.42e-05)]_63 chr1:153861118-153861198 1.45e-03 13_[+4(4.38e-05)]_59 chr3:128523196-128523276 6.68e-06 9_[+5(8.16e-06)]_43_[+3(1.83e-05)]_\ 12 chr9:80747717-80747797 1.28e-03 59_[+3(1.83e-05)]_13 chr11:46237662-46237742 1.47e-02 45_[+2(6.62e-05)]_27 chr1:89594655-89594735 6.76e-03 23_[+2(2.42e-05)]_49 chr4:159870414-159870494 6.73e-03 27_[+3(8.97e-05)]_[+1(2.45e-05)]_37 chr5:89908886-89908966 1.37e-03 34_[+3(1.83e-05)]_38 chr18:74920987-74921067 2.41e-03 39_[+1(2.45e-05)]_33 chr6:33281797-33281877 1.10e-04 66_[+3(1.83e-05)]_6 chr10:120891285-12089136 2.82e-03 36_[+2(2.42e-05)]_36 chr18:53144914-53144994 9.19e-05 25_[+3(1.83e-05)]_47 chr17:48498921-48499001 4.16e-03 21_[+1(2.45e-05)]_51 chr17:77707017-77707097 2.53e-02 31_[+2(6.62e-05)]_41 chr5:96212150-96212230 5.82e-05 25_[+2(2.42e-05)]_31_[+5(5.40e-05)]_\ 8 chr3:40242408-40242488 2.04e-03 29_[+2(2.42e-05)]_43 chr7:21392620-21392700 5.59e-02 80 chr1:83530435-83530515 7.99e-04 38_[+3(1.83e-05)]_34 chr21:25260138-25260218 8.57e-05 29_[+3(1.83e-05)]_43 chr9:94696408-94696488 1.18e-01 80 chr3:45185940-45186020 4.88e-04 6_[+4(1.43e-05)]_66 chr8:123931376-123931456 2.90e-03 44_[+1(2.45e-05)]_28 chr10:92980466-92980546 1.97e-03 59_[+1(2.45e-05)]_13 chr1:193387727-193387807 2.20e-03 [+2(6.62e-05)]_[+4(1.43e-05)]_\ [+2(2.42e-05)]_56 chr6:164817834-164817914 1.53e-04 35_[+2(2.42e-05)]_37 chr4:89300512-89300592 2.59e-03 80 chr2:108888489-108888569 2.61e-02 80 chr15:97433361-97433441 7.96e-03 31_[+1(2.45e-05)]_41 chr12:24948804-24948884 2.34e-03 38_[+3(1.83e-05)]_34 chr17:62092425-62092505 9.01e-03 22_[+2(2.42e-05)]_50 chr2:113525747-113525827 1.06e-03 48_[+3(1.83e-05)]_24 chrX:40504126-40504206 5.06e-04 29_[+2(2.42e-05)]_43 chr1:155607345-155607425 5.69e-03 40_[+2(2.42e-05)]_3_[+2(2.42e-05)]_\ 21 chr1:42357330-42357410 8.99e-03 32_[+3(6.47e-05)]_40 chr3:122399619-122399699 4.75e-03 39_[+2(4.24e-05)]_33 chr14:86400965-86401045 4.90e-05 35_[+1(2.45e-05)]_9_[+1(2.45e-05)]_\ 12_[+5(9.61e-05)] chr12:108496288-10849636 6.40e-03 56_[+3(6.47e-05)]_16 chr8:145060604-145060684 1.98e-03 20_[+2(2.42e-05)]_52 chr3:88238569-88238649 7.16e-05 29_[+2(2.42e-05)]_5_[+3(7.54e-05)]_\ 6_[+4(7.22e-05)]_16 chr1:118277816-118277896 7.26e-04 36_[+1(2.45e-05)]_36 chr3:141405705-141405785 1.11e-03 45_[+2(2.42e-05)]_27 chr1:179098955-179099035 3.04e-05 34_[+3(1.83e-05)]_38 chr14:63920465-63920545 1.00e-02 80 chr22:36552969-36553049 2.76e-03 30_[+1(2.45e-05)]_42 chr4:111040765-111040845 3.41e-03 50_[+3(1.83e-05)]_22 chr8:81344846-81344926 7.12e-03 26_[+2(6.62e-05)]_46 chr11:102183610-10218369 3.57e-03 38_[+3(1.83e-05)]_[+1(6.83e-05)]_26 chr19:52333602-52333682 1.05e-02 80 chr15:56760886-56760966 1.84e-03 28_[+3(1.83e-05)]_44 chr21:37632923-37633003 7.55e-02 80 chr11:59434578-59434658 5.67e-03 40_[+1(2.45e-05)]_32 chr17:75606383-75606463 5.87e-04 48_[+2(4.24e-05)]_14_[+5(7.10e-05)]_\ 2 chr11:20382353-20382433 8.21e-04 24_[+4(1.43e-05)]_9_[+4(1.43e-05)]_\ [+2(2.42e-05)]_23 chr4:186530465-186530545 1.97e-05 25_[+3(1.83e-05)]_47 chr1:248070101-248070181 1.00e-03 20_[+2(2.42e-05)]_52 chr11:122820165-12282024 2.89e-03 22_[+2(2.42e-05)]_50 chr2:65126220-65126300 4.84e-04 50_[+3(1.83e-05)]_22 chr2:9971068-9971148 1.97e-04 40_[+1(6.83e-05)]_24_[+5(4.34e-05)] chr5:64778714-64778794 5.61e-05 17_[+3(1.83e-05)]_55 chr7:121081309-121081389 3.44e-04 56_[+3(1.83e-05)]_16 chr8:68418174-68418254 3.80e-03 35_[+3(1.83e-05)]_37 chr7:17182242-17182322 2.20e-04 49_[+3(1.83e-05)]_23 chr9:114857339-114857419 1.80e-02 24_[+2(9.74e-05)]_48 chr2:233228773-233228853 2.36e-03 31_[+2(2.42e-05)]_41 chr12:10517673-10517753 4.17e-05 23_[+2(2.42e-05)]_8_[+5(8.16e-06)]_\ 33 chr1:230305609-230305689 3.75e-04 50_[+2(2.42e-05)]_22 chr15:51199237-51199317 1.95e-02 16_[+2(4.24e-05)]_56 chr2:226329513-226329593 3.35e-03 8_[+4(7.22e-05)]_41_[+1(6.83e-05)]_\ 15 chr20:61436144-61436224 4.87e-03 26_[+1(4.35e-05)]_46 chr18:2641750-2641830 3.47e-01 80 chr3:3214476-3214556 1.81e-03 40_[+3(1.83e-05)]_32 chrX:146957501-146957581 9.05e-02 80 chr6:2369949-2370029 3.85e-02 5_[+2(6.62e-05)]_67 chr5:176727410-176727490 6.33e-03 45_[+1(6.83e-05)]_27 chr1:38993180-38993260 8.18e-02 51_[+1(6.83e-05)]_21 chr19:47217864-47217944 2.19e-03 10_[+2(2.42e-05)]_62 chr8:129389412-129389492 7.53e-04 4_[+2(2.42e-05)]_9_[+2(2.42e-05)]_\ 20_[+4(2.53e-05)]_23 chr2:109591219-109591299 2.06e-02 5_[+2(6.62e-05)]_67 chr3:58311335-58311415 5.25e-02 53_[+1(6.83e-05)]_19 chr11:34548122-34548202 4.07e-02 51_[+1(2.45e-05)]_21 chr7:103452549-103452629 4.51e-04 3_[+3(1.83e-05)]_11_[+3(1.83e-05)]_\ 18_[+3(1.83e-05)]_24 chr7:149019374-149019454 1.78e-01 80 chr1:170137646-170137726 1.11e-02 21_[+1(2.45e-05)]_51 chr4:185189236-185189316 3.26e-02 80 chr3:19188976-19189056 3.52e-02 80 chr2:157520438-157520518 1.23e-05 51_[+1(2.45e-05)]_21 chr2:85116095-85116175 2.82e-04 9_[+5(5.40e-05)]_18_[+2(2.42e-05)]_\ 37 chr13:28278949-28279029 7.47e-03 80 chr6:33546460-33546540 2.28e-03 61_[+1(2.45e-05)]_11 chr16:89328157-89328237 2.81e-02 55_[+1(4.35e-05)]_17 chr8:71126848-71126928 1.79e-02 21_[+2(4.24e-05)]_51 chr7:92747376-92747456 9.30e-03 42_[+1(6.83e-05)]_30 chr11:796324-796404 7.82e-05 2_[+3(6.47e-05)]_[+1(2.45e-05)]_62 chr2:133058324-133058404 1.07e-04 12_[+5(5.40e-05)]_1_[+1(2.45e-05)]_\ 51 chr13:41558936-41559016 3.25e-03 41_[+1(2.45e-05)]_31 chr6:32811783-32811863 2.71e-03 31_[+2(2.42e-05)]_16_[+4(2.53e-05)]_\ 17 chr5:130172455-130172535 8.11e-04 46_[+3(1.83e-05)]_26 chr14:24605377-24605457 1.31e-02 30_[+1(4.35e-05)]_42 chr5:115617121-115617201 1.28e-02 45_[+1(2.45e-05)]_3_[+1(2.45e-05)]_\ 16 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************