******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/IRF1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr17:33868218-33868298 1.0000 80 chr2:64994286-64994366 1.0000 80 chr1:161014752-161014832 1.0000 80 chr12:68630492-68630572 1.0000 80 chr19:42553346-42553426 1.0000 80 chr10:90734877-90734957 1.0000 80 chr17:1992951-1993031 1.0000 80 chr14:77420103-77420183 1.0000 80 chr5:179263877-179263957 1.0000 80 chr21:15975064-15975144 1.0000 80 chr16:67970739-67970819 1.0000 80 chr1:23445890-23445970 1.0000 80 chr3:88081039-88081119 1.0000 80 chr11:63304230-63304310 1.0000 80 chr17:80377532-80377612 1.0000 80 chr17:46590668-46590748 1.0000 80 chr3:4397213-4397293 1.0000 80 chr8:20875361-20875441 1.0000 80 chr2:102872861-102872941 1.0000 80 chr2:149310716-149310796 1.0000 80 chr11:128701171-12870125 1.0000 80 chr3:62431140-62431220 1.0000 80 chr8:29356980-29357060 1.0000 80 chr13:31147035-31147115 1.0000 80 chr16:18957425-18957505 1.0000 80 chr20:5059260-5059340 1.0000 80 chr1:33427987-33428067 1.0000 80 chr15:50540102-50540182 1.0000 80 chr6:26494483-26494563 1.0000 80 chr1:179098935-179099015 1.0000 80 chr3:193550051-193550131 1.0000 80 chr5:81074975-81075055 1.0000 80 chr1:65534324-65534404 1.0000 80 chr5:96212162-96212242 1.0000 80 chr12:13180104-13180184 1.0000 80 chr19:29228055-29228135 1.0000 80 chr12:108496288-10849636 1.0000 80 chr13:44848627-44848707 1.0000 80 chr11:102183606-10218368 1.0000 80 chr20:47717642-47717722 1.0000 80 chr10:44118963-44119043 1.0000 80 chr8:124049940-124050020 1.0000 80 chr22:36044382-36044462 1.0000 80 chr1:89594641-89594721 1.0000 80 chr11:46582380-46582460 1.0000 80 chrX:40504144-40504224 1.0000 80 chr20:3913502-3913582 1.0000 80 chr8:10488029-10488109 1.0000 80 chr1:222182602-222182682 1.0000 80 chr13:28029633-28029713 1.0000 80 chr6:33281833-33281913 1.0000 80 chr7:26196073-26196153 1.0000 80 chr21:37632933-37633013 1.0000 80 chr7:21392619-21392699 1.0000 80 chr11:57333761-57333841 1.0000 80 chr1:118277819-118277899 1.0000 80 chr8:90742285-90742365 1.0000 80 chr3:121151145-121151225 1.0000 80 chr1:46528409-46528489 1.0000 80 chr4:185338477-185338557 1.0000 80 chr11:14522054-14522134 1.0000 80 chr15:59274178-59274258 1.0000 80 chr1:248070099-248070179 1.0000 80 chr4:123745829-123745909 1.0000 80 chr10:120891280-12089136 1.0000 80 chr7:17182256-17182336 1.0000 80 chr15:68406837-68406917 1.0000 80 chr6:74364695-74364775 1.0000 80 chr3:151911478-151911558 1.0000 80 chr6:32822319-32822399 1.0000 80 chr1:59485972-59486052 1.0000 80 chr9:80747718-80747798 1.0000 80 chr19:47217866-47217946 1.0000 80 chr6:133134269-133134349 1.0000 80 chr8:123931374-123931454 1.0000 80 chr2:220252323-220252403 1.0000 80 chr8:145060603-145060683 1.0000 80 chr9:14992182-14992262 1.0000 80 chrX:154862259-154862339 1.0000 80 chr14:24605368-24605448 1.0000 80 chr12:42492028-42492108 1.0000 80 chr2:191888232-191888312 1.0000 80 chr11:20382355-20382435 1.0000 80 chr4:78656242-78656322 1.0000 80 chr7:6145726-6145806 1.0000 80 chr17:43304602-43304682 1.0000 80 chr8:103299707-103299787 1.0000 80 chr9:110008700-110008780 1.0000 80 chr22:36649079-36649159 1.0000 80 chr6:25139152-25139232 1.0000 80 chr9:102972435-102972515 1.0000 80 chr12:50665837-50665917 1.0000 80 chr22:36552965-36553045 1.0000 80 chr18:74921000-74921080 1.0000 80 chr1:36103098-36103178 1.0000 80 chr7:92747357-92747437 1.0000 80 chr7:120640143-120640223 1.0000 80 chr6:119788761-119788841 1.0000 80 chr20:61436142-61436222 1.0000 80 chr12:10517693-10517773 1.0000 80 chr3:128523206-128523286 1.0000 80 chr17:41158755-41158835 1.0000 80 chr5:64778708-64778788 1.0000 80 chr12:68856780-68856860 1.0000 80 chr10:3871221-3871301 1.0000 80 chr1:145097857-145097937 1.0000 80 chr9:96263669-96263749 1.0000 80 chr11:4414872-4414952 1.0000 80 chr2:85812952-85813032 1.0000 80 chr11:5255920-5256000 1.0000 80 chr7:12297391-12297471 1.0000 80 chr16:11406624-11406704 1.0000 80 chr4:82668454-82668534 1.0000 80 chr1:212112177-212112257 1.0000 80 chr3:183259651-183259731 1.0000 80 chr1:228328993-228329073 1.0000 80 chr2:196397883-196397963 1.0000 80 chr1:230305614-230305694 1.0000 80 chr9:108301874-108301954 1.0000 80 chr8:119933299-119933379 1.0000 80 chr7:121081320-121081400 1.0000 80 chr3:122283138-122283218 1.0000 80 chr2:9971045-9971125 1.0000 80 chr21:36901616-36901696 1.0000 80 chr1:242108276-242108356 1.0000 80 chr6:34625298-34625378 1.0000 80 chr19:10196906-10196986 1.0000 80 chr10:115439588-11543966 1.0000 80 chr6:27088839-27088919 1.0000 80 chr14:21924334-21924414 1.0000 80 chr5:10596040-10596120 1.0000 80 chr5:103425028-103425108 1.0000 80 chr2:44308638-44308718 1.0000 80 chr10:44090790-44090870 1.0000 80 chr15:45004824-45004904 1.0000 80 chr12:14369452-14369532 1.0000 80 chr16:53986496-53986576 1.0000 80 chr7:112897361-112897441 1.0000 80 chr16:68798973-68799053 1.0000 80 chr10:91061688-91061768 1.0000 80 chr10:91092182-91092262 1.0000 80 chr15:80364751-80364831 1.0000 80 chr14:55799474-55799554 1.0000 80 chr3:122399632-122399712 1.0000 80 chr1:155607364-155607444 1.0000 80 chr10:75677038-75677118 1.0000 80 chr6:163881740-163881820 1.0000 80 chr1:27998782-27998862 1.0000 80 chr17:57237706-57237786 1.0000 80 chr14:77428456-77428536 1.0000 80 chr11:5646099-5646179 1.0000 80 chr11:39392902-39392982 1.0000 80 chrX:41190937-41191017 1.0000 80 chr22:30443456-30443536 1.0000 80 chr6:32811793-32811873 1.0000 80 chr6:26440584-26440664 1.0000 80 chr6:169252007-169252087 1.0000 80 chr3:36949596-36949676 1.0000 80 chr15:70820701-70820781 1.0000 80 chr17:76976006-76976086 1.0000 80 chr21:17170040-17170120 1.0000 80 chr12:34279270-34279350 1.0000 80 chr6:27568801-27568881 1.0000 80 chr21:42792472-42792552 1.0000 80 chr18:53144906-53144986 1.0000 80 chr5:176727400-176727480 1.0000 80 chr8:107738259-107738339 1.0000 80 chr4:185189246-185189326 1.0000 80 chr20:52271654-52271734 1.0000 80 chr1:199901285-199901365 1.0000 80 chr10:91152238-91152318 1.0000 80 chr4:77903888-77903968 1.0000 80 chr17:48498917-48498997 1.0000 80 chr6:26402346-26402426 1.0000 80 chr2:171086395-171086475 1.0000 80 chr4:159870392-159870472 1.0000 80 chr11:114217490-11421757 1.0000 80 chr12:127568013-12756809 1.0000 80 chr14:58711924-58712004 1.0000 80 chr4:17387216-17387296 1.0000 80 chr10:6019530-6019610 1.0000 80 chr6:26365278-26365358 1.0000 80 chr8:61993355-61993435 1.0000 80 chr12:24948807-24948887 1.0000 80 chr22:36635607-36635687 1.0000 80 chr10:7210530-7210610 1.0000 80 chr20:388898-388978 1.0000 80 chr6:14075592-14075672 1.0000 80 chr20:40247058-40247138 1.0000 80 chr1:114402286-114402366 1.0000 80 chr8:121096954-121097034 1.0000 80 chr5:98369220-98369300 1.0000 80 chr1:169278942-169279022 1.0000 80 chr11:61783218-61783298 1.0000 80 chr2:152146417-152146497 1.0000 80 chr9:101899698-101899778 1.0000 80 chr17:26135171-26135251 1.0000 80 chr3:119813373-119813453 1.0000 80 chr22:18632785-18632865 1.0000 80 chr2:20776557-20776637 1.0000 80 chr4:6753383-6753463 1.0000 80 chr2:166759584-166759664 1.0000 80 chr6:18054021-18054101 1.0000 80 chr8:71126851-71126931 1.0000 80 chr17:56024342-56024422 1.0000 80 chr12:83550799-83550879 1.0000 80 chr19:49977426-49977506 1.0000 80 chr3:196001660-196001740 1.0000 80 chr3:197575130-197575210 1.0000 80 chr17:80293088-80293168 1.0000 80 chr7:100144515-100144595 1.0000 80 chr7:150104150-150104230 1.0000 80 chr4:8539072-8539152 1.0000 80 chr2:20100011-20100091 1.0000 80 chr14:91580936-91581016 1.0000 80 chr7:16473379-16473459 1.0000 80 chr7:142956039-142956119 1.0000 80 chr3:142935715-142935795 1.0000 80 chr8:73020421-73020501 1.0000 80 chrX:119259496-119259576 1.0000 80 chr9:126031140-126031220 1.0000 80 chr21:17104796-17104876 1.0000 80 chr2:63671878-63671958 1.0000 80 chr2:152144792-152144872 1.0000 80 chr7:107661128-107661208 1.0000 80 chr1:197701551-197701631 1.0000 80 chr14:64010115-64010195 1.0000 80 chr12:64853545-64853625 1.0000 80 chr1:205196950-205197030 1.0000 80 chr1:78224860-78224940 1.0000 80 chr3:40242404-40242484 1.0000 80 chr17:7145803-7145883 1.0000 80 chr4:15655184-15655264 1.0000 80 chr4:169401661-169401741 1.0000 80 chr7:134832737-134832817 1.0000 80 chr5:36419810-36419890 1.0000 80 chr6:146070895-146070975 1.0000 80 chr14:65565481-65565561 1.0000 80 chr2:183954286-183954366 1.0000 80 chr5:56111265-56111345 1.0000 80 chr19:3094295-3094375 1.0000 80 chr17:46386087-46386167 1.0000 80 chr5:138720912-138720992 1.0000 80 chr3:9958753-9958833 1.0000 80 chr16:11334726-11334806 1.0000 80 chr8:21777068-21777148 1.0000 80 chr6:32806533-32806613 1.0000 80 chr17:46662924-46663004 1.0000 80 chr5:34695835-34695915 1.0000 80 chr4:89300498-89300578 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_IRF1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/IRF1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.276 C 0.232 G 0.217 T 0.275 Background letter frequencies (from file dataset with add-one prior applied): A 0.276 C 0.232 G 0.217 T 0.275 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TTTCACTT MEME-1 width = 8 sites = 130 llr = 1184 E-value = 1.3e-176 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::::8::: pos.-specific C :::a:7:: probability G ::::22:: matrix T aaa:11aa bits 2.2 2.0 * 1.8 **** ** 1.5 **** ** Relative 1.3 **** ** Entropy 1.1 **** *** (13.1 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTCACTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr14:65565481-65565561 59 2.34e-05 GCCAAATCAG TTTCACTT TCTGTTAGAG chr12:64853545-64853625 65 2.34e-05 CCCTTATGAG TTTCACTT TCTATTTC chrX:119259496-119259576 30 2.34e-05 GGACTGCTGC TTTCACTT TCACTCTTGC chr7:16473379-16473459 32 2.34e-05 ATGGTGTCAC TTTCACTT TTGCCATTGC chr19:49977426-49977506 48 2.34e-05 AAAAATTTCC TTTCACTT TCGGTCTCTG chr12:83550799-83550879 21 2.34e-05 ggattgttac tttcactt tcagtaaggc chr6:18054021-18054101 54 2.34e-05 TGAGCTCCAC TTTCACTT TTAAGGGAAC chr2:152146417-152146497 27 2.34e-05 AAAAAACTAA TTTCACTT TCGATTTTTA chr6:14075592-14075672 33 2.34e-05 ATGGTTTCAT TTTCACTT AGGAAGAACT chr20:388898-388978 47 2.34e-05 GGGCCGCCAC TTTCACTT TCTCTTCCGC chr12:24948807-24948887 32 2.34e-05 atttttctag tttcactt tcacttgtgt chr12:127568013-12756809 31 2.34e-05 TGCATTTTAG TTTCACTT tctatttagc chr4:159870392-159870472 58 2.34e-05 tagctttctc tttcactt tcaaaagtgt chr17:48498917-48498997 26 2.34e-05 AGTTCCTTAT TTTCACTT TCAGTTTGAG chr10:91152238-91152318 26 2.34e-05 CTAGCTTTAG TTTCACTT TCCCCTTTCG chr1:199901285-199901365 56 2.34e-05 ctgctttcac tttcactt cttctgccac chr18:53144906-53144986 36 2.34e-05 CTTCCCTTAC TTTCACTT TCAGGTTCTA chr12:34279270-34279350 29 2.34e-05 tgcggtgcac tttcactt ttacttttac chr21:17170040-17170120 44 2.34e-05 ttatctttgg tttcactt tctgctgttt chr3:36949596-36949676 27 2.34e-05 GTCCTCTATG TTTCACTT TCTATTTCCC chr6:26440584-26440664 45 2.34e-05 TTCAATGTAC TTTCACTT TTCATTTCAA chr11:39392902-39392982 39 2.34e-05 gaagctttac tttcactt tcgttttact chr11:5646099-5646179 42 2.34e-05 GCCCCAAAAA TTTCACTT TCATTTCTCA chr14:77428456-77428536 42 2.34e-05 TCAGCTTTAC TTTCACTT TCTAGTCACT chr6:163881740-163881820 51 2.34e-05 TGTACACTAC TTTCACTT TCATTCTTCT chr10:75677038-75677118 33 2.34e-05 ACTGTCTCAG TTTCACTT TCACATAGAT chr14:55799474-55799554 27 2.34e-05 CTTCAGCAAG TTTCACTT TCTAAACTTT chr10:91092182-91092262 53 2.34e-05 GTTCCATCAG TTTCACTT TCCTTTCCCC chr10:91061688-91061768 7 2.34e-05 TGCCAA TTTCACTT TCTAGTTTCA chr16:68798973-68799053 47 2.34e-05 GCAGCTGCAG TTTCACTT TTAGGTTGGG chr12:14369452-14369532 68 2.34e-05 gaagccttac tttcactt tcact chr2:44308638-44308718 45 2.34e-05 tgcatttgac tttcactt tccctttctt chr1:242108276-242108356 27 2.34e-05 cgatttctac tttCACTT TCACATACTT chr21:36901616-36901696 37 2.34e-05 CTCCTTTCAC TTTCACTT CGAATTGATT chr7:121081320-121081400 48 2.34e-05 GTATTCTTAC TTTCACTT TCTCTTTTTT chr8:119933299-119933379 67 2.34e-05 GCCTCTTCAC TTTCACTT TCACTT chr16:11406624-11406704 50 2.34e-05 CTTTCTCTGG TTTCACTT TCAGTTTCTT chr2:85812952-85813032 30 2.34e-05 tccttcttcc tttcactt ttcttttctt chr11:4414872-4414952 28 2.34e-05 CAGCTCCCTA TTTCACTT TCAGTTTCCG chr9:96263669-96263749 60 2.34e-05 CAGAATTTAG TTTCACTT TCATTTTCAC chr1:145097857-145097937 60 2.34e-05 ATATAGTTAC TTTCACTT TTAGGAGAGT chr5:64778708-64778788 26 2.34e-05 AATGTAGCAC TTTCACTT TCATTTGCTG chr3:128523206-128523286 53 2.34e-05 GCTAATACAC TTTCACTT TCTCTTTGCT chr1:36103098-36103178 42 2.34e-05 TCACTTTCAC TTTCACTT TTCATTTTTC chr18:74921000-74921080 27 2.34e-05 taccttccag tttcactt tctctttcct chr22:36552965-36553045 35 2.34e-05 CCAGCTTCAG TTTCACTT TCAGTTGAGG chr12:50665837-50665917 41 2.34e-05 GGCTTCTTAG TTTCACTT CTGGACATTT chr9:102972435-102972515 47 2.34e-05 TTGCATATGG TTTCACTT TCTATTACGG chr22:36649079-36649159 41 2.34e-05 AAGTTGTGAC TTTCACTT TCCCTTTCGA chr7:6145726-6145806 41 2.34e-05 TTAGGGTCAG TTTCACTT TCTCTTCTGT chr8:123931374-123931454 47 2.34e-05 CCAGTTCTTC TTTCACTT TCATTTTGCA chr9:80747718-80747798 61 2.34e-05 CAGTTAGCAC TTTCACTT TCATTTTTCT chr15:68406837-68406917 56 2.34e-05 GGAACTTTAG TTTCACTT TCCCTAAGAC chr7:17182256-17182336 32 2.34e-05 AGAAGTGTGT TTTCACTT TCACTTTCAC chr4:123745829-123745909 62 2.34e-05 agagggttac tttcactt tccccagatc chr15:59274178-59274258 54 2.34e-05 gaatggcagc tttcactt tcatttttct chr3:121151145-121151225 54 2.34e-05 CTATTTTCAC TTTCACTT TCAATTTCAC chr1:118277819-118277899 34 2.34e-05 AGCATTCCTC TTTCACTT TCATTTTGTG chr7:26196073-26196153 26 2.34e-05 ACTGTTTTGG TTTCACTT CTTACTGGGG chr6:33281833-33281913 33 2.34e-05 CTCCTTTCAC TTTCACTT TCCTCCAAAG chr1:222182602-222182682 29 2.34e-05 ATTAAAATGG TTTCACTT TTGCTCACGG chr8:10488029-10488109 32 2.34e-05 AGGGTTTCAC TTTCACTT TCTGTTTCCC chr20:3913502-3913582 47 2.34e-05 ATAAAGACAC TTTCACTT TCAGTTTCGG chr20:47717642-47717722 29 2.34e-05 TGGGTTCTGC TTTCACTT TCACATTGTT chr11:102183606-10218368 39 2.34e-05 CCCTGTAAGA TTTCACTT TCACTTTCAG chr1:65534324-65534404 41 2.34e-05 CTTCAGGCAC TTTCACTT TTGTTTTTCG chr3:193550051-193550131 55 2.34e-05 aacttcccag tttcactt tcactgagag chr1:179098935-179099015 57 2.34e-05 GCACTTTTAC TTTCACTT TTAATTCTGT chr16:18957425-18957505 27 2.34e-05 TCAGGCTTGG TTTCACTT TCTAAATTGC chr13:31147035-31147115 52 2.34e-05 GGGCTGACAG TTTCACTT TCAGTTTTCA chr11:128701171-12870125 42 2.34e-05 ACCAGGTCAG TTTCACTT TTGCGATCTG chr2:102872861-102872941 33 2.34e-05 TTACTTTCAC TTTCACTT CTCCCTCCTG chr3:4397213-4397293 70 2.34e-05 CTGTTAGTGG TTTCACTT TTC chr3:88081039-88081119 64 2.34e-05 TTGCAATTAG TTTCACTT TCAGTTTCT chr21:15975064-15975144 49 2.34e-05 GGCCGTTTCC TTTCACTT TCACTCCTAT chr5:179263877-179263957 38 2.34e-05 GCCTAATGGC TTTCACTT TCTCTTTTGT chr14:77420103-77420183 49 2.34e-05 ACCGGGCCAC TTTCACTT TCTCTTTTCT chr6:32806533-32806613 38 4.17e-05 CAGCTTTCGC TTTCGCTT CCCCAGCCAA chr2:20100011-20100091 12 4.17e-05 ACATGAATAG TTTCGCTT TCTATGTTTA chr22:18632785-18632865 42 4.17e-05 CCGCTGTAAG TTTCGCTT TCCATTCAGT chr10:6019530-6019610 35 4.17e-05 TCGCATTCGC TTTCGCTT TTGCTTTGGC chr10:115439588-11543966 59 4.17e-05 AGACTTTTAG TTTCGCTT TCGCTAAAGG chr20:61436142-61436222 29 4.17e-05 ctgctttcgg tttcgctt ccgcctccag chr6:119788761-119788841 58 4.17e-05 GGTTTACTAC TTTCGCTT TCAGTTCTTT chr14:24605368-24605448 40 4.17e-05 GCCCTACCGC TTTCGCTT TCCCTTCGCG chr2:220252323-220252403 45 4.17e-05 GGGCTTTCGG TTTCGCTT TGGGTCAGGC chr6:32822319-32822399 30 4.17e-05 TCTAAAGCGC TTTCGCTT TCACTCTGGT chr16:67970739-67970819 26 4.17e-05 TACTTCCTGC TTTCGCTT TCGCCTTTAC chr16:11334726-11334806 48 6.36e-05 CGGCTTTTAC TTTCAGTT TTCTGGAGCT chr5:36419810-36419890 68 6.36e-05 caGATCTGGG TTTCAGTT TCATC chr8:73020421-73020501 66 6.36e-05 ACACTCTTAC TTTCAGTT TTGTTTG chr17:26135171-26135251 32 6.36e-05 ttacttttgg tttcagtt tgcttatctg chr6:26365278-26365358 49 6.36e-05 TTCAATGTAC TTTCAGTT TTCATTTCAA chr6:26402346-26402426 48 6.36e-05 TTCAATGTAC TTTCAGTT TTCATTTCAG chr5:176727400-176727480 56 6.36e-05 GAGTGGCTGG TTTCAGTT TCAGTCTCCC chr2:9971045-9971125 70 6.36e-05 GTGGTTTCAG TTTCAGTT ATG chr7:92747357-92747437 62 6.36e-05 ATAGGTTTGG TTTCAGTT TCATTTCTCA chr6:25139152-25139232 32 6.36e-05 TTTGTGGCAC TTTCAGTT TCATTTTTAG chr1:46528409-46528489 68 6.36e-05 tcggtttcgg tttcagtt ttggt chr7:142956039-142956119 63 9.13e-05 aacttaggag tttcattt ttataacaga chr4:77903888-77903968 36 9.13e-05 TGCAGTTTAC TTTCATTT TTGGAAGGCT chr6:169252007-169252087 45 9.13e-05 GCCAGATAAA TTTCATTT GCACAAAGCA chr1:27998782-27998862 68 9.13e-05 CTCTGCAGAG TTTCATTT TCCCC chr10:44090790-44090870 52 9.13e-05 ctgctcttac tttcattt ttggctcagc chr11:5255920-5256000 47 9.13e-05 ATCCTCCTAG TTTCATTT TTGCAGAAGT chr21:37632933-37633013 30 9.13e-05 TTGGTTTTAC TTTCATTT TCAGAAATCG chr4:89300498-89300578 66 1.32e-04 CTCGGATTTG TTTCGGTT TCCAATT chr17:46662924-46663004 53 1.32e-04 ACCCGTGCGC TTTCGGTT TCCCTTCCGC chr6:146070895-146070975 47 1.32e-04 ACTCAGCTAT TTTCTCTT TTGCCTTCTA chr4:169401661-169401741 23 1.32e-04 AGGGAGTTAG TTTCGGTT TCTTTTCTCC chr2:20776557-20776637 54 1.32e-04 TCTGTTTCTG TTTCGGTT ACGTATAGAA chr9:101899698-101899778 51 1.32e-04 GACAGCTTAC TTTCTCTT TTCACTGCTT chr1:169278942-169279022 24 1.32e-04 tgatactcac tttcggtt ttgtatatgg chr17:57237706-57237786 45 1.32e-04 GGTTGGTTGG TTTCGGTT TTGGTTTGGG chr15:45004824-45004904 68 1.32e-04 TGCCTCTTAC TTTCGGTT TTGAA chr3:183259651-183259731 52 1.32e-04 CCACTTTCTC TTTCTCTT TCCAATCTTG chr11:14522054-14522134 43 1.32e-04 GCCATAGTAC TTTCGGTT TTGCCCATTT chr12:108496288-10849636 59 1.32e-04 acacttctac tttctctt ttgaaatctt chr15:50540102-50540182 42 1.32e-04 TTACTTTCTC TTTCTCTT TCCTGCAAAC chr17:46386087-46386167 20 1.54e-04 tttgggcaag tttcgttt tccttatctg chr7:100144515-100144595 28 1.54e-04 AAAGCCTTGC TTTCGTTT TTCCCTGAGC chr6:27568801-27568881 31 1.54e-04 ttcagtgtac tttcgttt ttgcaataaa chr12:68856780-68856860 48 1.54e-04 acacttttac tttcgttt tagctattac chr7:120640143-120640223 61 1.54e-04 AATGTTTTGG TTTCGTTT TCCCCCTTGG chr8:103299707-103299787 41 1.75e-04 TCACTATCAC TTTCTGTT TCAGCTGCTG chr17:46590668-46590748 70 2.03e-04 CTCATGAGGC TTTAACTT GGT chr4:15655184-15655264 59 2.23e-04 TAGTCTTCAC TTCCACTT TCGATTTTTG chr13:28029633-28029713 32 2.50e-04 GCTCTTAGTT TTTCTTTT TTTTTTTTTT chr20:52271654-52271734 6 2.78e-04 CAGGG TTTTACTT CCTTAATTAC chr1:23445890-23445970 42 3.00e-04 agatcttagt tttagctt taaaaataac -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:65565481-65565561 2.3e-05 58_[+1]_14 chr12:64853545-64853625 2.3e-05 64_[+1]_8 chrX:119259496-119259576 2.3e-05 29_[+1]_43 chr7:16473379-16473459 2.3e-05 31_[+1]_41 chr19:49977426-49977506 2.3e-05 47_[+1]_25 chr12:83550799-83550879 2.3e-05 20_[+1]_52 chr6:18054021-18054101 2.3e-05 53_[+1]_19 chr2:152146417-152146497 2.3e-05 26_[+1]_46 chr6:14075592-14075672 2.3e-05 32_[+1]_40 chr20:388898-388978 2.3e-05 46_[+1]_26 chr12:24948807-24948887 2.3e-05 31_[+1]_41 chr12:127568013-12756809 2.3e-05 30_[+1]_42 chr4:159870392-159870472 2.3e-05 57_[+1]_15 chr17:48498917-48498997 2.3e-05 25_[+1]_47 chr10:91152238-91152318 2.3e-05 25_[+1]_47 chr1:199901285-199901365 2.3e-05 55_[+1]_17 chr18:53144906-53144986 2.3e-05 35_[+1]_37 chr12:34279270-34279350 2.3e-05 28_[+1]_44 chr21:17170040-17170120 2.3e-05 43_[+1]_29 chr3:36949596-36949676 2.3e-05 26_[+1]_46 chr6:26440584-26440664 2.3e-05 44_[+1]_28 chr11:39392902-39392982 2.3e-05 38_[+1]_34 chr11:5646099-5646179 2.3e-05 41_[+1]_31 chr14:77428456-77428536 2.3e-05 41_[+1]_31 chr6:163881740-163881820 2.3e-05 50_[+1]_22 chr10:75677038-75677118 2.3e-05 32_[+1]_40 chr14:55799474-55799554 2.3e-05 26_[+1]_46 chr10:91092182-91092262 2.3e-05 52_[+1]_20 chr10:91061688-91061768 2.3e-05 6_[+1]_66 chr16:68798973-68799053 2.3e-05 46_[+1]_26 chr12:14369452-14369532 2.3e-05 67_[+1]_5 chr2:44308638-44308718 2.3e-05 44_[+1]_28 chr1:242108276-242108356 2.3e-05 26_[+1]_46 chr21:36901616-36901696 2.3e-05 36_[+1]_36 chr7:121081320-121081400 2.3e-05 47_[+1]_25 chr8:119933299-119933379 2.3e-05 66_[+1]_6 chr16:11406624-11406704 2.3e-05 49_[+1]_23 chr2:85812952-85813032 2.3e-05 29_[+1]_43 chr11:4414872-4414952 2.3e-05 27_[+1]_45 chr9:96263669-96263749 2.3e-05 59_[+1]_13 chr1:145097857-145097937 2.3e-05 59_[+1]_13 chr5:64778708-64778788 2.3e-05 25_[+1]_47 chr3:128523206-128523286 2.3e-05 52_[+1]_20 chr1:36103098-36103178 2.3e-05 41_[+1]_31 chr18:74921000-74921080 2.3e-05 26_[+1]_46 chr22:36552965-36553045 2.3e-05 34_[+1]_38 chr12:50665837-50665917 2.3e-05 40_[+1]_32 chr9:102972435-102972515 2.3e-05 46_[+1]_26 chr22:36649079-36649159 2.3e-05 40_[+1]_32 chr7:6145726-6145806 2.3e-05 40_[+1]_32 chr8:123931374-123931454 2.3e-05 46_[+1]_26 chr9:80747718-80747798 2.3e-05 60_[+1]_12 chr15:68406837-68406917 2.3e-05 55_[+1]_17 chr7:17182256-17182336 2.3e-05 31_[+1]_41 chr4:123745829-123745909 2.3e-05 61_[+1]_11 chr15:59274178-59274258 2.3e-05 53_[+1]_19 chr3:121151145-121151225 2.3e-05 53_[+1]_19 chr1:118277819-118277899 2.3e-05 33_[+1]_39 chr7:26196073-26196153 2.3e-05 25_[+1]_47 chr6:33281833-33281913 2.3e-05 32_[+1]_40 chr1:222182602-222182682 2.3e-05 28_[+1]_44 chr8:10488029-10488109 2.3e-05 31_[+1]_41 chr20:3913502-3913582 2.3e-05 46_[+1]_26 chr20:47717642-47717722 2.3e-05 28_[+1]_44 chr11:102183606-10218368 2.3e-05 38_[+1]_34 chr1:65534324-65534404 2.3e-05 40_[+1]_32 chr3:193550051-193550131 2.3e-05 54_[+1]_18 chr1:179098935-179099015 2.3e-05 56_[+1]_16 chr16:18957425-18957505 2.3e-05 26_[+1]_46 chr13:31147035-31147115 2.3e-05 51_[+1]_21 chr11:128701171-12870125 2.3e-05 41_[+1]_31 chr2:102872861-102872941 2.3e-05 32_[+1]_40 chr3:4397213-4397293 2.3e-05 69_[+1]_3 chr3:88081039-88081119 2.3e-05 63_[+1]_9 chr21:15975064-15975144 2.3e-05 48_[+1]_24 chr5:179263877-179263957 2.3e-05 37_[+1]_35 chr14:77420103-77420183 2.3e-05 48_[+1]_24 chr6:32806533-32806613 4.2e-05 37_[+1]_35 chr2:20100011-20100091 4.2e-05 11_[+1]_61 chr22:18632785-18632865 4.2e-05 41_[+1]_31 chr10:6019530-6019610 4.2e-05 34_[+1]_38 chr10:115439588-11543966 4.2e-05 58_[+1]_14 chr20:61436142-61436222 4.2e-05 28_[+1]_44 chr6:119788761-119788841 4.2e-05 57_[+1]_15 chr14:24605368-24605448 4.2e-05 39_[+1]_33 chr2:220252323-220252403 4.2e-05 44_[+1]_28 chr6:32822319-32822399 4.2e-05 29_[+1]_43 chr16:67970739-67970819 4.2e-05 25_[+1]_47 chr16:11334726-11334806 6.4e-05 47_[+1]_25 chr5:36419810-36419890 6.4e-05 67_[+1]_5 chr8:73020421-73020501 6.4e-05 65_[+1]_7 chr17:26135171-26135251 6.4e-05 31_[+1]_41 chr6:26365278-26365358 6.4e-05 48_[+1]_24 chr6:26402346-26402426 6.4e-05 47_[+1]_25 chr5:176727400-176727480 6.4e-05 55_[+1]_17 chr2:9971045-9971125 6.4e-05 69_[+1]_3 chr7:92747357-92747437 6.4e-05 61_[+1]_11 chr6:25139152-25139232 6.4e-05 31_[+1]_41 chr1:46528409-46528489 6.4e-05 67_[+1]_5 chr7:142956039-142956119 9.1e-05 62_[+1]_10 chr4:77903888-77903968 9.1e-05 35_[+1]_37 chr6:169252007-169252087 9.1e-05 44_[+1]_28 chr1:27998782-27998862 9.1e-05 67_[+1]_5 chr10:44090790-44090870 9.1e-05 51_[+1]_21 chr11:5255920-5256000 9.1e-05 46_[+1]_26 chr21:37632933-37633013 9.1e-05 29_[+1]_43 chr4:89300498-89300578 0.00013 65_[+1]_7 chr17:46662924-46663004 0.00013 52_[+1]_20 chr6:146070895-146070975 0.00013 46_[+1]_26 chr4:169401661-169401741 0.00013 22_[+1]_50 chr2:20776557-20776637 0.00013 53_[+1]_19 chr9:101899698-101899778 0.00013 50_[+1]_22 chr1:169278942-169279022 0.00013 23_[+1]_49 chr17:57237706-57237786 0.00013 44_[+1]_28 chr15:45004824-45004904 0.00013 67_[+1]_5 chr3:183259651-183259731 0.00013 51_[+1]_21 chr11:14522054-14522134 0.00013 42_[+1]_30 chr12:108496288-10849636 0.00013 58_[+1]_14 chr15:50540102-50540182 0.00013 41_[+1]_31 chr17:46386087-46386167 0.00015 19_[+1]_53 chr7:100144515-100144595 0.00015 27_[+1]_45 chr6:27568801-27568881 0.00015 30_[+1]_42 chr12:68856780-68856860 0.00015 47_[+1]_25 chr7:120640143-120640223 0.00015 60_[+1]_12 chr8:103299707-103299787 0.00018 40_[+1]_32 chr17:46590668-46590748 0.0002 69_[+1]_3 chr4:15655184-15655264 0.00022 58_[+1]_14 chr13:28029633-28029713 0.00025 31_[+1]_41 chr20:52271654-52271734 0.00028 5_[+1]_67 chr1:23445890-23445970 0.0003 41_[+1]_31 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTCACTT width=8 seqs=130 chr14:65565481-65565561 ( 59) TTTCACTT 1 chr12:64853545-64853625 ( 65) TTTCACTT 1 chrX:119259496-119259576 ( 30) TTTCACTT 1 chr7:16473379-16473459 ( 32) TTTCACTT 1 chr19:49977426-49977506 ( 48) TTTCACTT 1 chr12:83550799-83550879 ( 21) TTTCACTT 1 chr6:18054021-18054101 ( 54) TTTCACTT 1 chr2:152146417-152146497 ( 27) TTTCACTT 1 chr6:14075592-14075672 ( 33) TTTCACTT 1 chr20:388898-388978 ( 47) TTTCACTT 1 chr12:24948807-24948887 ( 32) TTTCACTT 1 chr12:127568013-12756809 ( 31) TTTCACTT 1 chr4:159870392-159870472 ( 58) TTTCACTT 1 chr17:48498917-48498997 ( 26) TTTCACTT 1 chr10:91152238-91152318 ( 26) TTTCACTT 1 chr1:199901285-199901365 ( 56) TTTCACTT 1 chr18:53144906-53144986 ( 36) TTTCACTT 1 chr12:34279270-34279350 ( 29) TTTCACTT 1 chr21:17170040-17170120 ( 44) TTTCACTT 1 chr3:36949596-36949676 ( 27) TTTCACTT 1 chr6:26440584-26440664 ( 45) TTTCACTT 1 chr11:39392902-39392982 ( 39) TTTCACTT 1 chr11:5646099-5646179 ( 42) TTTCACTT 1 chr14:77428456-77428536 ( 42) TTTCACTT 1 chr6:163881740-163881820 ( 51) TTTCACTT 1 chr10:75677038-75677118 ( 33) TTTCACTT 1 chr14:55799474-55799554 ( 27) TTTCACTT 1 chr10:91092182-91092262 ( 53) TTTCACTT 1 chr10:91061688-91061768 ( 7) TTTCACTT 1 chr16:68798973-68799053 ( 47) TTTCACTT 1 chr12:14369452-14369532 ( 68) TTTCACTT 1 chr2:44308638-44308718 ( 45) TTTCACTT 1 chr1:242108276-242108356 ( 27) TTTCACTT 1 chr21:36901616-36901696 ( 37) TTTCACTT 1 chr7:121081320-121081400 ( 48) TTTCACTT 1 chr8:119933299-119933379 ( 67) TTTCACTT 1 chr16:11406624-11406704 ( 50) TTTCACTT 1 chr2:85812952-85813032 ( 30) TTTCACTT 1 chr11:4414872-4414952 ( 28) TTTCACTT 1 chr9:96263669-96263749 ( 60) TTTCACTT 1 chr1:145097857-145097937 ( 60) TTTCACTT 1 chr5:64778708-64778788 ( 26) TTTCACTT 1 chr3:128523206-128523286 ( 53) TTTCACTT 1 chr1:36103098-36103178 ( 42) TTTCACTT 1 chr18:74921000-74921080 ( 27) TTTCACTT 1 chr22:36552965-36553045 ( 35) TTTCACTT 1 chr12:50665837-50665917 ( 41) TTTCACTT 1 chr9:102972435-102972515 ( 47) TTTCACTT 1 chr22:36649079-36649159 ( 41) TTTCACTT 1 chr7:6145726-6145806 ( 41) TTTCACTT 1 chr8:123931374-123931454 ( 47) TTTCACTT 1 chr9:80747718-80747798 ( 61) TTTCACTT 1 chr15:68406837-68406917 ( 56) TTTCACTT 1 chr7:17182256-17182336 ( 32) TTTCACTT 1 chr4:123745829-123745909 ( 62) TTTCACTT 1 chr15:59274178-59274258 ( 54) TTTCACTT 1 chr3:121151145-121151225 ( 54) TTTCACTT 1 chr1:118277819-118277899 ( 34) TTTCACTT 1 chr7:26196073-26196153 ( 26) TTTCACTT 1 chr6:33281833-33281913 ( 33) TTTCACTT 1 chr1:222182602-222182682 ( 29) TTTCACTT 1 chr8:10488029-10488109 ( 32) TTTCACTT 1 chr20:3913502-3913582 ( 47) TTTCACTT 1 chr20:47717642-47717722 ( 29) TTTCACTT 1 chr11:102183606-10218368 ( 39) TTTCACTT 1 chr1:65534324-65534404 ( 41) TTTCACTT 1 chr3:193550051-193550131 ( 55) TTTCACTT 1 chr1:179098935-179099015 ( 57) TTTCACTT 1 chr16:18957425-18957505 ( 27) TTTCACTT 1 chr13:31147035-31147115 ( 52) TTTCACTT 1 chr11:128701171-12870125 ( 42) TTTCACTT 1 chr2:102872861-102872941 ( 33) TTTCACTT 1 chr3:4397213-4397293 ( 70) TTTCACTT 1 chr3:88081039-88081119 ( 64) TTTCACTT 1 chr21:15975064-15975144 ( 49) TTTCACTT 1 chr5:179263877-179263957 ( 38) TTTCACTT 1 chr14:77420103-77420183 ( 49) TTTCACTT 1 chr6:32806533-32806613 ( 38) TTTCGCTT 1 chr2:20100011-20100091 ( 12) TTTCGCTT 1 chr22:18632785-18632865 ( 42) TTTCGCTT 1 chr10:6019530-6019610 ( 35) TTTCGCTT 1 chr10:115439588-11543966 ( 59) TTTCGCTT 1 chr20:61436142-61436222 ( 29) TTTCGCTT 1 chr6:119788761-119788841 ( 58) TTTCGCTT 1 chr14:24605368-24605448 ( 40) TTTCGCTT 1 chr2:220252323-220252403 ( 45) TTTCGCTT 1 chr6:32822319-32822399 ( 30) TTTCGCTT 1 chr16:67970739-67970819 ( 26) TTTCGCTT 1 chr16:11334726-11334806 ( 48) TTTCAGTT 1 chr5:36419810-36419890 ( 68) TTTCAGTT 1 chr8:73020421-73020501 ( 66) TTTCAGTT 1 chr17:26135171-26135251 ( 32) TTTCAGTT 1 chr6:26365278-26365358 ( 49) TTTCAGTT 1 chr6:26402346-26402426 ( 48) TTTCAGTT 1 chr5:176727400-176727480 ( 56) TTTCAGTT 1 chr2:9971045-9971125 ( 70) TTTCAGTT 1 chr7:92747357-92747437 ( 62) TTTCAGTT 1 chr6:25139152-25139232 ( 32) TTTCAGTT 1 chr1:46528409-46528489 ( 68) TTTCAGTT 1 chr7:142956039-142956119 ( 63) TTTCATTT 1 chr4:77903888-77903968 ( 36) TTTCATTT 1 chr6:169252007-169252087 ( 45) TTTCATTT 1 chr1:27998782-27998862 ( 68) TTTCATTT 1 chr10:44090790-44090870 ( 52) TTTCATTT 1 chr11:5255920-5256000 ( 47) TTTCATTT 1 chr21:37632933-37633013 ( 30) TTTCATTT 1 chr4:89300498-89300578 ( 66) TTTCGGTT 1 chr17:46662924-46663004 ( 53) TTTCGGTT 1 chr6:146070895-146070975 ( 47) TTTCTCTT 1 chr4:169401661-169401741 ( 23) TTTCGGTT 1 chr2:20776557-20776637 ( 54) TTTCGGTT 1 chr9:101899698-101899778 ( 51) TTTCTCTT 1 chr1:169278942-169279022 ( 24) TTTCGGTT 1 chr17:57237706-57237786 ( 45) TTTCGGTT 1 chr15:45004824-45004904 ( 68) TTTCGGTT 1 chr3:183259651-183259731 ( 52) TTTCTCTT 1 chr11:14522054-14522134 ( 43) TTTCGGTT 1 chr12:108496288-10849636 ( 59) TTTCTCTT 1 chr15:50540102-50540182 ( 42) TTTCTCTT 1 chr17:46386087-46386167 ( 20) TTTCGTTT 1 chr7:100144515-100144595 ( 28) TTTCGTTT 1 chr6:27568801-27568881 ( 31) TTTCGTTT 1 chr12:68856780-68856860 ( 48) TTTCGTTT 1 chr7:120640143-120640223 ( 61) TTTCGTTT 1 chr8:103299707-103299787 ( 41) TTTCTGTT 1 chr17:46590668-46590748 ( 70) TTTAACTT 1 chr4:15655184-15655264 ( 59) TTCCACTT 1 chr13:28029633-28029713 ( 32) TTTCTTTT 1 chr20:52271654-52271734 ( 6) TTTTACTT 1 chr1:23445890-23445970 ( 42) TTTAGCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.14092 E= 1.3e-176 -1367 -1367 -1367 186 -1367 -1367 -1367 186 -1367 -491 -1367 185 -416 207 -1367 -516 145 -1367 -18 -235 -1367 168 -50 -146 -1367 -1367 -1367 186 -1367 -1367 -1367 186 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 130 E= 1.3e-176 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.007692 0.000000 0.992308 0.015385 0.976923 0.000000 0.007692 0.753846 0.000000 0.192308 0.053846 0.000000 0.746154 0.153846 0.100000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCACTT MEME-1 regular expression -------------------------------------------------------------------------------- TTTCACTT -------------------------------------------------------------------------------- Time 4.98 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAGTGAA MEME-2 width = 8 sites = 113 llr = 1039 E-value = 7.2e-146 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A aaa1::9a pos.-specific C :::21::: probability G :::7:a1: matrix T ::::9::: bits 2.2 * 2.0 * 1.8 *** * * 1.5 *** *** Relative 1.3 *** **** Entropy 1.1 ******** (13.3 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAGTGAA consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:34695835-34695915 45 2.07e-05 AGAAAGAAGG AAAGTGAA AGTAAAGCAG chr2:183954286-183954366 47 2.07e-05 ttgacaggca aaagtgaa agcaggggag chr7:134832737-134832817 35 2.07e-05 TTAGGAAACG AAAGTGAA ATCAGCTGAT chr3:40242404-40242484 33 2.07e-05 agaaaaaacg aaagtgaa acccactgtt chr1:197701551-197701631 38 2.07e-05 TGTCATGGTA AAAGTGAA ACTGGGTAAC chr2:152144792-152144872 26 2.07e-05 aggctactta aaagtgaa agcggaagac chr21:17104796-17104876 40 2.07e-05 AGAAGAAACA AAAGTGAA AGTCTGTTTT chr3:142935715-142935795 19 2.07e-05 CTTCAGAGGG AAAGTGAA ACTGAAGAGT chr4:8539072-8539152 47 2.07e-05 ACTCAATCGA AAAGTGAA AGTGGCAGAG chr17:80293088-80293168 40 2.07e-05 TCATGTTGTG AAAGTGAA ACTAGTTTGT chr3:197575130-197575210 41 2.07e-05 cagtaagatg aaagtgaa agtgctgtgt chr3:196001660-196001740 48 2.07e-05 GTCAGAGTCG AAAGTGAA AGATGAGCAC chr17:56024342-56024422 71 2.07e-05 AGACCAGAGC AAAGTGAA AT chr2:166759584-166759664 3 2.07e-05 AG AAAGTGAA AATGAAAGAG chr11:61783218-61783298 13 2.07e-05 agttaaaacg aaagtgaa aggaagtgct chr1:114402286-114402366 33 2.07e-05 CGTGAACTTA AAAGTGAA ACTTGTGAAT chr22:36635607-36635687 17 2.07e-05 TTCGAAAGGG AAAGTGAA AGTCACAACT chr4:17387216-17387296 21 2.07e-05 cccaaaaacg aaagtgaa agctaggcct chr11:114217490-11421757 9 2.07e-05 ttaaagcg aaagtgaa agtaaagctt chr2:171086395-171086475 37 2.07e-05 ATGGCCCGAG AAAGTGAA AGTACTCTAC chr15:70820701-70820781 40 2.07e-05 taAGAGCTGG AAAGTGAA AGCAAAACAG chr6:169252007-169252087 11 2.07e-05 AAAGAAAATG AAAGTGAA AGTAATCGGA chr1:155607364-155607444 21 2.07e-05 tattaaagca aaagtgaa agtaaagtga chr7:112897361-112897441 37 2.07e-05 atacctttca aaagtgaa agtaagataa chr16:53986496-53986576 28 2.07e-05 TGGGAAACTG AAAGTGAA ACTCTCTAGC chr5:10596040-10596120 33 2.07e-05 TCCCAGGACA AAAGTGAA ACTGCCTTCG chr1:230305614-230305694 45 2.07e-05 TGGAGCAGTG AAAGTGAA ACTGGAAATG chr2:196397883-196397963 58 2.07e-05 CTTGAAAATG AAAGTGAA AAGAGACTGA chr1:228328993-228329073 30 2.07e-05 CCGGGGAAAG AAAGTGAA AATGAAAGCG chr1:212112177-212112257 38 2.07e-05 ACTGAAAAGC AAAGTGAA AGTGAAAAGC chr4:82668454-82668534 16 2.07e-05 TTGCTAAGTG AAAGTGAA ACACTGTTTC chr7:12297391-12297471 4 2.07e-05 ctg aaagtgaa actaatcaga chr12:10517693-10517773 9 2.07e-05 caaaagtg aaagtgaa agtcagctgc chr9:110008700-110008780 9 2.07e-05 TGAAAGTG AAAGTGAA AGTGACTGTG chr17:43304602-43304682 13 2.07e-05 GCTCAAACTG AAAGTGAA ACCCTAGGGT chr11:20382355-20382435 47 2.07e-05 agggaaaggg aaagtgaa aggaaagaag chrX:154862259-154862339 38 2.07e-05 tccaaaagag aaagtgaa agtgtacaag chr8:145060603-145060683 21 2.07e-05 CAGGAAAACA AAAGTGAA ACTGAAAGAC chr19:47217866-47217946 8 2.07e-05 AGAACAG AAAGTGAA ACTGCCCCGG chr6:74364695-74364775 14 2.07e-05 GCGGACTCTG AAAGTGAA ACTAGGAAAA chr10:120891280-12089136 41 2.07e-05 TTGCAAAGCG AAAGTGAA AGAAAACTGG chr1:248070099-248070179 22 2.07e-05 attgcaaatg aaagtgaa actggttttt chr4:185338477-185338557 9 2.07e-05 aaCTAGTA AAAGTGAA ACTGAAAGCA chr13:28029633-28029713 13 2.07e-05 TACCAAAGTG AAAGTGAA AGCTCTTAGT chrX:40504144-40504224 11 2.07e-05 atcaagaatg aaagtgaa accagtcagt chr1:89594641-89594721 37 2.07e-05 GGTGACAATG AAAGTGAA AGTAGAGCAG chr10:44118963-44119043 14 2.07e-05 tgagagagag aaagtgaa agtgaaagta chr13:44848627-44848707 48 2.07e-05 agggaaacag aaagtgaa agcagaggca chr12:13180104-13180184 30 2.07e-05 AAAGGAGTCA AAAGTGAA AGTTCCCCTG chr5:96212162-96212242 13 2.07e-05 CTTAGAACAG AAAGTGAA AGCAAAAGTA chr5:81074975-81075055 28 2.07e-05 TAATTAAAAG AAAGTGAA ACTAAAAACA chr1:33427987-33428067 31 2.07e-05 TTATTAACTG AAAGTGAA AGTGAGCCAC chr20:5059260-5059340 21 2.07e-05 tggcagaggg aaagtgaa actggcggtt chr8:29356980-29357060 39 2.07e-05 GCTGAAAGGG AAAGTGAA AGCGGCAACA chr3:62431140-62431220 45 2.07e-05 AATGAAAGTG AAAGTGAA GTGGGTTTAC chr2:149310716-149310796 9 2.07e-05 atgaactg aaagtgaa agcagcctgc chr8:20875361-20875441 23 2.07e-05 tctgtcccag aaagtgaa agtaaataat chr17:46590668-46590748 41 2.07e-05 GGGAGAGGTG AAAGTGAA AGTGCAGGAG chr11:63304230-63304310 35 2.07e-05 AAGGAAAGTG AAAGTGAA ATTCTCTCCT chr1:23445890-23445970 7 2.07e-05 TAACTG AAAGTGAA AGCAAGTATG chr10:90734877-90734957 5 2.07e-05 AGTG AAAGTGAA ACCAGAATGC chr19:42553346-42553426 25 2.07e-05 gctgggaatg aaagtgaa agtggttcaa chr12:68630492-68630572 45 2.07e-05 CACCAAAGAG AAAGTGAA AGTACACAGC chr1:161014752-161014832 28 2.07e-05 AAAGGAACTG AAAGTGAA ACCGTACAGA chr2:64994286-64994366 19 2.07e-05 TGGAGTTTAG AAAGTGAA ACTGACTAGA chr17:33868218-33868298 44 2.07e-05 CGAACAAGCA AAAGTGAA AGCAACTGCA chr5:138720912-138720992 37 4.29e-05 CTCACAAACG AAACTGAA AGTTCTGGTG chr7:142956039-142956119 41 4.29e-05 gtatgtaaac aaactgaa acttaactta chr14:91580936-91581016 38 4.29e-05 AAAGAAAGTA AAACTGAA ACTGCCTTTG chr7:150104150-150104230 59 4.29e-05 GCTGAAACTG AAACTGAA AATCCTAACT chr21:42792472-42792552 31 4.29e-05 AATGAAACCG AAACTGAA TTGTCCGGGA chr22:30443456-30443536 5 4.29e-05 actg aaactgaa actatagtcc chrX:41190937-41191017 22 4.29e-05 TAGGAAAACG AAACTGAA ACAAAACCGA chr6:27088839-27088919 7 4.29e-05 atcagg aaactgaa aatgaaagca chr6:34625298-34625378 24 4.29e-05 TTTAAACCCC AAACTGAA ACTGAAAGCA chr3:122283138-122283218 42 4.29e-05 CAGGGAAGCG AAACTGAA ACTTTGCGCC chr10:3871221-3871301 15 4.29e-05 ATCAGAATCG AAACTGAA ACTAAGAAAA chr2:191888232-191888312 12 4.29e-05 gccatcaaag aaactgaa agtagttcag chr6:133134269-133134349 57 4.29e-05 CTCTATCAGT AAACTGAA CTCTATCAGT chr8:90742285-90742365 34 4.29e-05 AGTAAAACCG AAACTGAA GCACTCTACT chr11:46582380-46582460 41 4.29e-05 CCAGAAACGG AAACTGAA ACCAGCTGCC chr22:36044382-36044462 24 4.29e-05 GGCAAAAAGG AAACTGAA AGTGACAGCT chr8:124049940-124050020 32 4.29e-05 AACGAAATAG AAACTGAA ACTGAAGCTG chr17:80377532-80377612 18 4.29e-05 ATCAGAACTG AAACTGAA AGTATAAGGA chr17:1992951-1993031 26 4.29e-05 GCAGAAAGGA AAACTGAA AGTGAGATGT chr1:78224860-78224940 50 6.04e-05 ACAGCGCCGA AAAGCGAA ACCAGAACCC chr8:71126851-71126931 18 6.04e-05 GCTAGAAACA AAAGCGAA ACTGACCCAG chr6:32811793-32811873 27 6.04e-05 GGAGGAAGTG AAAGCGAA AGCCACAGAT chr3:122399632-122399712 26 6.04e-05 CCAGGAAACG AAAGCGAA AGAGTCAAAG chr19:10196906-10196986 45 6.04e-05 CCCTGAATCG AAAGCGAA ACAGGGGCCG chr12:42492028-42492108 42 6.04e-05 GTCACGAAAG AAAGCGAA AGTAACTgtg chr5:98369220-98369300 4 8.68e-05 TTG AAAATGAA AGCAAAAGTA chr1:59485972-59486052 18 8.68e-05 TCCAGACTAG AAAATGAA ACCAAAACCA chr11:57333761-57333841 30 8.68e-05 AGAGGAACAG AAAATGAA AGTAGAAAGG chr4:15655184-15655264 21 1.03e-04 TCCACAGTCT AAAGTGGA GAGAAAACCT chr7:107661128-107661208 9 1.03e-04 tgaaacca aaagtgga aatgcatgat chr14:58711924-58712004 36 1.03e-04 AGGGAAACCG AAAGTGGA AACTCGTGGG chr17:41158755-41158835 36 1.03e-04 CACGGAAATG AAAGTGGA AGCAAACAGC chr2:63671878-63671958 50 1.22e-04 aggcaaatag aaaccgaa actcttcttc chr4:185189246-185189326 12 1.22e-04 cgccatagcg aaaccgaa acctcattac chr9:14992182-14992262 35 1.22e-04 agacaaaaca aaaccgaa accaaagcgg chr12:83550799-83550879 50 1.38e-04 atacaaagaa aaggtgaa tgcacatcag chr7:21392619-21392699 41 1.56e-04 AGTGAAATCG AAACTGGA ACTCAGTTAT chr3:9958753-9958833 29 1.78e-04 GCCGGGAGCC AAAACGAA AGCACTCCGT chr1:205196950-205197030 3 1.78e-04 CA AAAACGAA GCTGCGCGAC chr22:18632785-18632865 62 1.78e-04 CATTCAGTGG AAAACGAA AGCTGGGCGG chr3:151911478-151911558 21 1.78e-04 ATCTAGACTA AAAACGAA ACTAGTTCTT chr19:29228055-29228135 15 1.78e-04 TCCCATAATG AAAACGAA ACCAAAGAAA chr8:61993355-61993435 12 2.08e-04 ATAAATGCTG GAAGTGAA AGTGGCCTGG chr1:222182602-222182682 12 2.29e-04 CTGCAGGAGC ATAGTGAA TTAAAATGGT chr17:46386087-46386167 39 2.76e-04 ccttatctgt aaaatgga gataaaaata chr5:103425028-103425108 34 2.76e-04 GGCTGACAAG AAAGTAAA ACCAAAAGAC chr2:20776557-20776637 3 2.93e-04 GG AAGCTGAA CTTATCACCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:34695835-34695915 2.1e-05 44_[+2]_28 chr2:183954286-183954366 2.1e-05 46_[+2]_26 chr7:134832737-134832817 2.1e-05 34_[+2]_38 chr3:40242404-40242484 2.1e-05 32_[+2]_40 chr1:197701551-197701631 2.1e-05 37_[+2]_35 chr2:152144792-152144872 2.1e-05 25_[+2]_47 chr21:17104796-17104876 2.1e-05 39_[+2]_33 chr3:142935715-142935795 2.1e-05 18_[+2]_54 chr4:8539072-8539152 2.1e-05 46_[+2]_26 chr17:80293088-80293168 2.1e-05 39_[+2]_33 chr3:197575130-197575210 2.1e-05 40_[+2]_32 chr3:196001660-196001740 2.1e-05 47_[+2]_25 chr17:56024342-56024422 2.1e-05 70_[+2]_2 chr2:166759584-166759664 2.1e-05 2_[+2]_70 chr11:61783218-61783298 2.1e-05 12_[+2]_60 chr1:114402286-114402366 2.1e-05 32_[+2]_40 chr22:36635607-36635687 2.1e-05 16_[+2]_56 chr4:17387216-17387296 2.1e-05 20_[+2]_52 chr11:114217490-11421757 2.1e-05 8_[+2]_64 chr2:171086395-171086475 2.1e-05 36_[+2]_36 chr15:70820701-70820781 2.1e-05 39_[+2]_33 chr6:169252007-169252087 2.1e-05 10_[+2]_62 chr1:155607364-155607444 2.1e-05 20_[+2]_52 chr7:112897361-112897441 2.1e-05 36_[+2]_36 chr16:53986496-53986576 2.1e-05 27_[+2]_45 chr5:10596040-10596120 2.1e-05 32_[+2]_40 chr1:230305614-230305694 2.1e-05 44_[+2]_28 chr2:196397883-196397963 2.1e-05 57_[+2]_15 chr1:228328993-228329073 2.1e-05 29_[+2]_43 chr1:212112177-212112257 2.1e-05 37_[+2]_35 chr4:82668454-82668534 2.1e-05 15_[+2]_57 chr7:12297391-12297471 2.1e-05 3_[+2]_69 chr12:10517693-10517773 2.1e-05 8_[+2]_64 chr9:110008700-110008780 2.1e-05 8_[+2]_64 chr17:43304602-43304682 2.1e-05 12_[+2]_60 chr11:20382355-20382435 2.1e-05 46_[+2]_26 chrX:154862259-154862339 2.1e-05 37_[+2]_35 chr8:145060603-145060683 2.1e-05 20_[+2]_52 chr19:47217866-47217946 2.1e-05 7_[+2]_65 chr6:74364695-74364775 2.1e-05 13_[+2]_59 chr10:120891280-12089136 2.1e-05 40_[+2]_32 chr1:248070099-248070179 2.1e-05 21_[+2]_51 chr4:185338477-185338557 2.1e-05 8_[+2]_64 chr13:28029633-28029713 2.1e-05 12_[+2]_60 chrX:40504144-40504224 2.1e-05 10_[+2]_62 chr1:89594641-89594721 2.1e-05 36_[+2]_36 chr10:44118963-44119043 2.1e-05 13_[+2]_59 chr13:44848627-44848707 2.1e-05 47_[+2]_25 chr12:13180104-13180184 2.1e-05 29_[+2]_43 chr5:96212162-96212242 2.1e-05 12_[+2]_60 chr5:81074975-81075055 2.1e-05 27_[+2]_45 chr1:33427987-33428067 2.1e-05 30_[+2]_42 chr20:5059260-5059340 2.1e-05 20_[+2]_52 chr8:29356980-29357060 2.1e-05 38_[+2]_34 chr3:62431140-62431220 2.1e-05 44_[+2]_28 chr2:149310716-149310796 2.1e-05 8_[+2]_64 chr8:20875361-20875441 2.1e-05 22_[+2]_50 chr17:46590668-46590748 2.1e-05 40_[+2]_32 chr11:63304230-63304310 2.1e-05 34_[+2]_38 chr1:23445890-23445970 2.1e-05 6_[+2]_66 chr10:90734877-90734957 2.1e-05 4_[+2]_68 chr19:42553346-42553426 2.1e-05 24_[+2]_48 chr12:68630492-68630572 2.1e-05 44_[+2]_28 chr1:161014752-161014832 2.1e-05 27_[+2]_45 chr2:64994286-64994366 2.1e-05 18_[+2]_54 chr17:33868218-33868298 2.1e-05 43_[+2]_29 chr5:138720912-138720992 4.3e-05 36_[+2]_36 chr7:142956039-142956119 4.3e-05 40_[+2]_32 chr14:91580936-91581016 4.3e-05 37_[+2]_35 chr7:150104150-150104230 4.3e-05 58_[+2]_14 chr21:42792472-42792552 4.3e-05 30_[+2]_42 chr22:30443456-30443536 4.3e-05 4_[+2]_68 chrX:41190937-41191017 4.3e-05 21_[+2]_51 chr6:27088839-27088919 4.3e-05 6_[+2]_66 chr6:34625298-34625378 4.3e-05 23_[+2]_49 chr3:122283138-122283218 4.3e-05 41_[+2]_31 chr10:3871221-3871301 4.3e-05 14_[+2]_58 chr2:191888232-191888312 4.3e-05 11_[+2]_61 chr6:133134269-133134349 4.3e-05 56_[+2]_16 chr8:90742285-90742365 4.3e-05 33_[+2]_39 chr11:46582380-46582460 4.3e-05 40_[+2]_32 chr22:36044382-36044462 4.3e-05 23_[+2]_49 chr8:124049940-124050020 4.3e-05 31_[+2]_41 chr17:80377532-80377612 4.3e-05 17_[+2]_55 chr17:1992951-1993031 4.3e-05 25_[+2]_47 chr1:78224860-78224940 6e-05 49_[+2]_23 chr8:71126851-71126931 6e-05 17_[+2]_55 chr6:32811793-32811873 6e-05 26_[+2]_46 chr3:122399632-122399712 6e-05 25_[+2]_47 chr19:10196906-10196986 6e-05 44_[+2]_28 chr12:42492028-42492108 6e-05 41_[+2]_31 chr5:98369220-98369300 8.7e-05 3_[+2]_69 chr1:59485972-59486052 8.7e-05 17_[+2]_55 chr11:57333761-57333841 8.7e-05 29_[+2]_43 chr4:15655184-15655264 0.0001 20_[+2]_52 chr7:107661128-107661208 0.0001 8_[+2]_64 chr14:58711924-58712004 0.0001 35_[+2]_37 chr17:41158755-41158835 0.0001 35_[+2]_37 chr2:63671878-63671958 0.00012 49_[+2]_23 chr4:185189246-185189326 0.00012 11_[+2]_61 chr9:14992182-14992262 0.00012 34_[+2]_38 chr12:83550799-83550879 0.00014 49_[+2]_23 chr7:21392619-21392699 0.00016 40_[+2]_32 chr3:9958753-9958833 0.00018 28_[+2]_44 chr1:205196950-205197030 0.00018 2_[+2]_70 chr22:18632785-18632865 0.00018 61_[+2]_11 chr3:151911478-151911558 0.00018 20_[+2]_52 chr19:29228055-29228135 0.00018 14_[+2]_58 chr8:61993355-61993435 0.00021 11_[+2]_61 chr1:222182602-222182682 0.00023 11_[+2]_61 chr17:46386087-46386167 0.00028 38_[+2]_34 chr5:103425028-103425108 0.00028 33_[+2]_39 chr2:20776557-20776637 0.00029 2_[+2]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAGTGAA width=8 seqs=113 chr5:34695835-34695915 ( 45) AAAGTGAA 1 chr2:183954286-183954366 ( 47) AAAGTGAA 1 chr7:134832737-134832817 ( 35) AAAGTGAA 1 chr3:40242404-40242484 ( 33) AAAGTGAA 1 chr1:197701551-197701631 ( 38) AAAGTGAA 1 chr2:152144792-152144872 ( 26) AAAGTGAA 1 chr21:17104796-17104876 ( 40) AAAGTGAA 1 chr3:142935715-142935795 ( 19) AAAGTGAA 1 chr4:8539072-8539152 ( 47) AAAGTGAA 1 chr17:80293088-80293168 ( 40) AAAGTGAA 1 chr3:197575130-197575210 ( 41) AAAGTGAA 1 chr3:196001660-196001740 ( 48) AAAGTGAA 1 chr17:56024342-56024422 ( 71) AAAGTGAA 1 chr2:166759584-166759664 ( 3) AAAGTGAA 1 chr11:61783218-61783298 ( 13) AAAGTGAA 1 chr1:114402286-114402366 ( 33) AAAGTGAA 1 chr22:36635607-36635687 ( 17) AAAGTGAA 1 chr4:17387216-17387296 ( 21) AAAGTGAA 1 chr11:114217490-11421757 ( 9) AAAGTGAA 1 chr2:171086395-171086475 ( 37) AAAGTGAA 1 chr15:70820701-70820781 ( 40) AAAGTGAA 1 chr6:169252007-169252087 ( 11) AAAGTGAA 1 chr1:155607364-155607444 ( 21) AAAGTGAA 1 chr7:112897361-112897441 ( 37) AAAGTGAA 1 chr16:53986496-53986576 ( 28) AAAGTGAA 1 chr5:10596040-10596120 ( 33) AAAGTGAA 1 chr1:230305614-230305694 ( 45) AAAGTGAA 1 chr2:196397883-196397963 ( 58) AAAGTGAA 1 chr1:228328993-228329073 ( 30) AAAGTGAA 1 chr1:212112177-212112257 ( 38) AAAGTGAA 1 chr4:82668454-82668534 ( 16) AAAGTGAA 1 chr7:12297391-12297471 ( 4) AAAGTGAA 1 chr12:10517693-10517773 ( 9) AAAGTGAA 1 chr9:110008700-110008780 ( 9) AAAGTGAA 1 chr17:43304602-43304682 ( 13) AAAGTGAA 1 chr11:20382355-20382435 ( 47) AAAGTGAA 1 chrX:154862259-154862339 ( 38) AAAGTGAA 1 chr8:145060603-145060683 ( 21) AAAGTGAA 1 chr19:47217866-47217946 ( 8) AAAGTGAA 1 chr6:74364695-74364775 ( 14) AAAGTGAA 1 chr10:120891280-12089136 ( 41) AAAGTGAA 1 chr1:248070099-248070179 ( 22) AAAGTGAA 1 chr4:185338477-185338557 ( 9) AAAGTGAA 1 chr13:28029633-28029713 ( 13) AAAGTGAA 1 chrX:40504144-40504224 ( 11) AAAGTGAA 1 chr1:89594641-89594721 ( 37) AAAGTGAA 1 chr10:44118963-44119043 ( 14) AAAGTGAA 1 chr13:44848627-44848707 ( 48) AAAGTGAA 1 chr12:13180104-13180184 ( 30) AAAGTGAA 1 chr5:96212162-96212242 ( 13) AAAGTGAA 1 chr5:81074975-81075055 ( 28) AAAGTGAA 1 chr1:33427987-33428067 ( 31) AAAGTGAA 1 chr20:5059260-5059340 ( 21) AAAGTGAA 1 chr8:29356980-29357060 ( 39) AAAGTGAA 1 chr3:62431140-62431220 ( 45) AAAGTGAA 1 chr2:149310716-149310796 ( 9) AAAGTGAA 1 chr8:20875361-20875441 ( 23) AAAGTGAA 1 chr17:46590668-46590748 ( 41) AAAGTGAA 1 chr11:63304230-63304310 ( 35) AAAGTGAA 1 chr1:23445890-23445970 ( 7) AAAGTGAA 1 chr10:90734877-90734957 ( 5) AAAGTGAA 1 chr19:42553346-42553426 ( 25) AAAGTGAA 1 chr12:68630492-68630572 ( 45) AAAGTGAA 1 chr1:161014752-161014832 ( 28) AAAGTGAA 1 chr2:64994286-64994366 ( 19) AAAGTGAA 1 chr17:33868218-33868298 ( 44) AAAGTGAA 1 chr5:138720912-138720992 ( 37) AAACTGAA 1 chr7:142956039-142956119 ( 41) AAACTGAA 1 chr14:91580936-91581016 ( 38) AAACTGAA 1 chr7:150104150-150104230 ( 59) AAACTGAA 1 chr21:42792472-42792552 ( 31) AAACTGAA 1 chr22:30443456-30443536 ( 5) AAACTGAA 1 chrX:41190937-41191017 ( 22) AAACTGAA 1 chr6:27088839-27088919 ( 7) AAACTGAA 1 chr6:34625298-34625378 ( 24) AAACTGAA 1 chr3:122283138-122283218 ( 42) AAACTGAA 1 chr10:3871221-3871301 ( 15) AAACTGAA 1 chr2:191888232-191888312 ( 12) AAACTGAA 1 chr6:133134269-133134349 ( 57) AAACTGAA 1 chr8:90742285-90742365 ( 34) AAACTGAA 1 chr11:46582380-46582460 ( 41) AAACTGAA 1 chr22:36044382-36044462 ( 24) AAACTGAA 1 chr8:124049940-124050020 ( 32) AAACTGAA 1 chr17:80377532-80377612 ( 18) AAACTGAA 1 chr17:1992951-1993031 ( 26) AAACTGAA 1 chr1:78224860-78224940 ( 50) AAAGCGAA 1 chr8:71126851-71126931 ( 18) AAAGCGAA 1 chr6:32811793-32811873 ( 27) AAAGCGAA 1 chr3:122399632-122399712 ( 26) AAAGCGAA 1 chr19:10196906-10196986 ( 45) AAAGCGAA 1 chr12:42492028-42492108 ( 42) AAAGCGAA 1 chr5:98369220-98369300 ( 4) AAAATGAA 1 chr1:59485972-59486052 ( 18) AAAATGAA 1 chr11:57333761-57333841 ( 30) AAAATGAA 1 chr4:15655184-15655264 ( 21) AAAGTGGA 1 chr7:107661128-107661208 ( 9) AAAGTGGA 1 chr14:58711924-58712004 ( 36) AAAGTGGA 1 chr17:41158755-41158835 ( 36) AAAGTGGA 1 chr2:63671878-63671958 ( 50) AAACCGAA 1 chr4:185189246-185189326 ( 12) AAACCGAA 1 chr9:14992182-14992262 ( 35) AAACCGAA 1 chr12:83550799-83550879 ( 50) AAGGTGAA 1 chr7:21392619-21392699 ( 41) AAACTGGA 1 chr3:9958753-9958833 ( 29) AAAACGAA 1 chr1:205196950-205197030 ( 3) AAAACGAA 1 chr22:18632785-18632865 ( 62) AAAACGAA 1 chr3:151911478-151911558 ( 21) AAAACGAA 1 chr19:29228055-29228135 ( 15) AAAACGAA 1 chr8:61993355-61993435 ( 12) GAAGTGAA 1 chr1:222182602-222182682 ( 12) ATAGTGAA 1 chr17:46386087-46386167 ( 39) AAAATGGA 1 chr5:103425028-103425108 ( 34) AAAGTAAA 1 chr2:20776557-20776637 ( 3) AAGCTGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.94421 E= 7.2e-146 185 -1346 -462 -1346 185 -1346 -1346 -495 183 -1346 -362 -1346 -179 -13 170 -1346 -1346 -91 -1346 167 -496 -1346 219 -1346 178 -1346 -203 -1346 186 -1346 -1346 -1346 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 113 E= 7.2e-146 0.991150 0.000000 0.008850 0.000000 0.991150 0.000000 0.000000 0.008850 0.982301 0.000000 0.017699 0.000000 0.079646 0.212389 0.707965 0.000000 0.000000 0.123894 0.000000 0.876106 0.008850 0.000000 0.991150 0.000000 0.946903 0.000000 0.053097 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAGTGAA MEME-2 regular expression -------------------------------------------------------------------------------- AAA[GC]TGAA -------------------------------------------------------------------------------- Time 8.53 secs. ******************************************************************************** ******************************************************************************** MOTIF RGCAGRAR MEME-3 width = 8 sites = 54 llr = 408 E-value = 1.7e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 Description -------------------------------------------------------------------------------- Simplified A 5::7:576 pos.-specific C ::7::::: probability G 5a3:a534 matrix T :::3:::: bits 2.2 * * 2.0 * * 1.8 * * 1.5 * * Relative 1.3 ** * Entropy 1.1 ******** (10.9 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AGCAGGAA consensus G GT AGG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:26402346-26402426 10 1.08e-05 GGGAGGTAG GGCAGGAA TTTTTCTTCA chr6:34625298-34625378 57 1.08e-05 CTGGAATCCT GGCAGGAA GCTGGAGAGG chr3:183259651-183259731 15 1.93e-05 GGATAGCCTG GGCAGGAG AAGGGTTGAT chr5:36419810-36419890 11 3.31e-05 TCTGTTTTAC AGCAGGAA acacacacac chr10:91152238-91152318 3 3.31e-05 TC AGCAGGAA TTCCGCTAGC chr8:145060603-145060683 9 3.31e-05 CTGCTGGG AGCAGGAA AACAAAAGTG chr1:179098935-179099015 15 3.31e-05 ACTATCCAAA AGCAGGAA GTAAAACTGA chr16:18957425-18957505 47 3.31e-05 TAAATTGCTC AGCAGGAA TCTGATAAGA chr19:47217866-47217946 72 5.76e-05 ACCTGGACCT GGCAGAAA A chr1:59485972-59486052 45 5.76e-05 AATTGACCTA GGCAGAAA GTTAGGTTGT chr16:53986496-53986576 68 6.85e-05 TATATTCCAA GGCAGAAG AGACA chr21:42792472-42792552 15 8.60e-05 GAAACCAGCG AGCAGAAA TGAAACCGAA chr16:68798973-68799053 7 8.60e-05 AAGCTG AGCAGAAA ACAGATCCAG chrX:40504144-40504224 60 8.60e-05 actaatcaga agcagaaa atgtcatcag chr3:193550051-193550131 39 8.60e-05 atctctccaa agcagaaa cttcccagtt chr8:20875361-20875441 45 8.60e-05 aataatgact agcagaaa ttgagtttgc chr17:1992951-1993031 15 8.60e-05 CAAAGAACCA AGCAGAAA GGAAAACTGA chr5:34695835-34695915 58 9.97e-05 GTGAAAGTAA AGCAGAAG CACtttcctt chr2:152146417-152146497 69 9.97e-05 TGCGGAGGAA AGCAGAAG TATA chr4:123745829-123745909 42 9.97e-05 ttaagaaaag agcagaag caagagggtt chr17:41158755-41158835 15 1.08e-04 AGCGCCAGAA GGCAGGGA TTTCACGGAA chr6:26440584-26440664 7 1.36e-04 AGGTAC GGCTGGAA TTTTTCTGCA chr19:10196906-10196986 63 1.36e-04 ACAGGGGCCG GGGAGGAA GGGCGGAGCC chr7:12297391-12297471 73 1.36e-04 ggccaaatgt ggctggaa chr1:248070099-248070179 45 1.36e-04 tttttccact gggaggaa gtctgttcct chr6:26365278-26365358 11 1.63e-04 AGGGAGGTAG GGCTGGAG TTTTTCCTCA chr2:191888232-191888312 72 1.63e-04 gaagctgttg gggaggag t chr11:57333761-57333841 66 1.63e-04 agagcctgca ggctggag gcctgtg chr2:183954286-183954366 55 1.98e-04 caaaagtgaa agcagggg agagcagtca chr6:32811793-32811873 16 1.98e-04 CCGCTCTCGG AGGAGGAA GTGAAAGCGA chr4:82668454-82668534 54 1.98e-04 AAGTGATAAG AGCAGGGG TCAGCTGGCA chr16:11334726-11334806 62 2.30e-04 AGTTTTCTGG AGCTGGAG CAAAGCAGGT chr3:9958753-9958833 56 2.30e-04 TGCTGGAAGT AGGAGGAG AGTCAGGACT chr12:83550799-83550879 66 2.30e-04 aatgcacatc agctggag aggacga chr22:36044382-36044462 38 2.30e-04 TGAAAGTGAC AGCTGGAG CCCATGATTT chr13:44848627-44848707 27 2.30e-04 ccgagggaga ggcagaga gagagggaaa chr2:102872861-102872941 62 2.30e-04 GACTTAACTA GGCAGAGA TGCCTATTTT chr5:64778708-64778788 60 2.65e-04 AAAGCCGCTG GGGAGAAA ATGCCCAGTG chr20:5059260-5059340 12 2.65e-04 ctaggaccgt ggcagagg gaaagtgaaa chr2:20776557-20776637 34 3.00e-04 GGACTATGCA GGCTGAAG TTTCTGTTTC chr7:150104150-150104230 48 3.44e-04 TGAAAATCCT AGCTGAAA CTGAAACTGA chr8:29356980-29357060 28 3.44e-04 GCTTTGCTTT AGCTGAAA GGGAAAGTGA chr17:80377532-80377612 32 3.44e-04 TGAAAGTATA AGGAGAAA GGCAAAGGGA chr10:91061688-91061768 44 3.71e-04 TTGTAACGTC AGCTGAAG GGAAACAAAC chr3:122283138-122283218 20 3.87e-04 GCCGGGAACA GGGAGGGA CCTCCAGGGA chr11:4414872-4414952 71 3.87e-04 gagaggaaag gggaggga gg chr9:102972435-102972515 70 3.87e-04 TACGGTCAAA GGGAGGGA TAG chr1:46528409-46528489 23 4.10e-04 gcacttaCTA GGCTGGGG TGtttggttt chr1:118277819-118277899 2 4.10e-04 A GGGAGGGG CCAATGTGAC chr8:10488029-10488109 62 4.68e-04 CCCGTAGGGG AGCTGGGG TCAGAGAAGG chr7:120640143-120640223 41 5.28e-04 TGGCCTTTTG GGGTGAAA GGAATGTTTT chr17:46590668-46590748 31 5.28e-04 GGCTGATGAT GGGAGAGG TGAAAGTGAA chr8:61993355-61993435 40 5.65e-04 AAGTTCACAA AGGAGAGA GGAAGTGAGC chr9:96263669-96263749 36 6.15e-04 AGTATTTTAG AGGTGAAG TTTACTCAGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:26402346-26402426 1.1e-05 9_[+3]_63 chr6:34625298-34625378 1.1e-05 56_[+3]_16 chr3:183259651-183259731 1.9e-05 14_[+3]_58 chr5:36419810-36419890 3.3e-05 10_[+3]_62 chr10:91152238-91152318 3.3e-05 2_[+3]_70 chr8:145060603-145060683 3.3e-05 8_[+3]_64 chr1:179098935-179099015 3.3e-05 14_[+3]_58 chr16:18957425-18957505 3.3e-05 46_[+3]_26 chr19:47217866-47217946 5.8e-05 71_[+3]_1 chr1:59485972-59486052 5.8e-05 44_[+3]_28 chr16:53986496-53986576 6.8e-05 67_[+3]_5 chr21:42792472-42792552 8.6e-05 14_[+3]_58 chr16:68798973-68799053 8.6e-05 6_[+3]_66 chrX:40504144-40504224 8.6e-05 59_[+3]_13 chr3:193550051-193550131 8.6e-05 38_[+3]_34 chr8:20875361-20875441 8.6e-05 44_[+3]_28 chr17:1992951-1993031 8.6e-05 14_[+3]_58 chr5:34695835-34695915 0.0001 57_[+3]_15 chr2:152146417-152146497 0.0001 68_[+3]_4 chr4:123745829-123745909 0.0001 41_[+3]_31 chr17:41158755-41158835 0.00011 14_[+3]_58 chr6:26440584-26440664 0.00014 6_[+3]_66 chr19:10196906-10196986 0.00014 62_[+3]_10 chr7:12297391-12297471 0.00014 72_[+3] chr1:248070099-248070179 0.00014 44_[+3]_28 chr6:26365278-26365358 0.00016 10_[+3]_62 chr2:191888232-191888312 0.00016 71_[+3]_1 chr11:57333761-57333841 0.00016 65_[+3]_7 chr2:183954286-183954366 0.0002 54_[+3]_18 chr6:32811793-32811873 0.0002 15_[+3]_57 chr4:82668454-82668534 0.0002 53_[+3]_19 chr16:11334726-11334806 0.00023 61_[+3]_11 chr3:9958753-9958833 0.00023 55_[+3]_17 chr12:83550799-83550879 0.00023 65_[+3]_7 chr22:36044382-36044462 0.00023 37_[+3]_35 chr13:44848627-44848707 0.00023 26_[+3]_46 chr2:102872861-102872941 0.00023 61_[+3]_11 chr5:64778708-64778788 0.00026 59_[+3]_13 chr20:5059260-5059340 0.00026 11_[+3]_61 chr2:20776557-20776637 0.0003 33_[+3]_39 chr7:150104150-150104230 0.00034 47_[+3]_25 chr8:29356980-29357060 0.00034 27_[+3]_45 chr17:80377532-80377612 0.00034 31_[+3]_41 chr10:91061688-91061768 0.00037 43_[+3]_29 chr3:122283138-122283218 0.00039 19_[+3]_53 chr11:4414872-4414952 0.00039 70_[+3]_2 chr9:102972435-102972515 0.00039 69_[+3]_3 chr1:46528409-46528489 0.00041 22_[+3]_50 chr1:118277819-118277899 0.00041 1_[+3]_71 chr8:10488029-10488109 0.00047 61_[+3]_11 chr7:120640143-120640223 0.00053 40_[+3]_32 chr17:46590668-46590748 0.00053 30_[+3]_42 chr8:61993355-61993435 0.00057 39_[+3]_33 chr9:96263669-96263749 0.00062 35_[+3]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RGCAGRAR width=8 seqs=54 chr6:26402346-26402426 ( 10) GGCAGGAA 1 chr6:34625298-34625378 ( 57) GGCAGGAA 1 chr3:183259651-183259731 ( 15) GGCAGGAG 1 chr5:36419810-36419890 ( 11) AGCAGGAA 1 chr10:91152238-91152318 ( 3) AGCAGGAA 1 chr8:145060603-145060683 ( 9) AGCAGGAA 1 chr1:179098935-179099015 ( 15) AGCAGGAA 1 chr16:18957425-18957505 ( 47) AGCAGGAA 1 chr19:47217866-47217946 ( 72) GGCAGAAA 1 chr1:59485972-59486052 ( 45) GGCAGAAA 1 chr16:53986496-53986576 ( 68) GGCAGAAG 1 chr21:42792472-42792552 ( 15) AGCAGAAA 1 chr16:68798973-68799053 ( 7) AGCAGAAA 1 chrX:40504144-40504224 ( 60) AGCAGAAA 1 chr3:193550051-193550131 ( 39) AGCAGAAA 1 chr8:20875361-20875441 ( 45) AGCAGAAA 1 chr17:1992951-1993031 ( 15) AGCAGAAA 1 chr5:34695835-34695915 ( 58) AGCAGAAG 1 chr2:152146417-152146497 ( 69) AGCAGAAG 1 chr4:123745829-123745909 ( 42) AGCAGAAG 1 chr17:41158755-41158835 ( 15) GGCAGGGA 1 chr6:26440584-26440664 ( 7) GGCTGGAA 1 chr19:10196906-10196986 ( 63) GGGAGGAA 1 chr7:12297391-12297471 ( 73) GGCTGGAA 1 chr1:248070099-248070179 ( 45) GGGAGGAA 1 chr6:26365278-26365358 ( 11) GGCTGGAG 1 chr2:191888232-191888312 ( 72) GGGAGGAG 1 chr11:57333761-57333841 ( 66) GGCTGGAG 1 chr2:183954286-183954366 ( 55) AGCAGGGG 1 chr6:32811793-32811873 ( 16) AGGAGGAA 1 chr4:82668454-82668534 ( 54) AGCAGGGG 1 chr16:11334726-11334806 ( 62) AGCTGGAG 1 chr3:9958753-9958833 ( 56) AGGAGGAG 1 chr12:83550799-83550879 ( 66) AGCTGGAG 1 chr22:36044382-36044462 ( 38) AGCTGGAG 1 chr13:44848627-44848707 ( 27) GGCAGAGA 1 chr2:102872861-102872941 ( 62) GGCAGAGA 1 chr5:64778708-64778788 ( 60) GGGAGAAA 1 chr20:5059260-5059340 ( 12) GGCAGAGG 1 chr2:20776557-20776637 ( 34) GGCTGAAG 1 chr7:150104150-150104230 ( 48) AGCTGAAA 1 chr8:29356980-29357060 ( 28) AGCTGAAA 1 chr17:80377532-80377612 ( 32) AGGAGAAA 1 chr10:91061688-91061768 ( 44) AGCTGAAG 1 chr3:122283138-122283218 ( 20) GGGAGGGA 1 chr11:4414872-4414952 ( 71) GGGAGGGA 1 chr9:102972435-102972515 ( 70) GGGAGGGA 1 chr1:46528409-46528489 ( 23) GGCTGGGG 1 chr1:118277819-118277899 ( 2) GGGAGGGG 1 chr8:10488029-10488109 ( 62) AGCTGGGG 1 chr7:120640143-120640223 ( 41) GGGTGAAA 1 chr17:46590668-46590748 ( 31) GGGAGAGG 1 chr8:61993355-61993435 ( 40) AGGAGAGA 1 chr9:96263669-96263749 ( 36) AGGTGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.0499 E= 1.7e-002 91 -1240 115 -1240 -1240 -1240 220 -1240 -1240 164 35 -1240 139 -1240 -1240 1 -1240 -1240 220 -1240 75 -1240 130 -1240 143 -1240 25 -1240 110 -1240 91 -1240 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 1.7e-002 0.518519 0.000000 0.481481 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.722222 0.277778 0.000000 0.722222 0.000000 0.000000 0.277778 0.000000 0.000000 1.000000 0.000000 0.462963 0.000000 0.537037 0.000000 0.740741 0.000000 0.259259 0.000000 0.592593 0.000000 0.407407 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RGCAGRAR MEME-3 regular expression -------------------------------------------------------------------------------- [AG]G[CG][AT]G[GA][AG][AG] -------------------------------------------------------------------------------- Time 11.93 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGGGCKK MEME-4 width = 8 sites = 16 llr = 152 E-value = 3.5e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 Description -------------------------------------------------------------------------------- Simplified A 3a:::::: pos.-specific C 8::::a1: probability G ::aaa:46 matrix T ::::::64 bits 2.2 **** 2.0 **** 1.8 ***** 1.5 ***** Relative 1.3 ****** Entropy 1.1 ****** * (13.7 bits) 0.9 ****** * 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGGGCTG consensus A GT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:176727400-176727480 12 9.06e-06 TCAGCAGCCA CAGGGCTG CCCAAGCCTC chr17:46590668-46590748 18 9.06e-06 AGCTACCAAT CAGGGCTG ATGATGGGAG chr6:32806533-32806613 5 1.62e-05 CGGC CAGGGCGG GCGTCAGGGC chr10:115439588-11543966 21 1.62e-05 CGGCCCTACC CAGGGCGG CTCCTCCCTC chr19:10196906-10196986 8 1.62e-05 GCGGAGC CAGGGCGG AGCCAGCGCG chr3:122283138-122283218 67 1.62e-05 GCCCAGTCCG CAGGGCGG GCCGCG chr5:138720912-138720992 3 2.77e-05 CC CAGGGCTT GGCCAGATCA chr7:121081320-121081400 72 2.77e-05 TTTTTCCCCT CAGGGCTT T chr12:50665837-50665917 28 2.77e-05 TCTCCAAATA CAGGGCTT CTTAGTTTCA chr7:21392619-21392699 71 2.77e-05 GCTTTCCAGA CAGGGCTT GA chr7:92747357-92747437 11 3.67e-05 TCAGAAACAG CAGGGCGT GTTTAACAAC chr5:103425028-103425108 21 4.75e-05 AGGCACCCCC AAGGGCTG ACAAGAAAGT chr13:31147035-31147115 40 4.75e-05 TACAGATGCC AAGGGCTG ACAGTTTCAC chr6:33281833-33281913 48 5.60e-05 CTTTCCTCCA AAGGGCGG CATGAGGGGC chr7:120640143-120640223 1 7.73e-05 . AAGGGCTT CCTGTTATCA chr21:15975064-15975144 36 7.73e-05 GTCAGCAGAC CAGGGCCG TTTCCTTTCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:176727400-176727480 9.1e-06 11_[+4]_61 chr17:46590668-46590748 9.1e-06 17_[+4]_55 chr6:32806533-32806613 1.6e-05 4_[+4]_68 chr10:115439588-11543966 1.6e-05 20_[+4]_52 chr19:10196906-10196986 1.6e-05 7_[+4]_65 chr3:122283138-122283218 1.6e-05 66_[+4]_6 chr5:138720912-138720992 2.8e-05 2_[+4]_70 chr7:121081320-121081400 2.8e-05 71_[+4]_1 chr12:50665837-50665917 2.8e-05 27_[+4]_45 chr7:21392619-21392699 2.8e-05 70_[+4]_2 chr7:92747357-92747437 3.7e-05 10_[+4]_62 chr5:103425028-103425108 4.8e-05 20_[+4]_52 chr13:31147035-31147115 4.8e-05 39_[+4]_33 chr6:33281833-33281913 5.6e-05 47_[+4]_25 chr7:120640143-120640223 7.7e-05 [+4]_72 chr21:15975064-15975144 7.7e-05 35_[+4]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGGGCKK width=8 seqs=16 chr5:176727400-176727480 ( 12) CAGGGCTG 1 chr17:46590668-46590748 ( 18) CAGGGCTG 1 chr6:32806533-32806613 ( 5) CAGGGCGG 1 chr10:115439588-11543966 ( 21) CAGGGCGG 1 chr19:10196906-10196986 ( 8) CAGGGCGG 1 chr3:122283138-122283218 ( 67) CAGGGCGG 1 chr5:138720912-138720992 ( 3) CAGGGCTT 1 chr7:121081320-121081400 ( 72) CAGGGCTT 1 chr12:50665837-50665917 ( 28) CAGGGCTT 1 chr7:21392619-21392699 ( 71) CAGGGCTT 1 chr7:92747357-92747437 ( 11) CAGGGCGT 1 chr5:103425028-103425108 ( 21) AAGGGCTG 1 chr13:31147035-31147115 ( 40) AAGGGCTG 1 chr6:33281833-33281913 ( 48) AAGGGCGG 1 chr7:120640143-120640223 ( 1) AAGGGCTT 1 chr21:15975064-15975144 ( 36) CAGGGCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.477 E= 3.5e+002 -14 169 -1064 -1064 186 -1064 -1064 -1064 -1064 -1064 220 -1064 -1064 -1064 220 -1064 -1064 -1064 220 -1064 -1064 211 -1064 -1064 -1064 -189 79 103 -1064 -1064 152 45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 16 E= 3.5e+002 0.250000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.062500 0.375000 0.562500 0.000000 0.000000 0.625000 0.375000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGGCKK MEME-4 regular expression -------------------------------------------------------------------------------- [CA]AGGGC[TG][GT] -------------------------------------------------------------------------------- Time 15.24 secs. ******************************************************************************** ******************************************************************************** MOTIF TCYYTYCY MEME-5 width = 8 sites = 36 llr = 292 E-value = 4.8e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :a3617a3 probability G :::::::: matrix T a:7493:7 bits 2.2 * * 2.0 * * 1.8 ** * 1.5 ** * Relative 1.3 ** * * Entropy 1.1 ******** (11.7 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCTCTCCT consensus CT T C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:146070895-146070975 6 1.66e-05 TTTGA TCTCTCCT CTGGTGTTCT chr12:64853545-64853625 10 1.66e-05 TTCAGTCTC TCTCTCCT GCTTTGATTA chr21:36901616-36901696 24 1.66e-05 CTCTCCTGCC TCTCTCCT TTCACTTTCA chr8:90742285-90742365 2 1.66e-05 T TCTCTCCT CAGACATTAC chr20:3913502-3913582 29 1.66e-05 AGCATGCGTT TCTCTCCT ATAAAGACAC chr11:63304230-63304310 45 1.66e-05 AAAGTGAAAT TCTCTCCT TCAGCATAAA chr17:1992951-1993031 67 1.66e-05 CGGAGGCTGT TCTCTCCT AGGCTC chr1:205196950-205197030 68 4.45e-05 CCGCTGTCAC TCCCTCCT AGCCT chr17:56024342-56024422 18 4.45e-05 GCTCACTAGC TCTCTCCC AGCTGTGGGT chr1:27998782-27998862 40 4.45e-05 CATTTTCCCC TCTCTCCC AGCTCCTGCA chr10:44118963-44119043 45 4.45e-05 ggggttgaat tccctcct tttgtaacaa chr2:102872861-102872941 42 4.45e-05 CTTTCACTTC TCCCTCCT GTGACTTAAC chr7:100144515-100144595 49 6.42e-05 CCTGAGCTTA TCTTTCCT TGGGGGCATC chr14:77428456-77428536 18 6.42e-05 ACCGTGGGGT TCTTTCCT CCCTGCTCAG chr18:74921000-74921080 37 6.42e-05 tttcactttc tctttcct ctgaggatga chr7:6145726-6145806 49 8.38e-05 AGTTTCACTT TCTCTTCT GTATCTTTGA chr2:85812952-85813032 9 9.56e-05 atcccctt tccctccc tggtccttct chr2:44308638-44308718 59 1.29e-04 actttccctt tctttccc cttctcctca chrX:40504144-40504224 42 1.29e-04 cttgtgagat tctttccc actaatcaga chr1:33427987-33428067 8 1.29e-04 TAAAAGG TCCTTCCT GATACTTATT chr20:388898-388978 55 1.62e-04 ACTTTCACTT TCTCTTCC GCCGAAGCCG chr3:36949596-36949676 41 1.62e-04 ACTTTCTATT TCCCTTCT TACACAATCC chr11:5646099-5646179 19 1.62e-04 CTTCCCCTTT TCTCTTCC TGACAGCCCC chr4:169401661-169401741 31 1.85e-04 AGTTTCGGTT TCTTTTCT CCACCGCGAG chr14:55799474-55799554 47 1.85e-04 TAAACTTTTA TCTTTTCT GTGCAGTGGT chr6:119788761-119788841 71 1.85e-04 CGCTTTCAGT TCTTTTCT TC chr14:77420103-77420183 59 1.85e-04 TTTCACTTTC TCTTTTCT CCACAGAAGC chr2:9971045-9971125 32 1.99e-04 GCACTCCTTA TCCTTCCC CAGGGCTATG chr17:46662924-46663004 61 2.13e-04 GCTTTCGGTT TCCCTTCC GCCCAAATAT chr10:75677038-75677118 71 2.13e-04 TGGCCAGTTA TCCCTTCC TT chr21:17170040-17170120 8 2.27e-04 tggtttg tctcccct acttaacagt chr6:32811793-32811873 65 2.66e-04 GGAACAAGAC TCTTTTCC ACATCCCC chr1:65534324-65534404 65 2.66e-04 TTCGTGAGTT TCCTTTCT GGTTTTTT chr19:49977426-49977506 29 2.90e-04 CCCTTGACTG TCTCCCCC CAAAAATTTC chr4:6753383-6753463 8 2.90e-04 gtgaaac tcccccct aattcccagc chr19:10196906-10196986 31 2.90e-04 GCGCGCCGGG TCCCCCCT GAATCGAAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:146070895-146070975 1.7e-05 5_[+5]_67 chr12:64853545-64853625 1.7e-05 9_[+5]_63 chr21:36901616-36901696 1.7e-05 23_[+5]_49 chr8:90742285-90742365 1.7e-05 1_[+5]_71 chr20:3913502-3913582 1.7e-05 28_[+5]_44 chr11:63304230-63304310 1.7e-05 44_[+5]_28 chr17:1992951-1993031 1.7e-05 66_[+5]_6 chr1:205196950-205197030 4.5e-05 67_[+5]_5 chr17:56024342-56024422 4.5e-05 17_[+5]_55 chr1:27998782-27998862 4.5e-05 39_[+5]_33 chr10:44118963-44119043 4.5e-05 44_[+5]_28 chr2:102872861-102872941 4.5e-05 41_[+5]_31 chr7:100144515-100144595 6.4e-05 48_[+5]_24 chr14:77428456-77428536 6.4e-05 17_[+5]_55 chr18:74921000-74921080 6.4e-05 36_[+5]_36 chr7:6145726-6145806 8.4e-05 48_[+5]_24 chr2:85812952-85813032 9.6e-05 8_[+5]_64 chr2:44308638-44308718 0.00013 58_[+5]_14 chrX:40504144-40504224 0.00013 41_[+5]_31 chr1:33427987-33428067 0.00013 7_[+5]_65 chr20:388898-388978 0.00016 54_[+5]_18 chr3:36949596-36949676 0.00016 40_[+5]_32 chr11:5646099-5646179 0.00016 18_[+5]_54 chr4:169401661-169401741 0.00019 30_[+5]_42 chr14:55799474-55799554 0.00019 46_[+5]_26 chr6:119788761-119788841 0.00019 70_[+5]_2 chr14:77420103-77420183 0.00019 58_[+5]_14 chr2:9971045-9971125 0.0002 31_[+5]_41 chr17:46662924-46663004 0.00021 60_[+5]_12 chr10:75677038-75677118 0.00021 70_[+5]_2 chr21:17170040-17170120 0.00023 7_[+5]_65 chr6:32811793-32811873 0.00027 64_[+5]_8 chr1:65534324-65534404 0.00027 64_[+5]_8 chr19:49977426-49977506 0.00029 28_[+5]_44 chr4:6753383-6753463 0.00029 7_[+5]_65 chr19:10196906-10196986 0.00029 30_[+5]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCYYTYCY width=8 seqs=36 chr6:146070895-146070975 ( 6) TCTCTCCT 1 chr12:64853545-64853625 ( 10) TCTCTCCT 1 chr21:36901616-36901696 ( 24) TCTCTCCT 1 chr8:90742285-90742365 ( 2) TCTCTCCT 1 chr20:3913502-3913582 ( 29) TCTCTCCT 1 chr11:63304230-63304310 ( 45) TCTCTCCT 1 chr17:1992951-1993031 ( 67) TCTCTCCT 1 chr1:205196950-205197030 ( 68) TCCCTCCT 1 chr17:56024342-56024422 ( 18) TCTCTCCC 1 chr1:27998782-27998862 ( 40) TCTCTCCC 1 chr10:44118963-44119043 ( 45) TCCCTCCT 1 chr2:102872861-102872941 ( 42) TCCCTCCT 1 chr7:100144515-100144595 ( 49) TCTTTCCT 1 chr14:77428456-77428536 ( 18) TCTTTCCT 1 chr18:74921000-74921080 ( 37) TCTTTCCT 1 chr7:6145726-6145806 ( 49) TCTCTTCT 1 chr2:85812952-85813032 ( 9) TCCCTCCC 1 chr2:44308638-44308718 ( 59) TCTTTCCC 1 chrX:40504144-40504224 ( 42) TCTTTCCC 1 chr1:33427987-33428067 ( 8) TCCTTCCT 1 chr20:388898-388978 ( 55) TCTCTTCC 1 chr3:36949596-36949676 ( 41) TCCCTTCT 1 chr11:5646099-5646179 ( 19) TCTCTTCC 1 chr4:169401661-169401741 ( 31) TCTTTTCT 1 chr14:55799474-55799554 ( 47) TCTTTTCT 1 chr6:119788761-119788841 ( 71) TCTTTTCT 1 chr14:77420103-77420183 ( 59) TCTTTTCT 1 chr2:9971045-9971125 ( 32) TCCTTCCC 1 chr17:46662924-46663004 ( 61) TCCCTTCC 1 chr10:75677038-75677118 ( 71) TCCCTTCC 1 chr21:17170040-17170120 ( 8) TCTCCCCT 1 chr6:32811793-32811873 ( 65) TCTTTTCC 1 chr1:65534324-65534404 ( 65) TCCTTTCT 1 chr19:49977426-49977506 ( 29) TCTCCCCC 1 chr4:6753383-6753463 ( 8) TCCCCCCT 1 chr19:10196906-10196986 ( 31) TCCCCCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.8321 E= 4.8e+001 -1181 -1181 -1181 186 -1181 211 -1181 -1181 -1181 52 -1181 128 -1181 146 -1181 39 -1181 -106 -1181 169 -1181 152 -1181 28 -1181 211 -1181 -1181 -1181 52 -1181 128 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 36 E= 4.8e+001 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.000000 0.638889 0.000000 0.361111 0.000000 0.111111 0.000000 0.888889 0.000000 0.666667 0.000000 0.333333 0.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.666667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCYYTYCY MEME-5 regular expression -------------------------------------------------------------------------------- TC[TC][CT]T[CT]C[TC] -------------------------------------------------------------------------------- Time 18.53 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:33868218-33868298 7.17e-02 43_[+2(2.07e-05)]_29 chr2:64994286-64994366 6.83e-04 18_[+2(2.07e-05)]_54 chr1:161014752-161014832 1.17e-01 27_[+2(2.07e-05)]_45 chr12:68630492-68630572 5.91e-02 44_[+2(2.07e-05)]_28 chr19:42553346-42553426 5.04e-02 24_[+2(2.07e-05)]_48 chr10:90734877-90734957 6.72e-02 4_[+2(2.07e-05)]_68 chr17:1992951-1993031 9.21e-05 14_[+3(8.60e-05)]_3_[+2(4.29e-05)]_\ 33_[+5(1.66e-05)]_6 chr14:77420103-77420183 1.09e-03 48_[+1(2.34e-05)]_24 chr5:179263877-179263957 1.87e-02 37_[+1(2.34e-05)]_35 chr21:15975064-15975144 5.47e-04 35_[+4(7.73e-05)]_5_[+1(2.34e-05)]_\ 24 chr16:67970739-67970819 4.11e-02 25_[+1(4.17e-05)]_47 chr1:23445890-23445970 7.58e-03 6_[+2(2.07e-05)]_66 chr3:88081039-88081119 1.95e-01 63_[+1(2.34e-05)]_9 chr11:63304230-63304310 4.74e-04 28_[+2(2.07e-05)]_8_[+5(1.66e-05)]_\ 28 chr17:80377532-80377612 6.82e-03 17_[+2(4.29e-05)]_55 chr17:46590668-46590748 5.79e-06 17_[+4(9.06e-06)]_15_[+2(2.07e-05)]_\ 32 chr3:4397213-4397293 2.28e-02 69_[+1(2.34e-05)]_3 chr8:20875361-20875441 3.88e-04 22_[+2(2.07e-05)]_14_[+3(8.60e-05)]_\ 28 chr2:102872861-102872941 1.24e-04 26_[+1(2.34e-05)]_7_[+5(4.45e-05)]_\ 31 chr2:149310716-149310796 4.46e-02 8_[+2(2.07e-05)]_64 chr11:128701171-12870125 2.39e-02 41_[+1(2.34e-05)]_31 chr3:62431140-62431220 3.58e-02 38_[+2(2.07e-05)]_34 chr8:29356980-29357060 7.22e-04 38_[+2(2.07e-05)]_34 chr13:31147035-31147115 2.17e-03 39_[+4(4.75e-05)]_4_[+1(2.34e-05)]_\ 21 chr16:18957425-18957505 1.57e-03 26_[+1(2.34e-05)]_12_[+3(3.31e-05)]_\ 26 chr20:5059260-5059340 7.33e-03 20_[+2(2.07e-05)]_52 chr1:33427987-33428067 1.23e-03 30_[+2(2.07e-05)]_42 chr15:50540102-50540182 6.20e-03 45_[+5(6.42e-05)]_27 chr6:26494483-26494563 3.21e-01 80 chr1:179098935-179099015 4.16e-05 14_[+3(3.31e-05)]_34_[+1(2.34e-05)]_\ 16 chr3:193550051-193550131 1.21e-04 38_[+3(8.60e-05)]_8_[+1(2.34e-05)]_\ 18 chr5:81074975-81075055 1.19e-01 27_[+2(2.07e-05)]_45 chr1:65534324-65534404 1.91e-02 40_[+1(2.34e-05)]_32 chr5:96212162-96212242 2.35e-02 12_[+2(2.07e-05)]_60 chr12:13180104-13180184 5.18e-03 29_[+2(2.07e-05)]_43 chr19:29228055-29228135 5.16e-02 80 chr12:108496288-10849636 9.62e-02 80 chr13:44848627-44848707 1.60e-02 47_[+2(2.07e-05)]_25 chr11:102183606-10218368 7.01e-02 38_[+1(2.34e-05)]_4_[+1(6.36e-05)]_\ 22 chr20:47717642-47717722 2.21e-02 28_[+1(2.34e-05)]_44 chr10:44118963-44119043 3.74e-04 13_[+2(2.07e-05)]_23_[+5(4.45e-05)]_\ 28 chr8:124049940-124050020 7.95e-02 31_[+2(4.29e-05)]_41 chr22:36044382-36044462 1.24e-02 23_[+2(4.29e-05)]_49 chr1:89594641-89594721 2.60e-02 36_[+2(2.07e-05)]_36 chr11:46582380-46582460 1.46e-01 40_[+2(4.29e-05)]_32 chrX:40504144-40504224 2.22e-04 10_[+2(2.07e-05)]_41_[+3(8.60e-05)]_\ 13 chr20:3913502-3913582 5.48e-04 28_[+5(1.66e-05)]_10_[+1(2.34e-05)]_\ 26 chr8:10488029-10488109 1.69e-03 25_[+1(2.34e-05)]_47 chr1:222182602-222182682 1.70e-03 28_[+1(2.34e-05)]_44 chr13:28029633-28029713 3.71e-03 6_[+2(2.07e-05)]_66 chr6:33281833-33281913 2.78e-04 26_[+1(2.34e-05)]_13_[+4(5.60e-05)]_\ 25 chr7:26196073-26196153 4.80e-03 25_[+1(2.34e-05)]_47 chr21:37632933-37633013 1.24e-01 29_[+1(9.13e-05)]_43 chr7:21392619-21392699 4.90e-03 70_[+4(2.77e-05)]_2 chr11:57333761-57333841 1.53e-02 29_[+2(8.68e-05)]_43 chr1:118277819-118277899 6.85e-03 33_[+1(2.34e-05)]_39 chr8:90742285-90742365 2.52e-03 1_[+5(1.66e-05)]_24_[+2(4.29e-05)]_\ 39 chr3:121151145-121151225 1.93e-02 47_[+1(2.34e-05)]_25 chr1:46528409-46528489 2.29e-02 67_[+1(6.36e-05)]_5 chr4:185338477-185338557 1.64e-02 8_[+2(2.07e-05)]_64 chr11:14522054-14522134 1.23e-01 80 chr15:59274178-59274258 6.46e-03 53_[+1(2.34e-05)]_19 chr1:248070099-248070179 5.66e-04 21_[+2(2.07e-05)]_51 chr4:123745829-123745909 1.13e-03 41_[+3(9.97e-05)]_12_[+1(2.34e-05)]_\ 11 chr10:120891280-12089136 4.10e-02 40_[+2(2.07e-05)]_32 chr7:17182256-17182336 2.27e-02 31_[+1(2.34e-05)]_41 chr15:68406837-68406917 1.05e-02 55_[+1(2.34e-05)]_17 chr6:74364695-74364775 2.01e-03 13_[+2(2.07e-05)]_59 chr3:151911478-151911558 6.56e-02 80 chr6:32822319-32822399 5.84e-02 29_[+1(4.17e-05)]_43 chr1:59485972-59486052 7.05e-03 17_[+2(8.68e-05)]_19_[+3(5.76e-05)]_\ 28 chr9:80747718-80747798 2.98e-02 60_[+1(2.34e-05)]_12 chr19:47217866-47217946 5.02e-03 7_[+2(2.07e-05)]_56_[+3(5.76e-05)]_\ 1 chr6:133134269-133134349 2.86e-02 14_[+2(4.29e-05)]_16_[+2(4.29e-05)]_\ 10_[+2(4.29e-05)]_16 chr8:123931374-123931454 4.35e-02 46_[+1(2.34e-05)]_26 chr2:220252323-220252403 2.22e-02 44_[+1(4.17e-05)]_28 chr8:145060603-145060683 1.58e-03 8_[+3(3.31e-05)]_4_[+2(2.07e-05)]_\ 52 chr9:14992182-14992262 2.02e-01 80 chrX:154862259-154862339 5.47e-02 37_[+2(2.07e-05)]_35 chr14:24605368-24605448 2.45e-03 39_[+1(4.17e-05)]_33 chr12:42492028-42492108 5.76e-02 41_[+2(6.04e-05)]_20_[+2(8.68e-05)]_\ 3 chr2:191888232-191888312 1.37e-02 11_[+2(4.29e-05)]_61 chr11:20382355-20382435 2.63e-02 29_[+2(2.07e-05)]_9_[+2(2.07e-05)]_\ 26 chr4:78656242-78656322 2.22e-02 80 chr7:6145726-6145806 9.90e-03 10_[+1(2.34e-05)]_22_[+1(2.34e-05)]_\ [+5(8.38e-05)]_24 chr17:43304602-43304682 5.01e-02 12_[+2(2.07e-05)]_60 chr8:103299707-103299787 4.62e-01 80 chr9:110008700-110008780 7.65e-02 2_[+2(2.07e-05)]_70 chr22:36649079-36649159 2.43e-02 40_[+1(2.34e-05)]_32 chr6:25139152-25139232 2.07e-02 31_[+1(6.36e-05)]_41 chr9:102972435-102972515 2.02e-03 46_[+1(2.34e-05)]_26 chr12:50665837-50665917 3.36e-04 27_[+4(2.77e-05)]_5_[+1(2.34e-05)]_\ 32 chr22:36552965-36553045 2.49e-02 34_[+1(2.34e-05)]_38 chr18:74921000-74921080 5.11e-03 26_[+1(2.34e-05)]_2_[+5(6.42e-05)]_\ 36 chr1:36103098-36103178 1.28e-02 35_[+1(2.34e-05)]_5_[+1(9.13e-05)]_\ 24 chr7:92747357-92747437 4.19e-04 10_[+4(3.67e-05)]_43_[+1(6.36e-05)]_\ 11 chr7:120640143-120640223 9.81e-04 [+4(7.73e-05)]_72 chr6:119788761-119788841 5.57e-03 57_[+1(4.17e-05)]_15 chr20:61436142-61436222 2.29e-02 28_[+1(4.17e-05)]_44 chr12:10517693-10517773 1.10e-01 2_[+2(2.07e-05)]_70 chr3:128523206-128523286 1.53e-02 52_[+1(2.34e-05)]_20 chr17:41158755-41158835 2.48e-03 80 chr5:64778708-64778788 3.66e-03 25_[+1(2.34e-05)]_47 chr12:68856780-68856860 3.96e-01 80 chr10:3871221-3871301 2.01e-02 14_[+2(4.29e-05)]_58 chr1:145097857-145097937 1.01e-01 59_[+1(2.34e-05)]_13 chr9:96263669-96263749 4.16e-03 59_[+1(2.34e-05)]_13 chr11:4414872-4414952 2.94e-03 27_[+1(2.34e-05)]_45 chr2:85812952-85813032 6.54e-03 8_[+5(9.56e-05)]_13_[+1(2.34e-05)]_\ 43 chr11:5255920-5256000 4.25e-02 46_[+1(9.13e-05)]_26 chr7:12297391-12297471 7.58e-04 3_[+2(2.07e-05)]_69 chr16:11406624-11406704 1.88e-02 49_[+1(2.34e-05)]_23 chr4:82668454-82668534 6.26e-04 15_[+2(2.07e-05)]_57 chr1:212112177-212112257 2.78e-02 25_[+2(4.29e-05)]_4_[+2(2.07e-05)]_\ 35 chr3:183259651-183259731 2.66e-04 14_[+3(1.93e-05)]_58 chr1:228328993-228329073 3.35e-03 29_[+2(2.07e-05)]_43 chr2:196397883-196397963 3.91e-03 57_[+2(2.07e-05)]_15 chr1:230305614-230305694 2.51e-02 44_[+2(2.07e-05)]_28 chr9:108301874-108301954 6.84e-01 80 chr8:119933299-119933379 3.54e-02 66_[+1(2.34e-05)]_6 chr7:121081320-121081400 5.18e-04 47_[+1(2.34e-05)]_16_[+4(2.77e-05)]_\ 1 chr3:122283138-122283218 2.33e-04 41_[+2(4.29e-05)]_17_[+4(1.62e-05)]_\ 6 chr2:9971045-9971125 3.08e-04 63_[+1(6.36e-05)]_9 chr21:36901616-36901696 1.40e-03 23_[+5(1.66e-05)]_49 chr1:242108276-242108356 6.13e-02 26_[+1(2.34e-05)]_46 chr6:34625298-34625378 3.39e-03 23_[+2(4.29e-05)]_25_[+3(1.08e-05)]_\ 16 chr19:10196906-10196986 9.98e-06 7_[+4(1.62e-05)]_29_[+2(6.04e-05)]_\ 16_[+4(5.60e-05)]_4 chr10:115439588-11543966 2.71e-04 20_[+4(1.62e-05)]_30_[+1(4.17e-05)]_\ 14 chr6:27088839-27088919 8.31e-02 6_[+2(4.29e-05)]_66 chr14:21924334-21924414 6.34e-01 80 chr5:10596040-10596120 2.68e-02 32_[+2(2.07e-05)]_40 chr5:103425028-103425108 1.42e-02 20_[+4(4.75e-05)]_52 chr2:44308638-44308718 1.38e-02 44_[+1(2.34e-05)]_28 chr10:44090790-44090870 1.02e-01 51_[+1(9.13e-05)]_21 chr15:45004824-45004904 1.68e-02 80 chr12:14369452-14369532 3.60e-02 67_[+1(2.34e-05)]_5 chr16:53986496-53986576 1.81e-03 27_[+2(2.07e-05)]_32_[+3(6.85e-05)]_\ 5 chr7:112897361-112897441 9.83e-02 36_[+2(2.07e-05)]_36 chr16:68798973-68799053 1.76e-03 6_[+3(8.60e-05)]_32_[+1(2.34e-05)]_\ 26 chr10:91061688-91061768 2.61e-03 6_[+1(2.34e-05)]_5_[+1(2.34e-05)]_\ 53 chr10:91092182-91092262 9.17e-03 9_[+1(6.36e-05)]_35_[+1(2.34e-05)]_\ 20 chr15:80364751-80364831 2.60e-01 80 chr14:55799474-55799554 8.06e-03 26_[+1(2.34e-05)]_46 chr3:122399632-122399712 1.36e-01 25_[+2(6.04e-05)]_47 chr1:155607364-155607444 4.69e-02 20_[+2(2.07e-05)]_3_[+2(2.07e-05)]_\ 41 chr10:75677038-75677118 7.00e-03 32_[+1(2.34e-05)]_40 chr6:163881740-163881820 6.13e-02 50_[+1(2.34e-05)]_22 chr1:27998782-27998862 8.38e-03 26_[+1(9.13e-05)]_5_[+5(4.45e-05)]_\ 20_[+1(9.13e-05)]_5 chr17:57237706-57237786 2.36e-01 80 chr14:77428456-77428536 8.55e-03 17_[+5(6.42e-05)]_16_[+1(2.34e-05)]_\ 31 chr11:5646099-5646179 5.93e-03 41_[+1(2.34e-05)]_31 chr11:39392902-39392982 2.72e-02 38_[+1(2.34e-05)]_9_[+1(2.34e-05)]_\ 17 chrX:41190937-41191017 7.75e-02 21_[+2(4.29e-05)]_51 chr22:30443456-30443536 5.58e-02 4_[+2(4.29e-05)]_68 chr6:32811793-32811873 4.26e-04 26_[+2(6.04e-05)]_46 chr6:26440584-26440664 7.43e-04 44_[+1(2.34e-05)]_28 chr6:169252007-169252087 4.47e-04 10_[+2(2.07e-05)]_26_[+1(9.13e-05)]_\ 28 chr3:36949596-36949676 3.23e-03 26_[+1(2.34e-05)]_46 chr15:70820701-70820781 2.35e-03 39_[+2(2.07e-05)]_33 chr17:76976006-76976086 7.51e-01 80 chr21:17170040-17170120 1.70e-02 43_[+1(2.34e-05)]_7_[+1(6.36e-05)]_\ 14 chr12:34279270-34279350 5.30e-02 3_[+1(9.13e-05)]_17_[+1(2.34e-05)]_\ 44 chr6:27568801-27568881 3.56e-01 80 chr21:42792472-42792552 5.71e-03 14_[+3(8.60e-05)]_8_[+2(4.29e-05)]_\ 42 chr18:53144906-53144986 4.03e-02 35_[+1(2.34e-05)]_37 chr5:176727400-176727480 2.25e-04 11_[+4(9.06e-06)]_36_[+1(6.36e-05)]_\ 17 chr8:107738259-107738339 2.90e-01 80 chr4:185189246-185189326 7.34e-02 80 chr20:52271654-52271734 8.09e-03 80 chr1:199901285-199901365 3.36e-02 49_[+1(2.34e-05)]_23 chr10:91152238-91152318 8.90e-04 2_[+3(3.31e-05)]_15_[+1(2.34e-05)]_\ 47 chr4:77903888-77903968 2.04e-01 35_[+1(9.13e-05)]_37 chr17:48498917-48498997 9.51e-02 25_[+1(2.34e-05)]_47 chr6:26402346-26402426 2.95e-04 9_[+3(1.08e-05)]_30_[+1(6.36e-05)]_\ 25 chr2:171086395-171086475 2.31e-02 36_[+2(2.07e-05)]_36 chr4:159870392-159870472 7.20e-02 11_[+1(6.36e-05)]_38_[+1(2.34e-05)]_\ 15 chr11:114217490-11421757 1.40e-02 8_[+2(2.07e-05)]_64 chr12:127568013-12756809 7.81e-02 30_[+1(2.34e-05)]_42 chr14:58711924-58712004 3.33e-02 80 chr4:17387216-17387296 2.07e-02 20_[+2(2.07e-05)]_52 chr10:6019530-6019610 4.21e-02 34_[+1(4.17e-05)]_38 chr6:26365278-26365358 2.61e-04 48_[+1(6.36e-05)]_24 chr8:61993355-61993435 5.34e-02 80 chr12:24948807-24948887 1.87e-01 31_[+1(2.34e-05)]_41 chr22:36635607-36635687 8.96e-02 16_[+2(2.07e-05)]_56 chr10:7210530-7210610 5.04e-01 80 chr20:388898-388978 2.22e-03 46_[+1(2.34e-05)]_26 chr6:14075592-14075672 4.26e-02 32_[+1(2.34e-05)]_40 chr20:40247058-40247138 7.70e-01 80 chr1:114402286-114402366 4.37e-02 32_[+2(2.07e-05)]_40 chr8:121096954-121097034 4.61e-01 80 chr5:98369220-98369300 9.61e-02 3_[+2(8.68e-05)]_69 chr1:169278942-169279022 2.87e-02 80 chr11:61783218-61783298 1.34e-02 12_[+2(2.07e-05)]_60 chr2:152146417-152146497 2.12e-04 26_[+1(2.34e-05)]_34_[+3(9.97e-05)]_\ 4 chr9:101899698-101899778 1.50e-01 80 chr17:26135171-26135251 8.54e-02 31_[+1(6.36e-05)]_41 chr3:119813373-119813453 9.72e-01 80 chr22:18632785-18632865 4.76e-04 41_[+1(4.17e-05)]_31 chr2:20776557-20776637 4.08e-03 80 chr4:6753383-6753463 1.46e-01 80 chr2:166759584-166759664 3.03e-02 2_[+2(2.07e-05)]_70 chr6:18054021-18054101 1.57e-02 53_[+1(2.34e-05)]_19 chr8:71126851-71126931 1.66e-01 17_[+2(6.04e-05)]_55 chr17:56024342-56024422 2.53e-03 17_[+5(4.45e-05)]_45_[+2(2.07e-05)]_\ 2 chr12:83550799-83550879 3.19e-04 20_[+1(2.34e-05)]_52 chr19:49977426-49977506 1.14e-02 47_[+1(2.34e-05)]_25 chr3:196001660-196001740 1.18e-01 47_[+2(2.07e-05)]_25 chr3:197575130-197575210 2.00e-02 40_[+2(2.07e-05)]_32 chr17:80293088-80293168 2.80e-02 39_[+2(2.07e-05)]_33 chr7:100144515-100144595 8.98e-03 48_[+5(6.42e-05)]_24 chr7:150104150-150104230 2.98e-02 52_[+2(4.29e-05)]_20 chr4:8539072-8539152 6.24e-02 46_[+2(2.07e-05)]_26 chr2:20100011-20100091 7.02e-03 11_[+1(4.17e-05)]_61 chr14:91580936-91581016 8.58e-02 37_[+2(4.29e-05)]_35 chr7:16473379-16473459 3.29e-02 31_[+1(2.34e-05)]_41 chr7:142956039-142956119 8.01e-03 40_[+2(4.29e-05)]_14_[+1(9.13e-05)]_\ 10 chr3:142935715-142935795 1.78e-02 18_[+2(2.07e-05)]_54 chr8:73020421-73020501 1.62e-01 65_[+1(6.36e-05)]_7 chrX:119259496-119259576 2.30e-03 29_[+1(2.34e-05)]_43 chr9:126031140-126031220 8.80e-01 80 chr21:17104796-17104876 2.03e-02 39_[+2(2.07e-05)]_33 chr2:63671878-63671958 9.85e-03 80 chr2:152144792-152144872 6.48e-02 25_[+2(2.07e-05)]_47 chr7:107661128-107661208 2.25e-02 80 chr1:197701551-197701631 1.66e-03 37_[+2(2.07e-05)]_35 chr14:64010115-64010195 3.48e-01 80 chr12:64853545-64853625 5.43e-04 9_[+5(1.66e-05)]_47_[+1(2.34e-05)]_\ 8 chr1:205196950-205197030 1.01e-02 67_[+5(4.45e-05)]_5 chr1:78224860-78224940 4.44e-02 49_[+2(6.04e-05)]_23 chr3:40242404-40242484 4.08e-02 32_[+2(2.07e-05)]_40 chr17:7145803-7145883 9.71e-01 80 chr4:15655184-15655264 7.30e-03 80 chr4:169401661-169401741 2.51e-02 80 chr7:134832737-134832817 9.51e-02 34_[+2(2.07e-05)]_38 chr5:36419810-36419890 3.92e-03 10_[+3(3.31e-05)]_49_[+1(6.36e-05)]_\ 5 chr6:146070895-146070975 1.15e-02 5_[+5(1.66e-05)]_67 chr14:65565481-65565561 1.22e-02 58_[+1(2.34e-05)]_14 chr2:183954286-183954366 1.34e-03 46_[+2(2.07e-05)]_26 chr5:56111265-56111345 5.07e-01 80 chr19:3094295-3094375 6.67e-01 80 chr17:46386087-46386167 4.11e-02 80 chr5:138720912-138720992 1.76e-03 2_[+4(2.77e-05)]_26_[+2(4.29e-05)]_\ 36 chr3:9958753-9958833 1.88e-02 80 chr16:11334726-11334806 3.97e-03 47_[+1(6.36e-05)]_25 chr8:21777068-21777148 6.92e-01 80 chr6:32806533-32806613 4.60e-04 4_[+4(1.62e-05)]_19_[+1(4.17e-05)]_\ 41 chr17:46662924-46663004 6.47e-03 80 chr5:34695835-34695915 1.67e-05 44_[+2(2.07e-05)]_5_[+3(9.97e-05)]_\ 15 chr4:89300498-89300578 3.31e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************