******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ILK.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr22:23044831-23044911 1.0000 80 chr1:145042429-145042509 1.0000 80 chr9:99667339-99667419 1.0000 80 chr5:96078635-96078715 1.0000 80 chr2:75181806-75181886 1.0000 80 chr22:19485417-19485497 1.0000 80 chr1:145039148-145039228 1.0000 80 chr4:127916519-127916599 1.0000 80 chr1:84836677-84836757 1.0000 80 chr3:20362181-20362261 1.0000 80 chr18:1468741-1468821 1.0000 80 chr11:28192463-28192543 1.0000 80 chr3:5769917-5769997 1.0000 80 chr21:22571623-22571703 1.0000 80 chr1:144533353-144533433 1.0000 80 chr19:21795487-21795567 1.0000 80 chr12:76589869-76589949 1.0000 80 chr7:129847088-129847168 1.0000 80 chr4:172883363-172883443 1.0000 80 chr7:137899821-137899901 1.0000 80 chr17:14426280-14426360 1.0000 80 chr5:169127818-169127898 1.0000 80 chr22:22863577-22863657 1.0000 80 chr2:171106403-171106483 1.0000 80 chr2:171130917-171130997 1.0000 80 chr12:15077598-15077678 1.0000 80 chr6:28929371-28929451 1.0000 80 chrX:44002628-44002708 1.0000 80 chr22:22242624-22242704 1.0000 80 chr5:136028824-136028904 1.0000 80 chr5:57678030-57678110 1.0000 80 chr19:21880686-21880766 1.0000 80 chr17:46318152-46318232 1.0000 80 chr22:19263090-19263170 1.0000 80 chr1:16967939-16968019 1.0000 80 chr10:23329112-23329192 1.0000 80 chr10:17134371-17134451 1.0000 80 chr18:2164757-2164837 1.0000 80 chr13:93030454-93030534 1.0000 80 chr1:176189422-176189502 1.0000 80 chr7:105824539-105824619 1.0000 80 chr1:145058160-145058240 1.0000 80 chr7:106455394-106455474 1.0000 80 chr2:146611771-146611851 1.0000 80 chr1:144539351-144539431 1.0000 80 chr22:22833684-22833764 1.0000 80 chr1:110381686-110381766 1.0000 80 chr12:46945013-46945093 1.0000 80 chr1:183998170-183998250 1.0000 80 chr9:91336917-91336997 1.0000 80 chr5:107757614-107757694 1.0000 80 chr20:30986272-30986352 1.0000 80 chr10:5334116-5334196 1.0000 80 chr20:21637492-21637572 1.0000 80 chr22:19909677-19909757 1.0000 80 chr10:72502776-72502856 1.0000 80 chr7:158988793-158988873 1.0000 80 chr10:72413705-72413785 1.0000 80 chr1:142833235-142833315 1.0000 80 chr14:102154524-10215460 1.0000 80 chr13:93189821-93189901 1.0000 80 chr1:67526731-67526811 1.0000 80 chr11:118977162-11897724 1.0000 80 chr22:23102123-23102203 1.0000 80 chr11:63298728-63298808 1.0000 80 chr3:176065701-176065781 1.0000 80 chr22:22336318-22336398 1.0000 80 chr8:66717676-66717756 1.0000 80 chr22:22858166-22858246 1.0000 80 chr12:47667090-47667170 1.0000 80 chr6:14731713-14731793 1.0000 80 chr13:93131615-93131695 1.0000 80 chr22:25027216-25027296 1.0000 80 chr6:158762052-158762132 1.0000 80 chr6:15561855-15561935 1.0000 80 chr11:34691177-34691257 1.0000 80 chr22:22062100-22062180 1.0000 80 chr13:90964358-90964438 1.0000 80 chr1:103120733-103120813 1.0000 80 chr22:22692923-22693003 1.0000 80 chr6:79967397-79967477 1.0000 80 chr7:134048076-134048156 1.0000 80 chr12:46870072-46870152 1.0000 80 chr21:19062526-19062606 1.0000 80 chr1:185310686-185310766 1.0000 80 chr21:11079641-11079721 1.0000 80 chr22:23168110-23168190 1.0000 80 chr1:43079558-43079638 1.0000 80 chr22:23337406-23337486 1.0000 80 chr22:22162431-22162511 1.0000 80 chr11:125431953-12543203 1.0000 80 chr21:36920010-36920090 1.0000 80 chr18:874437-874517 1.0000 80 chr1:113395663-113395743 1.0000 80 chr11:34797215-34797295 1.0000 80 chr22:22714106-22714186 1.0000 80 chr19:21803972-21804052 1.0000 80 chr6:31781465-31781545 1.0000 80 chr1:16833480-16833560 1.0000 80 chr7:133767615-133767695 1.0000 80 chr6:30291132-30291212 1.0000 80 chr14:24409295-24409375 1.0000 80 chr7:124605788-124605868 1.0000 80 chr22:22805194-22805274 1.0000 80 chr6:138230954-138231034 1.0000 80 chr6:110809229-110809309 1.0000 80 chr1:16918099-16918179 1.0000 80 chr22:23878265-23878345 1.0000 80 chr1:168140086-168140166 1.0000 80 chr7:137908468-137908548 1.0000 80 chr1:231275367-231275447 1.0000 80 chr22:21454800-21454880 1.0000 80 chr12:46652055-46652135 1.0000 80 chrX:151298083-151298163 1.0000 80 chr11:34643571-34643651 1.0000 80 chr6:26034975-26035055 1.0000 80 chr2:171123227-171123307 1.0000 80 chrX:44244366-44244446 1.0000 80 chr1:114413105-114413185 1.0000 80 chr22:22711190-22711270 1.0000 80 chr1:68388872-68388952 1.0000 80 chr11:109946715-10994679 1.0000 80 chr3:101350907-101350987 1.0000 80 chr7:133880129-133880209 1.0000 80 chr6:145194162-145194242 1.0000 80 chr3:14293121-14293201 1.0000 80 chr4:76755695-76755775 1.0000 80 chr17:25435112-25435192 1.0000 80 chr6:147271413-147271493 1.0000 80 chr2:70483190-70483270 1.0000 80 chr5:173258497-173258577 1.0000 80 chr2:5780288-5780368 1.0000 80 chrX:2701029-2701109 1.0000 80 chr18:9021615-9021695 1.0000 80 chr22:20910493-20910573 1.0000 80 chr11:33967542-33967622 1.0000 80 chr22:23167109-23167189 1.0000 80 chr16:65798804-65798884 1.0000 80 chr22:21206846-21206926 1.0000 80 chr11:10752708-10752788 1.0000 80 chr2:91792549-91792629 1.0000 80 chr12:76698061-76698141 1.0000 80 chr4:100656053-100656133 1.0000 80 chr2:158122202-158122282 1.0000 80 chr6:49690206-49690286 1.0000 80 chr4:138889191-138889271 1.0000 80 chr5:39150222-39150302 1.0000 80 chr14:71320474-71320554 1.0000 80 chr7:27782182-27782262 1.0000 80 chr1:62332861-62332941 1.0000 80 chr1:33509252-33509332 1.0000 80 chr11:78002010-78002090 1.0000 80 chr21:30164102-30164182 1.0000 80 chr4:38319041-38319121 1.0000 80 chr7:13889229-13889309 1.0000 80 chr7:106437336-106437416 1.0000 80 chr6:34688091-34688171 1.0000 80 chr3:44479462-44479542 1.0000 80 chr7:22720649-22720729 1.0000 80 chr5:55452850-55452930 1.0000 80 chr3:112334360-112334440 1.0000 80 chr2:68639911-68639991 1.0000 80 chr1:119506058-119506138 1.0000 80 chr2:172435094-172435174 1.0000 80 chr2:70204706-70204786 1.0000 80 chr18:46488791-46488871 1.0000 80 chr7:84542415-84542495 1.0000 80 chr6:36852540-36852620 1.0000 80 chr11:3531001-3531081 1.0000 80 chr12:127646160-12764624 1.0000 80 chr6:22027266-22027346 1.0000 80 chr10:99177783-99177863 1.0000 80 chr4:48910188-48910268 1.0000 80 chr2:178087672-178087752 1.0000 80 chr13:25199567-25199647 1.0000 80 chr19:38807548-38807628 1.0000 80 chr10:63533963-63534043 1.0000 80 chr2:10416250-10416330 1.0000 80 chr6:150485215-150485295 1.0000 80 chr8:125461722-125461802 1.0000 80 chr3:46051567-46051647 1.0000 80 chr5:180900588-180900668 1.0000 80 chr22:22860353-22860433 1.0000 80 chr6:3055061-3055141 1.0000 80 chr10:104215030-10421511 1.0000 80 chr1:113444998-113445078 1.0000 80 chr6:31364693-31364773 1.0000 80 chr11:71423993-71424073 1.0000 80 chr2:98328882-98328962 1.0000 80 chr3:151393786-151393866 1.0000 80 chr22:21096135-21096215 1.0000 80 chr5:168007938-168008018 1.0000 80 chr19:35411087-35411167 1.0000 80 chr1:109634123-109634203 1.0000 80 chr1:31945395-31945475 1.0000 80 chr17:6851237-6851317 1.0000 80 chr17:76594424-76594504 1.0000 80 chr1:62432671-62432751 1.0000 80 chr1:246589053-246589133 1.0000 80 chr22:20926203-20926283 1.0000 80 chr6:147105951-147106031 1.0000 80 chr1:55417494-55417574 1.0000 80 chr1:145041345-145041425 1.0000 80 chr12:107427678-10742775 1.0000 80 chr10:26051002-26051082 1.0000 80 chr19:15936738-15936818 1.0000 80 chr5:95043451-95043531 1.0000 80 chr7:123139784-123139864 1.0000 80 chr20:25215321-25215401 1.0000 80 chr10:17605624-17605704 1.0000 80 chr15:34948409-34948489 1.0000 80 chr1:113360378-113360458 1.0000 80 chr11:86648391-86648471 1.0000 80 chr1:36482421-36482501 1.0000 80 chr22:20871406-20871486 1.0000 80 chr7:128540891-128540971 1.0000 80 chr6:134343876-134343956 1.0000 80 chr22:22902338-22902418 1.0000 80 chr2:68833998-68834078 1.0000 80 chr6:47384625-47384705 1.0000 80 chr22:21955579-21955659 1.0000 80 chr7:123633137-123633217 1.0000 80 chr2:205219426-205219506 1.0000 80 chr6:16044728-16044808 1.0000 80 chr5:68387013-68387093 1.0000 80 chr9:124150581-124150661 1.0000 80 chr15:57075533-57075613 1.0000 80 chr10:63523771-63523851 1.0000 80 chr7:16458973-16459053 1.0000 80 chr20:1182797-1182877 1.0000 80 chr6:134125501-134125581 1.0000 80 chr7:150019283-150019363 1.0000 80 chr1:55428814-55428894 1.0000 80 chr1:211884018-211884098 1.0000 80 chr21:11039127-11039207 1.0000 80 chr15:68193168-68193248 1.0000 80 chr20:45828631-45828711 1.0000 80 chr17:47154403-47154483 1.0000 80 chr6:15555419-15555499 1.0000 80 chr1:222135882-222135962 1.0000 80 chr6:137692560-137692640 1.0000 80 chr4:84309250-84309330 1.0000 80 chr21:45633770-45633850 1.0000 80 chr10:76006455-76006535 1.0000 80 chr22:22243946-22244026 1.0000 80 chr19:49385494-49385574 1.0000 80 chr1:92172251-92172331 1.0000 80 chr7:106485209-106485289 1.0000 80 chr4:36759730-36759810 1.0000 80 chr3:32090180-32090260 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ILK/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ILK.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.286 C 0.214 G 0.217 T 0.283 Background letter frequencies (from file dataset with add-one prior applied): A 0.286 C 0.214 G 0.217 T 0.283 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CTCCATYT MEME-1 width = 8 sites = 68 llr = 662 E-value = 2.2e-081 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::::a::: pos.-specific C a:aa::7: probability G :::::::: matrix T :a:::a3a bits 2.2 ** 2.0 * ** 1.8 * ** * 1.6 ****** * Relative 1.3 ****** * Entropy 1.1 ******** (14.0 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCCATCT consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:49385494-49385574 55 1.36e-05 acaggggcga ctccatct tgaacagggg chr21:45633770-45633850 16 1.36e-05 accagagtga ctccatct taaataggca chr20:45828631-45828711 56 1.36e-05 gccagacaga ctccatct tggctctttc chr1:211884018-211884098 61 1.36e-05 accagagcaa ctccatct taaataggag chr7:150019283-150019363 44 1.36e-05 gccagaatta ctccatct tgaataaggg chr20:1182797-1182877 53 1.36e-05 accagagtaa ctccatct tgaatagggg chr7:128540891-128540971 72 1.36e-05 accagagcaa ctccatct t chr11:86648391-86648471 42 1.36e-05 accagagcaa ctccatct tgagtagggg chr15:34948409-34948489 12 1.36e-05 accagagcaa ctccatct tgaacagggg chr7:123139784-123139864 49 1.36e-05 accagagcaa ctccatct tgaataggag chr12:107427678-10742775 68 1.36e-05 accagagtga ctccatct taaat chr5:168007938-168008018 21 1.36e-05 accagagcga ctccatct tgaataggga chr3:151393786-151393866 23 1.36e-05 acctaactaa ctccatct tgcttctagc chr11:71423993-71424073 45 1.36e-05 gccagacaga ctccatct tggctctttc chr3:112334360-112334440 50 1.36e-05 accaaagcaa ctccatct taaataggag chr4:38319041-38319121 49 1.36e-05 accagagcaa ctccatct tgaatagggg chr21:30164102-30164182 1 1.36e-05 . ctccatct tgaatagggg chr14:71320474-71320554 43 1.36e-05 accagagcaa ctccatct tgaataggag chr16:65798804-65798884 58 1.36e-05 accagagtga ctccatct tgaataggac chr3:101350907-101350987 44 1.36e-05 gccagataga ctccatct tggctccttc chrX:44244366-44244446 48 1.36e-05 accacagtga ctccatct tggaataggg chr1:113395663-113395743 37 1.36e-05 accagagcaa ctccatct tgaataggga chr21:19062526-19062606 58 1.36e-05 actagagtga ctccatct tgaatggggg chr1:103120733-103120813 19 1.36e-05 accagagcta ctccatct tgaataggtg chr6:15561855-15561935 55 1.36e-05 accacagcaa ctccatct tgaatagggg chr8:66717676-66717756 26 1.36e-05 gctaaggcaa ctccatct tggttgctaa chr20:21637492-21637572 60 1.36e-05 accagagcaa ctccatct tgagtgaggg chr2:146611771-146611851 41 1.36e-05 accagagtaa ctccatct tgaatagggg chr1:176189422-176189502 25 1.36e-05 accagagtaa ctccatct tgaatagggg chr18:2164757-2164837 37 1.36e-05 accagagcaa ctccatct tgaataagga chr10:17134371-17134451 12 1.36e-05 accagagcaa ctccatct tgaatagggg chr12:15077598-15077678 48 1.36e-05 gccagagcaa ctccatct tgaatagggg chr4:172883363-172883443 43 1.36e-05 acaagatcaa ctccatct tgaataaggg chr18:1468741-1468821 25 1.36e-05 acttaaccaa ctccatct tgcttctaac chr2:75181806-75181886 32 1.36e-05 accagagcaa ctccatct tgaataggag chr9:99667339-99667419 26 1.36e-05 gccagagcaa ctccatct tgaataggag chr3:32090180-32090260 28 3.16e-05 accagagcaa ctccattt tgaatagggg chr10:76006455-76006535 32 3.16e-05 gcatgggtga ctccattt tgatttttag chr4:84309250-84309330 38 3.16e-05 acatcagtga ctccattt tgactctgac chr6:137692560-137692640 57 3.16e-05 gcatgagtga ctccattt tggtttggtc chr1:222135882-222135962 62 3.16e-05 gcatgggtga ctccattt tgatttttag chr1:36482421-36482501 46 3.16e-05 gcatgagtga ctccattt tggtttggta chr19:35411087-35411167 61 3.16e-05 acataagaga ctccattt tgttctgtac chr1:113444998-113445078 55 3.16e-05 gcataagtga ctccattt taatttgttt chr6:3055061-3055141 39 3.16e-05 acataggaga ctccattt tgtgctgtac chr5:55452850-55452930 40 3.16e-05 acataagaga ctccattt tgttctgtac chr2:70483190-70483270 52 3.16e-05 acttgagtga ctccattt tggtttagtc chr4:76755695-76755775 50 3.16e-05 acgtgagtga ctccattt tggtttggtc chr1:68388872-68388952 65 3.16e-05 gcaagagtga ctccattt tgtttagg chr22:23878265-23878345 50 3.16e-05 acataagaga ctccattt tgttctgtac chr6:110809229-110809309 48 3.16e-05 accagaacaa ctccattt tgaataggag chr11:34797215-34797295 50 3.16e-05 ccttccctgg ctccattt tgccaggttt chr1:185310686-185310766 34 3.16e-05 gcatgagtga ctccattt tggtttggtc chr1:67526731-67526811 15 3.16e-05 ccttctctag ctccattt tgctagggtt chr10:23329112-23329192 27 3.16e-05 acagaagttc ctccattt tgtacctgca chr5:136028824-136028904 39 3.16e-05 tcattggtga ctccattt tgattctgaa chr7:137899821-137899901 60 3.16e-05 gcatgaatga ctccattt tggtttggtt chr15:57075533-57075613 28 4.53e-05 accagagcgc caccatct tgagcagggg chr1:33509252-33509332 69 4.53e-05 gcaggagtat caccatct tgga chr22:23167109-23167189 3 5.55e-05 gc ctccctct ggctgtggaa chr22:22692923-22693003 62 6.93e-05 cagcccaagt gtccatct aatggataaa chr5:57678030-57678110 16 6.93e-05 accagagtga gtccatct tgaatagcag chr6:22027266-22027346 26 1.00e-04 TCAAAAGAGA CTCCATCC TTTAGCTCCC chr2:68639911-68639991 27 1.00e-04 ACATTCTCTG CTCCAGCT CTCTGTTTCT chr17:14426280-14426360 1 1.00e-04 . CTCCACCt ccctaatcca chr5:68387013-68387093 62 1.18e-04 gtccaaactg caccattt tgtaagctcc chr7:106437336-106437416 64 1.32e-04 catttccccc ctcccttt tataagagc chr11:33967542-33967622 1 1.46e-04 . CTGCATCT TATCAGCTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:49385494-49385574 1.4e-05 54_[+1]_18 chr21:45633770-45633850 1.4e-05 15_[+1]_57 chr20:45828631-45828711 1.4e-05 55_[+1]_17 chr1:211884018-211884098 1.4e-05 60_[+1]_12 chr7:150019283-150019363 1.4e-05 43_[+1]_29 chr20:1182797-1182877 1.4e-05 52_[+1]_20 chr7:128540891-128540971 1.4e-05 71_[+1]_1 chr11:86648391-86648471 1.4e-05 41_[+1]_31 chr15:34948409-34948489 1.4e-05 11_[+1]_61 chr7:123139784-123139864 1.4e-05 48_[+1]_24 chr12:107427678-10742775 1.4e-05 67_[+1]_5 chr5:168007938-168008018 1.4e-05 20_[+1]_52 chr3:151393786-151393866 1.4e-05 22_[+1]_50 chr11:71423993-71424073 1.4e-05 44_[+1]_28 chr3:112334360-112334440 1.4e-05 49_[+1]_23 chr4:38319041-38319121 1.4e-05 48_[+1]_24 chr21:30164102-30164182 1.4e-05 [+1]_72 chr14:71320474-71320554 1.4e-05 42_[+1]_30 chr16:65798804-65798884 1.4e-05 57_[+1]_15 chr3:101350907-101350987 1.4e-05 43_[+1]_29 chrX:44244366-44244446 1.4e-05 47_[+1]_25 chr1:113395663-113395743 1.4e-05 36_[+1]_36 chr21:19062526-19062606 1.4e-05 57_[+1]_15 chr1:103120733-103120813 1.4e-05 18_[+1]_54 chr6:15561855-15561935 1.4e-05 54_[+1]_18 chr8:66717676-66717756 1.4e-05 25_[+1]_47 chr20:21637492-21637572 1.4e-05 59_[+1]_13 chr2:146611771-146611851 1.4e-05 40_[+1]_32 chr1:176189422-176189502 1.4e-05 24_[+1]_48 chr18:2164757-2164837 1.4e-05 36_[+1]_36 chr10:17134371-17134451 1.4e-05 11_[+1]_61 chr12:15077598-15077678 1.4e-05 47_[+1]_25 chr4:172883363-172883443 1.4e-05 42_[+1]_30 chr18:1468741-1468821 1.4e-05 24_[+1]_48 chr2:75181806-75181886 1.4e-05 31_[+1]_41 chr9:99667339-99667419 1.4e-05 25_[+1]_47 chr3:32090180-32090260 3.2e-05 27_[+1]_45 chr10:76006455-76006535 3.2e-05 31_[+1]_41 chr4:84309250-84309330 3.2e-05 37_[+1]_35 chr6:137692560-137692640 3.2e-05 56_[+1]_16 chr1:222135882-222135962 3.2e-05 61_[+1]_11 chr1:36482421-36482501 3.2e-05 45_[+1]_27 chr19:35411087-35411167 3.2e-05 60_[+1]_12 chr1:113444998-113445078 3.2e-05 54_[+1]_18 chr6:3055061-3055141 3.2e-05 38_[+1]_34 chr5:55452850-55452930 3.2e-05 39_[+1]_33 chr2:70483190-70483270 3.2e-05 51_[+1]_21 chr4:76755695-76755775 3.2e-05 49_[+1]_23 chr1:68388872-68388952 3.2e-05 64_[+1]_8 chr22:23878265-23878345 3.2e-05 49_[+1]_23 chr6:110809229-110809309 3.2e-05 47_[+1]_25 chr11:34797215-34797295 3.2e-05 49_[+1]_23 chr1:185310686-185310766 3.2e-05 33_[+1]_39 chr1:67526731-67526811 3.2e-05 14_[+1]_58 chr10:23329112-23329192 3.2e-05 26_[+1]_46 chr5:136028824-136028904 3.2e-05 38_[+1]_34 chr7:137899821-137899901 3.2e-05 59_[+1]_13 chr15:57075533-57075613 4.5e-05 27_[+1]_45 chr1:33509252-33509332 4.5e-05 68_[+1]_4 chr22:23167109-23167189 5.5e-05 2_[+1]_70 chr22:22692923-22693003 6.9e-05 61_[+1]_11 chr5:57678030-57678110 6.9e-05 15_[+1]_57 chr6:22027266-22027346 0.0001 25_[+1]_47 chr2:68639911-68639991 0.0001 26_[+1]_46 chr17:14426280-14426360 0.0001 [+1]_72 chr5:68387013-68387093 0.00012 61_[+1]_11 chr7:106437336-106437416 0.00013 63_[+1]_9 chr11:33967542-33967622 0.00015 [+1]_72 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCCATYT width=8 seqs=68 chr19:49385494-49385574 ( 55) CTCCATCT 1 chr21:45633770-45633850 ( 16) CTCCATCT 1 chr20:45828631-45828711 ( 56) CTCCATCT 1 chr1:211884018-211884098 ( 61) CTCCATCT 1 chr7:150019283-150019363 ( 44) CTCCATCT 1 chr20:1182797-1182877 ( 53) CTCCATCT 1 chr7:128540891-128540971 ( 72) CTCCATCT 1 chr11:86648391-86648471 ( 42) CTCCATCT 1 chr15:34948409-34948489 ( 12) CTCCATCT 1 chr7:123139784-123139864 ( 49) CTCCATCT 1 chr12:107427678-10742775 ( 68) CTCCATCT 1 chr5:168007938-168008018 ( 21) CTCCATCT 1 chr3:151393786-151393866 ( 23) CTCCATCT 1 chr11:71423993-71424073 ( 45) CTCCATCT 1 chr3:112334360-112334440 ( 50) CTCCATCT 1 chr4:38319041-38319121 ( 49) CTCCATCT 1 chr21:30164102-30164182 ( 1) CTCCATCT 1 chr14:71320474-71320554 ( 43) CTCCATCT 1 chr16:65798804-65798884 ( 58) CTCCATCT 1 chr3:101350907-101350987 ( 44) CTCCATCT 1 chrX:44244366-44244446 ( 48) CTCCATCT 1 chr1:113395663-113395743 ( 37) CTCCATCT 1 chr21:19062526-19062606 ( 58) CTCCATCT 1 chr1:103120733-103120813 ( 19) CTCCATCT 1 chr6:15561855-15561935 ( 55) CTCCATCT 1 chr8:66717676-66717756 ( 26) CTCCATCT 1 chr20:21637492-21637572 ( 60) CTCCATCT 1 chr2:146611771-146611851 ( 41) CTCCATCT 1 chr1:176189422-176189502 ( 25) CTCCATCT 1 chr18:2164757-2164837 ( 37) CTCCATCT 1 chr10:17134371-17134451 ( 12) CTCCATCT 1 chr12:15077598-15077678 ( 48) CTCCATCT 1 chr4:172883363-172883443 ( 43) CTCCATCT 1 chr18:1468741-1468821 ( 25) CTCCATCT 1 chr2:75181806-75181886 ( 32) CTCCATCT 1 chr9:99667339-99667419 ( 26) CTCCATCT 1 chr3:32090180-32090260 ( 28) CTCCATTT 1 chr10:76006455-76006535 ( 32) CTCCATTT 1 chr4:84309250-84309330 ( 38) CTCCATTT 1 chr6:137692560-137692640 ( 57) CTCCATTT 1 chr1:222135882-222135962 ( 62) CTCCATTT 1 chr1:36482421-36482501 ( 46) CTCCATTT 1 chr19:35411087-35411167 ( 61) CTCCATTT 1 chr1:113444998-113445078 ( 55) CTCCATTT 1 chr6:3055061-3055141 ( 39) CTCCATTT 1 chr5:55452850-55452930 ( 40) CTCCATTT 1 chr2:70483190-70483270 ( 52) CTCCATTT 1 chr4:76755695-76755775 ( 50) CTCCATTT 1 chr1:68388872-68388952 ( 65) CTCCATTT 1 chr22:23878265-23878345 ( 50) CTCCATTT 1 chr6:110809229-110809309 ( 48) CTCCATTT 1 chr11:34797215-34797295 ( 50) CTCCATTT 1 chr1:185310686-185310766 ( 34) CTCCATTT 1 chr1:67526731-67526811 ( 15) CTCCATTT 1 chr10:23329112-23329192 ( 27) CTCCATTT 1 chr5:136028824-136028904 ( 39) CTCCATTT 1 chr7:137899821-137899901 ( 60) CTCCATTT 1 chr15:57075533-57075613 ( 28) CACCATCT 1 chr1:33509252-33509332 ( 69) CACCATCT 1 chr22:23167109-23167189 ( 3) CTCCCTCT 1 chr22:22692923-22693003 ( 62) GTCCATCT 1 chr5:57678030-57678110 ( 16) GTCCATCT 1 chr6:22027266-22027346 ( 26) CTCCATCC 1 chr2:68639911-68639991 ( 27) CTCCAGCT 1 chr17:14426280-14426360 ( 1) CTCCACCT 1 chr5:68387013-68387093 ( 62) CACCATTT 1 chr7:106437336-106437416 ( 64) CTCCCTTT 1 chr11:33967542-33967622 ( 1) CTGCATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.85972 E= 2.2e-081 -1273 218 -288 -1273 -270 -1273 -1273 176 -1273 220 -388 -1273 -1273 222 -1273 -1273 176 -286 -1273 -1273 -1273 -386 -388 178 -1273 163 -1273 26 -1273 -386 -1273 180 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 68 E= 2.2e-081 0.000000 0.970588 0.029412 0.000000 0.044118 0.000000 0.000000 0.955882 0.000000 0.985294 0.014706 0.000000 0.000000 1.000000 0.000000 0.000000 0.970588 0.029412 0.000000 0.000000 0.000000 0.014706 0.014706 0.970588 0.000000 0.661765 0.000000 0.338235 0.000000 0.014706 0.000000 0.985294 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCCATYT MEME-1 regular expression -------------------------------------------------------------------------------- CTCCAT[CT]T -------------------------------------------------------------------------------- Time 4.98 secs. ******************************************************************************** ******************************************************************************** MOTIF ATGGAGTY MEME-2 width = 8 sites = 62 llr = 606 E-value = 5.1e-070 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 Description -------------------------------------------------------------------------------- Simplified A a:::a::: pos.-specific C :::::::6 probability G ::aa:a:: matrix T :a::::a3 bits 2.2 ** 2.0 ** * 1.8 **** * 1.6 ******* Relative 1.3 ******* Entropy 1.1 ******* (14.1 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel ATGGAGTC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:47154403-47154483 17 1.43e-05 cttattcaag atggagtc gctctggttc chr1:55428814-55428894 36 1.43e-05 ccaaacaaaa atggagtc acttgtgcta chr9:124150581-124150661 54 1.43e-05 cctattaaag atggagtc actctggctt chr7:123633137-123633217 46 1.43e-05 cctattcaag atggagtc actctggttc chr6:47384625-47384705 27 1.43e-05 caaaagcaag atggagtc agccatgtta chr6:134343876-134343956 50 1.43e-05 cacaaacaaa atggagtc aggagggcaa chr10:17605624-17605704 31 1.43e-05 gcaaaccaga atggagtc agtcatgcta chr20:25215321-25215401 50 1.43e-05 acagaacaaa atggagtc tcctatgtct chr5:95043451-95043531 18 1.43e-05 aagagccaag atggagtc tgtctggctc chr19:15936738-15936818 11 1.43e-05 acaaaccaaa atggagtc actcaggcta chr17:6851237-6851317 14 1.43e-05 ccaaaccaaa atggagtc actcatgcta chr2:98328882-98328962 10 1.43e-05 agagccaag atggagtc tgtctggctc chr8:125461722-125461802 17 1.43e-05 tttattcaag atggagtc actctggttt chr2:10416250-10416330 39 1.43e-05 gctattcaag atggagtc actctggttt chr10:99177783-99177863 21 1.43e-05 acaaaacaaa atggagtc tcctatgtct chr11:3531001-3531081 8 1.43e-05 agccaag atggagtc tgtctggctc chr6:36852540-36852620 21 1.43e-05 ccaaactaaa atggagtc actcatgcta chr2:172435094-172435174 28 1.43e-05 cctattcaag atggagtc gctctggttc chr3:44479462-44479542 9 1.43e-05 cactcaaa atggagtc gctctggttc chr6:34688091-34688171 43 1.43e-05 acagaacaaa atggagtc tcctatgtct chr5:39150222-39150302 28 1.43e-05 aaaaatcaaa atggagtc acccacgctc chr12:76698061-76698141 54 1.43e-05 acttttcaag atggagtc tgtttggttt chr3:14293121-14293201 24 1.43e-05 tagaagcaag atggagtc aattatgtca chr7:133880129-133880209 71 1.43e-05 tagaagcaag atggagtc ag chr6:30291132-30291212 25 1.43e-05 tagaagcaag atggagtc ggttacgtta chr5:107757614-107757694 6 1.43e-05 tcaag atggagtc actctggttc chr19:21880686-21880766 10 1.43e-05 ggaaataaa atggagtc tgtccggctc chr12:76589869-76589949 32 1.43e-05 cctattcaag atggagtc actctggttc chr3:5769917-5769997 16 1.43e-05 tagaagcaag atggagtc ggttaggtct chr11:28192463-28192543 29 1.43e-05 cctattcaag atggagtc gctgtggttc chr1:84836677-84836757 20 1.43e-05 cagaatcaaa atggagtc acttgtgtca chr4:127916519-127916599 35 1.43e-05 cagaatcaaa atggagtc acttatgttc chr4:36759730-36759810 43 3.33e-05 ccctatcaaa atggagtt gccatggttc chr7:106485209-106485289 43 3.33e-05 tagaaccaag atggagtt ggttatgtct chr15:68193168-68193248 33 3.33e-05 actattcaag atggagtt gctctggttc chr5:68387013-68387093 8 3.33e-05 attcaag atggagtt gccccggttc chr2:205219426-205219506 9 3.33e-05 tttctaag atggagtt acttatggca chr10:26051002-26051082 41 3.33e-05 cctattcaag atggagtt gctgtggttc chr13:25199567-25199647 34 3.33e-05 gcaaaccaaa atggagtt actcctgcca chr18:46488791-46488871 35 3.33e-05 cctattcaag atggagtt gctctggttc chr7:106437336-106437416 26 3.33e-05 tctattcaag atggagtt gctccagttc chr1:62332861-62332941 11 3.33e-05 gctattcaag atggagtt gctctggttc chr6:49690206-49690286 70 3.33e-05 cttatttaag atggagtt tct chr11:33967542-33967622 38 3.33e-05 GTAATCAAAC ATGGAGTT CAACAACTTT chrX:2701029-2701109 20 3.33e-05 tagaagcaag atggagtt ggttaggtct chr6:145194162-145194242 7 3.33e-05 ttcaag atggagtt gctctggttc chr12:46652055-46652135 44 3.33e-05 cctatttaag atggagtt gctctggttc chr7:124605788-124605868 20 3.33e-05 cctattcaag atggagtt gctgtggttc chr7:133767615-133767695 22 3.33e-05 cctattcaag atggagtt gctctggtaa chr18:874437-874517 20 3.33e-05 cctatttaag atggagtt gctctggttc chr11:125431953-12543203 41 3.33e-05 ccaaaccaaa atggagtt actcatgcta chr1:43079558-43079638 47 3.33e-05 cttattcaac atggagtt gctctggttc chr9:91336917-91336997 47 3.33e-05 tgtattcaag atggagtt gctctggttt chr17:76594424-76594504 31 4.41e-05 tagaagcaag atggggtc ggttaagtca chr6:31364693-31364773 55 4.41e-05 tggaagcaag atggggtc agttaggttt chr17:25435112-25435192 63 6.33e-05 taaaggcaag atggagta ggttaggtca chr7:137908468-137908548 41 6.33e-05 atgacacaat atggagta actcatgtta chr6:31781465-31781545 8 7.78e-05 caaatac atggagac gctactgtca chr22:19909677-19909757 24 7.78e-05 aaatcagtca atggagac tgacttggaa chr4:48910188-48910268 73 9.23e-05 cctattcaag atggagtg chr3:46051567-46051647 30 1.11e-04 tttattaaag atggaatc actctggtta chr3:176065701-176065781 46 1.11e-04 cctatccaag atggaatc actctggttc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:47154403-47154483 1.4e-05 16_[+2]_56 chr1:55428814-55428894 1.4e-05 35_[+2]_37 chr9:124150581-124150661 1.4e-05 53_[+2]_19 chr7:123633137-123633217 1.4e-05 45_[+2]_27 chr6:47384625-47384705 1.4e-05 26_[+2]_46 chr6:134343876-134343956 1.4e-05 49_[+2]_23 chr10:17605624-17605704 1.4e-05 30_[+2]_42 chr20:25215321-25215401 1.4e-05 49_[+2]_23 chr5:95043451-95043531 1.4e-05 17_[+2]_55 chr19:15936738-15936818 1.4e-05 10_[+2]_62 chr17:6851237-6851317 1.4e-05 13_[+2]_59 chr2:98328882-98328962 1.4e-05 9_[+2]_63 chr8:125461722-125461802 1.4e-05 16_[+2]_56 chr2:10416250-10416330 1.4e-05 38_[+2]_34 chr10:99177783-99177863 1.4e-05 20_[+2]_52 chr11:3531001-3531081 1.4e-05 7_[+2]_65 chr6:36852540-36852620 1.4e-05 20_[+2]_52 chr2:172435094-172435174 1.4e-05 27_[+2]_45 chr3:44479462-44479542 1.4e-05 8_[+2]_64 chr6:34688091-34688171 1.4e-05 42_[+2]_30 chr5:39150222-39150302 1.4e-05 27_[+2]_45 chr12:76698061-76698141 1.4e-05 53_[+2]_19 chr3:14293121-14293201 1.4e-05 23_[+2]_49 chr7:133880129-133880209 1.4e-05 70_[+2]_2 chr6:30291132-30291212 1.4e-05 24_[+2]_48 chr5:107757614-107757694 1.4e-05 5_[+2]_67 chr19:21880686-21880766 1.4e-05 9_[+2]_63 chr12:76589869-76589949 1.4e-05 31_[+2]_41 chr3:5769917-5769997 1.4e-05 15_[+2]_57 chr11:28192463-28192543 1.4e-05 28_[+2]_44 chr1:84836677-84836757 1.4e-05 19_[+2]_53 chr4:127916519-127916599 1.4e-05 34_[+2]_38 chr4:36759730-36759810 3.3e-05 42_[+2]_30 chr7:106485209-106485289 3.3e-05 42_[+2]_30 chr15:68193168-68193248 3.3e-05 32_[+2]_40 chr5:68387013-68387093 3.3e-05 7_[+2]_65 chr2:205219426-205219506 3.3e-05 8_[+2]_64 chr10:26051002-26051082 3.3e-05 40_[+2]_32 chr13:25199567-25199647 3.3e-05 33_[+2]_39 chr18:46488791-46488871 3.3e-05 34_[+2]_38 chr7:106437336-106437416 3.3e-05 25_[+2]_47 chr1:62332861-62332941 3.3e-05 10_[+2]_62 chr6:49690206-49690286 3.3e-05 69_[+2]_3 chr11:33967542-33967622 3.3e-05 37_[+2]_35 chrX:2701029-2701109 3.3e-05 19_[+2]_53 chr6:145194162-145194242 3.3e-05 6_[+2]_66 chr12:46652055-46652135 3.3e-05 43_[+2]_29 chr7:124605788-124605868 3.3e-05 19_[+2]_53 chr7:133767615-133767695 3.3e-05 21_[+2]_51 chr18:874437-874517 3.3e-05 19_[+2]_53 chr11:125431953-12543203 3.3e-05 40_[+2]_32 chr1:43079558-43079638 3.3e-05 46_[+2]_26 chr9:91336917-91336997 3.3e-05 46_[+2]_26 chr17:76594424-76594504 4.4e-05 30_[+2]_42 chr6:31364693-31364773 4.4e-05 54_[+2]_18 chr17:25435112-25435192 6.3e-05 62_[+2]_10 chr7:137908468-137908548 6.3e-05 40_[+2]_32 chr6:31781465-31781545 7.8e-05 7_[+2]_65 chr22:19909677-19909757 7.8e-05 23_[+2]_49 chr4:48910188-48910268 9.2e-05 72_[+2] chr3:46051567-46051647 0.00011 29_[+2]_43 chr3:176065701-176065781 0.00011 45_[+2]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGGAGTY width=8 seqs=62 chr17:47154403-47154483 ( 17) ATGGAGTC 1 chr1:55428814-55428894 ( 36) ATGGAGTC 1 chr9:124150581-124150661 ( 54) ATGGAGTC 1 chr7:123633137-123633217 ( 46) ATGGAGTC 1 chr6:47384625-47384705 ( 27) ATGGAGTC 1 chr6:134343876-134343956 ( 50) ATGGAGTC 1 chr10:17605624-17605704 ( 31) ATGGAGTC 1 chr20:25215321-25215401 ( 50) ATGGAGTC 1 chr5:95043451-95043531 ( 18) ATGGAGTC 1 chr19:15936738-15936818 ( 11) ATGGAGTC 1 chr17:6851237-6851317 ( 14) ATGGAGTC 1 chr2:98328882-98328962 ( 10) ATGGAGTC 1 chr8:125461722-125461802 ( 17) ATGGAGTC 1 chr2:10416250-10416330 ( 39) ATGGAGTC 1 chr10:99177783-99177863 ( 21) ATGGAGTC 1 chr11:3531001-3531081 ( 8) ATGGAGTC 1 chr6:36852540-36852620 ( 21) ATGGAGTC 1 chr2:172435094-172435174 ( 28) ATGGAGTC 1 chr3:44479462-44479542 ( 9) ATGGAGTC 1 chr6:34688091-34688171 ( 43) ATGGAGTC 1 chr5:39150222-39150302 ( 28) ATGGAGTC 1 chr12:76698061-76698141 ( 54) ATGGAGTC 1 chr3:14293121-14293201 ( 24) ATGGAGTC 1 chr7:133880129-133880209 ( 71) ATGGAGTC 1 chr6:30291132-30291212 ( 25) ATGGAGTC 1 chr5:107757614-107757694 ( 6) ATGGAGTC 1 chr19:21880686-21880766 ( 10) ATGGAGTC 1 chr12:76589869-76589949 ( 32) ATGGAGTC 1 chr3:5769917-5769997 ( 16) ATGGAGTC 1 chr11:28192463-28192543 ( 29) ATGGAGTC 1 chr1:84836677-84836757 ( 20) ATGGAGTC 1 chr4:127916519-127916599 ( 35) ATGGAGTC 1 chr4:36759730-36759810 ( 43) ATGGAGTT 1 chr7:106485209-106485289 ( 43) ATGGAGTT 1 chr15:68193168-68193248 ( 33) ATGGAGTT 1 chr5:68387013-68387093 ( 8) ATGGAGTT 1 chr2:205219426-205219506 ( 9) ATGGAGTT 1 chr10:26051002-26051082 ( 41) ATGGAGTT 1 chr13:25199567-25199647 ( 34) ATGGAGTT 1 chr18:46488791-46488871 ( 35) ATGGAGTT 1 chr7:106437336-106437416 ( 26) ATGGAGTT 1 chr1:62332861-62332941 ( 11) ATGGAGTT 1 chr6:49690206-49690286 ( 70) ATGGAGTT 1 chr11:33967542-33967622 ( 38) ATGGAGTT 1 chrX:2701029-2701109 ( 20) ATGGAGTT 1 chr6:145194162-145194242 ( 7) ATGGAGTT 1 chr12:46652055-46652135 ( 44) ATGGAGTT 1 chr7:124605788-124605868 ( 20) ATGGAGTT 1 chr7:133767615-133767695 ( 22) ATGGAGTT 1 chr18:874437-874517 ( 20) ATGGAGTT 1 chr11:125431953-12543203 ( 41) ATGGAGTT 1 chr1:43079558-43079638 ( 47) ATGGAGTT 1 chr9:91336917-91336997 ( 47) ATGGAGTT 1 chr17:76594424-76594504 ( 31) ATGGGGTC 1 chr6:31364693-31364773 ( 55) ATGGGGTC 1 chr17:25435112-25435192 ( 63) ATGGAGTA 1 chr7:137908468-137908548 ( 41) ATGGAGTA 1 chr6:31781465-31781545 ( 8) ATGGAGAC 1 chr22:19909677-19909757 ( 24) ATGGAGAC 1 chr4:48910188-48910268 ( 73) ATGGAGTG 1 chr3:46051567-46051647 ( 30) ATGGAATC 1 chr3:176065701-176065781 ( 46) ATGGAATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.90467 E= 5.1e-070 181 -1260 -1260 -1260 -1260 -1260 -1260 182 -1260 -1260 221 -1260 -1260 -1260 221 -1260 176 -1260 -275 -1260 -315 -1260 216 -1260 -315 -1260 -1260 177 -315 152 -374 26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 62 E= 5.1e-070 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.967742 0.000000 0.032258 0.000000 0.032258 0.000000 0.967742 0.000000 0.032258 0.000000 0.000000 0.967742 0.032258 0.612903 0.016129 0.338710 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGGAGTY MEME-2 regular expression -------------------------------------------------------------------------------- ATGGAGT[CT] -------------------------------------------------------------------------------- Time 8.62 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTCTGAC MEME-3 width = 8 sites = 37 llr = 350 E-value = 6.0e-024 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 2:::::9: pos.-specific C 89:a:::a probability G :::::a1: matrix T :19:9::: bits 2.2 * 2.0 * * * * 1.8 * * * * 1.6 ***** * Relative 1.3 ****** * Entropy 1.1 ******** (13.7 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCTCTGAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:36759730-36759810 66 1.04e-05 ggttcaaaca cctctgac ataatga chr5:68387013-68387093 31 1.04e-05 ggttcaaacg cctctgac aACAGTTCtg chr3:46051567-46051647 53 1.04e-05 ggttaggaca cctctgac CAAgatgcat chr8:125461722-125461802 40 1.04e-05 ggtttggact cctctgac aGCGGGAGTG chr3:44479462-44479542 32 1.04e-05 ggttcaaata cctctgac aCttttaccc chr1:62332861-62332941 34 1.04e-05 ggttccagca cctctgac ataaccactt chr4:100656053-100656133 21 1.04e-05 ggttcacaca cctctgac aGTGTTCTTC chr6:145194162-145194242 30 1.04e-05 ggttcacatg cctctgac aCAGATGAGA chr12:46652055-46652135 67 1.04e-05 ggttcacatg cctctgac agaagt chr7:124605788-124605868 43 1.04e-05 ggttcaaatg cctctgac aaaactatgt chr7:133767615-133767695 43 1.04e-05 ctggtaaagg cctctgac aAGGTCATGC chr18:874437-874517 43 1.04e-05 ggttcacatg cctctgac atttcccccc chr22:22162431-22162511 69 1.04e-05 gtatcaaatt cctctgac acag chr1:43079558-43079638 70 1.04e-05 ggttcaaatg cctctgac aCT chr6:79967397-79967477 13 1.04e-05 tggtcaaacg cctctgac atatttcacc chr3:176065701-176065781 69 1.04e-05 ggttcaaaca cctctgac aaat chr5:107757614-107757694 29 1.04e-05 ggttcaaatg cctctgac aCATGCATGC chr9:91336917-91336997 70 1.04e-05 ggtttaaatg cctctgac aGG chr12:76589869-76589949 55 1.04e-05 ggttcaaatg cctctgac agcttcatca chr10:26051002-26051082 64 1.83e-05 ggttcataca cctctggc atgatgaaa chr22:23167109-23167189 26 1.83e-05 tggaagcctc CCTCTGGC TGGGAGACTT chr4:84309250-84309330 48 3.23e-05 ctccattttg actctgac atctttcaca chr17:47154403-47154483 40 3.23e-05 ggttcaaaca actctgac aGTTAGATGG chr6:134125501-134125581 63 3.23e-05 CCCAAGGGCA ACTCTGAC CTTAGGTTGG chr4:127916519-127916599 56 3.23e-05 tatgttcaaa actctgac aaatagagct chr7:123633137-123633217 69 4.61e-05 ggttccaatg cttctgac aGCA chr10:5334116-5334196 7 4.61e-05 CCACAC CTTCTGAC CGGGAGTCtg chr1:31945395-31945475 34 6.99e-05 aaaagggaaa cccctgac aaacccatca chr2:10416250-10416330 62 6.99e-05 ggtttgaatg cctcggac aCTTTGACCT chr22:21206846-21206926 73 6.99e-05 CGTATACCCT CCGCTGAC chr1:145042429-145042509 5 8.02e-05 ttgt cctctgtc cctccagcca chr1:62432671-62432751 24 1.12e-04 cctgtctcat cctgtgac ttagaatgcc chr2:172435094-172435174 51 1.12e-04 ggttcaaaca cctcagac aAAAGCACTC chr11:28192463-28192543 52 1.12e-04 ggttcgaaca cctctgaG AAAACTAATC chrX:44002628-44002708 23 1.26e-04 agttcaaatg tctctgac actcctaagt chr9:124150581-124150661 62 1.36e-04 agatggagtc actctggc ttaaatgcct chr18:9021615-9021695 26 1.36e-04 AGAgtggtag actctggc aaagatggct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:36759730-36759810 1e-05 65_[+3]_7 chr5:68387013-68387093 1e-05 30_[+3]_42 chr3:46051567-46051647 1e-05 52_[+3]_20 chr8:125461722-125461802 1e-05 39_[+3]_33 chr3:44479462-44479542 1e-05 31_[+3]_41 chr1:62332861-62332941 1e-05 33_[+3]_39 chr4:100656053-100656133 1e-05 20_[+3]_52 chr6:145194162-145194242 1e-05 29_[+3]_43 chr12:46652055-46652135 1e-05 66_[+3]_6 chr7:124605788-124605868 1e-05 42_[+3]_30 chr7:133767615-133767695 1e-05 42_[+3]_30 chr18:874437-874517 1e-05 42_[+3]_30 chr22:22162431-22162511 1e-05 68_[+3]_4 chr1:43079558-43079638 1e-05 69_[+3]_3 chr6:79967397-79967477 1e-05 12_[+3]_60 chr3:176065701-176065781 1e-05 68_[+3]_4 chr5:107757614-107757694 1e-05 28_[+3]_44 chr9:91336917-91336997 1e-05 69_[+3]_3 chr12:76589869-76589949 1e-05 54_[+3]_18 chr10:26051002-26051082 1.8e-05 63_[+3]_9 chr22:23167109-23167189 1.8e-05 25_[+3]_47 chr4:84309250-84309330 3.2e-05 47_[+3]_25 chr17:47154403-47154483 3.2e-05 39_[+3]_33 chr6:134125501-134125581 3.2e-05 62_[+3]_10 chr4:127916519-127916599 3.2e-05 55_[+3]_17 chr7:123633137-123633217 4.6e-05 68_[+3]_4 chr10:5334116-5334196 4.6e-05 6_[+3]_66 chr1:31945395-31945475 7e-05 33_[+3]_39 chr2:10416250-10416330 7e-05 61_[+3]_11 chr22:21206846-21206926 7e-05 72_[+3] chr1:145042429-145042509 8e-05 4_[+3]_68 chr1:62432671-62432751 0.00011 23_[+3]_49 chr2:172435094-172435174 0.00011 50_[+3]_22 chr11:28192463-28192543 0.00011 51_[+3]_21 chrX:44002628-44002708 0.00013 22_[+3]_50 chr9:124150581-124150661 0.00014 61_[+3]_11 chr18:9021615-9021695 0.00014 25_[+3]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTCTGAC width=8 seqs=37 chr4:36759730-36759810 ( 66) CCTCTGAC 1 chr5:68387013-68387093 ( 31) CCTCTGAC 1 chr3:46051567-46051647 ( 53) CCTCTGAC 1 chr8:125461722-125461802 ( 40) CCTCTGAC 1 chr3:44479462-44479542 ( 32) CCTCTGAC 1 chr1:62332861-62332941 ( 34) CCTCTGAC 1 chr4:100656053-100656133 ( 21) CCTCTGAC 1 chr6:145194162-145194242 ( 30) CCTCTGAC 1 chr12:46652055-46652135 ( 67) CCTCTGAC 1 chr7:124605788-124605868 ( 43) CCTCTGAC 1 chr7:133767615-133767695 ( 43) CCTCTGAC 1 chr18:874437-874517 ( 43) CCTCTGAC 1 chr22:22162431-22162511 ( 69) CCTCTGAC 1 chr1:43079558-43079638 ( 70) CCTCTGAC 1 chr6:79967397-79967477 ( 13) CCTCTGAC 1 chr3:176065701-176065781 ( 69) CCTCTGAC 1 chr5:107757614-107757694 ( 29) CCTCTGAC 1 chr9:91336917-91336997 ( 70) CCTCTGAC 1 chr12:76589869-76589949 ( 55) CCTCTGAC 1 chr10:26051002-26051082 ( 64) CCTCTGGC 1 chr22:23167109-23167189 ( 26) CCTCTGGC 1 chr4:84309250-84309330 ( 48) ACTCTGAC 1 chr17:47154403-47154483 ( 40) ACTCTGAC 1 chr6:134125501-134125581 ( 63) ACTCTGAC 1 chr4:127916519-127916599 ( 56) ACTCTGAC 1 chr7:123633137-123633217 ( 69) CTTCTGAC 1 chr10:5334116-5334196 ( 7) CTTCTGAC 1 chr1:31945395-31945475 ( 34) CCCCTGAC 1 chr2:10416250-10416330 ( 62) CCTCGGAC 1 chr22:21206846-21206926 ( 73) CCGCTGAC 1 chr1:145042429-145042509 ( 5) CCTCTGTC 1 chr1:62432671-62432751 ( 24) CCTGTGAC 1 chr2:172435094-172435174 ( 51) CCTCAGAC 1 chr11:28192463-28192543 ( 52) CCTCTGAG 1 chrX:44002628-44002708 ( 23) TCTCTGAC 1 chr9:124150581-124150661 ( 62) ACTCTGGC 1 chr18:9021615-9021695 ( 26) ACTCTGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.81773 E= 6.0e-024 -82 192 -1185 -338 -1185 214 -1185 -239 -1185 -298 -300 174 -1185 218 -300 -1185 -340 -1185 -300 174 -1185 -1185 221 -1185 160 -1185 -100 -338 -1185 218 -300 -1185 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 37 E= 6.0e-024 0.162162 0.810811 0.000000 0.027027 0.000000 0.945946 0.000000 0.054054 0.000000 0.027027 0.027027 0.945946 0.000000 0.972973 0.027027 0.000000 0.027027 0.000000 0.027027 0.945946 0.000000 0.000000 1.000000 0.000000 0.864865 0.000000 0.108108 0.027027 0.000000 0.972973 0.027027 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-3 regular expression -------------------------------------------------------------------------------- CCTCTGAC -------------------------------------------------------------------------------- Time 12.25 secs. ******************************************************************************** ******************************************************************************** MOTIF AACCAGAG MEME-4 width = 8 sites = 33 llr = 326 E-value = 8.0e-024 ******************************************************************************** -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 Description -------------------------------------------------------------------------------- Simplified A a8::a:a1 pos.-specific C ::aa:1:: probability G :2:::9:9 matrix T :::::::: bits 2.2 * 2.0 ** 1.8 * ****** 1.6 * ****** Relative 1.3 * ****** Entropy 1.1 ******** (14.3 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AACCAGAG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:32090180-32090260 17 1.44e-05 gaggtgtttg aaccagag caactccatt chr21:45633770-45633850 5 1.44e-05 tttg aaccagag tgactccatc chr1:211884018-211884098 50 1.44e-05 ggggcatgtg aaccagag caactccatc chr20:1182797-1182877 42 1.44e-05 gtggcatttg aaccagag taactccatc chr15:57075533-57075613 17 1.44e-05 gaagcatttg aaccagag cgccaccatc chr7:128540891-128540971 61 1.44e-05 gaggcatttg aaccagag caactccatc chr11:86648391-86648471 31 1.44e-05 gaggcgtctg aaccagag caactccatc chr15:34948409-34948489 1 1.44e-05 . aaccagag caactccatc chr10:17605624-17605704 14 1.44e-05 agccccaaca aaccagag caaaccagaa chr7:123139784-123139864 38 1.44e-05 gaggcgtgtg aaccagag caactccatc chr12:107427678-10742775 57 1.44e-05 caggcatttg aaccagag tgactccatc chr4:38319041-38319121 38 1.44e-05 gaagcgtttg aaccagag caactccatc chr14:71320474-71320554 32 1.44e-05 gaggcatttg aaccagag caactccatc chr16:65798804-65798884 47 1.44e-05 gaggcatttg aaccagag tgactccatc chr1:113395663-113395743 26 1.44e-05 gaggcatttg aaccagag caactccatc chr1:103120733-103120813 8 1.44e-05 acgtttg aaccagag ctactccatc chr20:21637492-21637572 49 1.44e-05 gaggcatttg aaccagag caactccatc chr2:146611771-146611851 30 1.44e-05 gaggtgtttg aaccagag taactccatc chr1:176189422-176189502 14 1.44e-05 gaggcatttg aaccagag taactccatc chr18:2164757-2164837 26 1.44e-05 gaggcattta aaccagag caactccatc chr10:17134371-17134451 1 1.44e-05 . aaccagag caactccatc chr5:57678030-57678110 5 1.44e-05 tttg aaccagag tgagtccatc chr2:75181806-75181886 21 1.44e-05 aaggtgtgtg aaccagag caactccatc chr12:15077598-15077678 37 2.54e-05 gagatgtttg agccagag caactccatc chr9:99667339-99667419 15 2.54e-05 gaggcatttg agccagag caactccatc chrX:44244366-44244446 37 3.96e-05 gaggcatttg aaccacag tgactccatc chr6:15561855-15561935 44 3.96e-05 gaggtatttg aaccacag caactccatc chr6:110809229-110809309 37 5.86e-05 gaggtgtttg aaccagaa caactccatt chr1:145058160-145058240 54 5.86e-05 AAAAAATCAA AACCAGAA GGGTCTGGTG chr19:38807548-38807628 36 6.94e-05 tacagacatg agccacag tgcccggcct chr7:84542415-84542495 67 6.94e-05 aggcattcta agccacag gataag chr7:150019283-150019363 33 1.03e-04 gaggtgttta agccagaa ttactccatc chr22:21955579-21955659 43 1.37e-04 tttgtttttg agacagag tctctctcgt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:32090180-32090260 1.4e-05 16_[+4]_56 chr21:45633770-45633850 1.4e-05 4_[+4]_68 chr1:211884018-211884098 1.4e-05 49_[+4]_23 chr20:1182797-1182877 1.4e-05 41_[+4]_31 chr15:57075533-57075613 1.4e-05 16_[+4]_56 chr7:128540891-128540971 1.4e-05 60_[+4]_12 chr11:86648391-86648471 1.4e-05 30_[+4]_42 chr15:34948409-34948489 1.4e-05 [+4]_72 chr10:17605624-17605704 1.4e-05 13_[+4]_59 chr7:123139784-123139864 1.4e-05 37_[+4]_35 chr12:107427678-10742775 1.4e-05 56_[+4]_16 chr4:38319041-38319121 1.4e-05 37_[+4]_35 chr14:71320474-71320554 1.4e-05 31_[+4]_41 chr16:65798804-65798884 1.4e-05 46_[+4]_26 chr1:113395663-113395743 1.4e-05 25_[+4]_47 chr1:103120733-103120813 1.4e-05 7_[+4]_65 chr20:21637492-21637572 1.4e-05 48_[+4]_24 chr2:146611771-146611851 1.4e-05 29_[+4]_43 chr1:176189422-176189502 1.4e-05 13_[+4]_59 chr18:2164757-2164837 1.4e-05 25_[+4]_47 chr10:17134371-17134451 1.4e-05 [+4]_72 chr5:57678030-57678110 1.4e-05 4_[+4]_68 chr2:75181806-75181886 1.4e-05 20_[+4]_52 chr12:15077598-15077678 2.5e-05 36_[+4]_36 chr9:99667339-99667419 2.5e-05 14_[+4]_58 chrX:44244366-44244446 4e-05 36_[+4]_36 chr6:15561855-15561935 4e-05 43_[+4]_29 chr6:110809229-110809309 5.9e-05 36_[+4]_36 chr1:145058160-145058240 5.9e-05 53_[+4]_19 chr19:38807548-38807628 6.9e-05 35_[+4]_37 chr7:84542415-84542495 6.9e-05 66_[+4]_6 chr7:150019283-150019363 0.0001 32_[+4]_40 chr22:21955579-21955659 0.00014 42_[+4]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AACCAGAG width=8 seqs=33 chr3:32090180-32090260 ( 17) AACCAGAG 1 chr21:45633770-45633850 ( 5) AACCAGAG 1 chr1:211884018-211884098 ( 50) AACCAGAG 1 chr20:1182797-1182877 ( 42) AACCAGAG 1 chr15:57075533-57075613 ( 17) AACCAGAG 1 chr7:128540891-128540971 ( 61) AACCAGAG 1 chr11:86648391-86648471 ( 31) AACCAGAG 1 chr15:34948409-34948489 ( 1) AACCAGAG 1 chr10:17605624-17605704 ( 14) AACCAGAG 1 chr7:123139784-123139864 ( 38) AACCAGAG 1 chr12:107427678-10742775 ( 57) AACCAGAG 1 chr4:38319041-38319121 ( 38) AACCAGAG 1 chr14:71320474-71320554 ( 32) AACCAGAG 1 chr16:65798804-65798884 ( 47) AACCAGAG 1 chr1:113395663-113395743 ( 26) AACCAGAG 1 chr1:103120733-103120813 ( 8) AACCAGAG 1 chr20:21637492-21637572 ( 49) AACCAGAG 1 chr2:146611771-146611851 ( 30) AACCAGAG 1 chr1:176189422-176189502 ( 14) AACCAGAG 1 chr18:2164757-2164837 ( 26) AACCAGAG 1 chr10:17134371-17134451 ( 1) AACCAGAG 1 chr5:57678030-57678110 ( 5) AACCAGAG 1 chr2:75181806-75181886 ( 21) AACCAGAG 1 chr12:15077598-15077678 ( 37) AGCCAGAG 1 chr9:99667339-99667419 ( 15) AGCCAGAG 1 chrX:44244366-44244446 ( 37) AACCACAG 1 chr6:15561855-15561935 ( 44) AACCACAG 1 chr6:110809229-110809309 ( 37) AACCAGAA 1 chr1:145058160-145058240 ( 54) AACCAGAA 1 chr19:38807548-38807628 ( 36) AGCCACAG 1 chr7:84542415-84542495 ( 67) AGCCACAG 1 chr7:150019283-150019363 ( 33) AGCCAGAA 1 chr22:21955579-21955659 ( 43) AGACAGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.14407 E= 8.0e-024 181 -1169 -1169 -1169 152 -1169 -25 -1169 -324 218 -1169 -1169 -1169 222 -1169 -1169 181 -1169 -1169 -1169 -1169 -82 202 -1169 181 -1169 -1169 -1169 -165 -1169 207 -1169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 33 E= 8.0e-024 1.000000 0.000000 0.000000 0.000000 0.818182 0.000000 0.181818 0.000000 0.030303 0.969697 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.121212 0.878788 0.000000 1.000000 0.000000 0.000000 0.000000 0.090909 0.000000 0.909091 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-4 regular expression -------------------------------------------------------------------------------- AACCAGAG -------------------------------------------------------------------------------- Time 15.81 secs. ******************************************************************************** ******************************************************************************** MOTIF CTCTGGTT MEME-5 width = 8 sites = 27 llr = 275 E-value = 4.8e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C 9:9::::: probability G 1:1:a9:: matrix T :a:a:1aa bits 2.2 * 2.0 * 1.8 ***** ** 1.6 ******** Relative 1.3 ******** Entropy 1.1 ******** (14.7 bits) 0.9 ******** 0.7 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCTGGTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:47154403-47154483 26 1.38e-05 gatggagtcg ctctggtt caaacaactc chr15:68193168-68193248 42 1.38e-05 gatggagttg ctctggtt ccagtgcttc chr7:123633137-123633217 55 1.38e-05 gatggagtca ctctggtt ccaatgcttc chr3:46051567-46051647 39 1.38e-05 gatggaatca ctctggtt aggacacctc chr8:125461722-125461802 26 1.38e-05 gatggagtca ctctggtt tggactcctc chr2:10416250-10416330 48 1.38e-05 gatggagtca ctctggtt tgaatgcctc chr18:46488791-46488871 44 1.38e-05 gatggagttg ctctggtt caaactcctc chr2:172435094-172435174 37 1.38e-05 gatggagtcg ctctggtt caaacacctc chr3:44479462-44479542 18 1.38e-05 aatggagtcg ctctggtt caaatacctc chr1:62332861-62332941 20 1.38e-05 gatggagttg ctctggtt ccagcacctc chr6:145194162-145194242 16 1.38e-05 gatggagttg ctctggtt cacatgcctc chr12:46652055-46652135 53 1.38e-05 gatggagttg ctctggtt cacatgcctc chr18:874437-874517 29 1.38e-05 gatggagttg ctctggtt cacatgcctc chr1:43079558-43079638 56 1.38e-05 catggagttg ctctggtt caaatgcctc chr3:176065701-176065781 55 1.38e-05 gatggaatca ctctggtt caaacacctc chr7:158988793-158988873 25 1.38e-05 GGGCACTTTA CTCTGGTT AAATTCCAGA chr5:107757614-107757694 15 1.38e-05 gatggagtca ctctggtt caaatgcctc chr9:91336917-91336997 56 1.38e-05 gatggagttg ctctggtt taaatgcctc chr12:76589869-76589949 41 1.38e-05 gatggagtca ctctggtt caaatgcctc chr10:26051002-26051082 50 2.79e-05 gatggagttg ctgtggtt catacacctc chr7:124605788-124605868 29 2.79e-05 gatggagttg ctgtggtt caaatgcctc chr11:28192463-28192543 38 2.79e-05 gatggagtcg ctgtggtt cgaacacctc chr2:68639911-68639991 35 4.59e-05 TGCTCCAGCT CTCTGTTT CTCTTATTCT chr20:30986272-30986352 40 4.59e-05 caccagtctg ctctgttt ctgtggattt chr7:105824539-105824619 54 4.59e-05 ccttccttag ctctgttt gtcagggttt chr4:100656053-100656133 7 5.99e-05 gagtta gtctggtt cacacacctc chr10:5334116-5334196 20 5.99e-05 CTGACCGGGA GTCtggtt cgttaagact -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:47154403-47154483 1.4e-05 25_[+5]_47 chr15:68193168-68193248 1.4e-05 41_[+5]_31 chr7:123633137-123633217 1.4e-05 54_[+5]_18 chr3:46051567-46051647 1.4e-05 38_[+5]_34 chr8:125461722-125461802 1.4e-05 25_[+5]_47 chr2:10416250-10416330 1.4e-05 47_[+5]_25 chr18:46488791-46488871 1.4e-05 43_[+5]_29 chr2:172435094-172435174 1.4e-05 36_[+5]_36 chr3:44479462-44479542 1.4e-05 17_[+5]_55 chr1:62332861-62332941 1.4e-05 19_[+5]_53 chr6:145194162-145194242 1.4e-05 15_[+5]_57 chr12:46652055-46652135 1.4e-05 52_[+5]_20 chr18:874437-874517 1.4e-05 28_[+5]_44 chr1:43079558-43079638 1.4e-05 55_[+5]_17 chr3:176065701-176065781 1.4e-05 54_[+5]_18 chr7:158988793-158988873 1.4e-05 24_[+5]_48 chr5:107757614-107757694 1.4e-05 14_[+5]_58 chr9:91336917-91336997 1.4e-05 55_[+5]_17 chr12:76589869-76589949 1.4e-05 40_[+5]_32 chr10:26051002-26051082 2.8e-05 49_[+5]_23 chr7:124605788-124605868 2.8e-05 28_[+5]_44 chr11:28192463-28192543 2.8e-05 37_[+5]_35 chr2:68639911-68639991 4.6e-05 34_[+5]_38 chr20:30986272-30986352 4.6e-05 39_[+5]_33 chr7:105824539-105824619 4.6e-05 53_[+5]_19 chr4:100656053-100656133 6e-05 6_[+5]_66 chr10:5334116-5334196 6e-05 19_[+5]_53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTCTGGTT width=8 seqs=27 chr17:47154403-47154483 ( 26) CTCTGGTT 1 chr15:68193168-68193248 ( 42) CTCTGGTT 1 chr7:123633137-123633217 ( 55) CTCTGGTT 1 chr3:46051567-46051647 ( 39) CTCTGGTT 1 chr8:125461722-125461802 ( 26) CTCTGGTT 1 chr2:10416250-10416330 ( 48) CTCTGGTT 1 chr18:46488791-46488871 ( 44) CTCTGGTT 1 chr2:172435094-172435174 ( 37) CTCTGGTT 1 chr3:44479462-44479542 ( 18) CTCTGGTT 1 chr1:62332861-62332941 ( 20) CTCTGGTT 1 chr6:145194162-145194242 ( 16) CTCTGGTT 1 chr12:46652055-46652135 ( 53) CTCTGGTT 1 chr18:874437-874517 ( 29) CTCTGGTT 1 chr1:43079558-43079638 ( 56) CTCTGGTT 1 chr3:176065701-176065781 ( 55) CTCTGGTT 1 chr7:158988793-158988873 ( 25) CTCTGGTT 1 chr5:107757614-107757694 ( 15) CTCTGGTT 1 chr9:91336917-91336997 ( 56) CTCTGGTT 1 chr12:76589869-76589949 ( 41) CTCTGGTT 1 chr10:26051002-26051082 ( 50) CTGTGGTT 1 chr7:124605788-124605868 ( 29) CTGTGGTT 1 chr11:28192463-28192543 ( 38) CTGTGGTT 1 chr2:68639911-68639991 ( 35) CTCTGTTT 1 chr20:30986272-30986352 ( 40) CTCTGTTT 1 chr7:105824539-105824619 ( 54) CTCTGTTT 1 chr4:100656053-100656133 ( 7) GTCTGGTT 1 chr10:5334116-5334196 ( 20) GTCTGGTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.19896 E= 4.8e-020 -1140 211 -155 -1140 -1140 -1140 -1140 182 -1140 205 -96 -1140 -1140 -1140 -1140 182 -1140 -1140 221 -1140 -1140 -1140 204 -135 -1140 -1140 -1140 182 -1140 -1140 -1140 182 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 27 E= 4.8e-020 0.000000 0.925926 0.074074 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.888889 0.111111 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTCTGGTT MEME-5 regular expression -------------------------------------------------------------------------------- CTCTGGTT -------------------------------------------------------------------------------- Time 19.31 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:23044831-23044911 9.34e-02 80 chr1:145042429-145042509 6.21e-03 4_[+3(8.02e-05)]_68 chr9:99667339-99667419 7.59e-04 14_[+4(2.54e-05)]_3_[+1(1.36e-05)]_\ 47 chr5:96078635-96078715 3.84e-01 80 chr2:75181806-75181886 8.94e-04 20_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 41 chr22:19485417-19485497 3.64e-01 80 chr1:145039148-145039228 6.94e-01 80 chr4:127916519-127916599 7.87e-04 34_[+2(1.43e-05)]_13_[+3(3.23e-05)]_\ 17 chr1:84836677-84836757 1.15e-02 19_[+2(1.43e-05)]_53 chr3:20362181-20362261 9.23e-03 80 chr18:1468741-1468821 4.08e-02 24_[+1(1.36e-05)]_48 chr11:28192463-28192543 1.85e-05 28_[+2(1.43e-05)]_1_[+5(2.79e-05)]_\ 35 chr3:5769917-5769997 3.17e-03 15_[+2(1.43e-05)]_57 chr21:22571623-22571703 5.56e-01 80 chr1:144533353-144533433 6.94e-02 80 chr19:21795487-21795567 5.46e-01 80 chr12:76589869-76589949 1.22e-06 31_[+2(1.43e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_18 chr7:129847088-129847168 5.60e-01 80 chr4:172883363-172883443 2.83e-02 42_[+1(1.36e-05)]_30 chr7:137899821-137899901 2.83e-02 59_[+1(3.16e-05)]_13 chr17:14426280-14426360 4.29e-02 80 chr5:169127818-169127898 4.86e-01 80 chr22:22863577-22863657 4.30e-01 80 chr2:171106403-171106483 2.46e-01 80 chr2:171130917-171130997 5.96e-01 80 chr12:15077598-15077678 3.47e-04 36_[+4(2.54e-05)]_3_[+1(1.36e-05)]_\ 25 chr6:28929371-28929451 3.81e-01 80 chrX:44002628-44002708 3.04e-02 80 chr22:22242624-22242704 4.29e-01 80 chr5:136028824-136028904 2.70e-02 38_[+1(3.16e-05)]_34 chr5:57678030-57678110 3.31e-03 4_[+4(1.44e-05)]_3_[+1(6.93e-05)]_\ 57 chr19:21880686-21880766 1.31e-02 9_[+2(1.43e-05)]_63 chr17:46318152-46318232 5.27e-01 80 chr22:19263090-19263170 4.93e-01 80 chr1:16967939-16968019 4.95e-01 80 chr10:23329112-23329192 1.07e-02 26_[+1(3.16e-05)]_46 chr10:17134371-17134451 5.39e-04 [+4(1.44e-05)]_3_[+1(1.36e-05)]_61 chr18:2164757-2164837 1.18e-03 25_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 36 chr13:93030454-93030534 5.48e-01 80 chr1:176189422-176189502 1.34e-03 13_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 48 chr7:105824539-105824619 7.84e-02 53_[+5(4.59e-05)]_19 chr1:145058160-145058240 1.48e-02 53_[+4(5.86e-05)]_19 chr7:106455394-106455474 3.04e-01 80 chr2:146611771-146611851 3.60e-04 29_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 32 chr1:144539351-144539431 3.49e-01 80 chr22:22833684-22833764 7.85e-01 80 chr1:110381686-110381766 6.06e-02 80 chr12:46945013-46945093 6.81e-02 80 chr1:183998170-183998250 1.13e-01 80 chr9:91336917-91336997 5.61e-06 46_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_3 chr5:107757614-107757694 2.68e-06 5_[+2(1.43e-05)]_1_[+5(1.38e-05)]_6_\ [+3(1.04e-05)]_44 chr20:30986272-30986352 1.47e-03 39_[+5(4.59e-05)]_33 chr10:5334116-5334196 5.63e-04 6_[+3(4.61e-05)]_5_[+5(5.99e-05)]_\ 53 chr20:21637492-21637572 2.20e-04 48_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 13 chr22:19909677-19909757 2.68e-02 23_[+2(7.78e-05)]_49 chr10:72502776-72502856 9.68e-02 39_[+5(9.24e-05)]_33 chr7:158988793-158988873 1.70e-02 24_[+5(1.38e-05)]_48 chr10:72413705-72413785 1.41e-01 80 chr1:142833235-142833315 8.80e-01 80 chr14:102154524-10215460 4.92e-01 80 chr13:93189821-93189901 4.53e-01 80 chr1:67526731-67526811 2.26e-02 14_[+1(3.16e-05)]_58 chr11:118977162-11897724 5.43e-02 80 chr22:23102123-23102203 1.62e-01 80 chr11:63298728-63298808 4.06e-01 80 chr3:176065701-176065781 2.23e-05 54_[+5(1.38e-05)]_6_[+3(1.04e-05)]_\ 4 chr22:22336318-22336398 6.06e-01 80 chr8:66717676-66717756 9.04e-02 25_[+1(1.36e-05)]_47 chr22:22858166-22858246 2.30e-01 80 chr12:47667090-47667170 2.79e-02 80 chr6:14731713-14731793 1.14e-01 80 chr13:93131615-93131695 4.11e-01 80 chr22:25027216-25027296 9.13e-02 80 chr6:158762052-158762132 4.70e-01 80 chr6:15561855-15561935 7.84e-04 43_[+4(3.96e-05)]_3_[+1(1.36e-05)]_\ 18 chr11:34691177-34691257 1.63e-01 80 chr22:22062100-22062180 3.73e-01 80 chr13:90964358-90964438 1.69e-01 80 chr1:103120733-103120813 1.44e-03 7_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 54 chr22:22692923-22693003 6.58e-02 61_[+1(6.93e-05)]_11 chr6:79967397-79967477 2.92e-02 12_[+3(1.04e-05)]_60 chr7:134048076-134048156 7.09e-01 80 chr12:46870072-46870152 3.46e-01 80 chr21:19062526-19062606 3.22e-03 57_[+1(1.36e-05)]_15 chr1:185310686-185310766 1.33e-02 33_[+1(3.16e-05)]_39 chr21:11079641-11079721 8.94e-01 80 chr22:23168110-23168190 2.12e-01 80 chr1:43079558-43079638 7.17e-06 46_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_3 chr22:23337406-23337486 7.02e-01 80 chr22:22162431-22162511 3.36e-03 68_[+3(1.04e-05)]_4 chr11:125431953-12543203 3.27e-02 40_[+2(3.33e-05)]_32 chr21:36920010-36920090 1.01e-01 80 chr18:874437-874517 6.39e-06 19_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_30 chr1:113395663-113395743 3.85e-04 25_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 36 chr11:34797215-34797295 1.47e-02 49_[+1(3.16e-05)]_23 chr22:22714106-22714186 9.76e-01 80 chr19:21803972-21804052 5.49e-02 80 chr6:31781465-31781545 5.00e-02 7_[+2(7.78e-05)]_65 chr1:16833480-16833560 2.12e-01 80 chr7:133767615-133767695 4.00e-05 21_[+2(3.33e-05)]_13_[+3(1.04e-05)]_\ 30 chr6:30291132-30291212 8.32e-03 24_[+2(1.43e-05)]_48 chr14:24409295-24409375 7.49e-01 80 chr7:124605788-124605868 9.81e-06 19_[+2(3.33e-05)]_1_[+5(2.79e-05)]_\ 6_[+3(1.04e-05)]_30 chr22:22805194-22805274 6.71e-01 80 chr6:138230954-138231034 1.70e-01 80 chr6:110809229-110809309 5.92e-03 36_[+4(5.86e-05)]_3_[+1(3.16e-05)]_\ 25 chr1:16918099-16918179 4.53e-02 80 chr22:23878265-23878345 2.59e-03 49_[+1(3.16e-05)]_23 chr1:168140086-168140166 4.63e-01 80 chr7:137908468-137908548 1.00e-02 40_[+2(6.33e-05)]_32 chr1:231275367-231275447 8.23e-01 80 chr22:21454800-21454880 3.21e-02 80 chr12:46652055-46652135 2.42e-06 43_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_6 chrX:151298083-151298163 1.11e-01 80 chr11:34643571-34643651 2.23e-01 80 chr6:26034975-26035055 1.04e-01 80 chr2:171123227-171123307 5.53e-01 80 chrX:44244366-44244446 8.66e-04 36_[+4(3.96e-05)]_3_[+1(1.36e-05)]_\ 25 chr1:114413105-114413185 4.92e-02 80 chr22:22711190-22711270 3.74e-01 80 chr1:68388872-68388952 8.81e-03 64_[+1(3.16e-05)]_8 chr11:109946715-10994679 4.22e-01 80 chr3:101350907-101350987 7.51e-03 43_[+1(1.36e-05)]_29 chr7:133880129-133880209 1.33e-02 70_[+2(1.43e-05)]_2 chr6:145194162-145194242 2.31e-06 6_[+2(3.33e-05)]_1_[+5(1.38e-05)]_6_\ [+3(1.04e-05)]_43 chr3:14293121-14293201 4.00e-02 23_[+2(1.43e-05)]_49 chr4:76755695-76755775 3.97e-02 49_[+1(3.16e-05)]_23 chr17:25435112-25435192 2.58e-01 62_[+2(6.33e-05)]_10 chr6:147271413-147271493 1.75e-01 80 chr2:70483190-70483270 2.04e-02 51_[+1(3.16e-05)]_21 chr5:173258497-173258577 4.63e-01 80 chr2:5780288-5780368 9.68e-01 80 chrX:2701029-2701109 1.03e-02 19_[+2(3.33e-05)]_53 chr18:9021615-9021695 1.02e-02 80 chr22:20910493-20910573 8.90e-01 80 chr11:33967542-33967622 3.19e-03 37_[+2(3.33e-05)]_35 chr22:23167109-23167189 2.28e-04 5_[+3(1.83e-05)]_12_[+3(1.83e-05)]_\ 47 chr16:65798804-65798884 9.31e-04 46_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 15 chr22:21206846-21206926 1.55e-01 72_[+3(6.99e-05)] chr11:10752708-10752788 7.71e-01 80 chr2:91792549-91792629 6.62e-01 80 chr12:76698061-76698141 3.30e-03 53_[+2(1.43e-05)]_19 chr4:100656053-100656133 1.83e-03 6_[+5(5.99e-05)]_6_[+3(1.04e-05)]_\ 52 chr2:158122202-158122282 2.85e-01 80 chr6:49690206-49690286 4.18e-02 69_[+2(3.33e-05)]_3 chr4:138889191-138889271 2.95e-01 80 chr5:39150222-39150302 1.64e-02 27_[+2(1.43e-05)]_45 chr14:71320474-71320554 1.41e-03 31_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 30 chr7:27782182-27782262 1.75e-01 80 chr1:62332861-62332941 1.32e-06 10_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_39 chr1:33509252-33509332 9.61e-03 68_[+1(4.53e-05)]_4 chr11:78002010-78002090 2.75e-01 80 chr21:30164102-30164182 9.83e-03 [+1(1.36e-05)]_72 chr4:38319041-38319121 2.15e-04 37_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 24 chr7:13889229-13889309 6.82e-02 80 chr7:106437336-106437416 4.66e-03 25_[+2(3.33e-05)]_47 chr6:34688091-34688171 9.35e-03 42_[+2(1.43e-05)]_30 chr3:44479462-44479542 1.79e-06 8_[+2(1.43e-05)]_1_[+5(1.38e-05)]_6_\ [+3(1.04e-05)]_24_[+2(3.33e-05)]_9 chr7:22720649-22720729 5.30e-01 80 chr5:55452850-55452930 2.38e-03 39_[+1(3.16e-05)]_33 chr3:112334360-112334440 7.39e-03 49_[+1(1.36e-05)]_23 chr2:68639911-68639991 4.95e-03 34_[+5(4.59e-05)]_38 chr1:119506058-119506138 6.77e-02 80 chr2:172435094-172435174 5.31e-06 27_[+2(1.43e-05)]_1_[+5(1.38e-05)]_\ 36 chr2:70204706-70204786 4.11e-01 80 chr18:46488791-46488871 1.65e-04 34_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 29 chr7:84542415-84542495 1.20e-02 66_[+4(6.94e-05)]_6 chr6:36852540-36852620 7.94e-03 20_[+2(1.43e-05)]_52 chr11:3531001-3531081 8.36e-03 7_[+2(1.43e-05)]_65 chr12:127646160-12764624 8.09e-01 80 chr6:22027266-22027346 8.36e-02 80 chr10:99177783-99177863 3.20e-04 20_[+2(1.43e-05)]_52 chr4:48910188-48910268 3.67e-02 72_[+2(9.23e-05)] chr2:178087672-178087752 4.62e-01 80 chr13:25199567-25199647 2.78e-02 33_[+2(3.33e-05)]_39 chr19:38807548-38807628 1.18e-01 35_[+4(6.94e-05)]_37 chr10:63533963-63534043 2.53e-01 80 chr2:10416250-10416330 9.39e-06 38_[+2(1.43e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(6.99e-05)]_11 chr6:150485215-150485295 5.13e-01 80 chr8:125461722-125461802 6.27e-07 16_[+2(1.43e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(1.04e-05)]_33 chr3:46051567-46051647 3.27e-05 38_[+5(1.38e-05)]_6_[+3(1.04e-05)]_\ 20 chr5:180900588-180900668 5.79e-01 80 chr22:22860353-22860433 6.73e-01 80 chr6:3055061-3055141 3.69e-03 38_[+1(3.16e-05)]_34 chr10:104215030-10421511 3.67e-02 80 chr1:113444998-113445078 1.63e-01 54_[+1(3.16e-05)]_18 chr6:31364693-31364773 1.22e-01 54_[+2(4.41e-05)]_18 chr11:71423993-71424073 8.78e-03 44_[+1(1.36e-05)]_28 chr2:98328882-98328962 8.36e-03 9_[+2(1.43e-05)]_63 chr3:151393786-151393866 5.68e-02 22_[+1(1.36e-05)]_50 chr22:21096135-21096215 3.32e-01 80 chr5:168007938-168008018 6.99e-03 20_[+1(1.36e-05)]_52 chr19:35411087-35411167 1.68e-03 60_[+1(3.16e-05)]_12 chr1:109634123-109634203 6.53e-01 80 chr1:31945395-31945475 1.41e-01 33_[+3(6.99e-05)]_39 chr17:6851237-6851317 1.37e-02 13_[+2(1.43e-05)]_59 chr17:76594424-76594504 2.99e-02 30_[+2(4.41e-05)]_42 chr1:62432671-62432751 7.71e-02 80 chr1:246589053-246589133 9.41e-01 80 chr22:20926203-20926283 2.38e-02 80 chr6:147105951-147106031 8.51e-01 80 chr1:55417494-55417574 8.50e-01 80 chr1:145041345-145041425 2.50e-01 80 chr12:107427678-10742775 8.52e-04 56_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 5 chr10:26051002-26051082 5.51e-06 40_[+2(3.33e-05)]_1_[+5(2.79e-05)]_\ 6_[+3(1.83e-05)]_9 chr19:15936738-15936818 1.16e-03 10_[+2(1.43e-05)]_62 chr5:95043451-95043531 8.36e-03 17_[+2(1.43e-05)]_55 chr7:123139784-123139864 1.21e-03 37_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 24 chr20:25215321-25215401 9.35e-03 49_[+2(1.43e-05)]_23 chr10:17605624-17605704 1.16e-03 13_[+4(1.44e-05)]_9_[+2(1.43e-05)]_\ 42 chr15:34948409-34948489 1.20e-03 [+4(1.44e-05)]_3_[+1(1.36e-05)]_61 chr1:113360378-113360458 2.36e-01 80 chr11:86648391-86648471 3.28e-04 30_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 31 chr1:36482421-36482501 3.40e-02 45_[+1(3.16e-05)]_27 chr22:20871406-20871486 4.81e-01 80 chr7:128540891-128540971 4.87e-04 60_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 1 chr6:134343876-134343956 1.04e-02 18_[+2(1.43e-05)]_23_[+2(1.43e-05)]_\ 23 chr22:22902338-22902418 6.73e-02 80 chr2:68833998-68834078 3.58e-01 80 chr6:47384625-47384705 1.13e-02 26_[+2(1.43e-05)]_46 chr22:21955579-21955659 9.66e-03 80 chr7:123633137-123633217 7.51e-06 45_[+2(1.43e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(4.61e-05)]_4 chr2:205219426-205219506 8.96e-02 8_[+2(3.33e-05)]_64 chr6:16044728-16044808 3.97e-01 80 chr5:68387013-68387093 1.38e-05 7_[+2(3.33e-05)]_15_[+3(1.04e-05)]_\ 42 chr9:124150581-124150661 1.71e-04 53_[+2(1.43e-05)]_19 chr15:57075533-57075613 8.36e-04 16_[+4(1.44e-05)]_3_[+1(4.53e-05)]_\ 45 chr10:63523771-63523851 6.08e-02 80 chr7:16458973-16459053 4.68e-01 80 chr20:1182797-1182877 4.20e-04 41_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 20 chr6:134125501-134125581 2.56e-02 62_[+3(3.23e-05)]_10 chr7:150019283-150019363 2.14e-03 43_[+1(1.36e-05)]_29 chr1:55428814-55428894 8.81e-03 35_[+2(1.43e-05)]_37 chr1:211884018-211884098 2.89e-04 49_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 12 chr21:11039127-11039207 6.10e-01 80 chr15:68193168-68193248 6.25e-04 32_[+2(3.33e-05)]_1_[+5(1.38e-05)]_\ 31 chr20:45828631-45828711 8.78e-03 55_[+1(1.36e-05)]_17 chr17:47154403-47154483 2.83e-06 16_[+2(1.43e-05)]_1_[+5(1.38e-05)]_\ 6_[+3(3.23e-05)]_33 chr6:15555419-15555499 4.99e-01 80 chr1:222135882-222135962 3.43e-02 61_[+1(3.16e-05)]_11 chr6:137692560-137692640 3.11e-02 56_[+1(3.16e-05)]_16 chr4:84309250-84309330 1.31e-03 37_[+1(3.16e-05)]_2_[+3(3.23e-05)]_\ 25 chr21:45633770-45633850 3.10e-04 4_[+4(1.44e-05)]_3_[+1(1.36e-05)]_\ 57 chr10:76006455-76006535 2.56e-02 31_[+1(3.16e-05)]_41 chr22:22243946-22244026 1.96e-01 80 chr19:49385494-49385574 8.64e-02 12_[+1(1.36e-05)]_13_[+1(1.36e-05)]_\ 13_[+1(1.36e-05)]_18 chr1:92172251-92172331 1.33e-01 80 chr7:106485209-106485289 3.71e-02 42_[+2(3.33e-05)]_30 chr4:36759730-36759810 3.01e-04 42_[+2(3.33e-05)]_15_[+3(1.04e-05)]_\ 7 chr3:32090180-32090260 1.19e-03 16_[+4(1.44e-05)]_3_[+1(3.16e-05)]_\ 45 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************