******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ILF3.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:47277124-47277204 1.0000 80 chr1:46783173-46783253 1.0000 80 chr19:3975916-3975996 1.0000 80 chr12:49668358-49668438 1.0000 80 chr16:56975217-56975297 1.0000 80 chr17:57921740-57921820 1.0000 80 chr17:41153013-41153093 1.0000 80 chr3:195782274-195782354 1.0000 80 chr5:40829413-40829493 1.0000 80 chr17:72983820-72983900 1.0000 80 chr12:49667730-49667810 1.0000 80 chr1:149606040-149606120 1.0000 80 chr11:65837353-65837433 1.0000 80 chr11:61731740-61731820 1.0000 80 chr17:19091379-19091459 1.0000 80 chr3:195786280-195786360 1.0000 80 chr10:17280088-17280168 1.0000 80 chr1:17185458-17185538 1.0000 80 chr1:147994345-147994425 1.0000 80 chr12:54057603-54057683 1.0000 80 chr1:1285169-1285249 1.0000 80 chr6:68590290-68590370 1.0000 80 chr1:45234527-45234607 1.0000 80 chr2:178089055-178089135 1.0000 80 chr7:26252635-26252715 1.0000 80 chr1:24290535-24290615 1.0000 80 chr17:16286624-16286704 1.0000 80 chr2:201716602-201716682 1.0000 80 chr17:19015575-19015655 1.0000 80 chr7:26228254-26228334 1.0000 80 chr17:18967120-18967200 1.0000 80 chr14:21924692-21924772 1.0000 80 chr1:173830980-173831060 1.0000 80 chr5:137908239-137908319 1.0000 80 chr12:120634008-12063408 1.0000 80 chr1:173831644-173831724 1.0000 80 chr7:26227319-26227399 1.0000 80 chr1:36851379-36851459 1.0000 80 chr15:34781303-34781383 1.0000 80 chr11:9612012-9612092 1.0000 80 chr7:5565980-5566060 1.0000 80 chr10:79801007-79801087 1.0000 80 chr7:44843782-44843862 1.0000 80 chr3:23962720-23962800 1.0000 80 chr9:130208635-130208715 1.0000 80 chr17:76164715-76164795 1.0000 80 chr19:58906751-58906831 1.0000 80 chr10:103124620-10312470 1.0000 80 chr6:35439518-35439598 1.0000 80 chr1:36046905-36046985 1.0000 80 chr3:195775749-195775829 1.0000 80 chr11:62657131-62657211 1.0000 80 chr11:65272699-65272779 1.0000 80 chr12:46751470-46751550 1.0000 80 chr22:17138239-17138319 1.0000 80 chr6:111219573-111219653 1.0000 80 chr6:26031565-26031645 1.0000 80 chr1:109783076-109783156 1.0000 80 chr19:1259347-1259427 1.0000 80 chr1:142821932-142822012 1.0000 80 chr18:2572240-2572320 1.0000 80 chr19:49995917-49995997 1.0000 80 chr6:13711753-13711833 1.0000 80 chr1:46780640-46780720 1.0000 80 chr17:39848558-39848638 1.0000 80 chr16:21513652-21513732 1.0000 80 chr10:79801630-79801710 1.0000 80 chr15:45019390-45019470 1.0000 80 chr11:65273322-65273402 1.0000 80 chr1:28835009-28835089 1.0000 80 chr5:137802068-137802148 1.0000 80 chr1:35450734-35450814 1.0000 80 chr19:49118138-49118218 1.0000 80 chr11:65405603-65405683 1.0000 80 chr16:56975956-56976036 1.0000 80 chr7:155102624-155102704 1.0000 80 chr17:45191388-45191468 1.0000 80 chr20:37048590-37048670 1.0000 80 chr15:30114514-30114594 1.0000 80 chr7:128171019-128171099 1.0000 80 chr17:57920507-57920587 1.0000 80 chr11:66131419-66131499 1.0000 80 chr6:68589092-68589172 1.0000 80 chr1:145439437-145439517 1.0000 80 chr6:31600958-31601038 1.0000 80 chr8:91234324-91234404 1.0000 80 chr3:152880151-152880231 1.0000 80 chr16:31202564-31202644 1.0000 80 chr17:57921094-57921174 1.0000 80 chr3:177062708-177062788 1.0000 80 chr22:39919018-39919098 1.0000 80 chr22:19949929-19950009 1.0000 80 chr7:153106897-153106977 1.0000 80 chr1:28842485-28842565 1.0000 80 chr1:93427246-93427326 1.0000 80 chr2:128615538-128615618 1.0000 80 chr12:125395493-12539557 1.0000 80 chr9:139567583-139567663 1.0000 80 chr1:145443052-145443132 1.0000 80 chr20:29634213-29634293 1.0000 80 chr1:173832611-173832691 1.0000 80 chr14:35873868-35873948 1.0000 80 chr7:6500201-6500281 1.0000 80 chr6:28688425-28688505 1.0000 80 chr19:49379798-49379878 1.0000 80 chr2:27286014-27286094 1.0000 80 chr12:54679446-54679526 1.0000 80 chr17:44270589-44270669 1.0000 80 chr1:149514117-149514197 1.0000 80 chr9:129622716-129622796 1.0000 80 chr1:6685347-6685427 1.0000 80 chr18:47013855-47013935 1.0000 80 chr12:9904636-9904716 1.0000 80 chr9:131314911-131314991 1.0000 80 chr5:180900605-180900685 1.0000 80 chr1:8924890-8924970 1.0000 80 chr7:99516777-99516857 1.0000 80 chr7:5568415-5568495 1.0000 80 chr19:10223055-10223135 1.0000 80 chr7:32997100-32997180 1.0000 80 chr3:194991674-194991754 1.0000 80 chr2:183903148-183903228 1.0000 80 chr5:176871747-176871827 1.0000 80 chr11:34073085-34073165 1.0000 80 chr2:97778854-97778934 1.0000 80 chr17:46702694-46702774 1.0000 80 chr5:137804785-137804865 1.0000 80 chr6:41754284-41754364 1.0000 80 chr10:23344459-23344539 1.0000 80 chr22:23308895-23308975 1.0000 80 chr17:62494947-62495027 1.0000 80 chr1:35653726-35653806 1.0000 80 chr19:10223960-10224040 1.0000 80 chr16:56979431-56979511 1.0000 80 chr17:62493567-62493647 1.0000 80 chr1:35734526-35734606 1.0000 80 chr1:204381466-204381546 1.0000 80 chr15:49268057-49268137 1.0000 80 chr18:9102766-9102846 1.0000 80 chr11:65272065-65272145 1.0000 80 chr12:49521178-49521258 1.0000 80 chr12:24897026-24897106 1.0000 80 chr10:27149353-27149433 1.0000 80 chr6:18264610-18264690 1.0000 80 chr19:50887111-50887191 1.0000 80 chr17:8130420-8130500 1.0000 80 chr1:16160510-16160590 1.0000 80 chr21:47706713-47706793 1.0000 80 chr10:70746504-70746584 1.0000 80 chr19:11243570-11243650 1.0000 80 chr7:94139394-94139474 1.0000 80 chr1:235416731-235416811 1.0000 80 chr11:44117327-44117407 1.0000 80 chr21:34960821-34960901 1.0000 80 chr5:39165114-39165194 1.0000 80 chr5:32312915-32312995 1.0000 80 chr1:207223404-207223484 1.0000 80 chr4:29459-29539 1.0000 80 chr6:30582247-30582327 1.0000 80 chr17:56065920-56066000 1.0000 80 chr15:75052738-75052818 1.0000 80 chr19:18942865-18942945 1.0000 80 chr17:40021678-40021758 1.0000 80 chr14:50049400-50049480 1.0000 80 chr5:140699949-140700029 1.0000 80 chr1:148604877-148604957 1.0000 80 chr19:7991308-7991388 1.0000 80 chr1:145444137-145444217 1.0000 80 chr19:49471045-49471125 1.0000 80 chr9:136150521-136150601 1.0000 80 chr1:47848204-47848284 1.0000 80 chr6:74224077-74224157 1.0000 80 chr6:13574485-13574565 1.0000 80 chr22:35653604-35653684 1.0000 80 chr16:2011281-2011361 1.0000 80 chr9:102581331-102581411 1.0000 80 chr3:186508303-186508383 1.0000 80 chr17:27224551-27224631 1.0000 80 chr17:41438519-41438599 1.0000 80 chr2:243153845-243153925 1.0000 80 chr2:30884349-30884429 1.0000 80 chr19:1273449-1273529 1.0000 80 chr1:39492313-39492393 1.0000 80 chr6:138725434-138725514 1.0000 80 chr6:30583546-30583626 1.0000 80 chr2:130939818-130939898 1.0000 80 chr7:130757301-130757381 1.0000 80 chr12:122240123-12224020 1.0000 80 chr1:150545693-150545773 1.0000 80 chr17:78075262-78075342 1.0000 80 chr7:151216532-151216612 1.0000 80 chr17:7137828-7137908 1.0000 80 chr7:44887438-44887518 1.0000 80 chr11:82871038-82871118 1.0000 80 chr22:18120825-18120905 1.0000 80 chr1:218477771-218477851 1.0000 80 chr1:145589365-145589445 1.0000 80 chr22:17652608-17652688 1.0000 80 chr16:2203718-2203798 1.0000 80 chr17:74732661-74732741 1.0000 80 chr11:113644803-11364488 1.0000 80 chr3:195787845-195787925 1.0000 80 chr19:49469447-49469527 1.0000 80 chr10:76992111-76992191 1.0000 80 chr1:228270455-228270535 1.0000 80 chr1:33430288-33430368 1.0000 80 chr6:20405079-20405159 1.0000 80 chr6:15211557-15211637 1.0000 80 chr22:19279041-19279121 1.0000 80 chr6:27486772-27486852 1.0000 80 chr6:28188647-28188727 1.0000 80 chr7:139875539-139875619 1.0000 80 chr1:149215040-149215120 1.0000 80 chr1:29070793-29070873 1.0000 80 chr6:26205514-26205594 1.0000 80 chr7:99689452-99689532 1.0000 80 chr16:4484523-4484603 1.0000 80 chr11:65266915-65266995 1.0000 80 chr6:26701776-26701856 1.0000 80 chr7:128049853-128049933 1.0000 80 chr12:50419715-50419795 1.0000 80 chr12:121148380-12114846 1.0000 80 chr22:22776982-22777062 1.0000 80 chr16:22309809-22309889 1.0000 80 chr5:137805332-137805412 1.0000 80 chr9:136196394-136196474 1.0000 80 chr1:149858542-149858622 1.0000 80 chr5:139927352-139927432 1.0000 80 chr11:86748123-86748203 1.0000 80 chr1:212458897-212458977 1.0000 80 chr16:11836532-11836612 1.0000 80 chr6:3118344-3118424 1.0000 80 chr6:13989979-13990059 1.0000 80 chr5:95064963-95065043 1.0000 80 chr1:46078157-46078237 1.0000 80 chr19:5309178-5309258 1.0000 80 chr2:85772826-85772906 1.0000 80 chr2:24307396-24307476 1.0000 80 chr19:680263-680343 1.0000 80 chr4:186130746-186130826 1.0000 80 chr9:131464934-131465014 1.0000 80 chr6:26286679-26286759 1.0000 80 chr2:178093000-178093080 1.0000 80 chr22:19385089-19385169 1.0000 80 chr7:140624349-140624429 1.0000 80 chr17:73772764-73772844 1.0000 80 chr16:69345257-69345337 1.0000 80 chr16:20751834-20751914 1.0000 80 chr6:64345663-64345743 1.0000 80 chr11:62380019-62380099 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ILF3/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ILF3.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.231 C 0.272 G 0.272 T 0.225 Background letter frequencies (from file dataset with add-one prior applied): A 0.231 C 0.272 G 0.272 T 0.225 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF YGGGAGGC MEME-1 width = 8 sites = 23 llr = 205 E-value = 1.8e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 Description -------------------------------------------------------------------------------- Simplified A :3::a::: pos.-specific C 4::::::a probability G 27aa:aa: matrix T 3::::::: bits 2.2 * 1.9 ****** 1.7 ****** 1.5 ****** Relative 1.3 ****** Entropy 1.1 ******* (12.9 bits) 0.9 ******* 0.6 ******* 0.4 ******* 0.2 ******** 0.0 -------- Multilevel CGGGAGGC consensus TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:78075262-78075342 29 4.65e-05 GGCGCCTGCG CGGGAGGC CGCGTCACGT chr11:44117327-44117407 55 4.65e-05 CGGGGCCGAG CGGGAGGC AGCCGTGGCC chr19:11243570-11243650 57 4.65e-05 cccagcactt tgggaggc tgagctggat chr10:70746504-70746584 73 4.65e-05 cacagtactt tgggaggc chr6:18264610-18264690 56 4.65e-05 GAGGAGGTTC TGGGAGGC GGCGGCGGCC chr6:41754284-41754364 36 4.65e-05 CTCCCAGGCG CGGGAGGC GGACGCCCTC chr5:176871747-176871827 27 4.65e-05 tggctgagca tgggaggc caggggtgga chr1:6685347-6685427 30 4.65e-05 CCCGGGGGCG CGGGAGGC CCAGACCCGG chr17:57921094-57921174 37 4.65e-05 cccagcactt tgggaggc caaggtgggc chr11:65405603-65405683 71 4.65e-05 gagcagggga cgggagGC AC chr17:39848558-39848638 63 4.65e-05 AGTTAAGTGT TGGGAGGC CATCCCTTAT chr17:57921740-57921820 52 4.65e-05 cccagccttt tgggaggc caagacagga chr14:50049400-50049480 25 8.60e-05 tacaccaatt caggaggc acagggtata chr2:97778854-97778934 1 8.60e-05 . CAGGAGGC CATCCCACGG chr11:34073085-34073165 7 8.60e-05 TGCGTC CAGGAGGC GCCCCACAGC chr14:21924692-21924772 32 8.60e-05 TGTATACACT TAGGAGGC CCCTCAGTCA chr17:18967120-18967200 5 8.60e-05 GAAA CAGGAGGC GAAAACCTTT chr17:19015575-19015655 50 8.60e-05 ACCGCTGAAA CAGGAGGC GAAAACCTTT chr21:34960821-34960901 23 1.11e-04 CTCACGGGGC GGGGAGGC GGCAGCTCCA chr1:93427246-93427326 54 1.11e-04 GGAGCTTAAA GGGGAGGC GCGCGGAGGC chr10:79801630-79801710 30 1.11e-04 GTCACGAAGT GGGGAGGC TTTTCTGTTC chr7:153106897-153106977 23 1.33e-04 tgccactaag gaggaggc taaggagatg chr9:131464934-131465014 29 1.55e-04 TTTGGATCCG AGGGAGGC GCTGGGGCGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:78075262-78075342 4.6e-05 28_[+1]_44 chr11:44117327-44117407 4.6e-05 54_[+1]_18 chr19:11243570-11243650 4.6e-05 56_[+1]_16 chr10:70746504-70746584 4.6e-05 72_[+1] chr6:18264610-18264690 4.6e-05 55_[+1]_17 chr6:41754284-41754364 4.6e-05 35_[+1]_37 chr5:176871747-176871827 4.6e-05 26_[+1]_46 chr1:6685347-6685427 4.6e-05 29_[+1]_43 chr17:57921094-57921174 4.6e-05 36_[+1]_36 chr11:65405603-65405683 4.6e-05 70_[+1]_2 chr17:39848558-39848638 4.6e-05 62_[+1]_10 chr17:57921740-57921820 4.6e-05 51_[+1]_21 chr14:50049400-50049480 8.6e-05 24_[+1]_48 chr2:97778854-97778934 8.6e-05 [+1]_72 chr11:34073085-34073165 8.6e-05 6_[+1]_66 chr14:21924692-21924772 8.6e-05 31_[+1]_41 chr17:18967120-18967200 8.6e-05 4_[+1]_68 chr17:19015575-19015655 8.6e-05 49_[+1]_23 chr21:34960821-34960901 0.00011 22_[+1]_50 chr1:93427246-93427326 0.00011 53_[+1]_19 chr10:79801630-79801710 0.00011 29_[+1]_43 chr7:153106897-153106977 0.00013 22_[+1]_50 chr9:131464934-131465014 0.00015 28_[+1]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YGGGAGGC width=8 seqs=23 chr17:78075262-78075342 ( 29) CGGGAGGC 1 chr11:44117327-44117407 ( 55) CGGGAGGC 1 chr19:11243570-11243650 ( 57) TGGGAGGC 1 chr10:70746504-70746584 ( 73) TGGGAGGC 1 chr6:18264610-18264690 ( 56) TGGGAGGC 1 chr6:41754284-41754364 ( 36) CGGGAGGC 1 chr5:176871747-176871827 ( 27) TGGGAGGC 1 chr1:6685347-6685427 ( 30) CGGGAGGC 1 chr17:57921094-57921174 ( 37) TGGGAGGC 1 chr11:65405603-65405683 ( 71) CGGGAGGC 1 chr17:39848558-39848638 ( 63) TGGGAGGC 1 chr17:57921740-57921820 ( 52) TGGGAGGC 1 chr14:50049400-50049480 ( 25) CAGGAGGC 1 chr2:97778854-97778934 ( 1) CAGGAGGC 1 chr11:34073085-34073165 ( 7) CAGGAGGC 1 chr14:21924692-21924772 ( 32) TAGGAGGC 1 chr17:18967120-18967200 ( 5) CAGGAGGC 1 chr17:19015575-19015655 ( 50) CAGGAGGC 1 chr21:34960821-34960901 ( 23) GGGGAGGC 1 chr1:93427246-93427326 ( 54) GGGGAGGC 1 chr10:79801630-79801710 ( 30) GGGGAGGC 1 chr7:153106897-153106977 ( 23) GAGGAGGC 1 chr9:131464934-131465014 ( 29) AGGGAGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.6953 E= 1.8e+001 -241 67 -64 63 40 -1117 136 -1117 -1117 -1117 188 -1117 -1117 -1117 188 -1117 211 -1117 -1117 -1117 -1117 -1117 188 -1117 -1117 -1117 188 -1117 -1117 188 -1117 -1117 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 23 E= 1.8e+001 0.043478 0.434783 0.173913 0.347826 0.304348 0.000000 0.695652 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGGGAGGC MEME-1 regular expression -------------------------------------------------------------------------------- [CT][GA]GGAGGC -------------------------------------------------------------------------------- Time 5.07 secs. ******************************************************************************** ******************************************************************************** MOTIF TDCTTTTT MEME-2 width = 8 sites = 7 llr = 74 E-value = 1.6e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :3:::::: pos.-specific C ::a::::: probability G :3:::::: matrix T a4:aaaaa bits 2.2 * ***** 1.9 * ****** 1.7 * ****** 1.5 * ****** Relative 1.3 * ****** Entropy 1.1 * ****** (15.3 bits) 0.9 * ****** 0.6 * ****** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTCTTTTT consensus A sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:125395493-12539557 45 7.94e-06 TAACCACTAA TTCTTTTT CCACACCTTG chr1:142821932-142822012 28 7.94e-06 AGATTCTAGA TTCTTTTT ACTATAGTCA chr1:173831644-173831724 45 7.94e-06 acgcccagcc ttcttttt tcctttgaga chr4:29459-29539 46 1.61e-05 GTGTCCTCAC TACTTTTT GAATTTACCA chr2:27286014-27286094 4 1.61e-05 GGC TACTTTTT CCACTGCAAA chr2:178093000-178093080 69 2.57e-05 ctaggcgcag tgctTTTT GTGG chr11:65272065-65272145 8 2.57e-05 GGTAAAA TGCTTTTT GTTCATTTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:125395493-12539557 7.9e-06 44_[+2]_28 chr1:142821932-142822012 7.9e-06 27_[+2]_45 chr1:173831644-173831724 7.9e-06 44_[+2]_28 chr4:29459-29539 1.6e-05 45_[+2]_27 chr2:27286014-27286094 1.6e-05 3_[+2]_69 chr2:178093000-178093080 2.6e-05 68_[+2]_4 chr11:65272065-65272145 2.6e-05 7_[+2]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TDCTTTTT width=8 seqs=7 chr12:125395493-12539557 ( 45) TTCTTTTT 1 chr1:142821932-142822012 ( 28) TTCTTTTT 1 chr1:173831644-173831724 ( 45) TTCTTTTT 1 chr4:29459-29539 ( 46) TACTTTTT 1 chr2:27286014-27286094 ( 4) TACTTTTT 1 chr2:178093000-178093080 ( 69) TGCTTTTT 1 chr11:65272065-65272145 ( 8) TGCTTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.9536 E= 1.6e+004 -945 -945 -945 215 31 -945 7 93 -945 187 -945 -945 -945 -945 -945 215 -945 -945 -945 215 -945 -945 -945 215 -945 -945 -945 215 -945 -945 -945 215 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 7 E= 1.6e+004 0.000000 0.000000 0.000000 1.000000 0.285714 0.000000 0.285714 0.428571 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TDCTTTTT MEME-2 regular expression -------------------------------------------------------------------------------- T[TAG]CTTTTT -------------------------------------------------------------------------------- Time 8.92 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTGTTT MEME-3 width = 8 sites = 2 llr = 24 E-value = 2.3e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :::::::: probability G ::::a::: matrix T aaaa:aaa bits 2.2 **** *** 1.9 ******** 1.7 ******** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (17.0 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TTTTGTTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:24290535-24290615 60 7.94e-06 TGGGTGTTCA TTTTGTTT CCAGGGTAAT chr1:149606040-149606120 65 7.94e-06 TAAAAGTGGA TTTTGTTT GCTGTGGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:24290535-24290615 7.9e-06 59_[+3]_13 chr1:149606040-149606120 7.9e-06 64_[+3]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTGTTT width=8 seqs=2 chr1:24290535-24290615 ( 60) TTTTGTTT 1 chr1:149606040-149606120 ( 65) TTTTGTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 2.3e+004 -765 -765 -765 215 -765 -765 -765 215 -765 -765 -765 215 -765 -765 -765 215 -765 -765 187 -765 -765 -765 -765 215 -765 -765 -765 215 -765 -765 -765 215 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 2.3e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTGTTT MEME-3 regular expression -------------------------------------------------------------------------------- TTTTGTTT -------------------------------------------------------------------------------- Time 12.72 secs. ******************************************************************************** ******************************************************************************** MOTIF CCKCGGCC MEME-4 width = 8 sites = 46 llr = 346 E-value = 2.3e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::2::: pos.-specific C aa292:8a probability G ::516a2: matrix T ::3::::: bits 2.2 1.9 * * * 1.7 ** * * 1.5 ** * * * Relative 1.3 ** * * * Entropy 1.1 ** * *** (10.9 bits) 0.9 ** * *** 0.6 ** ***** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCGCGGCC consensus T C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:64345663-64345743 21 3.00e-05 GCGACGCAGG CCGCGGCC CCCGGAACGG chr16:11836532-11836612 32 3.00e-05 gctgccgccg ccgcggcc tccgcATTCC chr17:78075262-78075342 53 3.00e-05 ACGTGACCCA CCGCGGCC CCGCCCCGCG chr15:49268057-49268137 73 3.00e-05 GCCGCCAGCT CCGCGGCC chr3:194991674-194991754 20 3.00e-05 ACGGCCAGCG CCGCGGCC AGCAGCAGGG chr2:24307396-24307476 20 5.47e-05 CCTGGGAAGT CCTCGGCC GCCTCCAGAC chr1:145589365-145589445 53 5.47e-05 TGCACCCGCA CCTCGGCC ATAACGCGAC chr6:74224077-74224157 64 5.47e-05 gatccgccca cctcggcc tcccaaagt chr9:131314911-131314991 23 5.47e-05 CTTCAGCACC CCTCGGCC CGACGCACCC chr1:45234527-45234607 73 5.47e-05 aatcctccta cctcggcc chr17:74732661-74732741 36 8.47e-05 GCCGCCCACA CCCCGGCC ACTCCCGGGT chr19:7991308-7991388 48 8.47e-05 ACTCAAGCTC CCCCGGCC CTGGGGACCT chr17:46702694-46702774 60 8.47e-05 TGGCCGCTGG CCCCGGCC CCCGCCAGCT chr17:44270589-44270669 10 8.47e-05 GGCCGCCAC CCCCGGCC GCCTCTTTCC chr7:140624349-140624429 37 1.40e-04 ATGGCAGGGT CCGCAGCC GAAGAggccg chr7:139875539-139875619 25 1.40e-04 GCAGCGTccg ccgccgcc gccagccggc chr22:17652608-17652688 46 1.40e-04 GCCCGGGGGG CCGCAGCC ATCCGCAAgc chr22:35653604-35653684 24 1.40e-04 CCGTCGCCAC CCGCCGCC CTGGGCCCGC chr5:32312915-32312995 31 1.40e-04 CCCCAGCATA CCGCCGCC CTGGGAAGCA chr18:9102766-9102846 60 1.40e-04 CCCGGCGCTG CCGCCGCC CTTCTCTTGC chr2:183903148-183903228 52 1.40e-04 AGGCCGCTTC CCGCAGCC CCGGACGGGC chr1:36851379-36851459 56 1.40e-04 GAGCCTCTCA CCGCCGCC TCCCAGCGCA chr2:130939818-130939898 23 1.70e-04 GCGCACCTTT CCGCGGGC CGCGGGGATG chr6:18264610-18264690 21 1.70e-04 ATTTCGGCCG CCGCGGGC CTGGCACGCG chr14:35873868-35873948 23 1.70e-04 GTGCGCTGGG CCGCGGGC TGCGCGCTGC chr1:35450734-35450814 25 1.70e-04 GCACACGCCG CCGCGGGC CCGATCCCCT chr1:33430288-33430368 60 2.16e-04 cctcagcgcc cctcagcc agcgcccggc chr17:7137828-7137908 57 2.16e-04 ACCCCGCGCT CCTCAGCC GCCCTCCGTC chr6:28688425-28688505 32 2.16e-04 ctcccggcaa cctccgcc tcccgggttc chr1:93427246-93427326 16 2.16e-04 TCGCACCTCG CCTCCGCC GACACAAATC chr10:17280088-17280168 43 2.16e-04 aatcctccca cctcagcc tcctcagtag chr9:131464934-131465014 51 2.41e-04 GGGCGCGGGA CCTCGGGC GTGGGGTCCC chr7:128171019-128171099 58 2.41e-04 GGGCCTCCGA CCTCGGGC AGTCGCAGGA chr22:19279041-19279121 61 2.96e-04 CAGGGCAGCC CCCCAGCC CGCCGGGCCT chr2:97778854-97778934 31 2.96e-04 GCCCCGCCAG CCCCCGCC GGAGCCCGAG chr9:139567583-139567663 7 2.96e-04 ACAGCT CCCCAGCC ACTTCCAAGA chr1:212458897-212458977 10 3.26e-04 GGGGCAGCG CCCCGGGC GATGAGGGGC chr11:65837353-65837433 33 3.26e-04 GAGCCGGCTT CCCCGGGC AGACCCCCAC chr1:39492313-39492393 66 4.11e-04 gatttcggcc ccgccggc ctcctga chr9:136150521-136150601 34 4.11e-04 TCGCGGGCAC CCGGGGCC GAGGCCTGCA chr17:40021678-40021758 54 4.11e-04 gccaggtcgc ccgccggc cgcACATGCG chr11:34073085-34073165 26 4.11e-04 CCCCACAGCG CCGGGGCC GGGGGACGGC chr1:6685347-6685427 44 4.11e-04 AGGCCCAGAC CCGGGGCC CGCGGACCGA chr7:6500201-6500281 58 4.82e-04 tcaacacatg cctgggcc caaagcatgt chr17:76164715-76164795 2 5.12e-04 G GCGCGGCC AAGGCGGGCG chr7:44887438-44887518 6 6.78e-04 gAGGG GCTCGGCC GGACGAAGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:64345663-64345743 3e-05 20_[+4]_52 chr16:11836532-11836612 3e-05 31_[+4]_41 chr17:78075262-78075342 3e-05 52_[+4]_20 chr15:49268057-49268137 3e-05 72_[+4] chr3:194991674-194991754 3e-05 19_[+4]_53 chr2:24307396-24307476 5.5e-05 19_[+4]_53 chr1:145589365-145589445 5.5e-05 52_[+4]_20 chr6:74224077-74224157 5.5e-05 63_[+4]_9 chr9:131314911-131314991 5.5e-05 22_[+4]_50 chr1:45234527-45234607 5.5e-05 72_[+4] chr17:74732661-74732741 8.5e-05 35_[+4]_37 chr19:7991308-7991388 8.5e-05 47_[+4]_25 chr17:46702694-46702774 8.5e-05 59_[+4]_13 chr17:44270589-44270669 8.5e-05 9_[+4]_63 chr7:140624349-140624429 0.00014 36_[+4]_36 chr7:139875539-139875619 0.00014 24_[+4]_48 chr22:17652608-17652688 0.00014 45_[+4]_27 chr22:35653604-35653684 0.00014 23_[+4]_49 chr5:32312915-32312995 0.00014 30_[+4]_42 chr18:9102766-9102846 0.00014 59_[+4]_13 chr2:183903148-183903228 0.00014 51_[+4]_21 chr1:36851379-36851459 0.00014 55_[+4]_17 chr2:130939818-130939898 0.00017 22_[+4]_50 chr6:18264610-18264690 0.00017 20_[+4]_52 chr14:35873868-35873948 0.00017 22_[+4]_50 chr1:35450734-35450814 0.00017 24_[+4]_48 chr1:33430288-33430368 0.00022 59_[+4]_13 chr17:7137828-7137908 0.00022 56_[+4]_16 chr6:28688425-28688505 0.00022 31_[+4]_41 chr1:93427246-93427326 0.00022 15_[+4]_57 chr10:17280088-17280168 0.00022 42_[+4]_30 chr9:131464934-131465014 0.00024 50_[+4]_22 chr7:128171019-128171099 0.00024 57_[+4]_15 chr22:19279041-19279121 0.0003 60_[+4]_12 chr2:97778854-97778934 0.0003 30_[+4]_42 chr9:139567583-139567663 0.0003 6_[+4]_66 chr1:212458897-212458977 0.00033 9_[+4]_63 chr11:65837353-65837433 0.00033 32_[+4]_40 chr1:39492313-39492393 0.00041 65_[+4]_7 chr9:136150521-136150601 0.00041 33_[+4]_39 chr17:40021678-40021758 0.00041 53_[+4]_19 chr11:34073085-34073165 0.00041 25_[+4]_47 chr1:6685347-6685427 0.00041 43_[+4]_29 chr7:6500201-6500281 0.00048 57_[+4]_15 chr17:76164715-76164795 0.00051 1_[+4]_71 chr7:44887438-44887518 0.00068 5_[+4]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCKCGGCC width=8 seqs=46 chr6:64345663-64345743 ( 21) CCGCGGCC 1 chr16:11836532-11836612 ( 32) CCGCGGCC 1 chr17:78075262-78075342 ( 53) CCGCGGCC 1 chr15:49268057-49268137 ( 73) CCGCGGCC 1 chr3:194991674-194991754 ( 20) CCGCGGCC 1 chr2:24307396-24307476 ( 20) CCTCGGCC 1 chr1:145589365-145589445 ( 53) CCTCGGCC 1 chr6:74224077-74224157 ( 64) CCTCGGCC 1 chr9:131314911-131314991 ( 23) CCTCGGCC 1 chr1:45234527-45234607 ( 73) CCTCGGCC 1 chr17:74732661-74732741 ( 36) CCCCGGCC 1 chr19:7991308-7991388 ( 48) CCCCGGCC 1 chr17:46702694-46702774 ( 60) CCCCGGCC 1 chr17:44270589-44270669 ( 10) CCCCGGCC 1 chr7:140624349-140624429 ( 37) CCGCAGCC 1 chr7:139875539-139875619 ( 25) CCGCCGCC 1 chr22:17652608-17652688 ( 46) CCGCAGCC 1 chr22:35653604-35653684 ( 24) CCGCCGCC 1 chr5:32312915-32312995 ( 31) CCGCCGCC 1 chr18:9102766-9102846 ( 60) CCGCCGCC 1 chr2:183903148-183903228 ( 52) CCGCAGCC 1 chr1:36851379-36851459 ( 56) CCGCCGCC 1 chr2:130939818-130939898 ( 23) CCGCGGGC 1 chr6:18264610-18264690 ( 21) CCGCGGGC 1 chr14:35873868-35873948 ( 23) CCGCGGGC 1 chr1:35450734-35450814 ( 25) CCGCGGGC 1 chr1:33430288-33430368 ( 60) CCTCAGCC 1 chr17:7137828-7137908 ( 57) CCTCAGCC 1 chr6:28688425-28688505 ( 32) CCTCCGCC 1 chr1:93427246-93427326 ( 16) CCTCCGCC 1 chr10:17280088-17280168 ( 43) CCTCAGCC 1 chr9:131464934-131465014 ( 51) CCTCGGGC 1 chr7:128171019-128171099 ( 58) CCTCGGGC 1 chr22:19279041-19279121 ( 61) CCCCAGCC 1 chr2:97778854-97778934 ( 31) CCCCCGCC 1 chr9:139567583-139567663 ( 7) CCCCAGCC 1 chr1:212458897-212458977 ( 10) CCCCGGGC 1 chr11:65837353-65837433 ( 33) CCCCGGGC 1 chr1:39492313-39492393 ( 66) CCGCCGGC 1 chr9:136150521-136150601 ( 34) CCGGGGCC 1 chr17:40021678-40021758 ( 54) CCGCCGGC 1 chr11:34073085-34073165 ( 26) CCGGGGCC 1 chr1:6685347-6685427 ( 44) CCGGGGCC 1 chr7:6500201-6500281 ( 58) CCTGGGCC 1 chr17:76164715-76164795 ( 2) GCGCGGCC 1 chr7:44887438-44887518 ( 6) GCTCGGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.69444 E= 2.3e+004 -1217 181 -264 -1217 -1217 188 -1217 -1217 -1217 -48 88 44 -1217 174 -164 -1217 -41 -33 116 -1217 -1217 -1217 188 -1217 -1217 152 -32 -1217 -1217 188 -1217 -1217 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 46 E= 2.3e+004 0.000000 0.956522 0.043478 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.195652 0.500000 0.304348 0.000000 0.913043 0.086957 0.000000 0.173913 0.217391 0.608696 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.782609 0.217391 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCKCGGCC MEME-4 regular expression -------------------------------------------------------------------------------- CC[GT]C[GC]G[CG]C -------------------------------------------------------------------------------- Time 16.55 secs. ******************************************************************************** ******************************************************************************** MOTIF CTYCAGCC MEME-5 width = 8 sites = 10 llr = 102 E-value = 1.5e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::a::: pos.-specific C a:6a::aa probability G :::::a:: matrix T :a4::::: bits 2.2 * * 1.9 ** ***** 1.7 ** ***** 1.5 ** ***** Relative 1.3 ** ***** Entropy 1.1 ******** (14.7 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCCAGCC consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:138725434-138725514 58 2.10e-05 GGGCTCGGGT CTCCAGCC CGGCCGGGAG chr6:13574485-13574565 26 2.10e-05 ACGGCCTCCT CTCCAGCC GGCGCGCCCG chr1:145444137-145444217 54 2.10e-05 accacttgca ctccagcc tgggggacag chr3:152880151-152880231 23 2.10e-05 CAGCTAGGAG CTCCAGCC GTCGCCTCGC chr7:44843782-44843862 68 2.10e-05 ggccattgca ctccagcc tgggg chr17:41153013-41153093 19 2.10e-05 caccattgta ctccagcc tgggcaagga chr16:2203718-2203798 61 3.85e-05 AAAGCCATGT CTTCAGCC GCACATGCTC chr17:44270589-44270669 42 3.85e-05 GGGGAGCGCG CTTCAgcc gccccccgcg chr12:54057603-54057683 49 3.85e-05 aattctcctg cttcagcc tcccaagtag chr11:61731740-61731820 16 3.85e-05 TCCCAGACTA CTTCAGCC TTTAATGCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:138725434-138725514 2.1e-05 57_[+5]_15 chr6:13574485-13574565 2.1e-05 25_[+5]_47 chr1:145444137-145444217 2.1e-05 53_[+5]_19 chr3:152880151-152880231 2.1e-05 22_[+5]_50 chr7:44843782-44843862 2.1e-05 67_[+5]_5 chr17:41153013-41153093 2.1e-05 18_[+5]_54 chr16:2203718-2203798 3.8e-05 60_[+5]_12 chr17:44270589-44270669 3.8e-05 41_[+5]_31 chr12:54057603-54057683 3.8e-05 48_[+5]_24 chr11:61731740-61731820 3.8e-05 15_[+5]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTYCAGCC width=8 seqs=10 chr6:138725434-138725514 ( 58) CTCCAGCC 1 chr6:13574485-13574565 ( 26) CTCCAGCC 1 chr1:145444137-145444217 ( 54) CTCCAGCC 1 chr3:152880151-152880231 ( 23) CTCCAGCC 1 chr7:44843782-44843862 ( 68) CTCCAGCC 1 chr17:41153013-41153093 ( 19) CTCCAGCC 1 chr16:2203718-2203798 ( 61) CTTCAGCC 1 chr17:44270589-44270669 ( 42) CTTCAGCC 1 chr12:54057603-54057683 ( 49) CTTCAGCC 1 chr11:61731740-61731820 ( 16) CTTCAGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2669 E= 1.5e+004 -997 187 -997 -997 -997 -997 -997 215 -997 114 -997 83 -997 187 -997 -997 211 -997 -997 -997 -997 -997 188 -997 -997 187 -997 -997 -997 187 -997 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 1.5e+004 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.600000 0.000000 0.400000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYCAGCC MEME-5 regular expression -------------------------------------------------------------------------------- CT[CT]CAGCC -------------------------------------------------------------------------------- Time 20.27 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:47277124-47277204 2.85e-01 80 chr1:46783173-46783253 6.64e-01 80 chr19:3975916-3975996 4.16e-01 80 chr12:49668358-49668438 8.45e-01 80 chr16:56975217-56975297 1.17e-01 80 chr17:57921740-57921820 5.21e-02 51_[+1(4.65e-05)]_21 chr17:41153013-41153093 8.10e-02 18_[+5(2.10e-05)]_54 chr3:195782274-195782354 8.22e-01 80 chr5:40829413-40829493 4.38e-01 80 chr17:72983820-72983900 2.69e-01 80 chr12:49667730-49667810 2.01e-01 80 chr1:149606040-149606120 2.99e-02 64_[+3(7.94e-06)]_8 chr11:65837353-65837433 1.77e-01 80 chr11:61731740-61731820 3.20e-03 15_[+5(3.85e-05)]_57 chr17:19091379-19091459 6.87e-01 80 chr3:195786280-195786360 5.00e-01 80 chr10:17280088-17280168 3.29e-02 4_[+5(7.74e-05)]_68 chr1:17185458-17185538 5.03e-01 80 chr1:147994345-147994425 4.28e-01 80 chr12:54057603-54057683 9.06e-02 48_[+5(3.85e-05)]_24 chr1:1285169-1285249 3.25e-01 80 chr6:68590290-68590370 9.86e-01 80 chr1:45234527-45234607 3.12e-02 72_[+4(5.47e-05)] chr2:178089055-178089135 1.61e-01 80 chr7:26252635-26252715 9.95e-01 80 chr1:24290535-24290615 7.78e-03 59_[+3(7.94e-06)]_13 chr17:16286624-16286704 2.18e-02 18_[+3(2.92e-05)]_54 chr2:201716602-201716682 2.99e-01 80 chr17:19015575-19015655 2.10e-01 49_[+1(8.60e-05)]_23 chr7:26228254-26228334 8.64e-01 80 chr17:18967120-18967200 2.10e-01 4_[+1(8.60e-05)]_68 chr14:21924692-21924772 7.70e-02 31_[+1(8.60e-05)]_41 chr1:173830980-173831060 1.47e-01 80 chr5:137908239-137908319 3.29e-01 80 chr12:120634008-12063408 2.85e-01 80 chr1:173831644-173831724 1.62e-03 44_[+2(7.94e-06)]_28 chr7:26227319-26227399 4.17e-01 80 chr1:36851379-36851459 3.45e-02 80 chr15:34781303-34781383 6.84e-01 80 chr11:9612012-9612092 3.46e-01 80 chr7:5565980-5566060 7.42e-01 80 chr10:79801007-79801087 9.55e-01 80 chr7:44843782-44843862 1.21e-02 67_[+5(2.10e-05)]_5 chr3:23962720-23962800 3.21e-01 80 chr9:130208635-130208715 8.07e-01 80 chr17:76164715-76164795 1.69e-01 80 chr19:58906751-58906831 8.51e-01 80 chr10:103124620-10312470 7.01e-01 80 chr6:35439518-35439598 2.81e-01 80 chr1:36046905-36046985 3.92e-01 80 chr3:195775749-195775829 6.78e-01 80 chr11:62657131-62657211 4.62e-01 80 chr11:65272699-65272779 8.88e-01 80 chr12:46751470-46751550 2.78e-01 80 chr22:17138239-17138319 4.48e-01 80 chr6:111219573-111219653 3.41e-01 80 chr6:26031565-26031645 4.84e-01 80 chr1:109783076-109783156 9.49e-01 80 chr19:1259347-1259427 2.37e-01 80 chr1:142821932-142822012 1.52e-02 27_[+2(7.94e-06)]_45 chr18:2572240-2572320 6.13e-01 80 chr19:49995917-49995997 9.88e-01 80 chr6:13711753-13711833 7.53e-02 80 chr1:46780640-46780720 9.98e-01 80 chr17:39848558-39848638 1.91e-01 62_[+1(4.65e-05)]_10 chr16:21513652-21513732 2.16e-01 80 chr10:79801630-79801710 1.77e-02 80 chr15:45019390-45019470 9.43e-02 80 chr11:65273322-65273402 7.29e-01 80 chr1:28835009-28835089 9.76e-01 80 chr5:137802068-137802148 3.45e-01 80 chr1:35450734-35450814 1.40e-01 80 chr19:49118138-49118218 9.78e-02 80 chr11:65405603-65405683 3.86e-02 70_[+1(4.65e-05)]_2 chr16:56975956-56976036 1.62e-01 80 chr7:155102624-155102704 6.49e-01 80 chr17:45191388-45191468 6.04e-01 80 chr20:37048590-37048670 7.29e-01 80 chr15:30114514-30114594 5.47e-01 80 chr7:128171019-128171099 1.38e-01 80 chr17:57920507-57920587 8.89e-01 80 chr11:66131419-66131499 1.42e-03 4_[+3(2.92e-05)]_68 chr6:68589092-68589172 7.86e-01 80 chr1:145439437-145439517 9.96e-01 80 chr6:31600958-31601038 2.00e-01 80 chr8:91234324-91234404 7.58e-01 80 chr3:152880151-152880231 3.13e-02 22_[+5(2.10e-05)]_50 chr16:31202564-31202644 8.35e-01 80 chr17:57921094-57921174 1.48e-01 36_[+1(4.65e-05)]_36 chr3:177062708-177062788 7.79e-01 80 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