******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/HNRNPLL.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr4:154073328-154073408 1.0000 80 chr8:11205167-11205247 1.0000 80 chr16:1386131-1386211 1.0000 80 chr4:8594407-8594487 1.0000 80 chr10:93668367-93668447 1.0000 80 chr8:121135935-121136015 1.0000 80 chr7:44349381-44349461 1.0000 80 chr5:122181503-122181583 1.0000 80 chr2:152042639-152042719 1.0000 80 chr10:7210504-7210584 1.0000 80 chr10:124914579-12491465 1.0000 80 chr10:97055113-97055193 1.0000 80 chr4:113444344-113444424 1.0000 80 chr13:32420880-32420960 1.0000 80 chr8:98656921-98657001 1.0000 80 chr3:45187552-45187632 1.0000 80 chr2:111906600-111906680 1.0000 80 chr10:81838643-81838723 1.0000 80 chr1:155100324-155100404 1.0000 80 chr19:20012037-20012117 1.0000 80 chr2:85914490-85914570 1.0000 80 chr19:54974901-54974981 1.0000 80 chr1:36593936-36594016 1.0000 80 chr14:74226120-74226200 1.0000 80 chr14:67708342-67708422 1.0000 80 chr15:57620830-57620910 1.0000 80 chr1:33896076-33896156 1.0000 80 chr22:31064135-31064215 1.0000 80 chr2:113470962-113471042 1.0000 80 chr7:157130598-157130678 1.0000 80 chr16:68323716-68323796 1.0000 80 chr7:8301831-8301911 1.0000 80 chr6:13487512-13487592 1.0000 80 chr5:173846658-173846738 1.0000 80 chr19:14184602-14184682 1.0000 80 chr22:47133913-47133993 1.0000 80 chr17:7660448-7660528 1.0000 80 chr9:32552579-32552659 1.0000 80 chr14:97207840-97207920 1.0000 80 chr19:49436809-49436889 1.0000 80 chr2:176995206-176995286 1.0000 80 chr6:28778225-28778305 1.0000 80 chr19:10829099-10829179 1.0000 80 chr6:42420196-42420276 1.0000 80 chr15:74220059-74220139 1.0000 80 chr5:76788240-76788320 1.0000 80 chrX:108780669-108780749 1.0000 80 chr2:27069351-27069431 1.0000 80 chr9:129428873-129428953 1.0000 80 chr13:22245185-22245265 1.0000 80 chr7:26242434-26242514 1.0000 80 chr9:34628984-34629064 1.0000 80 chr18:51750949-51751029 1.0000 80 chr22:19868862-19868942 1.0000 80 chr7:142552457-142552537 1.0000 80 chrX:107019410-107019490 1.0000 80 chr1:1961651-1961731 1.0000 80 chr3:121554069-121554149 1.0000 80 chr2:157190461-157190541 1.0000 80 chr20:62084781-62084861 1.0000 80 chr6:130339637-130339717 1.0000 80 chr3:44518909-44518989 1.0000 80 chr6:79943407-79943487 1.0000 80 chr9:7799758-7799838 1.0000 80 chr16:30006517-30006597 1.0000 80 chr2:38603406-38603486 1.0000 80 chr20:60719534-60719614 1.0000 80 chr9:136324800-136324880 1.0000 80 chr5:114962055-114962135 1.0000 80 chr9:38068295-38068375 1.0000 80 chr5:137089033-137089113 1.0000 80 chrX:129299723-129299803 1.0000 80 chr7:36430026-36430106 1.0000 80 chr16:89884089-89884169 1.0000 80 chr13:50018539-50018619 1.0000 80 chr20:443540-443620 1.0000 80 chr15:66131981-66132061 1.0000 80 chr5:134802001-134802081 1.0000 80 chr8:8559243-8559323 1.0000 80 chr11:60673626-60673706 1.0000 80 chr1:95538747-95538827 1.0000 80 chr19:14640839-14640919 1.0000 80 chr8:22842849-22842929 1.0000 80 chr1:6484520-6484600 1.0000 80 chr19:6741080-6741160 1.0000 80 chr16:68298823-68298903 1.0000 80 chr4:144105738-144105818 1.0000 80 chr17:11900630-11900710 1.0000 80 chr3:80819704-80819784 1.0000 80 chr10:2357328-2357408 1.0000 80 chr5:77541043-77541123 1.0000 80 chr22:25843996-25844076 1.0000 80 chr15:34875847-34875927 1.0000 80 chr3:80819489-80819569 1.0000 80 chr2:198363696-198363776 1.0000 80 chr1:234736034-234736114 1.0000 80 chr9:140571062-140571142 1.0000 80 chr9:140008386-140008466 1.0000 80 chr9:5450480-5450560 1.0000 80 chr13:29292947-29293027 1.0000 80 chr2:149403283-149403363 1.0000 80 chrX:47092906-47092986 1.0000 80 chr18:3248179-3248259 1.0000 80 chr19:1841251-1841331 1.0000 80 chr20:443253-443333 1.0000 80 chr19:51843719-51843799 1.0000 80 chr3:122640805-122640885 1.0000 80 chr2:208489375-208489455 1.0000 80 chr9:103361113-103361193 1.0000 80 chr8:144660253-144660333 1.0000 80 chr4:1243222-1243302 1.0000 80 chr10:112257889-11225796 1.0000 80 chr3:119813410-119813490 1.0000 80 chr9:140173211-140173291 1.0000 80 chr19:38806460-38806540 1.0000 80 chr1:91082146-91082226 1.0000 80 chr9:134510840-134510920 1.0000 80 chr8:55383136-55383216 1.0000 80 chr1:213218699-213218779 1.0000 80 chr11:76082320-76082400 1.0000 80 chr19:36360628-36360708 1.0000 80 chr19:47808753-47808833 1.0000 80 chr10:103929391-10392947 1.0000 80 chrX:150250905-150250985 1.0000 80 chr19:12958633-12958713 1.0000 80 chr8:145690699-145690779 1.0000 80 chr18:55785447-55785527 1.0000 80 chr11:113185440-11318552 1.0000 80 chr13:100258951-10025903 1.0000 80 chr17:8060147-8060227 1.0000 80 chr12:44152601-44152681 1.0000 80 chr3:137906013-137906093 1.0000 80 chr22:19946811-19946891 1.0000 80 chr18:7566752-7566832 1.0000 80 chr11:33280236-33280316 1.0000 80 chr21:45118624-45118704 1.0000 80 chr12:7013984-7014064 1.0000 80 chr3:129024545-129024625 1.0000 80 chr3:168960231-168960311 1.0000 80 chr2:64751900-64751980 1.0000 80 chr20:52225193-52225273 1.0000 80 chr14:32672353-32672433 1.0000 80 chr9:138798338-138798418 1.0000 80 chr11:72533272-72533352 1.0000 80 chr10:94351487-94351567 1.0000 80 chr12:56137308-56137388 1.0000 80 chr8:11660652-11660732 1.0000 80 chr4:187125543-187125623 1.0000 80 chr11:65123143-65123223 1.0000 80 chr6:10419393-10419473 1.0000 80 chr7:77168084-77168164 1.0000 80 chr18:13727034-13727114 1.0000 80 chr2:64872375-64872455 1.0000 80 chr1:25558593-25558673 1.0000 80 chr7:92157180-92157260 1.0000 80 chr17:7339133-7339213 1.0000 80 chr4:1005948-1006028 1.0000 80 chr2:86669340-86669420 1.0000 80 chrX:55515434-55515514 1.0000 80 chrX:119587997-119588077 1.0000 80 chr3:111697880-111697960 1.0000 80 chrX:44402190-44402270 1.0000 80 chrX:52950074-52950154 1.0000 80 chr21:45118857-45118937 1.0000 80 chr11:63448702-63448782 1.0000 80 chr18:55253769-55253849 1.0000 80 chr2:68478632-68478712 1.0000 80 chr18:9135926-9136006 1.0000 80 chr7:100253961-100254041 1.0000 80 chr15:51915163-51915243 1.0000 80 chr1:156818723-156818803 1.0000 80 chr16:58018752-58018832 1.0000 80 chr9:126031235-126031315 1.0000 80 chr9:26892449-26892529 1.0000 80 chr1:78355073-78355153 1.0000 80 chr4:160024221-160024301 1.0000 80 chr1:10458550-10458630 1.0000 80 chr21:45158575-45158655 1.0000 80 chr1:74663964-74664044 1.0000 80 chr3:146262343-146262423 1.0000 80 chr17:18266928-18267008 1.0000 80 chr14:21131453-21131533 1.0000 80 chr6:112408723-112408803 1.0000 80 chr19:38085560-38085640 1.0000 80 chr19:35596843-35596923 1.0000 80 chr19:38806711-38806791 1.0000 80 chr9:117160979-117161059 1.0000 80 chr1:8763140-8763220 1.0000 80 chr4:164087579-164087659 1.0000 80 chr2:234776970-234777050 1.0000 80 chr5:34008258-34008338 1.0000 80 chr2:23806437-23806517 1.0000 80 chr3:52091578-52091658 1.0000 80 chr17:1588108-1588188 1.0000 80 chr13:38211014-38211094 1.0000 80 chr8:17013635-17013715 1.0000 80 chr3:110240031-110240111 1.0000 80 chr1:22109123-22109203 1.0000 80 chrX:149106753-149106833 1.0000 80 chr12:6603400-6603480 1.0000 80 chr14:64969721-64969801 1.0000 80 chr19:58446730-58446810 1.0000 80 chr1:113421077-113421157 1.0000 80 chr9:124976284-124976364 1.0000 80 chr5:141468577-141468657 1.0000 80 chr12:110700762-11070084 1.0000 80 chr1:1004637-1004717 1.0000 80 chr9:102582441-102582521 1.0000 80 chr6:74363841-74363921 1.0000 80 chr4:106395148-106395228 1.0000 80 chr4:87856202-87856282 1.0000 80 chrX:100075222-100075302 1.0000 80 chr1:6662289-6662369 1.0000 80 chr17:7145918-7145998 1.0000 80 chr12:30908077-30908157 1.0000 80 chr11:77532191-77532271 1.0000 80 chr1:27692747-27692827 1.0000 80 chr10:88281476-88281556 1.0000 80 chr14:39736261-39736341 1.0000 80 chr14:89029326-89029406 1.0000 80 chr3:194208365-194208445 1.0000 80 chr5:56111494-56111574 1.0000 80 chr22:39941949-39942029 1.0000 80 chr3:140661384-140661464 1.0000 80 chr11:124746289-12474636 1.0000 80 chr2:113239521-113239601 1.0000 80 chr1:85039961-85040041 1.0000 80 chr17:48227415-48227495 1.0000 80 chr2:54013520-54013600 1.0000 80 chrX:23761474-23761554 1.0000 80 chr6:166797077-166797157 1.0000 80 chr1:86861710-86861790 1.0000 80 chr6:80816336-80816416 1.0000 80 chr8:21777043-21777123 1.0000 80 chr10:103347765-10334784 1.0000 80 chr7:156741470-156741550 1.0000 80 chr13:26795632-26795712 1.0000 80 chr3:145968550-145968630 1.0000 80 chr20:52225393-52225473 1.0000 80 chr19:34895230-34895310 1.0000 80 chr19:40030810-40030890 1.0000 80 chr22:41417926-41418006 1.0000 80 chr1:41327966-41328046 1.0000 80 chr11:22850920-22851000 1.0000 80 chr4:48272015-48272095 1.0000 80 chr13:79980423-79980503 1.0000 80 chr10:111985544-11198562 1.0000 80 chr10:128193455-12819353 1.0000 80 chr6:80247191-80247271 1.0000 80 chr9:137000830-137000910 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_HNRNPLL/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/HNRNPLL.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.182 C 0.321 G 0.319 T 0.177 Background letter frequencies (from file dataset with add-one prior applied): A 0.182 C 0.321 G 0.319 T 0.177 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF YTGCGCAR MEME-1 width = 8 sites = 250 llr = 1277 E-value = 7.1e-059 ******************************************************************************** -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 Description -------------------------------------------------------------------------------- Simplified A 122:::73 pos.-specific C 5:1a:721 probability G 117:a1:5 matrix T 37:::211 bits 2.5 2.2 2.0 1.7 * Relative 1.5 ** Entropy 1.2 * ** (7.4 bits) 1.0 * ** * 0.7 * **** 0.5 ****** 0.2 ******** 0.0 -------- Multilevel CTGCGCAG consensus TA A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:48272015-48272095 9 3.00e-05 TGGCAGGT TTGCGCAG CCCTGCGGCG chr12:30908077-30908157 3 3.00e-05 CT TTGCGCAG ATTGCGGGGC chr12:110700762-11070084 25 3.00e-05 cagagatcag ttgcgcaa ggtgcgtata chr1:25558593-25558673 27 3.00e-05 CTCCCGGAAT TTGCGCAG TCTCTGTTCG chr7:77168084-77168164 50 3.00e-05 CCTACGGATA TTGCGCAA GACTGGGGCG chr10:94351487-94351567 17 3.00e-05 CGGCGGATGT TTGCGCAG CTTCCTTGAG chr14:32672353-32672433 53 3.00e-05 cgtgtcatcc ttgcgcag gggccatgct chr18:55785447-55785527 58 3.00e-05 AAGGCGCTGC TTGCGCAG TAAGCACTTG chr18:3248179-3248259 59 3.00e-05 TCAAGAGGGT TTGCGCAA AAACGTAGCC chr9:38068295-38068375 34 3.00e-05 GGCGCGCAGT TTGCGCAG CGACGAGCCA chr6:13487512-13487592 38 3.00e-05 CCCGCGTCGT TTGCGCAG CCGGCGAATC chr1:36593936-36594016 33 3.00e-05 CACCAGCTAT TTGCGCAG AGGTCGTGGA chr2:85914490-85914570 32 3.00e-05 TCTGAGTCAT TTGCGCAA GCTGGGGAGA chr10:93668367-93668447 4 3.00e-05 TTC TTGCGCAG CCCTCCCAGC chr9:137000830-137000910 52 8.43e-05 GCGACGCCAC CTGCGCAG GTCCCGGAGG chr1:27692747-27692827 64 8.43e-05 GAAGGGCAGG CTGCGCAG CTgcggggg chr5:34008258-34008338 15 8.43e-05 TTTTGCGGGC CTGCGCAA GCCCGCGGAG chr3:146262343-146262423 14 8.43e-05 GGCACAGCTG CTGCGCAA CCTTCTCAGA chrX:44402190-44402270 63 8.43e-05 CTTCTGCCTT CTGCGCAG GCGCGAAACT chr11:65123143-65123223 20 8.43e-05 CACCCGGTGC CTGCGCAA GTCCTCATCT chr11:72533272-72533352 46 8.43e-05 CGAGCGCAAC CTGCGCAA CGAGCGCCGG chr19:12958633-12958713 33 8.43e-05 CCGCAGGCCA CTGCGCAG ATGGAGGAGA chr10:112257889-11225796 21 8.43e-05 CGGGCGCCAG CTGCGCAA GATGCTCCGC chr3:122640805-122640885 56 8.43e-05 GATGCGCAGG CTGCGCAG GGGCTCGCGG chr13:29292947-29293027 58 8.43e-05 GCTGCTCCTT CTGCGCAG TGGACAATCG chr9:5450480-5450560 66 8.43e-05 GGCCCCAGTT CTGCGCAG CTTCCCG chr4:144105738-144105818 48 8.43e-05 TCGCAGCCAT CTGCGCAG CGTCCGCCGG chr11:60673626-60673706 32 8.43e-05 CTGCGGGGCA CTGCGCAA ATGCACCCCG chr6:79943407-79943487 3 8.43e-05 GC CTGCGCAG AAGAGGACAG chr13:22245185-22245265 50 8.43e-05 CCGGCGGGGG CTGCGCAG GAGGAGCGCT chr5:173846658-173846738 24 8.43e-05 TTTGCGCCTT CTGCGCAG CCTCTTGCAA chr14:67708342-67708422 15 8.43e-05 CCCCCACACG CTGCGCAA ACTCCGGCCA chr4:113444344-113444424 41 8.43e-05 GCAGCGCTCC CTGCGCAA GTAGTTCTTC chr9:117160979-117161059 73 1.01e-04 GGTAAGGCAT TTACGCAA chr19:38806460-38806540 45 1.01e-04 CGTACGCCAC TTACGCAG CCGGGGCGTC chrX:129299723-129299803 16 1.01e-04 CACACGCACA TTACGCAG ACTCCTCCTC chr20:60719534-60719614 25 1.01e-04 CGGGGCATCG TTACGCAG CCCGGCCCCG chrX:108780669-108780749 56 1.01e-04 CAGTGAATAT TTACGCAA TGTGGGAAAG chr17:7145918-7145998 12 1.32e-04 AATTTGTGGG CTACGCAG GCGACGTAGC chr12:44152601-44152681 51 1.32e-04 AAGACGCGCC CTACGCAA TACGTGGAGT chr9:140173211-140173291 45 1.32e-04 GGTGTGTGTC CTACGCAA ACGGCGCCTC chr3:52091578-52091658 70 1.49e-04 GGCGGCGCGC TTGCGTAG GAC chr3:145968550-145968630 55 2.10e-04 CGGGAACTGC TAGCGCAG GACGCCGCGC chr1:6662289-6662369 38 2.10e-04 GTCCCGCAGG TAGCGCAG CAGGCGCGCC chrX:47092906-47092986 4 2.10e-04 AAA CTGCGTAG GAACCTGGGA chr2:198363696-198363776 50 2.10e-04 CATCAGCCAC TAGCGCAA GCTAAAGAGG chr17:11900630-11900710 59 2.10e-04 CGGACGCAGA TAGCGCAA GGCCTGACCC chr3:121554069-121554149 69 2.10e-04 TAATTATGAA TAGCGCAG CGGG chr14:74226120-74226200 45 2.10e-04 cgcgcgcAAG CTGCGTAG CTGCACAAAC chr19:54974901-54974981 51 2.10e-04 GGAAAGCAAG CTGCGTAA AGGCTGCGGC chr19:20012037-20012117 35 2.10e-04 GCTGCGCTTA TAGCGCAG CCCCCAGGCG chr11:124746289-12474636 40 2.65e-04 GCGCCGGAAA CAGCGCAA AGAGCTCAGC chr17:1588108-1588188 1 2.65e-04 . CAGCGCAA TGGCGGCCAG chr22:19946811-19946891 59 2.65e-04 TGGCCGGTGA CAGCGCAG GGTCAGCCCT chr6:130339637-130339717 51 2.65e-04 gcACCGGCAC CAGCGCAG TTTCCCCTCT chr22:47133913-47133993 32 2.65e-04 gcTCCGCCAC CAGCGCAG CAGAGCCCGC chr7:8301831-8301911 72 2.65e-04 GTGCGCACCG CAGCGCAG C chr7:157130598-157130678 48 2.65e-04 GGGCAGGAAA CAGCGCAA GTAGAACGAT chr13:32420880-32420960 44 2.65e-04 gagcgcagcg cagcgcag ggagcgcagG chr10:7210504-7210584 26 2.65e-04 CCTGCGTGAT CAGCGCAA CCAAACATGC chr12:7013984-7014064 73 2.76e-04 CCCGGCTGAT TTGCGCAT chr8:21777043-21777123 44 2.95e-04 CCCAGCGGTG CTGCGCAT TCTCCAACCA chr22:19868862-19868942 20 2.95e-04 AGAGCGCAGC CTGCGCAT TCCAGCAGGC chr17:7660448-7660528 58 2.95e-04 AGCCGAGGAC CTGCGCAT TCTGCGTGAA chr11:33280236-33280316 54 3.55e-04 GCTTGAGGAA TTGCGCTG AAGAGTGTGT chr20:62084781-62084861 25 3.55e-04 CCTGGGAAAA ATGCGCAG ACATCTCGTG chr2:113470962-113471042 61 3.55e-04 GCTGCCTGGA ATGCGCAG ATCTCAGACT chr22:41417926-41418006 31 4.57e-04 TGGGCGCCAT TTCCGCAG CCCAGCTCGG chr13:26795632-26795712 20 4.57e-04 GGCCCCTACC TTCCGCAA CAAACTTAGG chr4:87856202-87856282 54 4.57e-04 GCCTCCGCGG TTCCGCAG CCGAGCCCCG chr14:21131453-21131533 23 4.57e-04 TCACTGGACT TTCCGCAA ATGGAGGAAG chr1:10458550-10458630 2 4.57e-04 C CTGCGCTG TCTGCGCCTG chr9:126031235-126031315 3 4.57e-04 AG CTGCGCTG GGAGGCTAGC chr7:100253961-100254041 25 4.57e-04 ATAGTGCCCG CTGCGCTG CTAGCGGCCC chr17:7339133-7339213 31 4.57e-04 CTTCCGTGTT TTCCGCAG CCCAAAGCGA chr11:76082320-76082400 18 4.57e-04 ggggccttcc ctgcgctg tttactcagc chr20:443253-443333 46 4.57e-04 TTGGCTTCGT CTGCGCTG TAGACTCTAC chr1:234736034-234736114 14 4.57e-04 CGCGCGGAGA CTGCGCTG CTCCAGCCCG chr2:38603406-38603486 17 4.57e-04 GAGGGATACA CTGCGCTG CCAACGCAAC chr1:41327966-41328046 2 6.10e-04 A CTGCGCAC CTTGCGGCCG chr19:34895230-34895310 54 6.10e-04 AGCGTTGCGC GTGCGCAG AGAGGCCGCC chr3:194208365-194208445 7 6.10e-04 ACTTCC CTCCGCAG AAGACTTATC chr4:106395148-106395228 31 6.10e-04 TGGGGCACCC GTGCGCAG CAGCCGCAGC chr14:64969721-64969801 54 6.10e-04 TATGCGCTGC CTCCGCAA CTGGTAACAA chr4:164087579-164087659 21 6.10e-04 GTGACGCAGT CTCCGCAG GCCGGCGATT chr19:38806711-38806791 23 6.10e-04 GGGCGGTGCC TTACGTAA GAGGCGGAGA chr1:78355073-78355153 46 6.10e-04 TTTACGAAGT TTACGTAG TTTAAGTGAG chr2:68478632-68478712 33 6.10e-04 CCCCGCAGGG CTGCGCAC CGCAGCTAAA chrX:55515434-55515514 46 6.10e-04 CATGGCCGCG GTGCGCAG TTAGCGCCCC chr2:64872375-64872455 19 6.10e-04 GGCTCTCCCG CTGCGCAC CGGCCGCGCG chr8:145690699-145690779 25 6.10e-04 GAGGCCAGCC GTGCGCAG TTACCGGGCT chr19:47808753-47808833 47 6.10e-04 GTAACGCAGA CTGCGCAC ATGGCTTCAA chr9:134510840-134510920 6 6.10e-04 ATGGG TTACGTAA ACAACGGTGA chr19:51843719-51843799 45 6.10e-04 GGCGTGGTCG CTGCGCAC AGGGCGCACG chr9:140008386-140008466 59 6.10e-04 GCTGCGTGGA CTGCGCAC CGAACGGCAG chr1:95538747-95538827 45 6.10e-04 TGCGCGGATT GTGCGCAG CTGCAGCCAA chr16:89884089-89884169 36 6.10e-04 ATTGTGTTGA TTacgtag atggcgtaga chr15:74220059-74220139 65 6.10e-04 CTACCTGCCG GTGCGCAG CTCCGACA chr9:32552579-32552659 66 6.10e-04 CTTCCGCTTC TTACGTAA GGGCTGC chr10:81838643-81838723 50 6.10e-04 GGGGACCAGA CTCCGCAA TGAGAGCAAG chr8:11205167-11205247 36 6.10e-04 TTTGCGCTGG GTGCGCAG GAAGGTCAGT chr10:128193455-12819353 8 7.27e-04 CCGGAAG TAACGCAA ATGCTCTGTG chr10:111985544-11198562 53 7.27e-04 TTTGCGAATC TTGCGGAA CGCAGGCGCC chr1:74663964-74664044 56 7.27e-04 CCAGCGAAAA TTGCGGAG GTTTTCCGAG chr18:55253769-55253849 65 7.27e-04 GCAGCCATGT TTGCGCCG AGTGAACG chr19:14640839-14640919 49 7.27e-04 TGCACAAATC TTGCGCCA CGCCGCCGTC chr15:66131981-66132061 8 7.27e-04 CCTGGAT CTACGTAA CTAGCCCATG chr7:36430026-36430106 58 7.27e-04 GATGTGTGAT TTGCGGAG TTCACGCAGC chr8:98656921-98657001 35 7.27e-04 GGGCCGCGGC TTGCGCCG GCGCCCGCAA chr10:124914579-12491465 46 7.27e-04 ACTGCGCCTT CTACGTAG GTGCCCTCCC chrX:23761474-23761554 15 9.09e-04 GAGTCCGCCT CTGCGGAG CTTCCCACTC chr2:113239521-113239601 66 9.09e-04 GTCTCCAACC CTgcgccg ccgccgc chr11:77532191-77532271 54 9.09e-04 GGGCAGAGCA CTGCGCCG TTTGGGAACG chr8:17013635-17013715 47 9.09e-04 GACCCCCGCC CTGCGCCA AGCGCGGAAG chr13:100258951-10025903 14 9.09e-04 GCTACGTCTG CTGCGGAG GGCGGCGCGC chr5:134802001-134802081 27 9.09e-04 GATCCGCCGT CTGCGCCG GTGCGGGACT chr15:57620830-57620910 55 9.09e-04 CCCTCGcttc ctgcgccg cagtttgctt chr1:155100324-155100404 50 9.09e-04 CCAGCGCTGA CTGCGCCG CGGAGAAAGC chr8:121135935-121136015 11 9.09e-04 TCCTAAAAAG CTGCGCCG GCCGCCTGGC chr4:8594407-8594487 55 9.09e-04 GGCGCCCTCC CTGCGCCG GGGGCGGGAG chr1:156818723-156818803 53 9.74e-04 ATAGCGCTCC CAGCGTAG CAGGATGCGG chr19:1841251-1841331 32 9.74e-04 ACTGCGCGGA CAGCGTAA GGAACAAGCC chr20:52225393-52225473 54 1.07e-03 gcacatggcg atacgcaa taaacgtCCG chr10:103347765-10334784 39 1.07e-03 TGTACGCAGC TGGCGCAG GCCAGGGAAT chr6:74363841-74363921 22 1.07e-03 CTCGTAGGAT TGGCGCAA AGTGAGCCCG chr4:1005948-1006028 1 1.07e-03 . TGGCGCAG GCGATTATCT chr4:187125543-187125623 59 1.07e-03 GGTGGAGACG TTACGCTG GCGTAAGAGG chr9:138798338-138798418 27 1.07e-03 AATGCGCGGA ATACGCAA TTTCTAGTTG chr3:129024545-129024625 12 1.07e-03 AGAACGCTCC TGGCGCAG CACCGTTGGC chr11:22850920-22851000 47 1.23e-03 TATGAAGATC CGGCGCAG CTAAAGTCAG chr17:48227415-48227495 52 1.23e-03 GGTGCGGCGG CGGCGCAG GCTGCGCGGA chr5:141468577-141468657 26 1.23e-03 tgtgctcaaa ctgcgtat ctttaactta chr1:22109123-22109203 49 1.23e-03 GTCGCGCAGA CGGCGCAA AGGGGGAAAC chr1:8763140-8763220 66 1.23e-03 CGGAAAGGGG CGGCGCAG GCGGGCA chr17:18266928-18267008 16 1.23e-03 CTATTGGCTG CGGCGCAG CGGCGGGCAG chr9:136324800-136324880 41 1.23e-03 CCCCCGCCCC CTACGCTA ATGACGCCCG chr19:14184602-14184682 33 1.23e-03 GCAGCGCCAG CGGCGCAG CGTCTATGGC chr5:77541043-77541123 26 1.33e-03 aagggaggca atgcgtaa taggcgtaat chr9:140571062-140571142 27 1.50e-03 ccgcaagcct ttacgcca aatgcttttg chr19:6741080-6741160 39 1.50e-03 TGGAACAGGC TTACGCCA AACAACTGCG chr8:8559243-8559323 5 1.50e-03 CTAT AAGCGCAG GGTCGACGGG chr5:114962055-114962135 38 1.50e-03 gcTGGGAACT TAGCGCTG GGGAGCATCT chr18:51750949-51751029 12 1.50e-03 GCTGCGCTTC TTCCGTAA CCGAGCCCTT chr2:27069351-27069431 13 1.50e-03 CTTAAGCAAA AAGCGCAG CACCGCCCGC chr19:40030810-40030890 58 1.77e-03 CATAGATTCT TACCGCAA ACCCTGGGAG chr1:85039961-85040041 66 1.77e-03 gcagcgccag cagcgcTA GACCCGG chr3:110240031-110240111 52 1.77e-03 GCAGCGGAAA CTACGGAA ACATAGGAAA chr1:91082146-91082226 38 1.77e-03 CTGGGAGCAA CTACGGAA TATTCTACAC chr15:34875847-34875927 19 1.77e-03 GGCGGGTACA TACCGCAA GCGGAGTACG chr5:137089033-137089113 17 1.77e-03 ccgccgccgc ctccgtag gcattgtagc chr16:68323716-68323796 21 1.77e-03 CAACCATAGC TACCGCAA GTAGAGCAGC chr3:45187552-45187632 10 1.77e-03 GCATTTTGA CTACGCCG TCCCCGCCCT chr6:10419393-10419473 62 1.97e-03 TTGCGCCCAG CACCGCAG TCGCTGCCTG chr1:6484520-6484600 26 1.97e-03 ACCTCTGGAA TTGCGTCG CCGGCGCCTG chr2:157190461-157190541 17 1.97e-03 GCCACGCCGA GAGCGCAG GGAGCTTTCT chr7:142552457-142552537 31 1.97e-03 GGTCCGCCAG TTGCGCTT CGCTCCGCGG chr7:26242434-26242514 17 1.97e-03 ATGTAGGTAG GAGCGCAG ATCTACTCTG chr2:111906600-111906680 36 1.97e-03 TACAGTAAGT TAACGTAA GTCACACGTG chr10:97055113-97055193 44 1.97e-03 CACCGCGGCC GAGCGCAG ATCGCGCACC chr9:102582441-102582521 27 2.16e-03 GTAACATCGC CTGCGTCA ATCACGCGCC chr1:113421077-113421157 30 2.16e-03 CCCATGACCG CTGCGTCA TTTACTTATC chr2:234776970-234777050 59 2.16e-03 GGCGCACACG TAGCGCCG GCTGCGCGAC chr20:52225193-52225273 29 2.42e-03 TCACCGCTTC CAGCGGAG GGCTTAAAGC chr8:55383136-55383216 15 2.42e-03 CCCACGCAGC CAGCGGAG TCTCCTGGGA chr22:25843996-25844076 3 2.42e-03 TG GTGCGCAT GCGTGTTCTC chr2:176995206-176995286 56 2.42e-03 TCTATGGCAA CAGCGCCG CCGGCTTCCC chr10:88281476-88281556 23 2.61e-03 TCAACGCCAT TTGCGCTC CCGGCCCCCA chr12:6603400-6603480 59 2.61e-03 AGTCTGACAG ATCCGCAA CGGAAGTTGT chr8:11660652-11660732 38 2.61e-03 TTCCCGGTGG TTGCGCTC CCCGTTTCGT chrX:150250905-150250985 4 2.61e-03 CGC CGACGCAG GAAAGCACGC chr7:156741470-156741550 14 2.88e-03 GAGGCTGCTC CTGCGCCT CCGGGCTTCC chr9:124976284-124976364 50 2.88e-03 CCTGCGCGAA CTGCGCCT GCATAACCTG chr9:26892449-26892529 20 2.88e-03 CCGGCGCTCG CTGCGCTC CAcgctgctc chr12:56137308-56137388 12 2.88e-03 CAGCCGCGAG CTGCGCCT AGAGAGCATC chr3:168960231-168960311 8 2.88e-03 CTCCACT CTCCGCTG ATAACGCTCC chr16:30006517-30006597 59 2.88e-03 TGCACCAAGG CTGCGCTC ACCGCGCCCC chr9:7799758-7799838 20 2.88e-03 TGGTTCAAAC TGGCGTAA ACGACGCACC chr6:42420196-42420276 27 2.88e-03 CTTCGCGGCG GTGCGCTG CTGACTTTAT chr6:28778225-28778305 6 2.88e-03 CGCCT CTCCGCTA TTTCCGTCGC chr2:152042639-152042719 20 2.88e-03 GCCGATCCCG CTCCGCTG GTTCCGCACG chr2:54013520-54013600 23 3.24e-03 ATTCGGAGGC TTGCGGTA TTCACCTACG chr19:58446730-58446810 54 3.24e-03 ACTACGTTAC GTGCGCAC ACAGAAACGC chr18:7566752-7566832 29 3.24e-03 GCTCCGCCCG CGGCGTAG AGAAGCTCGC chr20:443540-443620 58 3.24e-03 TGTCAtacgg gtccgcag gttatgcact chr9:129428873-129428953 21 3.24e-03 TCTATGTGCT TTACGTAC GTGCTTTACG chr19:10829099-10829179 63 3.24e-03 CGTGCGCCGC CGGCGTAA CTGCGGCGCT chr19:49436809-49436889 54 3.24e-03 CAACGAGAAT CGGCGTAG GCGCAATACG chr17:8060147-8060227 7 3.51e-03 CGGTGG CAGCGTAT AAGGCGCACT chr11:113185440-11318552 61 3.51e-03 GGCCCGGGAC TTGCGGAC GCCTGGGAGC chr1:213218699-213218779 42 3.51e-03 tgtgctcaaa cagcgtat ctttaactat chr8:22842849-22842929 37 3.51e-03 tgtgctcaaa cagcgtat ctttaactta chr3:140661384-140661464 50 4.09e-03 GGGGCGGAAA GTGCGGAG GCTGAGGACA chr14:39736261-39736341 34 4.09e-03 TCTGCGAAGC TTGCGCGA AGAAGGGGAA chr16:58018752-58018832 41 4.09e-03 CTGCGGACGG GAACGCAG GCGGCGGGCC chr7:92157180-92157260 32 4.09e-03 CCGACAGGGG CTCCGCCA ACAACTCTGC chr10:2357328-2357408 59 4.09e-03 TGTGCGTCCC CTCCGGAA GGACTGGGCG chrX:107019410-107019490 58 4.09e-03 ATGGCGCATC CTCCGCCA GAAATACGCA chr5:122181503-122181583 25 4.09e-03 AGAGGAAGGG CTGCGCCC TTGGCGCGGT chr4:154073328-154073408 68 4.09e-03 AGAACAGGCT CTCCGGAG TTTCC chr14:97207840-97207920 32 4.42e-03 CCCGCAGGCC CTACGCTT TTTGCGTTTC chr1:1004637-1004717 51 4.83e-03 TTCACGTACC TGGCGCTG CAGCGGCACA chr21:45158575-45158655 18 4.83e-03 taagttaaag atacgctg tttgagcaca chr4:160024221-160024301 35 4.83e-03 CGGCCggaga aggcgcag gaggaggaag chr2:64751900-64751980 22 4.83e-03 CTGCTCTCTT CTGCGGCG AGTGCGGGAA chr21:45118624-45118704 39 4.83e-03 taagttaaag atacgctg tttgagcaca chr13:50018539-50018619 41 4.83e-03 CCAGCCTTGC CAACGGAG CTGGCGGAGC chr1:1961651-1961731 18 4.83e-03 GCTGTGTTCC CTGCGGCG TTTGCGGCCG chr5:76788240-76788320 59 4.83e-03 GCGGGGGCGG CTGCGGCG ATTGCGGGGC chr1:33896076-33896156 49 4.83e-03 CAAGCGGAGC AGGCGCAG GCCGCGCAAG chr7:44349381-44349461 29 4.83e-03 CCGACGCCAG CACCGTAG GGGCCGCACT chr6:112408723-112408803 15 5.12e-03 GTCACGCTAC TGCCGCAA GCCTCTGCCG chrX:52950074-52950154 7 5.12e-03 GTTTTC CGGCGCTA CAGGAACTTC chr3:137906013-137906093 34 5.12e-03 GTAAAACTCG TAGCGTCA GGGCGAGACT chr6:166797077-166797157 45 5.62e-03 GAGGGAGCCG CAGCGTCG GAGGAGGAAA chr21:45118857-45118937 62 5.62e-03 cgaacttcgg gtacgctg tgggtggtgt chr10:103929391-10392947 65 5.62e-03 ttgaagagcc gggcgcag tggctcac chr4:1243222-1243302 57 5.62e-03 CGCTCCTCCG CGCCGCAG CCGCAGCCGC chr3:44518909-44518989 50 5.62e-03 CCCCCGCCAC GGGCGCAG CCTCCAGGCC chr14:89029326-89029406 19 6.05e-03 CGGGGCGGGG ATACGCCG TGTGCGCGGC chr11:63448702-63448782 59 6.05e-03 GATACGCCTT TTGCGTCT GGTCCCCAAG chr9:103361113-103361193 68 6.05e-03 GCCACATGAA AAGCGCTA ATGGC chr13:79980423-79980503 17 6.62e-03 GACGTAAGGT CGGCGGAG AATGCGCGGG chr1:86861710-86861790 2 6.62e-03 C TTACGCCC CCGCCGCTGC chr8:144660253-144660333 39 6.62e-03 GGCGCGCAGG AAGCGCAC ACAGTCGCGC chr2:208489375-208489455 54 6.62e-03 ACTACACAAG CGGCGGAA GCGGCGGTGA chr22:31064135-31064215 36 6.62e-03 TTTACGGGAC CGGCGCCA CCTCGGGCTC chr19:36360628-36360708 28 7.15e-03 ACCAGACCCA CAGCGCTC TCGACGCTGT chr22:39941949-39942029 7 7.59e-03 GAGGCG AAGCGGAA TTCAGCACCA chrX:119587997-119588077 27 7.59e-03 tccagtatat caacgttg tctacactat chr2:23806437-23806517 10 8.15e-03 AGGAGCTGG GTGCGTCA TTTACGTGCA chr3:80819489-80819569 35 8.15e-03 GCGCTCCTCT CAACGTAC GTGCGCTCCT chr3:80819704-80819784 20 8.15e-03 GCGCTCCTCT CAACGTAC GTGCGCTCCT chrX:149106753-149106833 22 8.90e-03 cacgcctata caccgcca aatcgctagg chr19:35596843-35596923 57 8.90e-03 ccaccgttat caccgccg tgaccacgcc chrX:100075222-100075302 15 9.36e-03 GCCCTCCGGT GGACGCAA CTCGCGCCTG chr15:51915163-51915243 21 1.00e-02 TCACCCGCGT TTGCGCGT GCGCGCGCCG chr9:34628984-34629064 25 1.00e-02 GGTCCCGGCG GTGCGCTC CCGCCGCCCT chr18:13727034-13727114 39 1.07e-02 GAACCAGAGG TTGAGTAA CAGGCCGCGC chr6:80816336-80816416 13 1.21e-02 TCCTCGGGTG CTCCGCCC TCCCCGCAGG chr3:111697880-111697960 36 1.21e-02 AAGATGGCGG TTGCGCGC TTGGCAGCTG chr16:68298823-68298903 28 1.28e-02 GGGACGCTGA GTGCGCGG GCCGCGCCGC chr18:9135926-9136006 62 1.37e-02 GTCAATTTTC CTCCGGCA CCCTTCCTAG chr2:86669340-86669420 67 1.37e-02 GTTACCGTGG TAACGCGA CCATCG chr3:119813410-119813490 71 1.37e-02 GCCGAAGCCC GAACGGAG CC chr5:56111494-56111574 36 1.44e-02 CGCGGGACTG CTGCGGGA GGCGGGCAGC chr2:149403283-149403363 41 1.44e-02 GAGCGGGTCG TAGCGTCC GAGGGCCGCC chr13:38211014-38211094 5 1.98e-02 TGGT AAACGCTT CCTCCTTCAA chr16:1386131-1386211 54 1.98e-02 ACAGCTCCAG CAGCGGCT GCTCCACTGG chr19:38085560-38085640 32 2.72e-02 ACTTTTTCGA TGAAGCAA CCCAAAAGCT chr6:80247191-80247271 71 2.83e-02 GGGACGGCGA GTGCGGGA GA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:48272015-48272095 3e-05 8_[+1]_64 chr12:30908077-30908157 3e-05 2_[+1]_70 chr12:110700762-11070084 3e-05 24_[+1]_48 chr1:25558593-25558673 3e-05 26_[+1]_46 chr7:77168084-77168164 3e-05 49_[+1]_23 chr10:94351487-94351567 3e-05 16_[+1]_56 chr14:32672353-32672433 3e-05 52_[+1]_20 chr18:55785447-55785527 3e-05 57_[+1]_15 chr18:3248179-3248259 3e-05 58_[+1]_14 chr9:38068295-38068375 3e-05 33_[+1]_39 chr6:13487512-13487592 3e-05 37_[+1]_35 chr1:36593936-36594016 3e-05 32_[+1]_40 chr2:85914490-85914570 3e-05 31_[+1]_41 chr10:93668367-93668447 3e-05 3_[+1]_69 chr9:137000830-137000910 8.4e-05 51_[+1]_21 chr1:27692747-27692827 8.4e-05 63_[+1]_9 chr5:34008258-34008338 8.4e-05 14_[+1]_58 chr3:146262343-146262423 8.4e-05 13_[+1]_59 chrX:44402190-44402270 8.4e-05 62_[+1]_10 chr11:65123143-65123223 8.4e-05 19_[+1]_53 chr11:72533272-72533352 8.4e-05 45_[+1]_27 chr19:12958633-12958713 8.4e-05 32_[+1]_40 chr10:112257889-11225796 8.4e-05 20_[+1]_52 chr3:122640805-122640885 8.4e-05 55_[+1]_17 chr13:29292947-29293027 8.4e-05 57_[+1]_15 chr9:5450480-5450560 8.4e-05 65_[+1]_7 chr4:144105738-144105818 8.4e-05 47_[+1]_25 chr11:60673626-60673706 8.4e-05 31_[+1]_41 chr6:79943407-79943487 8.4e-05 2_[+1]_70 chr13:22245185-22245265 8.4e-05 49_[+1]_23 chr5:173846658-173846738 8.4e-05 23_[+1]_49 chr14:67708342-67708422 8.4e-05 14_[+1]_58 chr4:113444344-113444424 8.4e-05 40_[+1]_32 chr9:117160979-117161059 0.0001 72_[+1] chr19:38806460-38806540 0.0001 44_[+1]_28 chrX:129299723-129299803 0.0001 15_[+1]_57 chr20:60719534-60719614 0.0001 24_[+1]_48 chrX:108780669-108780749 0.0001 55_[+1]_17 chr17:7145918-7145998 0.00013 11_[+1]_61 chr12:44152601-44152681 0.00013 50_[+1]_22 chr9:140173211-140173291 0.00013 44_[+1]_28 chr3:52091578-52091658 0.00015 69_[+1]_3 chr3:145968550-145968630 0.00021 54_[+1]_18 chr1:6662289-6662369 0.00021 37_[+1]_35 chrX:47092906-47092986 0.00021 3_[+1]_69 chr2:198363696-198363776 0.00021 49_[+1]_23 chr17:11900630-11900710 0.00021 58_[+1]_14 chr3:121554069-121554149 0.00021 68_[+1]_4 chr14:74226120-74226200 0.00021 44_[+1]_28 chr19:54974901-54974981 0.00021 50_[+1]_22 chr19:20012037-20012117 0.00021 34_[+1]_38 chr11:124746289-12474636 0.00027 39_[+1]_33 chr17:1588108-1588188 0.00027 [+1]_72 chr22:19946811-19946891 0.00027 58_[+1]_14 chr6:130339637-130339717 0.00027 50_[+1]_22 chr22:47133913-47133993 0.00027 31_[+1]_41 chr7:8301831-8301911 0.00027 71_[+1]_1 chr7:157130598-157130678 0.00027 47_[+1]_25 chr13:32420880-32420960 0.00027 43_[+1]_29 chr10:7210504-7210584 0.00027 25_[+1]_47 chr12:7013984-7014064 0.00028 72_[+1] chr8:21777043-21777123 0.0003 43_[+1]_29 chr22:19868862-19868942 0.0003 19_[+1]_53 chr17:7660448-7660528 0.0003 57_[+1]_15 chr11:33280236-33280316 0.00036 53_[+1]_19 chr20:62084781-62084861 0.00036 24_[+1]_48 chr2:113470962-113471042 0.00036 60_[+1]_12 chr22:41417926-41418006 0.00046 30_[+1]_42 chr13:26795632-26795712 0.00046 19_[+1]_53 chr4:87856202-87856282 0.00046 53_[+1]_19 chr14:21131453-21131533 0.00046 22_[+1]_50 chr1:10458550-10458630 0.00046 1_[+1]_71 chr9:126031235-126031315 0.00046 2_[+1]_70 chr7:100253961-100254041 0.00046 24_[+1]_48 chr17:7339133-7339213 0.00046 30_[+1]_42 chr11:76082320-76082400 0.00046 17_[+1]_55 chr20:443253-443333 0.00046 45_[+1]_27 chr1:234736034-234736114 0.00046 13_[+1]_59 chr2:38603406-38603486 0.00046 16_[+1]_56 chr1:41327966-41328046 0.00061 1_[+1]_71 chr19:34895230-34895310 0.00061 53_[+1]_19 chr3:194208365-194208445 0.00061 6_[+1]_66 chr4:106395148-106395228 0.00061 30_[+1]_42 chr14:64969721-64969801 0.00061 53_[+1]_19 chr4:164087579-164087659 0.00061 20_[+1]_52 chr19:38806711-38806791 0.00061 22_[+1]_50 chr1:78355073-78355153 0.00061 45_[+1]_27 chr2:68478632-68478712 0.00061 32_[+1]_40 chrX:55515434-55515514 0.00061 45_[+1]_27 chr2:64872375-64872455 0.00061 18_[+1]_54 chr8:145690699-145690779 0.00061 24_[+1]_48 chr19:47808753-47808833 0.00061 46_[+1]_26 chr9:134510840-134510920 0.00061 5_[+1]_67 chr19:51843719-51843799 0.00061 44_[+1]_28 chr9:140008386-140008466 0.00061 58_[+1]_14 chr1:95538747-95538827 0.00061 44_[+1]_28 chr16:89884089-89884169 0.00061 35_[+1]_37 chr15:74220059-74220139 0.00061 64_[+1]_8 chr9:32552579-32552659 0.00061 65_[+1]_7 chr10:81838643-81838723 0.00061 49_[+1]_23 chr8:11205167-11205247 0.00061 35_[+1]_37 chr10:128193455-12819353 0.00073 7_[+1]_65 chr10:111985544-11198562 0.00073 52_[+1]_20 chr1:74663964-74664044 0.00073 55_[+1]_17 chr18:55253769-55253849 0.00073 64_[+1]_8 chr19:14640839-14640919 0.00073 48_[+1]_24 chr15:66131981-66132061 0.00073 7_[+1]_65 chr7:36430026-36430106 0.00073 57_[+1]_15 chr8:98656921-98657001 0.00073 34_[+1]_38 chr10:124914579-12491465 0.00073 45_[+1]_27 chrX:23761474-23761554 0.00091 14_[+1]_58 chr2:113239521-113239601 0.00091 65_[+1]_7 chr11:77532191-77532271 0.00091 53_[+1]_19 chr8:17013635-17013715 0.00091 46_[+1]_26 chr13:100258951-10025903 0.00091 13_[+1]_59 chr5:134802001-134802081 0.00091 26_[+1]_46 chr15:57620830-57620910 0.00091 54_[+1]_18 chr1:155100324-155100404 0.00091 49_[+1]_23 chr8:121135935-121136015 0.00091 10_[+1]_62 chr4:8594407-8594487 0.00091 54_[+1]_18 chr1:156818723-156818803 0.00097 52_[+1]_20 chr19:1841251-1841331 0.00097 31_[+1]_41 chr20:52225393-52225473 0.0011 53_[+1]_19 chr10:103347765-10334784 0.0011 38_[+1]_34 chr6:74363841-74363921 0.0011 21_[+1]_51 chr4:1005948-1006028 0.0011 [+1]_72 chr4:187125543-187125623 0.0011 58_[+1]_14 chr9:138798338-138798418 0.0011 26_[+1]_46 chr3:129024545-129024625 0.0011 11_[+1]_61 chr11:22850920-22851000 0.0012 46_[+1]_26 chr17:48227415-48227495 0.0012 51_[+1]_21 chr5:141468577-141468657 0.0012 25_[+1]_47 chr1:22109123-22109203 0.0012 48_[+1]_24 chr1:8763140-8763220 0.0012 65_[+1]_7 chr17:18266928-18267008 0.0012 15_[+1]_57 chr9:136324800-136324880 0.0012 40_[+1]_32 chr19:14184602-14184682 0.0012 32_[+1]_40 chr5:77541043-77541123 0.0013 25_[+1]_47 chr9:140571062-140571142 0.0015 26_[+1]_46 chr19:6741080-6741160 0.0015 38_[+1]_34 chr8:8559243-8559323 0.0015 4_[+1]_68 chr5:114962055-114962135 0.0015 37_[+1]_35 chr18:51750949-51751029 0.0015 11_[+1]_61 chr2:27069351-27069431 0.0015 12_[+1]_60 chr19:40030810-40030890 0.0018 57_[+1]_15 chr1:85039961-85040041 0.0018 65_[+1]_7 chr3:110240031-110240111 0.0018 51_[+1]_21 chr1:91082146-91082226 0.0018 37_[+1]_35 chr15:34875847-34875927 0.0018 18_[+1]_54 chr5:137089033-137089113 0.0018 16_[+1]_56 chr16:68323716-68323796 0.0018 20_[+1]_52 chr3:45187552-45187632 0.0018 9_[+1]_63 chr6:10419393-10419473 0.002 61_[+1]_11 chr1:6484520-6484600 0.002 25_[+1]_47 chr2:157190461-157190541 0.002 16_[+1]_56 chr7:142552457-142552537 0.002 30_[+1]_42 chr7:26242434-26242514 0.002 16_[+1]_56 chr2:111906600-111906680 0.002 35_[+1]_37 chr10:97055113-97055193 0.002 43_[+1]_29 chr9:102582441-102582521 0.0022 26_[+1]_46 chr1:113421077-113421157 0.0022 29_[+1]_43 chr2:234776970-234777050 0.0022 58_[+1]_14 chr20:52225193-52225273 0.0024 28_[+1]_44 chr8:55383136-55383216 0.0024 14_[+1]_58 chr22:25843996-25844076 0.0024 2_[+1]_70 chr2:176995206-176995286 0.0024 55_[+1]_17 chr10:88281476-88281556 0.0026 22_[+1]_50 chr12:6603400-6603480 0.0026 58_[+1]_14 chr8:11660652-11660732 0.0026 37_[+1]_35 chrX:150250905-150250985 0.0026 3_[+1]_69 chr7:156741470-156741550 0.0029 13_[+1]_59 chr9:124976284-124976364 0.0029 49_[+1]_23 chr9:26892449-26892529 0.0029 19_[+1]_53 chr12:56137308-56137388 0.0029 11_[+1]_61 chr3:168960231-168960311 0.0029 7_[+1]_65 chr16:30006517-30006597 0.0029 58_[+1]_14 chr9:7799758-7799838 0.0029 19_[+1]_53 chr6:42420196-42420276 0.0029 26_[+1]_46 chr6:28778225-28778305 0.0029 5_[+1]_67 chr2:152042639-152042719 0.0029 19_[+1]_53 chr2:54013520-54013600 0.0032 22_[+1]_50 chr19:58446730-58446810 0.0032 53_[+1]_19 chr18:7566752-7566832 0.0032 28_[+1]_44 chr20:443540-443620 0.0032 57_[+1]_15 chr9:129428873-129428953 0.0032 20_[+1]_52 chr19:10829099-10829179 0.0032 62_[+1]_10 chr19:49436809-49436889 0.0032 53_[+1]_19 chr17:8060147-8060227 0.0035 6_[+1]_66 chr11:113185440-11318552 0.0035 60_[+1]_12 chr1:213218699-213218779 0.0035 41_[+1]_31 chr8:22842849-22842929 0.0035 36_[+1]_36 chr3:140661384-140661464 0.0041 49_[+1]_23 chr14:39736261-39736341 0.0041 33_[+1]_39 chr16:58018752-58018832 0.0041 40_[+1]_32 chr7:92157180-92157260 0.0041 31_[+1]_41 chr10:2357328-2357408 0.0041 58_[+1]_14 chrX:107019410-107019490 0.0041 57_[+1]_15 chr5:122181503-122181583 0.0041 24_[+1]_48 chr4:154073328-154073408 0.0041 67_[+1]_5 chr14:97207840-97207920 0.0044 31_[+1]_41 chr1:1004637-1004717 0.0048 50_[+1]_22 chr21:45158575-45158655 0.0048 17_[+1]_55 chr4:160024221-160024301 0.0048 34_[+1]_38 chr2:64751900-64751980 0.0048 21_[+1]_51 chr21:45118624-45118704 0.0048 38_[+1]_34 chr13:50018539-50018619 0.0048 40_[+1]_32 chr1:1961651-1961731 0.0048 17_[+1]_55 chr5:76788240-76788320 0.0048 58_[+1]_14 chr1:33896076-33896156 0.0048 48_[+1]_24 chr7:44349381-44349461 0.0048 28_[+1]_44 chr6:112408723-112408803 0.0051 14_[+1]_58 chrX:52950074-52950154 0.0051 6_[+1]_66 chr3:137906013-137906093 0.0051 33_[+1]_39 chr6:166797077-166797157 0.0056 44_[+1]_28 chr21:45118857-45118937 0.0056 61_[+1]_11 chr10:103929391-10392947 0.0056 64_[+1]_8 chr4:1243222-1243302 0.0056 56_[+1]_16 chr3:44518909-44518989 0.0056 49_[+1]_23 chr14:89029326-89029406 0.006 18_[+1]_54 chr11:63448702-63448782 0.006 58_[+1]_14 chr9:103361113-103361193 0.006 67_[+1]_5 chr13:79980423-79980503 0.0066 16_[+1]_56 chr1:86861710-86861790 0.0066 1_[+1]_71 chr8:144660253-144660333 0.0066 38_[+1]_34 chr2:208489375-208489455 0.0066 53_[+1]_19 chr22:31064135-31064215 0.0066 35_[+1]_37 chr19:36360628-36360708 0.0072 27_[+1]_45 chr22:39941949-39942029 0.0076 6_[+1]_66 chrX:119587997-119588077 0.0076 26_[+1]_46 chr2:23806437-23806517 0.0082 9_[+1]_63 chr3:80819489-80819569 0.0082 34_[+1]_38 chr3:80819704-80819784 0.0082 19_[+1]_53 chrX:149106753-149106833 0.0089 21_[+1]_51 chr19:35596843-35596923 0.0089 56_[+1]_16 chrX:100075222-100075302 0.0094 14_[+1]_58 chr15:51915163-51915243 0.01 20_[+1]_52 chr9:34628984-34629064 0.01 24_[+1]_48 chr18:13727034-13727114 0.011 38_[+1]_34 chr6:80816336-80816416 0.012 12_[+1]_60 chr3:111697880-111697960 0.012 35_[+1]_37 chr16:68298823-68298903 0.013 27_[+1]_45 chr18:9135926-9136006 0.014 61_[+1]_11 chr2:86669340-86669420 0.014 66_[+1]_6 chr3:119813410-119813490 0.014 70_[+1]_2 chr5:56111494-56111574 0.014 35_[+1]_37 chr2:149403283-149403363 0.014 40_[+1]_32 chr13:38211014-38211094 0.02 4_[+1]_68 chr16:1386131-1386211 0.02 53_[+1]_19 chr19:38085560-38085640 0.027 31_[+1]_41 chr6:80247191-80247271 0.028 70_[+1]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YTGCGCAR width=8 seqs=250 chr4:48272015-48272095 ( 9) TTGCGCAG 1 chr12:30908077-30908157 ( 3) TTGCGCAG 1 chr12:110700762-11070084 ( 25) TTGCGCAA 1 chr1:25558593-25558673 ( 27) TTGCGCAG 1 chr7:77168084-77168164 ( 50) TTGCGCAA 1 chr10:94351487-94351567 ( 17) TTGCGCAG 1 chr14:32672353-32672433 ( 53) TTGCGCAG 1 chr18:55785447-55785527 ( 58) TTGCGCAG 1 chr18:3248179-3248259 ( 59) TTGCGCAA 1 chr9:38068295-38068375 ( 34) TTGCGCAG 1 chr6:13487512-13487592 ( 38) TTGCGCAG 1 chr1:36593936-36594016 ( 33) TTGCGCAG 1 chr2:85914490-85914570 ( 32) TTGCGCAA 1 chr10:93668367-93668447 ( 4) TTGCGCAG 1 chr9:137000830-137000910 ( 52) CTGCGCAG 1 chr1:27692747-27692827 ( 64) CTGCGCAG 1 chr5:34008258-34008338 ( 15) CTGCGCAA 1 chr3:146262343-146262423 ( 14) CTGCGCAA 1 chrX:44402190-44402270 ( 63) CTGCGCAG 1 chr11:65123143-65123223 ( 20) CTGCGCAA 1 chr11:72533272-72533352 ( 46) CTGCGCAA 1 chr19:12958633-12958713 ( 33) CTGCGCAG 1 chr10:112257889-11225796 ( 21) CTGCGCAA 1 chr3:122640805-122640885 ( 56) CTGCGCAG 1 chr13:29292947-29293027 ( 58) CTGCGCAG 1 chr9:5450480-5450560 ( 66) CTGCGCAG 1 chr4:144105738-144105818 ( 48) CTGCGCAG 1 chr11:60673626-60673706 ( 32) CTGCGCAA 1 chr6:79943407-79943487 ( 3) CTGCGCAG 1 chr13:22245185-22245265 ( 50) CTGCGCAG 1 chr5:173846658-173846738 ( 24) CTGCGCAG 1 chr14:67708342-67708422 ( 15) CTGCGCAA 1 chr4:113444344-113444424 ( 41) CTGCGCAA 1 chr9:117160979-117161059 ( 73) TTACGCAA 1 chr19:38806460-38806540 ( 45) TTACGCAG 1 chrX:129299723-129299803 ( 16) TTACGCAG 1 chr20:60719534-60719614 ( 25) TTACGCAG 1 chrX:108780669-108780749 ( 56) TTACGCAA 1 chr17:7145918-7145998 ( 12) CTACGCAG 1 chr12:44152601-44152681 ( 51) CTACGCAA 1 chr9:140173211-140173291 ( 45) CTACGCAA 1 chr3:52091578-52091658 ( 70) TTGCGTAG 1 chr3:145968550-145968630 ( 55) TAGCGCAG 1 chr1:6662289-6662369 ( 38) TAGCGCAG 1 chrX:47092906-47092986 ( 4) CTGCGTAG 1 chr2:198363696-198363776 ( 50) TAGCGCAA 1 chr17:11900630-11900710 ( 59) TAGCGCAA 1 chr3:121554069-121554149 ( 69) TAGCGCAG 1 chr14:74226120-74226200 ( 45) CTGCGTAG 1 chr19:54974901-54974981 ( 51) CTGCGTAA 1 chr19:20012037-20012117 ( 35) TAGCGCAG 1 chr11:124746289-12474636 ( 40) CAGCGCAA 1 chr17:1588108-1588188 ( 1) CAGCGCAA 1 chr22:19946811-19946891 ( 59) CAGCGCAG 1 chr6:130339637-130339717 ( 51) CAGCGCAG 1 chr22:47133913-47133993 ( 32) CAGCGCAG 1 chr7:8301831-8301911 ( 72) CAGCGCAG 1 chr7:157130598-157130678 ( 48) CAGCGCAA 1 chr13:32420880-32420960 ( 44) CAGCGCAG 1 chr10:7210504-7210584 ( 26) CAGCGCAA 1 chr12:7013984-7014064 ( 73) TTGCGCAT 1 chr8:21777043-21777123 ( 44) CTGCGCAT 1 chr22:19868862-19868942 ( 20) CTGCGCAT 1 chr17:7660448-7660528 ( 58) CTGCGCAT 1 chr11:33280236-33280316 ( 54) TTGCGCTG 1 chr20:62084781-62084861 ( 25) ATGCGCAG 1 chr2:113470962-113471042 ( 61) ATGCGCAG 1 chr22:41417926-41418006 ( 31) TTCCGCAG 1 chr13:26795632-26795712 ( 20) TTCCGCAA 1 chr4:87856202-87856282 ( 54) TTCCGCAG 1 chr14:21131453-21131533 ( 23) TTCCGCAA 1 chr1:10458550-10458630 ( 2) CTGCGCTG 1 chr9:126031235-126031315 ( 3) CTGCGCTG 1 chr7:100253961-100254041 ( 25) CTGCGCTG 1 chr17:7339133-7339213 ( 31) TTCCGCAG 1 chr11:76082320-76082400 ( 18) CTGCGCTG 1 chr20:443253-443333 ( 46) CTGCGCTG 1 chr1:234736034-234736114 ( 14) CTGCGCTG 1 chr2:38603406-38603486 ( 17) CTGCGCTG 1 chr1:41327966-41328046 ( 2) CTGCGCAC 1 chr19:34895230-34895310 ( 54) GTGCGCAG 1 chr3:194208365-194208445 ( 7) CTCCGCAG 1 chr4:106395148-106395228 ( 31) GTGCGCAG 1 chr14:64969721-64969801 ( 54) CTCCGCAA 1 chr4:164087579-164087659 ( 21) CTCCGCAG 1 chr19:38806711-38806791 ( 23) TTACGTAA 1 chr1:78355073-78355153 ( 46) TTACGTAG 1 chr2:68478632-68478712 ( 33) CTGCGCAC 1 chrX:55515434-55515514 ( 46) GTGCGCAG 1 chr2:64872375-64872455 ( 19) CTGCGCAC 1 chr8:145690699-145690779 ( 25) GTGCGCAG 1 chr19:47808753-47808833 ( 47) CTGCGCAC 1 chr9:134510840-134510920 ( 6) TTACGTAA 1 chr19:51843719-51843799 ( 45) CTGCGCAC 1 chr9:140008386-140008466 ( 59) CTGCGCAC 1 chr1:95538747-95538827 ( 45) GTGCGCAG 1 chr16:89884089-89884169 ( 36) TTACGTAG 1 chr15:74220059-74220139 ( 65) GTGCGCAG 1 chr9:32552579-32552659 ( 66) TTACGTAA 1 chr10:81838643-81838723 ( 50) CTCCGCAA 1 chr8:11205167-11205247 ( 36) GTGCGCAG 1 chr10:128193455-12819353 ( 8) TAACGCAA 1 chr10:111985544-11198562 ( 53) TTGCGGAA 1 chr1:74663964-74664044 ( 56) TTGCGGAG 1 chr18:55253769-55253849 ( 65) TTGCGCCG 1 chr19:14640839-14640919 ( 49) TTGCGCCA 1 chr15:66131981-66132061 ( 8) CTACGTAA 1 chr7:36430026-36430106 ( 58) TTGCGGAG 1 chr8:98656921-98657001 ( 35) TTGCGCCG 1 chr10:124914579-12491465 ( 46) CTACGTAG 1 chrX:23761474-23761554 ( 15) CTGCGGAG 1 chr2:113239521-113239601 ( 66) CTGCGCCG 1 chr11:77532191-77532271 ( 54) CTGCGCCG 1 chr8:17013635-17013715 ( 47) CTGCGCCA 1 chr13:100258951-10025903 ( 14) CTGCGGAG 1 chr5:134802001-134802081 ( 27) CTGCGCCG 1 chr15:57620830-57620910 ( 55) CTGCGCCG 1 chr1:155100324-155100404 ( 50) CTGCGCCG 1 chr8:121135935-121136015 ( 11) CTGCGCCG 1 chr4:8594407-8594487 ( 55) CTGCGCCG 1 chr1:156818723-156818803 ( 53) CAGCGTAG 1 chr19:1841251-1841331 ( 32) CAGCGTAA 1 chr20:52225393-52225473 ( 54) ATACGCAA 1 chr10:103347765-10334784 ( 39) TGGCGCAG 1 chr6:74363841-74363921 ( 22) TGGCGCAA 1 chr4:1005948-1006028 ( 1) TGGCGCAG 1 chr4:187125543-187125623 ( 59) TTACGCTG 1 chr9:138798338-138798418 ( 27) ATACGCAA 1 chr3:129024545-129024625 ( 12) TGGCGCAG 1 chr11:22850920-22851000 ( 47) CGGCGCAG 1 chr17:48227415-48227495 ( 52) CGGCGCAG 1 chr5:141468577-141468657 ( 26) CTGCGTAT 1 chr1:22109123-22109203 ( 49) CGGCGCAA 1 chr1:8763140-8763220 ( 66) CGGCGCAG 1 chr17:18266928-18267008 ( 16) CGGCGCAG 1 chr9:136324800-136324880 ( 41) CTACGCTA 1 chr19:14184602-14184682 ( 33) CGGCGCAG 1 chr5:77541043-77541123 ( 26) ATGCGTAA 1 chr9:140571062-140571142 ( 27) TTACGCCA 1 chr19:6741080-6741160 ( 39) TTACGCCA 1 chr8:8559243-8559323 ( 5) AAGCGCAG 1 chr5:114962055-114962135 ( 38) TAGCGCTG 1 chr18:51750949-51751029 ( 12) TTCCGTAA 1 chr2:27069351-27069431 ( 13) AAGCGCAG 1 chr19:40030810-40030890 ( 58) TACCGCAA 1 chr1:85039961-85040041 ( 66) CAGCGCTA 1 chr3:110240031-110240111 ( 52) CTACGGAA 1 chr1:91082146-91082226 ( 38) CTACGGAA 1 chr15:34875847-34875927 ( 19) TACCGCAA 1 chr5:137089033-137089113 ( 17) CTCCGTAG 1 chr16:68323716-68323796 ( 21) TACCGCAA 1 chr3:45187552-45187632 ( 10) CTACGCCG 1 chr6:10419393-10419473 ( 62) CACCGCAG 1 chr1:6484520-6484600 ( 26) TTGCGTCG 1 chr2:157190461-157190541 ( 17) GAGCGCAG 1 chr7:142552457-142552537 ( 31) TTGCGCTT 1 chr7:26242434-26242514 ( 17) GAGCGCAG 1 chr2:111906600-111906680 ( 36) TAACGTAA 1 chr10:97055113-97055193 ( 44) GAGCGCAG 1 chr9:102582441-102582521 ( 27) CTGCGTCA 1 chr1:113421077-113421157 ( 30) CTGCGTCA 1 chr2:234776970-234777050 ( 59) TAGCGCCG 1 chr20:52225193-52225273 ( 29) CAGCGGAG 1 chr8:55383136-55383216 ( 15) CAGCGGAG 1 chr22:25843996-25844076 ( 3) GTGCGCAT 1 chr2:176995206-176995286 ( 56) CAGCGCCG 1 chr10:88281476-88281556 ( 23) TTGCGCTC 1 chr12:6603400-6603480 ( 59) ATCCGCAA 1 chr8:11660652-11660732 ( 38) TTGCGCTC 1 chrX:150250905-150250985 ( 4) CGACGCAG 1 chr7:156741470-156741550 ( 14) CTGCGCCT 1 chr9:124976284-124976364 ( 50) CTGCGCCT 1 chr9:26892449-26892529 ( 20) CTGCGCTC 1 chr12:56137308-56137388 ( 12) CTGCGCCT 1 chr3:168960231-168960311 ( 8) CTCCGCTG 1 chr16:30006517-30006597 ( 59) CTGCGCTC 1 chr9:7799758-7799838 ( 20) TGGCGTAA 1 chr6:42420196-42420276 ( 27) GTGCGCTG 1 chr6:28778225-28778305 ( 6) CTCCGCTA 1 chr2:152042639-152042719 ( 20) CTCCGCTG 1 chr2:54013520-54013600 ( 23) TTGCGGTA 1 chr19:58446730-58446810 ( 54) GTGCGCAC 1 chr18:7566752-7566832 ( 29) CGGCGTAG 1 chr20:443540-443620 ( 58) GTCCGCAG 1 chr9:129428873-129428953 ( 21) TTACGTAC 1 chr19:10829099-10829179 ( 63) CGGCGTAA 1 chr19:49436809-49436889 ( 54) CGGCGTAG 1 chr17:8060147-8060227 ( 7) CAGCGTAT 1 chr11:113185440-11318552 ( 61) TTGCGGAC 1 chr1:213218699-213218779 ( 42) CAGCGTAT 1 chr8:22842849-22842929 ( 37) CAGCGTAT 1 chr3:140661384-140661464 ( 50) GTGCGGAG 1 chr14:39736261-39736341 ( 34) TTGCGCGA 1 chr16:58018752-58018832 ( 41) GAACGCAG 1 chr7:92157180-92157260 ( 32) CTCCGCCA 1 chr10:2357328-2357408 ( 59) CTCCGGAA 1 chrX:107019410-107019490 ( 58) CTCCGCCA 1 chr5:122181503-122181583 ( 25) CTGCGCCC 1 chr4:154073328-154073408 ( 68) CTCCGGAG 1 chr14:97207840-97207920 ( 32) CTACGCTT 1 chr1:1004637-1004717 ( 51) TGGCGCTG 1 chr21:45158575-45158655 ( 18) ATACGCTG 1 chr4:160024221-160024301 ( 35) AGGCGCAG 1 chr2:64751900-64751980 ( 22) CTGCGGCG 1 chr21:45118624-45118704 ( 39) ATACGCTG 1 chr13:50018539-50018619 ( 41) CAACGGAG 1 chr1:1961651-1961731 ( 18) CTGCGGCG 1 chr5:76788240-76788320 ( 59) CTGCGGCG 1 chr1:33896076-33896156 ( 49) AGGCGCAG 1 chr7:44349381-44349461 ( 29) CACCGTAG 1 chr6:112408723-112408803 ( 15) TGCCGCAA 1 chrX:52950074-52950154 ( 7) CGGCGCTA 1 chr3:137906013-137906093 ( 34) TAGCGTCA 1 chr6:166797077-166797157 ( 45) CAGCGTCG 1 chr21:45118857-45118937 ( 62) GTACGCTG 1 chr10:103929391-10392947 ( 65) GGGCGCAG 1 chr4:1243222-1243302 ( 57) CGCCGCAG 1 chr3:44518909-44518989 ( 50) GGGCGCAG 1 chr14:89029326-89029406 ( 19) ATACGCCG 1 chr11:63448702-63448782 ( 59) TTGCGTCT 1 chr9:103361113-103361193 ( 68) AAGCGCTA 1 chr13:79980423-79980503 ( 17) CGGCGGAG 1 chr1:86861710-86861790 ( 2) TTACGCCC 1 chr8:144660253-144660333 ( 39) AAGCGCAC 1 chr2:208489375-208489455 ( 54) CGGCGGAA 1 chr22:31064135-31064215 ( 36) CGGCGCCA 1 chr19:36360628-36360708 ( 28) CAGCGCTC 1 chr22:39941949-39942029 ( 7) AAGCGGAA 1 chrX:119587997-119588077 ( 27) CAACGTTG 1 chr2:23806437-23806517 ( 10) GTGCGTCA 1 chr3:80819489-80819569 ( 35) CAACGTAC 1 chr3:80819704-80819784 ( 20) CAACGTAC 1 chrX:149106753-149106833 ( 22) CACCGCCA 1 chr19:35596843-35596923 ( 57) CACCGCCG 1 chrX:100075222-100075302 ( 15) GGACGCAA 1 chr15:51915163-51915243 ( 21) TTGCGCGT 1 chr9:34628984-34629064 ( 25) GTGCGCTC 1 chr18:13727034-13727114 ( 39) TTGAGTAA 1 chr6:80816336-80816416 ( 13) CTCCGCCC 1 chr3:111697880-111697960 ( 36) TTGCGCGC 1 chr16:68298823-68298903 ( 28) GTGCGCGG 1 chr18:9135926-9136006 ( 62) CTCCGGCA 1 chr2:86669340-86669420 ( 67) TAACGCGA 1 chr3:119813410-119813490 ( 71) GAACGGAG 1 chr5:56111494-56111574 ( 36) CTGCGGGA 1 chr2:149403283-149403363 ( 41) TAGCGTCC 1 chr13:38211014-38211094 ( 5) AAACGCTT 1 chr16:1386131-1386211 ( 54) CAGCGGCT 1 chr19:38085560-38085640 ( 32) TGAAGCAA 1 chr6:80247191-80247271 ( 71) GTGCGGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.89179 E= 7.1e-059 -142 68 -167 83 30 -1461 -151 190 -5 -137 113 -1461 -451 163 -1461 -1461 -1461 -1461 165 -1461 -1461 120 -162 -19 189 -97 -351 -43 79 -180 70 -130 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 250 E= 7.1e-059 0.068000 0.516000 0.100000 0.316000 0.224000 0.000000 0.112000 0.664000 0.176000 0.124000 0.700000 0.000000 0.008000 0.992000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.740000 0.104000 0.156000 0.676000 0.164000 0.028000 0.132000 0.316000 0.092000 0.520000 0.072000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGCGCAR MEME-1 regular expression -------------------------------------------------------------------------------- [CT][TA]GCGCA[GA] -------------------------------------------------------------------------------- Time 5.04 secs. ******************************************************************************** ******************************************************************************** MOTIF TAAATGAA MEME-2 width = 8 sites = 8 llr = 91 E-value = 3.7e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :9aa::98 pos.-specific C ::::::11 probability G :1:::a:: matrix T a:::a::1 bits 2.5 * *** 2.2 * *** 2.0 * *** 1.7 ******* Relative 1.5 ******* Entropy 1.2 ******** (16.5 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TAAATGAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:141468577-141468657 1 2.00e-06 . taaatgaa tctcctttgt chr1:213218699-213218779 17 2.00e-06 aatagcggtt taaatgaa tctcctttgt chr5:77541043-77541123 61 2.00e-06 gatagtggtt taaatgaa tctcctttgt chr8:22842849-22842929 12 2.00e-06 aatagcggtt taaatgaa tctcctttgt chr15:57620830-57620910 31 3.94e-06 TTGTCAGGCG TAAATGAT GTCTTTCCCT chr19:49436809-49436889 18 7.46e-06 AAGCTAGAAC TAAATGAC CGCTCTGCCG chr19:40030810-40030890 17 1.45e-05 ATGCGCGCTG TAAATGCA GTGTGCGTAA chr1:6484520-6484600 72 1.45e-05 ACTGGGCAGA TGAATGAA T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:141468577-141468657 2e-06 [+2]_72 chr1:213218699-213218779 2e-06 16_[+2]_56 chr5:77541043-77541123 2e-06 60_[+2]_12 chr8:22842849-22842929 2e-06 11_[+2]_61 chr15:57620830-57620910 3.9e-06 30_[+2]_42 chr19:49436809-49436889 7.5e-06 17_[+2]_55 chr19:40030810-40030890 1.4e-05 16_[+2]_56 chr1:6484520-6484600 1.4e-05 71_[+2]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAAATGAA width=8 seqs=8 chr5:141468577-141468657 ( 1) TAAATGAA 1 chr1:213218699-213218779 ( 17) TAAATGAA 1 chr5:77541043-77541123 ( 61) TAAATGAA 1 chr8:22842849-22842929 ( 12) TAAATGAA 1 chr15:57620830-57620910 ( 31) TAAATGAT 1 chr19:49436809-49436889 ( 18) TAAATGAC 1 chr19:40030810-40030890 ( 17) TAAATGCA 1 chr1:6484520-6484600 ( 72) TGAATGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.8922 E= 3.7e+001 -965 -965 -965 249 226 -965 -135 -965 245 -965 -965 -965 245 -965 -965 -965 -965 -965 -965 249 -965 -965 165 -965 226 -136 -965 -965 204 -136 -965 -50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 3.7e+001 0.000000 0.000000 0.000000 1.000000 0.875000 0.000000 0.125000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.875000 0.125000 0.000000 0.000000 0.750000 0.125000 0.000000 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATGAA MEME-2 regular expression -------------------------------------------------------------------------------- TAAATGAA -------------------------------------------------------------------------------- Time 8.42 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCTTTGT MEME-3 width = 8 sites = 5 llr = 60 E-value = 5.4e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::::::: pos.-specific C :aa::::: probability G ::::::a: matrix T a::aaa:a bits 2.5 * *** * 2.2 * *** * 2.0 * *** * 1.7 ******** Relative 1.5 ******** Entropy 1.2 ******** (17.4 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCCTTTGT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:141468577-141468657 11 5.71e-06 taaatgaatc tcctttgt gctcaaactg chr21:45118857-45118937 38 5.71e-06 ctcttctcat tcctttgt tgccaccgaa chr1:213218699-213218779 27 5.71e-06 taaatgaatc tcctttgt gctcaaacag chr5:77541043-77541123 71 5.71e-06 taaatgaatc tcctttgt gc chr8:22842849-22842929 22 5.71e-06 taaatgaatc tcctttgt gctcaaacag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:141468577-141468657 5.7e-06 10_[+3]_62 chr21:45118857-45118937 5.7e-06 37_[+3]_35 chr1:213218699-213218779 5.7e-06 26_[+3]_46 chr5:77541043-77541123 5.7e-06 70_[+3]_2 chr8:22842849-22842929 5.7e-06 21_[+3]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCTTTGT width=8 seqs=5 chr5:141468577-141468657 ( 11) TCCTTTGT 1 chr21:45118857-45118937 ( 38) TCCTTTGT 1 chr1:213218699-213218779 ( 27) TCCTTTGT 1 chr5:77541043-77541123 ( 71) TCCTTTGT 1 chr8:22842849-22842929 ( 22) TCCTTTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.0849 E= 5.4e+002 -897 -897 -897 249 -897 164 -897 -897 -897 164 -897 -897 -897 -897 -897 249 -897 -897 -897 249 -897 -897 -897 249 -897 -897 165 -897 -897 -897 -897 249 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 5 E= 5.4e+002 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTTTGT MEME-3 regular expression -------------------------------------------------------------------------------- TCCTTTGT -------------------------------------------------------------------------------- Time 11.77 secs. ******************************************************************************** ******************************************************************************** MOTIF CTTTTTAT MEME-4 width = 8 sites = 2 llr = 26 E-value = 5.3e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::::a: pos.-specific C a::::::: probability G :::::::: matrix T :aaaaa:a bits 2.5 ******* 2.2 ******* 2.0 ******* 1.7 ******** Relative 1.5 ******** Entropy 1.2 ******** (19.1 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CTTTTTAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:80247191-80247271 30 1.80e-06 CCAGACGGCC CTTTTTAT TGGCTTCAGT chr11:76082320-76082400 56 1.80e-06 cttcttgctg ctttttat acacttccta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:80247191-80247271 1.8e-06 29_[+4]_43 chr11:76082320-76082400 1.8e-06 55_[+4]_17 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTTTTTAT width=8 seqs=2 chr6:80247191-80247271 ( 30) CTTTTTAT 1 chr11:76082320-76082400 ( 56) CTTTTTAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 5.3e+003 -765 163 -765 -765 -765 -765 -765 249 -765 -765 -765 249 -765 -765 -765 249 -765 -765 -765 249 -765 -765 -765 249 245 -765 -765 -765 -765 -765 -765 249 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 5.3e+003 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTTTTTAT MEME-4 regular expression -------------------------------------------------------------------------------- CTTTTTAT -------------------------------------------------------------------------------- Time 15.10 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTAHGAA MEME-5 width = 8 sites = 6 llr = 66 E-value = 1.4e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::a3:8a pos.-specific C ::::3::: probability G :::::8:: matrix T aaa:322: bits 2.5 **** * 2.2 **** * 2.0 **** * 1.7 **** ** Relative 1.5 **** ** Entropy 1.2 **** *** (16.0 bits) 1.0 **** *** 0.7 **** *** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTTAAGAA consensus C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr21:45118857-45118937 8 1.89e-06 tcctacc tttatgaa ctcttaacct chr2:113470962-113471042 38 1.89e-06 aCTAGGATGG TTTATGAA TAGGAGCTGC chr6:166797077-166797157 66 3.83e-06 GAGGAAAGCA TTTAAGAA TAGCACA chr1:78355073-78355153 36 7.25e-06 GGGCTGGAAG TTTACGAA GTTTACGTAG chrX:150250905-150250985 33 9.38e-06 GAGTCCGGAC TTTAATAA TGCACGCGGC chr9:129428873-129428953 33 1.83e-05 ACGTACGTGC TTTACGTA CGCATGTTCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:45118857-45118937 1.9e-06 7_[+5]_65 chr2:113470962-113471042 1.9e-06 37_[+5]_35 chr6:166797077-166797157 3.8e-06 65_[+5]_7 chr1:78355073-78355153 7.3e-06 35_[+5]_37 chrX:150250905-150250985 9.4e-06 32_[+5]_40 chr9:129428873-129428953 1.8e-05 32_[+5]_40 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTAHGAA width=8 seqs=6 chr21:45118857-45118937 ( 8) TTTATGAA 1 chr2:113470962-113471042 ( 38) TTTATGAA 1 chr6:166797077-166797157 ( 66) TTTAAGAA 1 chr1:78355073-78355153 ( 36) TTTACGAA 1 chrX:150250905-150250985 ( 33) TTTAATAA 1 chr9:129428873-129428953 ( 33) TTTACGTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.67 E= 1.4e+004 -923 -923 -923 249 -923 -923 -923 249 -923 -923 -923 249 245 -923 -923 -923 87 5 -923 91 -923 -923 138 -9 219 -923 -923 -9 245 -923 -923 -923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 6 E= 1.4e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.333333 0.333333 0.000000 0.333333 0.000000 0.000000 0.833333 0.166667 0.833333 0.000000 0.000000 0.166667 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAHGAA MEME-5 regular expression -------------------------------------------------------------------------------- TTTA[ACT]GAA -------------------------------------------------------------------------------- Time 18.45 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:154073328-154073408 5.35e-01 80 chr8:11205167-11205247 3.54e-01 80 chr16:1386131-1386211 9.91e-01 80 chr4:8594407-8594487 5.29e-01 80 chr10:93668367-93668447 7.00e-02 3_[+1(3.00e-05)]_47_[+1(8.43e-05)]_\ 14 chr8:121135935-121136015 2.74e-01 80 chr7:44349381-44349461 9.84e-01 80 chr5:122181503-122181583 4.36e-01 80 chr2:152042639-152042719 9.23e-01 80 chr10:7210504-7210584 1.12e-02 80 chr10:124914579-12491465 8.97e-02 80 chr10:97055113-97055193 7.70e-01 80 chr4:113444344-113444424 9.11e-03 40_[+1(8.43e-05)]_32 chr13:32420880-32420960 6.36e-01 80 chr8:98656921-98657001 1.25e-01 80 chr3:45187552-45187632 3.01e-01 80 chr2:111906600-111906680 3.15e-03 80 chr10:81838643-81838723 6.76e-01 80 chr1:155100324-155100404 6.42e-01 80 chr19:20012037-20012117 1.02e-01 80 chr2:85914490-85914570 7.80e-03 31_[+1(3.00e-05)]_41 chr19:54974901-54974981 1.04e-01 80 chr1:36593936-36594016 1.29e-02 32_[+1(3.00e-05)]_40 chr14:74226120-74226200 3.19e-01 80 chr14:67708342-67708422 3.50e-01 14_[+1(8.43e-05)]_58 chr15:57620830-57620910 1.71e-04 30_[+2(3.94e-06)]_42 chr1:33896076-33896156 9.90e-01 80 chr22:31064135-31064215 6.82e-01 80 chr2:113470962-113471042 1.77e-05 37_[+5(1.89e-06)]_35 chr7:157130598-157130678 1.39e-01 80 chr16:68323716-68323796 1.42e-01 80 chr7:8301831-8301911 5.12e-01 80 chr6:13487512-13487592 1.94e-02 37_[+1(3.00e-05)]_35 chr5:173846658-173846738 1.36e-02 23_[+1(8.43e-05)]_49 chr19:14184602-14184682 2.41e-01 80 chr22:47133913-47133993 6.30e-01 80 chr17:7660448-7660528 5.13e-02 80 chr9:32552579-32552659 2.12e-02 80 chr14:97207840-97207920 2.43e-01 80 chr19:49436809-49436889 4.23e-02 17_[+2(7.46e-06)]_55 chr2:176995206-176995286 8.49e-01 80 chr6:28778225-28778305 2.04e-01 80 chr19:10829099-10829179 8.16e-01 80 chr6:42420196-42420276 8.95e-03 80 chr15:74220059-74220139 6.70e-01 80 chr5:76788240-76788320 5.97e-01 80 chrX:108780669-108780749 3.28e-04 80 chr2:27069351-27069431 4.05e-01 80 chr9:129428873-129428953 1.48e-03 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