******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/GABPB1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr2:118845921-118846001 1.0000 80 chr7:6865932-6866012 1.0000 80 chr13:53191573-53191653 1.0000 80 chr20:2489747-2489827 1.0000 80 chr7:5553415-5553495 1.0000 80 chr3:132379078-132379158 1.0000 80 chr14:45604951-45605031 1.0000 80 chr12:123459218-12345929 1.0000 80 chr19:51963856-51963936 1.0000 80 chr1:155112980-155113060 1.0000 80 chr17:15587586-15587666 1.0000 80 chr13:114103640-11410372 1.0000 80 chr8:182397-182477 1.0000 80 chr22:31556062-31556142 1.0000 80 chr7:100861285-100861365 1.0000 80 chrX:19003062-19003142 1.0000 80 chr20:48532161-48532241 1.0000 80 chr8:126575865-126575945 1.0000 80 chr11:31391339-31391419 1.0000 80 chr10:1102684-1102764 1.0000 80 chr17:61904487-61904567 1.0000 80 chr8:141474803-141474883 1.0000 80 chr1:40506357-40506437 1.0000 80 chr17:18684497-18684577 1.0000 80 chr20:19997930-19998010 1.0000 80 chr22:27068764-27068844 1.0000 80 chr17:42264289-42264369 1.0000 80 chr17:37844279-37844359 1.0000 80 chr19:55663511-55663591 1.0000 80 chr12:105630032-10563011 1.0000 80 chr5:68855970-68856050 1.0000 80 chr10:114206797-11420687 1.0000 80 chr20:18548040-18548120 1.0000 80 chr16:3162483-3162563 1.0000 80 chr9:35812266-35812346 1.0000 80 chr1:12142006-12142086 1.0000 80 chr19:52643135-52643215 1.0000 80 chr13:41837674-41837754 1.0000 80 chr8:143751384-143751464 1.0000 80 chr7:72299839-72299919 1.0000 80 chr13:41345309-41345389 1.0000 80 chr5:130506375-130506455 1.0000 80 chr9:104296012-104296092 1.0000 80 chr7:157129628-157129708 1.0000 80 chr14:21458075-21458155 1.0000 80 chr16:81779939-81780019 1.0000 80 chr8:124780643-124780723 1.0000 80 chr15:40331334-40331414 1.0000 80 chr12:6602503-6602583 1.0000 80 chr14:77924262-77924342 1.0000 80 chr15:40675093-40675173 1.0000 80 chr2:45838387-45838467 1.0000 80 chr3:13493354-13493434 1.0000 80 chr1:2187372-2187452 1.0000 80 chr13:100150825-10015090 1.0000 80 chr1:155990726-155990806 1.0000 80 chrX:2548735-2548815 1.0000 80 chr22:38453311-38453391 1.0000 80 chr19:37263920-37264000 1.0000 80 chr13:52768555-52768635 1.0000 80 chrX:49091951-49092031 1.0000 80 chr14:69658195-69658275 1.0000 80 chr9:125675587-125675667 1.0000 80 chr16:639284-639364 1.0000 80 chr22:29949731-29949811 1.0000 80 chr12:56223375-56223455 1.0000 80 chr14:35761569-35761649 1.0000 80 chr12:54582839-54582919 1.0000 80 chr13:29233202-29233282 1.0000 80 chrX:2548962-2549042 1.0000 80 chr20:44993017-44993097 1.0000 80 chr6:32143871-32143951 1.0000 80 chr16:56485254-56485334 1.0000 80 chr9:129567239-129567319 1.0000 80 chr8:144718067-144718147 1.0000 80 chr19:51728280-51728360 1.0000 80 chr3:178865834-178865914 1.0000 80 chr8:30601815-30601895 1.0000 80 chr19:16296087-16296167 1.0000 80 chr22:42078466-42078546 1.0000 80 chr19:44716590-44716670 1.0000 80 chr12:6798728-6798808 1.0000 80 chr5:93954300-93954380 1.0000 80 chr1:762791-762871 1.0000 80 chr1:2187572-2187652 1.0000 80 chr3:15469042-15469122 1.0000 80 chr14:23938867-23938947 1.0000 80 chr2:201753967-201754047 1.0000 80 chr10:103347975-10334805 1.0000 80 chr1:7887444-7887524 1.0000 80 chr3:121468765-121468845 1.0000 80 chr3:129118397-129118477 1.0000 80 chr7:44084168-44084248 1.0000 80 chr10:64564242-64564322 1.0000 80 chr8:146052887-146052967 1.0000 80 chr3:52321933-52322013 1.0000 80 chr11:71823685-71823765 1.0000 80 chr12:69864124-69864204 1.0000 80 chr22:46731538-46731618 1.0000 80 chr19:50379508-50379588 1.0000 80 chr12:38710452-38710532 1.0000 80 chr3:88198988-88199068 1.0000 80 chr10:105156297-10515637 1.0000 80 chr9:130700138-130700218 1.0000 80 chr19:9517708-9517788 1.0000 80 chr19:44439447-44439527 1.0000 80 chr10:27443303-27443383 1.0000 80 chr9:35103133-35103213 1.0000 80 chr1:160001759-160001839 1.0000 80 chr13:31191962-31192042 1.0000 80 chrX:7895726-7895806 1.0000 80 chr17:61627722-61627802 1.0000 80 chr11:64085036-64085116 1.0000 80 chr4:41937115-41937195 1.0000 80 chr22:29784519-29784599 1.0000 80 chr15:74988334-74988414 1.0000 80 chr7:39663128-39663208 1.0000 80 chr10:102747246-10274732 1.0000 80 chr11:118122889-11812296 1.0000 80 chr11:6502605-6502685 1.0000 80 chr14:21852195-21852275 1.0000 80 chr2:128051691-128051771 1.0000 80 chr14:69291632-69291712 1.0000 80 chr2:133104978-133105058 1.0000 80 chr13:46038930-46039010 1.0000 80 chr16:31085650-31085730 1.0000 80 chr12:498490-498570 1.0000 80 chr3:130465643-130465723 1.0000 80 chr19:49955122-49955202 1.0000 80 chr19:56186460-56186540 1.0000 80 chr15:64648366-64648446 1.0000 80 chr1:203652033-203652113 1.0000 80 chr14:75469590-75469670 1.0000 80 chr6:28220017-28220097 1.0000 80 chr8:144287490-144287570 1.0000 80 chr12:48551236-48551316 1.0000 80 chr3:179065413-179065493 1.0000 80 chr3:184081054-184081134 1.0000 80 chr14:24912105-24912185 1.0000 80 chr1:169337255-169337335 1.0000 80 chr7:6617007-6617087 1.0000 80 chr14:75179779-75179859 1.0000 80 chr19:8617814-8617894 1.0000 80 chr10:15001879-15001959 1.0000 80 chr1:150039759-150039839 1.0000 80 chr2:203103260-203103340 1.0000 80 chr9:125693786-125693866 1.0000 80 chr10:15902524-15902604 1.0000 80 chr3:101280629-101280709 1.0000 80 chr18:39534995-39535075 1.0000 80 chr10:124713724-12471380 1.0000 80 chr2:27994572-27994652 1.0000 80 chr4:120221732-120221812 1.0000 80 chr2:230786085-230786165 1.0000 80 chr19:11039367-11039447 1.0000 80 chr5:158690219-158690299 1.0000 80 chr9:140118113-140118193 1.0000 80 chr19:58258100-58258180 1.0000 80 chr19:4182535-4182615 1.0000 80 chr20:44486046-44486126 1.0000 80 chr22:50683460-50683540 1.0000 80 chr4:113152672-113152752 1.0000 80 chr22:38082354-38082434 1.0000 80 chr16:2771109-2771189 1.0000 80 chr20:55685493-55685573 1.0000 80 chr3:119217252-119217332 1.0000 80 chr2:219536673-219536753 1.0000 80 chr16:84220628-84220708 1.0000 80 chr4:153701076-153701156 1.0000 80 chr11:64037505-64037585 1.0000 80 chr4:56719782-56719862 1.0000 80 chr12:16035273-16035353 1.0000 80 chrX:119077720-119077800 1.0000 80 chr5:87564638-87564718 1.0000 80 chr5:271489-271569 1.0000 80 chr1:151371948-151372028 1.0000 80 chr3:48481560-48481640 1.0000 80 chr5:80597366-80597446 1.0000 80 chr10:71930245-71930325 1.0000 80 chr2:174830142-174830222 1.0000 80 chr19:9879396-9879476 1.0000 80 chr3:15419799-15419879 1.0000 80 chr17:63119396-63119476 1.0000 80 chr17:19281194-19281274 1.0000 80 chrX:108780037-108780117 1.0000 80 chr17:10600836-10600916 1.0000 80 chr9:138853306-138853386 1.0000 80 chr12:9102548-9102628 1.0000 80 chr22:26908427-26908507 1.0000 80 chr19:7069614-7069694 1.0000 80 chr19:14800768-14800848 1.0000 80 chr5:443210-443290 1.0000 80 chr16:3156489-3156569 1.0000 80 chr20:40322129-40322209 1.0000 80 chrX:153775788-153775868 1.0000 80 chr11:62495861-62495941 1.0000 80 chr20:2644836-2644916 1.0000 80 chr14:35452075-35452155 1.0000 80 chr7:102988049-102988129 1.0000 80 chr14:74353501-74353581 1.0000 80 chr9:34620543-34620623 1.0000 80 chr16:1823145-1823225 1.0000 80 chr10:44101808-44101888 1.0000 80 chr2:43447117-43447197 1.0000 80 chr16:89307629-89307709 1.0000 80 chr19:58071217-58071297 1.0000 80 chr5:133702876-133702956 1.0000 80 chr11:57479845-57479925 1.0000 80 chr18:72265007-72265087 1.0000 80 chr2:201936617-201936697 1.0000 80 chr17:1227613-1227693 1.0000 80 chr20:60962022-60962102 1.0000 80 chr5:167913398-167913478 1.0000 80 chr22:40742476-40742556 1.0000 80 chr4:148538531-148538611 1.0000 80 chr2:175260395-175260475 1.0000 80 chr7:44240489-44240569 1.0000 80 chr16:27280120-27280200 1.0000 80 chr1:55230339-55230419 1.0000 80 chr14:100842662-10084274 1.0000 80 chr1:11862812-11862892 1.0000 80 chr5:102455837-102455917 1.0000 80 chrX:21857633-21857713 1.0000 80 chr16:30087238-30087318 1.0000 80 chr1:24117568-24117648 1.0000 80 chr11:45939415-45939495 1.0000 80 chrX:70208418-70208498 1.0000 80 chr14:24658119-24658199 1.0000 80 chr2:70121031-70121111 1.0000 80 chr16:1832793-1832873 1.0000 80 chr19:12780341-12780421 1.0000 80 chr9:135282194-135282274 1.0000 80 chr19:2950606-2950686 1.0000 80 chr2:71357677-71357757 1.0000 80 chr8:146176217-146176297 1.0000 80 chr16:2892704-2892784 1.0000 80 chr19:9938510-9938590 1.0000 80 chr3:128880067-128880147 1.0000 80 chr16:77225000-77225080 1.0000 80 chr1:32110618-32110698 1.0000 80 chr19:6393178-6393258 1.0000 80 chr3:100119995-100120075 1.0000 80 chr5:74062971-74063051 1.0000 80 chr1:44435489-44435569 1.0000 80 chr19:40477006-40477086 1.0000 80 chr2:39005280-39005360 1.0000 80 chr11:43902266-43902346 1.0000 80 chr20:5093701-5093781 1.0000 80 chr3:49893966-49894046 1.0000 80 chr1:33116141-33116221 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_GABPB1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/GABPB1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.19 C 0.306 G 0.309 T 0.195 Background letter frequencies (from file dataset with add-one prior applied): A 0.19 C 0.306 G 0.309 T 0.195 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCGGAAGT MEME-1 width = 8 sites = 164 llr = 1307 E-value = 1.1e-169 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 12::aa21 pos.-specific C 88:::::2 probability G 1:aa::81 matrix T :::::::6 bits 2.4 2.2 ** 1.9 ** 1.7 **** Relative 1.4 **** Entropy 1.2 ***** (11.5 bits) 1.0 ******* 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCGGAAGT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:49893966-49894046 43 1.94e-05 CTGGAGCGGG CCGGAAGT GACAACACAA chr20:5093701-5093781 25 1.94e-05 GATCAGTGCG CCGGAAGT GGCGTGCCGG chr11:43902266-43902346 28 1.94e-05 GGACTGCGCA CCGGAAGT AGTGGCGGCG chr1:32110618-32110698 54 1.94e-05 GATGGAGCTT CCGGAAGT CTTGGCGGCT chr16:77225000-77225080 25 1.94e-05 AGCTCCGCAA CCGGAAGT GTCTTCTGGG chr8:146176217-146176297 37 1.94e-05 CGGCTGACCC CCGGAAGT CCCGCCCCGA chr9:135282194-135282274 14 1.94e-05 TTCTCCCAAC CCGGAAGT GCTGCTGTTG chr2:70121031-70121111 43 1.94e-05 CCCGGCCCTC CCGGAAGT TGTTGCACAG chr1:55230339-55230419 67 1.94e-05 AATCACCGTT CCGGAAGT ACTTTC chr18:72265007-72265087 52 1.94e-05 TTGGAAGCCA CCGGAAGT CCTTCGACGG chr19:58071217-58071297 4 1.94e-05 AGG CCGGAAGT CCCGCCCCTG chr16:1823145-1823225 3 1.94e-05 GG CCGGAAGT CACCGGAAGA chr9:34620543-34620623 52 1.94e-05 CCCTTCAGTG CCGGAAGT TACTCCTCGG chr16:3156489-3156569 51 1.94e-05 GCCCGGCAAG CCGGAAGT TGCAATGGGG chr17:10600836-10600916 51 1.94e-05 TCCGCTTCCT CCGGAAGT CGGAAGGAGT chr17:19281194-19281274 42 1.94e-05 GGCTCAGCCA CCGGAAGT CAGTGGAGGG chr5:80597366-80597446 17 1.94e-05 GTCTGTGACG CCGGAAGT GACGCGCTCT chr5:87564638-87564718 26 1.94e-05 TCCGGCTCTG CCGGAAGT TGTGCGCGCG chr16:84220628-84220708 34 1.94e-05 CCGGTTTGGA CCGGAAGT GCCTCCTGCG chr3:119217252-119217332 66 1.94e-05 CCGCCCTCAA CCGGAAGT CTTTTGG chr22:38082354-38082434 3 1.94e-05 AC CCGGAAGT GTCTTCAGGG chr20:44486046-44486126 1 1.94e-05 . CCGGAAGT CTCCTGCAGA chr10:15902524-15902604 35 1.94e-05 GGCTGAGGGC CCGGAAGT CCCCTCCCCG chr7:6617007-6617087 27 1.94e-05 CACACTTCCG CCGGAAGT CAGCCCCTCA chr3:179065413-179065493 62 1.94e-05 AGGCAAGAGG CCGGAAGT GACCGCCCTT chr14:75469590-75469670 32 1.94e-05 CTCGCCCGCC CCGGAAGT GCAAACTGTG chr19:56186460-56186540 16 1.94e-05 GCCCAGCGCG CCGGAAGT GATGCCTTCC chr11:118122889-11812296 14 1.94e-05 AACCCCCCGG CCGGAAGT GGAGCGTAGC chr7:39663128-39663208 30 1.94e-05 CCCCAGCGCC CCGGAAGT GATCTGTGGC chr11:64085036-64085116 66 1.94e-05 GCCAGGAGAA CCGGAAGT GGCGAAC chrX:7895726-7895806 27 1.94e-05 TTTCTGTGCC CCGGAAGT GCCTTACCCT chr19:50379508-50379588 21 1.94e-05 GAGGCCAGGA CCGGAAGT CCCGCCTTTG chr12:69864124-69864204 29 1.94e-05 CCCCGCTCCC CCGGAAGT GCTTTTCCAA chr8:146052887-146052967 15 1.94e-05 CCCAGGGCGG CCGGAAGT TTGCGGGGCG chr10:103347975-10334805 54 1.94e-05 TCCGAGTCAG CCGGAAGT GACCCTCTGG chr3:15469042-15469122 30 1.94e-05 CTACCCGACG CCGGAAGT CCCACGGCCT chr19:16296087-16296167 18 1.94e-05 CGCCCACTAC CCGGAAGT GTGGCCCGGG chr8:144718067-144718147 38 1.94e-05 GTCCCCGGGC CCGGAAGT CCGCACCACT chr16:56485254-56485334 2 1.94e-05 G CCGGAAGT GAACCCGGAG chr20:44993017-44993097 28 1.94e-05 AATCTCCCCA CCGGAAGT GCGAGGCCGG chr22:29949731-29949811 8 1.94e-05 TAGAGAA CCGGAAGT AAGGAAGGGG chr13:100150825-10015090 42 1.94e-05 GAGGCCGGAT CCGGAAGT AGGGGGACCA chr3:13493354-13493434 22 1.94e-05 gtggcaacac ccggaagt tactgcccct chr2:45838387-45838467 35 1.94e-05 CCGGTTCCCG CCGGAAGT TTTTCAAACG chr15:40675093-40675173 36 1.94e-05 CGCCTAGCTA CCGGAAGT TTCTATTTGA chr12:6602503-6602583 38 1.94e-05 GGTCCGCCTG CCGGAAGT TTTGGAGCGC chr15:40331334-40331414 34 1.94e-05 GCAGTGAGAG CCGGAAGT TCGGCCTAGG chr5:130506375-130506455 17 1.94e-05 GATCCCTGCG CCGGAAGT GACTGTGCCC chr20:18548040-18548120 25 1.94e-05 GACGCCCTCA CCGGAAGT CCCGCCTCTG chr17:37844279-37844359 54 1.94e-05 TCCGGAGTAA CCGGAAGT TCCTGTGTTC chr1:40506357-40506437 26 1.94e-05 CAGTGAGGGC CCGGAAGT GGGTCGCGCG chr8:141474803-141474883 45 1.94e-05 AGGGGAGCGA CCGGAAGT GACGCACGAG chr10:1102684-1102764 59 1.94e-05 TCCGGCGACA CCGGAAGT GCATTAGCGC chr7:100861285-100861365 4 1.94e-05 AGG CCGGAAGT GGTTTTGCCC chr22:31556062-31556142 72 1.94e-05 CCGGTTGGGG CCGGAAGT C chr1:155112980-155113060 33 1.94e-05 ATGTTGGCGT CCGGAAGT CCTCCCTGGT chr12:123459218-12345929 1 1.94e-05 . CCGGAAGT AATGCGAGAC chr22:26908427-26908507 28 3.14e-05 GGCCGGCGCG CCGGAAAT GACGTTAGTC chr2:219536673-219536753 45 3.14e-05 GCAGCCGGAA CCGGAAAT GCCCTTAGGG chr22:50683460-50683540 15 3.14e-05 GGCGGGCGCG CCGGAAAT ACGTCACGGG chr13:46038930-46039010 32 3.14e-05 TACGTTTCAA CCGGAAAT AGTCGTACCC chr5:93954300-93954380 19 3.14e-05 TGACAACCAC CCGGAAAT GGTACTATCG chr12:54582839-54582919 27 3.14e-05 GCCACTTCCG CCGGAAAT GCTCCAATCC chr1:155990726-155990806 18 3.14e-05 ATCCGAAAGA CCGGAAAT AAGCACTGGC chr12:105630032-10563011 15 3.14e-05 GGTCCCGACA CCGGAAAT GTGGCGCCCG chr3:128880067-128880147 8 4.35e-05 AAAGGGA CAGGAAGT GAATGAGAGT chr20:2644836-2644916 7 4.35e-05 TTCCCG CAGGAAGT CGCGTGGGAA chr19:8617814-8617894 54 4.35e-05 GGACCATGAG CAGGAAGT GAGTCTCCCC chr8:144287490-144287570 39 4.35e-05 TCTGATTTGA CAGGAAGT GTGTCCGGGA chr6:28220017-28220097 37 4.35e-05 GGCTGGGGCA CAGGAAGT CTCGATGGGA chr3:121468765-121468845 65 4.35e-05 TGGGGAGGGA CAGGAAGT GTCGAGTG chr14:23938867-23938947 20 4.35e-05 CCTTAGCGCT CAGGAAGT ACGACACCGG chr22:42078466-42078546 7 4.35e-05 CAAGAG CAGGAAGT GACGCCACTG chr6:32143871-32143951 38 4.35e-05 CGGGGCCGGC CAGGAAGT GGAGGGCGGT chr22:27068764-27068844 30 4.35e-05 ATTTAGTACA CAGGAAGT CGGCCAGAGA chr8:126575865-126575945 34 4.35e-05 ATAGAAGAGA CAGGAAGT GTTACCCTGG chr19:6393178-6393258 39 7.40e-05 GCCGCCTAAC CCGGAAGC GAAACCCTCG chr20:60962022-60962102 3 7.40e-05 TG CCGGAAGC GGAAGTGCGT chr7:102988049-102988129 50 7.40e-05 GAAGACACCA CCGGAAGC AAGGAAGGTG chr14:35452075-35452155 60 7.40e-05 GCGGTGTGCC CCGGAAGC GGAAGTAGAT chrX:153775788-153775868 45 7.40e-05 AGCTATGACA CCGGAAGC CGGAAGCGTG chr5:443210-443290 52 7.40e-05 GGCGCCGTTG CCGGAAGC GGAAGTGCCC chr19:7069614-7069694 44 7.40e-05 CCAGCTGGAG CCGGAAGC GGAGGTGCAG chr19:4182535-4182615 54 7.40e-05 GCCGCTTCCG CCGGAAGC GGGGCGGGGC chr2:27994572-27994652 6 7.40e-05 GTGCC CCGGAAGC AGTTGTTGTT chr1:150039759-150039839 40 7.40e-05 GCCCGGACTC CCGGAAGC CGAATCCCGG chr14:75179779-75179859 46 7.40e-05 CTATCCTTTG CCGGAAGC AGTATGTGAA chr12:48551236-48551316 55 7.40e-05 AAGGCGTGAC CCGGAAGC AGAAGCTGTC chr2:128051691-128051771 50 7.40e-05 CCGGCTCAAT CCGGAAGC TCCCTGTTGT chr15:74988334-74988414 16 7.40e-05 GCCGCCGCTG CCGGAAGC GCCCCCACGT chr11:71823685-71823765 40 7.40e-05 CGGCGGCGAC CCGGAAGC GCTTCACCCA chr9:129567239-129567319 14 7.40e-05 TGACGCACCC CCGGAAGC ACTGTCAGTT chr14:35761569-35761649 17 7.40e-05 GGCTGGTACC CCGGAAGC AGTCGCTGCA chr20:2489747-2489827 71 7.40e-05 GCAGGCGCTT CCGGAAGC TG chr2:118845921-118846001 53 7.40e-05 ACAGCAGGAA CCGGAAGC TCTTCTGCCC chr12:9102548-9102628 46 9.36e-05 GGTGGCGGAA GCGGAAGT TACGCAGGCA chr3:184081054-184081134 54 9.36e-05 GGAGGCTGTG GCGGAAGT GGTCGCGTTA chr3:130465643-130465723 46 9.36e-05 CTGTCGCCGA GCGGAAGT GACGAAAAAG chr16:31085650-31085730 42 9.36e-05 TGCTCCCGAA GCGGAAGT TTCGCGGGGA chr22:29784519-29784599 28 9.36e-05 CACCTGCCGG GCGGAAGT GAGCTGCCCG chr19:44439447-44439527 63 9.36e-05 CGCCCCCTGG GCGGAAGT GCGGGCTTCG chr8:124780643-124780723 17 9.36e-05 GCGCCAGCGG GCGGAAGT GACGTGTGCC chr7:157129628-157129708 27 9.36e-05 TCAGGGTCGG GCGGAAGT TGACGCCGCC chr10:105156297-10515637 60 1.06e-04 CAACACAGCA ACGGAAGT AGGGTGTTGA chr13:29233202-29233282 53 1.06e-04 GCCCTCGGAA ACGGAAGT GAGCGGCGGG chr17:15587586-15587666 38 1.06e-04 GGGGCCGGAA ACGGAAGT GCGCGCCGAG chr14:74353501-74353581 49 1.32e-04 CCGGCGGGAG CCGGAAGA CGCTGTGTGT chr17:42264289-42264369 69 1.32e-04 CCGGGAGAAG CCGGAAGA GACC chrX:19003062-19003142 63 1.32e-04 GGGACCCAGC CCGGAAGA AAAAGGGGGA chr5:133702876-133702956 27 1.63e-04 GGGTCCCGAC CCGGAAGG GGAAGTGGGA chr11:64037505-64037585 27 1.63e-04 TTCACACGCA CCGGAAGG GAATCTGGGT chr3:101280629-101280709 35 1.63e-04 AAAAGCAGCG CCGGAAGG GAGAGGGCGG chr9:125693786-125693866 43 1.63e-04 CCCAACGGAA CCGGAAGG GCAGCCCTGG chr10:27443303-27443383 19 1.63e-04 ACAATCCGCC CCGGAAGG CGAGGCGCTA chr1:7887444-7887524 30 1.63e-04 CGGAACTGCA CCGGAAGG CCTGCATGGG chr9:125675587-125675667 70 1.63e-04 TCTAGGCGCC CCGGAAGG ACA chr13:114103640-11410372 39 1.63e-04 AGAGACACAC CCGGAAGG AGGGACCCTG chr4:120221732-120221812 32 1.82e-04 GTTCGCCGCA CCGGAAAC TGAGCGGAGT chr19:44716590-44716670 28 1.82e-04 AGAACTCTGT CCGGAAAC AATTGGGCCG chrX:119077720-119077800 30 2.01e-04 TCGTCACCGA CAGGAAGC GATGTGTGCA chr19:51728280-51728360 65 2.01e-04 TCTGCTCACA CAGGAAGC CCTGGAAG chr2:175260395-175260475 24 2.20e-04 AGCCGCCTAA CCGGAACT GCGTTTCCAG chr3:100119995-100120075 26 2.32e-04 GAGAGGAGGG GCGGAAAT CACTTCCGGG chr16:2771109-2771189 69 2.52e-04 GAGGCTCGGG GAGGAAGT TATT chr4:41937115-41937195 22 2.52e-04 CCTCTTCCCC ACGGAAAT GAAAGGAGCA chr16:639284-639364 19 2.52e-04 CTGCCCCGGA GAGGAAGT TCCGCCTCAT chr2:39005280-39005360 32 2.59e-04 TTTCTGGGGG AAGGAAGT GACGATCGGC chr9:138853306-138853386 25 2.59e-04 GGCCACCGCA AAGGAAGT GCGTCACGGG chr19:40477006-40477086 52 2.90e-04 GTTGTCGTCA GCGGAAGC GGTGACAGAT chr14:24912105-24912185 12 3.20e-04 TCTCGGCGAC CCGGAAAA ACTTGTAAAT chr16:81779939-81780019 35 3.20e-04 tggggcggaa acggaagc atggccgcag chr7:6865932-6866012 14 3.20e-04 CGCCGCAGGC CCGGAAAA AGAATCCGCC chr16:1832793-1832873 6 3.51e-04 GTTGA CCGGAAAG TAGGTCCGTG chr13:53191573-53191653 4 3.51e-04 CCA CCGGAAAG CAAAGGGAGA chr13:31191962-31192042 53 4.02e-04 CAGCGTGCAG CAGGAAGG AGGACTCTTT chr9:130700138-130700218 45 4.02e-04 GCGGAGCACG CCGGGAGT CGTAGTCCCC chr10:64564242-64564322 33 4.02e-04 GCGGGGAGTG CCGGGAGT TGTAGTCAAG chr12:6798728-6798808 3 4.02e-04 TT CCGGGAGT GGCTGGAACA chr19:52643135-52643215 49 4.02e-04 CAATCTGCTT CCGGGAGT GACGGAAACT chr12:498490-498570 15 4.14e-04 CCGCCCCCTG CAGGAAAC GGAATCCTTC chr12:38710452-38710532 60 4.14e-04 CCCGTCACTC CAGGAAAC AGCGACCCGC chr10:71930245-71930325 16 4.34e-04 CAGCTACTCG CCGGATGT ACGTCACACC chr9:35103133-35103213 55 4.34e-04 TTCCGCTCCC CCGGATGT ACTTCCGGCA chr10:124713724-12471380 1 5.02e-04 . CCGGAACC TCTCTTCCAG chr3:88198988-88199068 19 5.02e-04 CGTCCCCAGC CCGGAACC ACAAGTGAGG chr16:3162483-3162563 10 5.02e-04 ACTCCACAC CCGGAACC CTCAAAACCG chr11:31391339-31391419 46 5.02e-04 GTGACTTCCG GCGGAAGA AGAAGCCGGT chr14:45604951-45605031 18 5.02e-04 AAACAAAACA CCGGAACC GCACCGGGGA chr20:48532161-48532241 35 5.50e-04 GGAGGACAAA GCGGAAGG CCGAAGAGCG chr14:24658119-24658199 64 5.88e-04 CGGCTGAATC GCGGAAAC CCGACTCTG chr19:58258100-58258180 42 5.88e-04 AGGCGTTTCC GCGGAAAC AGTATAAAGG chr19:12780341-12780421 41 6.31e-04 TTAGGAGAAG CCAGAAGT CTTCCTTTCA chr2:71357677-71357757 7 6.69e-04 TGCGCC GCGGAACT TTCGGCTCTG chr16:30087238-30087318 45 6.69e-04 CCGGCGCGCG GCGGAACT GGCCTCCTTT chr1:151371948-151372028 30 6.69e-04 AAGTCGTCTA CAGGAAAA AGAAAGAAAT chr10:15001879-15001959 56 6.69e-04 TTATGGCAGA AAGGAAGC TGGAGGGATG chr19:37263920-37264000 61 6.69e-04 GGGTAAGACA CAGGAAAA CGTGCTTCCG chr3:132379078-132379158 44 6.69e-04 CCCAGCGAGG AAGGAAGC CGAAAGAGCC chr4:56719782-56719862 47 7.44e-04 TGTCACGTGC CCGGATAT AGGAAGTGTT chr19:9517708-9517788 48 8.25e-04 ACTTCCGTTT CCGGGAGC GCACTTCCGT chr22:38453311-38453391 5 8.25e-04 CGTC CCGGGAGC CGGGAAGGGA chr5:74062971-74063051 38 8.99e-04 CTAGCTAAAA GCGGAAAA CAGAGGCTCG chr2:201753967-201754047 39 1.03e-03 CGGCTGCCAA ACGGAAAG GACCACTTCC chr16:89307629-89307709 73 1.14e-03 gggactcggt gaggaact -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:49893966-49894046 1.9e-05 42_[+1]_30 chr20:5093701-5093781 1.9e-05 24_[+1]_48 chr11:43902266-43902346 1.9e-05 27_[+1]_45 chr1:32110618-32110698 1.9e-05 53_[+1]_19 chr16:77225000-77225080 1.9e-05 24_[+1]_48 chr8:146176217-146176297 1.9e-05 36_[+1]_36 chr9:135282194-135282274 1.9e-05 13_[+1]_59 chr2:70121031-70121111 1.9e-05 42_[+1]_30 chr1:55230339-55230419 1.9e-05 66_[+1]_6 chr18:72265007-72265087 1.9e-05 51_[+1]_21 chr19:58071217-58071297 1.9e-05 3_[+1]_69 chr16:1823145-1823225 1.9e-05 2_[+1]_70 chr9:34620543-34620623 1.9e-05 51_[+1]_21 chr16:3156489-3156569 1.9e-05 50_[+1]_22 chr17:10600836-10600916 1.9e-05 50_[+1]_22 chr17:19281194-19281274 1.9e-05 41_[+1]_31 chr5:80597366-80597446 1.9e-05 16_[+1]_56 chr5:87564638-87564718 1.9e-05 25_[+1]_47 chr16:84220628-84220708 1.9e-05 33_[+1]_39 chr3:119217252-119217332 1.9e-05 65_[+1]_7 chr22:38082354-38082434 1.9e-05 2_[+1]_70 chr20:44486046-44486126 1.9e-05 [+1]_72 chr10:15902524-15902604 1.9e-05 34_[+1]_38 chr7:6617007-6617087 1.9e-05 26_[+1]_46 chr3:179065413-179065493 1.9e-05 61_[+1]_11 chr14:75469590-75469670 1.9e-05 31_[+1]_41 chr19:56186460-56186540 1.9e-05 15_[+1]_57 chr11:118122889-11812296 1.9e-05 13_[+1]_59 chr7:39663128-39663208 1.9e-05 29_[+1]_43 chr11:64085036-64085116 1.9e-05 65_[+1]_7 chrX:7895726-7895806 1.9e-05 26_[+1]_46 chr19:50379508-50379588 1.9e-05 20_[+1]_52 chr12:69864124-69864204 1.9e-05 28_[+1]_44 chr8:146052887-146052967 1.9e-05 14_[+1]_58 chr10:103347975-10334805 1.9e-05 53_[+1]_19 chr3:15469042-15469122 1.9e-05 29_[+1]_43 chr19:16296087-16296167 1.9e-05 17_[+1]_55 chr8:144718067-144718147 1.9e-05 37_[+1]_35 chr16:56485254-56485334 1.9e-05 1_[+1]_71 chr20:44993017-44993097 1.9e-05 27_[+1]_45 chr22:29949731-29949811 1.9e-05 7_[+1]_65 chr13:100150825-10015090 1.9e-05 41_[+1]_31 chr3:13493354-13493434 1.9e-05 21_[+1]_51 chr2:45838387-45838467 1.9e-05 34_[+1]_38 chr15:40675093-40675173 1.9e-05 35_[+1]_37 chr12:6602503-6602583 1.9e-05 37_[+1]_35 chr15:40331334-40331414 1.9e-05 33_[+1]_39 chr5:130506375-130506455 1.9e-05 16_[+1]_56 chr20:18548040-18548120 1.9e-05 24_[+1]_48 chr17:37844279-37844359 1.9e-05 53_[+1]_19 chr1:40506357-40506437 1.9e-05 25_[+1]_47 chr8:141474803-141474883 1.9e-05 44_[+1]_28 chr10:1102684-1102764 1.9e-05 58_[+1]_14 chr7:100861285-100861365 1.9e-05 3_[+1]_69 chr22:31556062-31556142 1.9e-05 71_[+1]_1 chr1:155112980-155113060 1.9e-05 32_[+1]_40 chr12:123459218-12345929 1.9e-05 [+1]_72 chr22:26908427-26908507 3.1e-05 27_[+1]_45 chr2:219536673-219536753 3.1e-05 44_[+1]_28 chr22:50683460-50683540 3.1e-05 14_[+1]_58 chr13:46038930-46039010 3.1e-05 31_[+1]_41 chr5:93954300-93954380 3.1e-05 18_[+1]_54 chr12:54582839-54582919 3.1e-05 26_[+1]_46 chr1:155990726-155990806 3.1e-05 17_[+1]_55 chr12:105630032-10563011 3.1e-05 14_[+1]_58 chr3:128880067-128880147 4.3e-05 7_[+1]_65 chr20:2644836-2644916 4.3e-05 6_[+1]_66 chr19:8617814-8617894 4.3e-05 53_[+1]_19 chr8:144287490-144287570 4.3e-05 38_[+1]_34 chr6:28220017-28220097 4.3e-05 36_[+1]_36 chr3:121468765-121468845 4.3e-05 64_[+1]_8 chr14:23938867-23938947 4.3e-05 19_[+1]_53 chr22:42078466-42078546 4.3e-05 6_[+1]_66 chr6:32143871-32143951 4.3e-05 37_[+1]_35 chr22:27068764-27068844 4.3e-05 29_[+1]_43 chr8:126575865-126575945 4.3e-05 33_[+1]_39 chr19:6393178-6393258 7.4e-05 38_[+1]_34 chr20:60962022-60962102 7.4e-05 2_[+1]_70 chr7:102988049-102988129 7.4e-05 49_[+1]_23 chr14:35452075-35452155 7.4e-05 59_[+1]_13 chrX:153775788-153775868 7.4e-05 44_[+1]_28 chr5:443210-443290 7.4e-05 51_[+1]_21 chr19:7069614-7069694 7.4e-05 43_[+1]_29 chr19:4182535-4182615 7.4e-05 53_[+1]_19 chr2:27994572-27994652 7.4e-05 5_[+1]_67 chr1:150039759-150039839 7.4e-05 39_[+1]_33 chr14:75179779-75179859 7.4e-05 45_[+1]_27 chr12:48551236-48551316 7.4e-05 54_[+1]_18 chr2:128051691-128051771 7.4e-05 49_[+1]_23 chr15:74988334-74988414 7.4e-05 15_[+1]_57 chr11:71823685-71823765 7.4e-05 39_[+1]_33 chr9:129567239-129567319 7.4e-05 13_[+1]_59 chr14:35761569-35761649 7.4e-05 16_[+1]_56 chr20:2489747-2489827 7.4e-05 70_[+1]_2 chr2:118845921-118846001 7.4e-05 52_[+1]_20 chr12:9102548-9102628 9.4e-05 45_[+1]_27 chr3:184081054-184081134 9.4e-05 53_[+1]_19 chr3:130465643-130465723 9.4e-05 45_[+1]_27 chr16:31085650-31085730 9.4e-05 41_[+1]_31 chr22:29784519-29784599 9.4e-05 27_[+1]_45 chr19:44439447-44439527 9.4e-05 62_[+1]_10 chr8:124780643-124780723 9.4e-05 16_[+1]_56 chr7:157129628-157129708 9.4e-05 26_[+1]_46 chr10:105156297-10515637 0.00011 59_[+1]_13 chr13:29233202-29233282 0.00011 52_[+1]_20 chr17:15587586-15587666 0.00011 37_[+1]_35 chr14:74353501-74353581 0.00013 48_[+1]_24 chr17:42264289-42264369 0.00013 68_[+1]_4 chrX:19003062-19003142 0.00013 62_[+1]_10 chr5:133702876-133702956 0.00016 26_[+1]_46 chr11:64037505-64037585 0.00016 26_[+1]_46 chr3:101280629-101280709 0.00016 34_[+1]_38 chr9:125693786-125693866 0.00016 42_[+1]_30 chr10:27443303-27443383 0.00016 18_[+1]_54 chr1:7887444-7887524 0.00016 29_[+1]_43 chr9:125675587-125675667 0.00016 69_[+1]_3 chr13:114103640-11410372 0.00016 38_[+1]_34 chr4:120221732-120221812 0.00018 31_[+1]_41 chr19:44716590-44716670 0.00018 27_[+1]_45 chrX:119077720-119077800 0.0002 29_[+1]_43 chr19:51728280-51728360 0.0002 64_[+1]_8 chr2:175260395-175260475 0.00022 23_[+1]_49 chr3:100119995-100120075 0.00023 25_[+1]_47 chr16:2771109-2771189 0.00025 68_[+1]_4 chr4:41937115-41937195 0.00025 21_[+1]_51 chr16:639284-639364 0.00025 18_[+1]_54 chr2:39005280-39005360 0.00026 31_[+1]_41 chr9:138853306-138853386 0.00026 24_[+1]_48 chr19:40477006-40477086 0.00029 51_[+1]_21 chr14:24912105-24912185 0.00032 11_[+1]_61 chr16:81779939-81780019 0.00032 34_[+1]_38 chr7:6865932-6866012 0.00032 13_[+1]_59 chr16:1832793-1832873 0.00035 5_[+1]_67 chr13:53191573-53191653 0.00035 3_[+1]_69 chr13:31191962-31192042 0.0004 52_[+1]_20 chr9:130700138-130700218 0.0004 44_[+1]_28 chr10:64564242-64564322 0.0004 32_[+1]_40 chr12:6798728-6798808 0.0004 2_[+1]_70 chr19:52643135-52643215 0.0004 48_[+1]_24 chr12:498490-498570 0.00041 14_[+1]_58 chr12:38710452-38710532 0.00041 59_[+1]_13 chr10:71930245-71930325 0.00043 15_[+1]_57 chr9:35103133-35103213 0.00043 54_[+1]_18 chr10:124713724-12471380 0.0005 [+1]_72 chr3:88198988-88199068 0.0005 18_[+1]_54 chr16:3162483-3162563 0.0005 9_[+1]_63 chr11:31391339-31391419 0.0005 45_[+1]_27 chr14:45604951-45605031 0.0005 17_[+1]_55 chr20:48532161-48532241 0.00055 34_[+1]_38 chr14:24658119-24658199 0.00059 63_[+1]_9 chr19:58258100-58258180 0.00059 41_[+1]_31 chr19:12780341-12780421 0.00063 40_[+1]_32 chr2:71357677-71357757 0.00067 6_[+1]_66 chr16:30087238-30087318 0.00067 44_[+1]_28 chr1:151371948-151372028 0.00067 29_[+1]_43 chr10:15001879-15001959 0.00067 55_[+1]_17 chr19:37263920-37264000 0.00067 60_[+1]_12 chr3:132379078-132379158 0.00067 43_[+1]_29 chr4:56719782-56719862 0.00074 46_[+1]_26 chr19:9517708-9517788 0.00083 47_[+1]_25 chr22:38453311-38453391 0.00083 4_[+1]_68 chr5:74062971-74063051 0.0009 37_[+1]_35 chr2:201753967-201754047 0.001 38_[+1]_34 chr16:89307629-89307709 0.0011 72_[+1] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCGGAAGT width=8 seqs=164 chr3:49893966-49894046 ( 43) CCGGAAGT 1 chr20:5093701-5093781 ( 25) CCGGAAGT 1 chr11:43902266-43902346 ( 28) CCGGAAGT 1 chr1:32110618-32110698 ( 54) CCGGAAGT 1 chr16:77225000-77225080 ( 25) CCGGAAGT 1 chr8:146176217-146176297 ( 37) CCGGAAGT 1 chr9:135282194-135282274 ( 14) CCGGAAGT 1 chr2:70121031-70121111 ( 43) CCGGAAGT 1 chr1:55230339-55230419 ( 67) CCGGAAGT 1 chr18:72265007-72265087 ( 52) CCGGAAGT 1 chr19:58071217-58071297 ( 4) CCGGAAGT 1 chr16:1823145-1823225 ( 3) CCGGAAGT 1 chr9:34620543-34620623 ( 52) CCGGAAGT 1 chr16:3156489-3156569 ( 51) CCGGAAGT 1 chr17:10600836-10600916 ( 51) CCGGAAGT 1 chr17:19281194-19281274 ( 42) CCGGAAGT 1 chr5:80597366-80597446 ( 17) CCGGAAGT 1 chr5:87564638-87564718 ( 26) CCGGAAGT 1 chr16:84220628-84220708 ( 34) CCGGAAGT 1 chr3:119217252-119217332 ( 66) CCGGAAGT 1 chr22:38082354-38082434 ( 3) CCGGAAGT 1 chr20:44486046-44486126 ( 1) CCGGAAGT 1 chr10:15902524-15902604 ( 35) CCGGAAGT 1 chr7:6617007-6617087 ( 27) CCGGAAGT 1 chr3:179065413-179065493 ( 62) CCGGAAGT 1 chr14:75469590-75469670 ( 32) CCGGAAGT 1 chr19:56186460-56186540 ( 16) CCGGAAGT 1 chr11:118122889-11812296 ( 14) CCGGAAGT 1 chr7:39663128-39663208 ( 30) CCGGAAGT 1 chr11:64085036-64085116 ( 66) CCGGAAGT 1 chrX:7895726-7895806 ( 27) CCGGAAGT 1 chr19:50379508-50379588 ( 21) CCGGAAGT 1 chr12:69864124-69864204 ( 29) CCGGAAGT 1 chr8:146052887-146052967 ( 15) CCGGAAGT 1 chr10:103347975-10334805 ( 54) CCGGAAGT 1 chr3:15469042-15469122 ( 30) CCGGAAGT 1 chr19:16296087-16296167 ( 18) CCGGAAGT 1 chr8:144718067-144718147 ( 38) CCGGAAGT 1 chr16:56485254-56485334 ( 2) CCGGAAGT 1 chr20:44993017-44993097 ( 28) CCGGAAGT 1 chr22:29949731-29949811 ( 8) CCGGAAGT 1 chr13:100150825-10015090 ( 42) CCGGAAGT 1 chr3:13493354-13493434 ( 22) CCGGAAGT 1 chr2:45838387-45838467 ( 35) CCGGAAGT 1 chr15:40675093-40675173 ( 36) CCGGAAGT 1 chr12:6602503-6602583 ( 38) CCGGAAGT 1 chr15:40331334-40331414 ( 34) CCGGAAGT 1 chr5:130506375-130506455 ( 17) CCGGAAGT 1 chr20:18548040-18548120 ( 25) CCGGAAGT 1 chr17:37844279-37844359 ( 54) CCGGAAGT 1 chr1:40506357-40506437 ( 26) CCGGAAGT 1 chr8:141474803-141474883 ( 45) CCGGAAGT 1 chr10:1102684-1102764 ( 59) CCGGAAGT 1 chr7:100861285-100861365 ( 4) CCGGAAGT 1 chr22:31556062-31556142 ( 72) CCGGAAGT 1 chr1:155112980-155113060 ( 33) CCGGAAGT 1 chr12:123459218-12345929 ( 1) CCGGAAGT 1 chr22:26908427-26908507 ( 28) CCGGAAAT 1 chr2:219536673-219536753 ( 45) CCGGAAAT 1 chr22:50683460-50683540 ( 15) CCGGAAAT 1 chr13:46038930-46039010 ( 32) CCGGAAAT 1 chr5:93954300-93954380 ( 19) CCGGAAAT 1 chr12:54582839-54582919 ( 27) CCGGAAAT 1 chr1:155990726-155990806 ( 18) CCGGAAAT 1 chr12:105630032-10563011 ( 15) CCGGAAAT 1 chr3:128880067-128880147 ( 8) CAGGAAGT 1 chr20:2644836-2644916 ( 7) CAGGAAGT 1 chr19:8617814-8617894 ( 54) CAGGAAGT 1 chr8:144287490-144287570 ( 39) CAGGAAGT 1 chr6:28220017-28220097 ( 37) CAGGAAGT 1 chr3:121468765-121468845 ( 65) CAGGAAGT 1 chr14:23938867-23938947 ( 20) CAGGAAGT 1 chr22:42078466-42078546 ( 7) CAGGAAGT 1 chr6:32143871-32143951 ( 38) CAGGAAGT 1 chr22:27068764-27068844 ( 30) CAGGAAGT 1 chr8:126575865-126575945 ( 34) CAGGAAGT 1 chr19:6393178-6393258 ( 39) CCGGAAGC 1 chr20:60962022-60962102 ( 3) CCGGAAGC 1 chr7:102988049-102988129 ( 50) CCGGAAGC 1 chr14:35452075-35452155 ( 60) CCGGAAGC 1 chrX:153775788-153775868 ( 45) CCGGAAGC 1 chr5:443210-443290 ( 52) CCGGAAGC 1 chr19:7069614-7069694 ( 44) CCGGAAGC 1 chr19:4182535-4182615 ( 54) CCGGAAGC 1 chr2:27994572-27994652 ( 6) CCGGAAGC 1 chr1:150039759-150039839 ( 40) CCGGAAGC 1 chr14:75179779-75179859 ( 46) CCGGAAGC 1 chr12:48551236-48551316 ( 55) CCGGAAGC 1 chr2:128051691-128051771 ( 50) CCGGAAGC 1 chr15:74988334-74988414 ( 16) CCGGAAGC 1 chr11:71823685-71823765 ( 40) CCGGAAGC 1 chr9:129567239-129567319 ( 14) CCGGAAGC 1 chr14:35761569-35761649 ( 17) CCGGAAGC 1 chr20:2489747-2489827 ( 71) CCGGAAGC 1 chr2:118845921-118846001 ( 53) CCGGAAGC 1 chr12:9102548-9102628 ( 46) GCGGAAGT 1 chr3:184081054-184081134 ( 54) GCGGAAGT 1 chr3:130465643-130465723 ( 46) GCGGAAGT 1 chr16:31085650-31085730 ( 42) GCGGAAGT 1 chr22:29784519-29784599 ( 28) GCGGAAGT 1 chr19:44439447-44439527 ( 63) GCGGAAGT 1 chr8:124780643-124780723 ( 17) GCGGAAGT 1 chr7:157129628-157129708 ( 27) GCGGAAGT 1 chr10:105156297-10515637 ( 60) ACGGAAGT 1 chr13:29233202-29233282 ( 53) ACGGAAGT 1 chr17:15587586-15587666 ( 38) ACGGAAGT 1 chr14:74353501-74353581 ( 49) CCGGAAGA 1 chr17:42264289-42264369 ( 69) CCGGAAGA 1 chrX:19003062-19003142 ( 63) CCGGAAGA 1 chr5:133702876-133702956 ( 27) CCGGAAGG 1 chr11:64037505-64037585 ( 27) CCGGAAGG 1 chr3:101280629-101280709 ( 35) CCGGAAGG 1 chr9:125693786-125693866 ( 43) CCGGAAGG 1 chr10:27443303-27443383 ( 19) CCGGAAGG 1 chr1:7887444-7887524 ( 30) CCGGAAGG 1 chr9:125675587-125675667 ( 70) CCGGAAGG 1 chr13:114103640-11410372 ( 39) CCGGAAGG 1 chr4:120221732-120221812 ( 32) CCGGAAAC 1 chr19:44716590-44716670 ( 28) CCGGAAAC 1 chrX:119077720-119077800 ( 30) CAGGAAGC 1 chr19:51728280-51728360 ( 65) CAGGAAGC 1 chr2:175260395-175260475 ( 24) CCGGAACT 1 chr3:100119995-100120075 ( 26) GCGGAAAT 1 chr16:2771109-2771189 ( 69) GAGGAAGT 1 chr4:41937115-41937195 ( 22) ACGGAAAT 1 chr16:639284-639364 ( 19) GAGGAAGT 1 chr2:39005280-39005360 ( 32) AAGGAAGT 1 chr9:138853306-138853386 ( 25) AAGGAAGT 1 chr19:40477006-40477086 ( 52) GCGGAAGC 1 chr14:24912105-24912185 ( 12) CCGGAAAA 1 chr16:81779939-81780019 ( 35) ACGGAAGC 1 chr7:6865932-6866012 ( 14) CCGGAAAA 1 chr16:1832793-1832873 ( 6) CCGGAAAG 1 chr13:53191573-53191653 ( 4) CCGGAAAG 1 chr13:31191962-31192042 ( 53) CAGGAAGG 1 chr9:130700138-130700218 ( 45) CCGGGAGT 1 chr10:64564242-64564322 ( 33) CCGGGAGT 1 chr12:6798728-6798808 ( 3) CCGGGAGT 1 chr19:52643135-52643215 ( 49) CCGGGAGT 1 chr12:498490-498570 ( 15) CAGGAAAC 1 chr12:38710452-38710532 ( 60) CAGGAAAC 1 chr10:71930245-71930325 ( 16) CCGGATGT 1 chr9:35103133-35103213 ( 55) CCGGATGT 1 chr10:124713724-12471380 ( 1) CCGGAACC 1 chr3:88198988-88199068 ( 19) CCGGAACC 1 chr16:3162483-3162563 ( 10) CCGGAACC 1 chr11:31391339-31391419 ( 46) GCGGAAGA 1 chr14:45604951-45605031 ( 18) CCGGAACC 1 chr20:48532161-48532241 ( 35) GCGGAAGG 1 chr14:24658119-24658199 ( 64) GCGGAAAC 1 chr19:58258100-58258180 ( 42) GCGGAAAC 1 chr19:12780341-12780421 ( 41) CCAGAAGT 1 chr2:71357677-71357757 ( 7) GCGGAACT 1 chr16:30087238-30087318 ( 45) GCGGAACT 1 chr1:151371948-151372028 ( 30) CAGGAAAA 1 chr10:15001879-15001959 ( 56) AAGGAAGC 1 chr19:37263920-37264000 ( 61) CAGGAAAA 1 chr3:132379078-132379158 ( 44) AAGGAAGC 1 chr4:56719782-56719862 ( 47) CCGGATAT 1 chr19:9517708-9517788 ( 48) CCGGGAGC 1 chr22:38453311-38453391 ( 5) CCGGGAGC 1 chr5:74062971-74063051 ( 38) GCGGAAAA 1 chr2:201753967-201754047 ( 39) ACGGAAAG 1 chr16:89307629-89307709 ( 73) GAGGAACT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.28309 E= 1.1e-169 -164 142 -134 -1400 -32 147 -1400 -1400 -496 -1400 169 -1400 -1400 -1400 170 -1400 234 -1400 -308 -1400 237 -1400 -1400 -341 -32 -265 137 -1400 -179 -44 -196 172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 164 E= 1.1e-169 0.060976 0.817073 0.121951 0.000000 0.152439 0.847561 0.000000 0.000000 0.006098 0.000000 0.993902 0.000000 0.000000 0.000000 1.000000 0.000000 0.963415 0.000000 0.036585 0.000000 0.981707 0.000000 0.000000 0.018293 0.152439 0.048780 0.798780 0.000000 0.054878 0.225610 0.079268 0.640244 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 regular expression -------------------------------------------------------------------------------- CCGGAAG[TC] -------------------------------------------------------------------------------- Time 4.85 secs. ******************************************************************************** ******************************************************************************** MOTIF ACTTCCGG MEME-2 width = 8 sites = 130 llr = 1086 E-value = 5.6e-133 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6::::::: pos.-specific C :8::aa:1 probability G 3:::::88 matrix T :1aa::21 bits 2.4 ** 2.2 ** 1.9 ** 1.7 **** Relative 1.4 **** Entropy 1.2 ***** (12.0 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel ACTTCCGG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:44435489-44435569 24 1.98e-05 TCCTCGATGT ACTTCCGG CTGGCCTGGG chr3:100119995-100120075 35 1.98e-05 GGCGGAAATC ACTTCCGG GTTAAGGGAA chr16:2892704-2892784 35 1.98e-05 GGTTCGCTAA ACTTCCGG TGGGCTCCAA chrX:70208418-70208498 42 1.98e-05 aagggtggta acttccgg gttgttgcca chr1:24117568-24117648 38 1.98e-05 CGGCCAGGCT ACTTCCGG CAGCGCGATG chr14:100842662-10084274 20 1.98e-05 GGACGGAACA ACTTCCGG CCCGACGGCG chr16:27280120-27280200 47 1.98e-05 TGAGTGACGC ACTTCCGG TTCTCCGTTT chr7:44240489-44240569 20 1.98e-05 GCTGCATTGT ACTTCCGG GCTCACATTT chr16:89307629-89307709 19 1.98e-05 agagcgaggg acttccgg ggggaaggga chr2:43447117-43447197 57 1.98e-05 CCGAGACCCA ACTTCCGG TCTCAAGAAA chr7:102988049-102988129 17 1.98e-05 AGCCCAATTT ACTTCCGG TGGGGAAGGG chr20:2644836-2644916 59 1.98e-05 CCGTACCCCG ACTTCCGG CCTGTACTGA chrX:153775788-153775868 20 1.98e-05 TTGTGTTTTT ACTTCCGG ATCCCACAGC chrX:108780037-108780117 46 1.98e-05 GGACCGAGCT ACTTCCGG GAGAGAATGG chr3:15419799-15419879 40 1.98e-05 agaggcagta acttccgg gtcgttgcca chr10:71930245-71930325 44 1.98e-05 CCTCCCCGGG ACTTCCGG GCGCGTAATG chr4:56719782-56719862 20 1.98e-05 TACGCGGTCA ACTTCCGG CGCGGAGTTT chr4:153701076-153701156 36 1.98e-05 CGGTCTCCTC ACTTCCGG CTTCGCTGCT chr3:119217252-119217332 19 1.98e-05 CAGCCAACTC ACTTCCGG GGGTGCACTC chr19:58258100-58258180 64 1.98e-05 TAAAGGTGGG ACTTCCGG CGTCCTCTA chr9:140118113-140118193 22 1.98e-05 GGTGGGCGGG ACTTCCGG CGCCTGCGCA chr5:158690219-158690299 42 1.98e-05 CAAACCACCC ACTTCCGG TTTTTCAGCC chr19:11039367-11039447 30 1.98e-05 TTGGGAAGCC ACTTCCGG TAAAGTTGGC chr10:124713724-12471380 65 1.98e-05 AGGCAAAGCG ACTTCCGG CTCACTCC chr3:101280629-101280709 54 1.98e-05 AGAGGGCGGA ACTTCCGG CTGAGCCCCA chr2:128051691-128051771 36 1.98e-05 CTCTGGGGGG ACTTCCGG CTCAATCCGG chr15:74988334-74988414 57 1.98e-05 CCGTGAGGTC ACTTCCGG CGCGACACCT chr22:29784519-29784599 55 1.98e-05 GCGCGCGGGT ACTTCCGG TGGACGCAAG chr4:41937115-41937195 39 1.98e-05 TGAAAGGAGC ACTTCCGG GTTCGGCAAT chr11:64085036-64085116 21 1.98e-05 CCGCTGCCTC ACTTCCGG GGATGCTCCT chr9:35103133-35103213 63 1.98e-05 CCCCGGATGT ACTTCCGG CAGCTCCCTC chr10:27443303-27443383 47 1.98e-05 ACTCAACAGT ACTTCCGG GGCAAGTGAG chr22:46731538-46731618 64 1.98e-05 CCGGGGCGGG ACTTCCGG CAAGGCGCG chr12:6798728-6798808 20 1.98e-05 TGGCTGGAAC ACTTCCGG CGCCGCTAGC chr13:29233202-29233282 20 1.98e-05 GGACGGACGC ACTTCCGG CGGATGTGGG chr14:35761569-35761649 35 1.98e-05 AGTCGCTGCA ACTTCCGG GAGGTGCTTG chr12:56223375-56223455 45 1.98e-05 GCCTACTTCC ACTTCCGG GGTCACCAGG chr8:143751384-143751464 53 1.98e-05 TCCCCCAGCT ACTTCCGG GACGCTCTAG chr5:68855970-68856050 23 1.98e-05 CGGCGGAATG ACTTCCGG GGCGCCCCTA chr17:37844279-37844359 41 1.98e-05 TGAAGCTTCC ACTTCCGG AGTAACCGGA chr20:19997930-19998010 51 1.98e-05 GCTCCGGGAG ACTTCCGG CAGGGCGGGC chr10:1102684-1102764 46 1.98e-05 CTGGGGCGGG ACTTCCGG CGACACCGGA chr7:5553415-5553495 20 1.98e-05 GGCTCTCGTC ACTTCCGG CGCCCGCCTA chr3:49893966-49894046 28 3.22e-05 CCGCAGCACG ACTTCCTG GAGCGGGCCG chr14:74353501-74353581 12 3.22e-05 GGTCAGCCAA ACTTCCTG TCCCGCGCTC chr3:48481560-48481640 38 3.22e-05 CGAGAGTTCA ACTTCCTG ACTAGGAGCC chr5:271489-271569 23 3.22e-05 GTGCTCCATC ACTTCCTG TCCCAGGTCG chr12:16035273-16035353 55 3.22e-05 TTACGTCGTC ACTTCCTG CCGATGCCGG chr6:28220017-28220097 64 3.22e-05 AACTAAGGCC ACTTCCTG GGCGCTCTA chr3:130465643-130465723 31 3.22e-05 GTCTGACCTC ACTTCCTG TCGCCGAGCG chrX:2548962-2549042 70 3.22e-05 GGATAATAGC ACTTCCTG GTT chrX:2548735-2548815 15 3.22e-05 ACATTGCCAC ACTTCCTG GTTCATCCAG chr13:41837674-41837754 43 3.22e-05 GATCACGTTC ACTTCCTG GTTCACTTCT chr1:12142006-12142086 32 3.22e-05 ctcttgcctc acttcctg cttcccttct chr19:55663511-55663591 5 3.22e-05 CAGC Acttcctg tctccctcat chr17:42264289-42264369 33 3.22e-05 CGGAGGCGGG ACTTCCTG TCCCTGGTAT chrX:21857633-21857713 21 4.48e-05 CCCCCGTGCC ATTTCCGG TACTAGCAAA chr17:10600836-10600916 27 4.48e-05 CCTCCCCGCG ATTTCCGG TAGCGTTCCG chr2:230786085-230786165 27 4.48e-05 CCCTTTCCCG ATTTCCGG GCCCCTCGTC chr1:160001759-160001839 46 4.48e-05 CGGAGGCGGG ATTTCCGG TCCGTGGGAG chr8:124780643-124780723 42 4.48e-05 GCCCAGAGCC ATTTCCGG CGGCCCGAAA chr19:9938510-9938590 39 7.70e-05 TAGGGGCAGG GCTTCCGG CCTCGAACTT chr11:45939415-45939495 26 7.70e-05 CCTCCTTCCT GCTTCCGG TCTTAGGCCC chr5:167913398-167913478 42 7.70e-05 GGGGGTTTCC GCTTCCGG GAGAGGCTGA chr17:1227613-1227693 24 7.70e-05 ATCGCCTCCT GCTTCCGG GGTCATCGCC chr10:44101808-44101888 54 7.70e-05 AGCCACTTCC GCTTCCGG TCCAGCCTGT chr5:443210-443290 36 7.70e-05 CCGGACCCGT GCTTCCGG CGCCGTTGCC chr19:9879396-9879476 43 7.70e-05 TGGCACTTCC GCTTCCGG TTGCGCACGG chr5:80597366-80597446 47 7.70e-05 GGCACTATGT GCTTCCGG TCTCCAATAC chr14:75179779-75179859 27 7.70e-05 AGGAGTTTCC GCTTCCGG GCTATCCTTT chr3:179065413-179065493 20 7.70e-05 GCATAGATGC GCTTCCGG CCACGGAGCC chr14:21852195-21852275 22 7.70e-05 TGCCCTTTCC GCTTCCGG GTCCCAACAG chr10:102747246-10274732 19 7.70e-05 AAACCTCGAG GCTTCCGG TTCCGGGACG chr5:93954300-93954380 36 7.70e-05 TGGTACTATC GCTTCCGG GGCTGCCTAG chr3:178865834-178865914 66 7.70e-05 TTGCGCATCT GCTTCCGG GGGATTG chr19:37263920-37264000 72 7.70e-05 AGGAAAACGT GCTTCCGG T chr12:6602503-6602583 22 7.70e-05 CCGCCTCAGT GCTTCCGG TCCGCCTGCC chr13:41345309-41345389 42 7.70e-05 CCTCTCTTCC GCTTCCGG CCTGGCGCCT chr1:33116141-33116221 11 9.66e-05 TAGACACTCT ACTTCCGC CCTTCATCCA chr1:151371948-151372028 62 9.66e-05 CTGAAGGATC ACTTCCGC TTCCGTTGGC chr2:203103260-203103340 34 9.66e-05 GGCTGCAGTA ACTTCCGC TACGCCTCGC chr2:133104978-133105058 10 9.66e-05 AGTCGGGTA ACTTCCGC TCTAGGAGGC chr3:88198988-88199068 71 9.66e-05 TTTGGCGATT ACTTCCGC CC chr2:201753967-201754047 51 9.66e-05 GGAAAGGACC ACTTCCGC CCAGCTCTCC chr22:38453311-38453391 73 9.66e-05 GAAAGCCGGG ACTTCCGC chr15:40675093-40675173 21 9.66e-05 ATTCCCACCC ACTTCCGC CTAGCTACCG chr15:40331334-40331414 61 9.66e-05 GCTGGGCGGG ACTTCCGC TACTAGACTT chr9:104296012-104296092 28 9.66e-05 TCCGTACGTC ACTTCCGC CCGGCGGGGT chr19:40477006-40477086 36 1.17e-04 TCAGCCAGGG ACTTCCGT TGTCGTCAGC chr5:74062971-74063051 16 1.17e-04 CCTGCCAGCA ACTTCCGT CCTCCTAGCT chr14:24658119-24658199 34 1.17e-04 CGGCTCCTCC ACTTCCGT TAGGCTGAGC chr19:14800768-14800848 63 1.17e-04 AGCCACAGCC ACTTCCGT TCCCGGCGGC chr19:9517708-9517788 38 1.17e-04 TACGGCATTC ACTTCCGT TTCCGGGAGC chr1:2187572-2187652 64 1.17e-04 TCCTGACCTC ATTTCCTG TCTGGAGCA chr1:2187372-2187452 25 1.17e-04 TCCTGACCTC ATTTCCTG TCTGTGCCAC chr7:157129628-157129708 65 1.17e-04 CGCGTGACGC ATTTCCTG TTTGTTGT chr2:174830142-174830222 69 1.37e-04 CAGGCGGCGC GCTTCCTG TTTG chr7:44084168-44084248 51 1.37e-04 TACCATTTCC GCTTCCTG CCGTGGGGCG chr19:51728280-51728360 7 1.37e-04 TCCCCA GCTTCCTG TCCGGCCCTG chr22:31556062-31556142 8 1.37e-04 TTCCTCC GCTTCCTG CCCGCAGGCG chr19:51963856-51963936 34 1.37e-04 ttccctgttt gcttcctg gacaaagttc chr2:71357677-71357757 61 1.58e-04 TTGCCGCGCG GTTTCCGG GCGGCTCCCT chr19:2950606-2950686 57 1.58e-04 GGATGCTTCC GTTTCCGG TTCCGGGGCG chr2:70121031-70121111 63 1.58e-04 TTGCACAGTT GTTTCCGG GAAGCGGGAC chr8:146052887-146052967 58 1.58e-04 GCCAAGGCCC GTTTCCGG CGGCGTCGCG chr9:129567239-129567319 54 1.58e-04 ACCGGGAAGC GTTTCCGG GGGCTGAAGG chr6:32143871-32143951 23 1.58e-04 ACGCCTGCTG GTTTCCGG GGCCGGCCAG chr13:52768555-52768635 37 1.58e-04 GCTCTCCTCC GTTTCCGG TCTGGCTTGT chr14:21458075-21458155 64 1.58e-04 CTGTATTTCC GTTTCCGG TTCGCCTCC chr5:87564638-87564718 13 1.78e-04 AAAGAGAGGG TCTTCCGG CTCTGCCGGA chr16:84220628-84220708 20 1.78e-04 CTACCCACGG TCTTCCGG TTTGGACCGG chr20:55685493-55685573 26 1.78e-04 CTGTGCTAAG TCTTCCGG CTGGGCGTGT chr9:130700138-130700218 18 1.78e-04 GGGTCCACGC TCTTCCGG CTTTGGACTG chr2:45838387-45838467 72 1.78e-04 CCGCCTCGCT TCTTCCGG A chr16:30087238-30087318 63 2.43e-04 GGCCTCCTTT GCTTCCGC GGCGGGGCCG chr22:40742476-40742556 36 2.43e-04 CCAGGTTTCC GCTTCCGC TCTTCCCTGG chr12:105630032-10563011 34 2.43e-04 TGGCGCCCGC GCTTCCGC CTGCGCTCGC chr1:155112980-155113060 60 2.43e-04 TTCACGTTCC GCTTCCGC GCGGCCTTCT chr20:2489747-2489827 55 2.43e-04 CTCTGCGGCA GCTTCCGC AGGCGCTTCC chr9:135282194-135282274 57 2.82e-04 TAGTGCGTCG CCTTCCGG CCCCCTCGGC chr5:130506375-130506455 58 2.82e-04 CGTCCAGGTG ATTTCCGT TCTCTTCTGG chr17:61627722-61627802 68 3.16e-04 GGGTCCGGCG GCTTCCGT TCCGA chr8:146176217-146176297 54 3.86e-04 TCCCGCCCCG AATTCCGG CCCGCCGCTC chr2:175260395-175260475 54 3.86e-04 GCAAGGGGGA ACTTCCGA GATCAAAGGT chr11:62495861-62495941 52 3.86e-04 ACTCCCTTCT ACTTCCAG GTCGGGGGGG chr1:11862812-11862892 3 4.31e-04 CT CCTTCCTG CCCCCTCCGG chr8:182397-182477 64 4.31e-04 CACGCAGTTC CCTTCCTG CGGCGTCCT chr9:35812266-35812346 29 5.04e-04 GGGAGGTCCG CTTTCCGG TCCCGGCGGC chr19:58071217-58071297 44 5.58e-04 CTGCCACGCC TTTTCCTG CGCCGGCCCA chr9:125675587-125675667 21 5.58e-04 GGAAGAAAAC ACATCCGG TGCCAACCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:44435489-44435569 2e-05 23_[+2]_49 chr3:100119995-100120075 2e-05 34_[+2]_38 chr16:2892704-2892784 2e-05 34_[+2]_38 chrX:70208418-70208498 2e-05 41_[+2]_31 chr1:24117568-24117648 2e-05 37_[+2]_35 chr14:100842662-10084274 2e-05 19_[+2]_53 chr16:27280120-27280200 2e-05 46_[+2]_26 chr7:44240489-44240569 2e-05 19_[+2]_53 chr16:89307629-89307709 2e-05 18_[+2]_54 chr2:43447117-43447197 2e-05 56_[+2]_16 chr7:102988049-102988129 2e-05 16_[+2]_56 chr20:2644836-2644916 2e-05 58_[+2]_14 chrX:153775788-153775868 2e-05 19_[+2]_53 chrX:108780037-108780117 2e-05 45_[+2]_27 chr3:15419799-15419879 2e-05 39_[+2]_33 chr10:71930245-71930325 2e-05 43_[+2]_29 chr4:56719782-56719862 2e-05 19_[+2]_53 chr4:153701076-153701156 2e-05 35_[+2]_37 chr3:119217252-119217332 2e-05 18_[+2]_54 chr19:58258100-58258180 2e-05 63_[+2]_9 chr9:140118113-140118193 2e-05 21_[+2]_51 chr5:158690219-158690299 2e-05 41_[+2]_31 chr19:11039367-11039447 2e-05 29_[+2]_43 chr10:124713724-12471380 2e-05 64_[+2]_8 chr3:101280629-101280709 2e-05 53_[+2]_19 chr2:128051691-128051771 2e-05 35_[+2]_37 chr15:74988334-74988414 2e-05 56_[+2]_16 chr22:29784519-29784599 2e-05 54_[+2]_18 chr4:41937115-41937195 2e-05 38_[+2]_34 chr11:64085036-64085116 2e-05 20_[+2]_52 chr9:35103133-35103213 2e-05 62_[+2]_10 chr10:27443303-27443383 2e-05 46_[+2]_26 chr22:46731538-46731618 2e-05 63_[+2]_9 chr12:6798728-6798808 2e-05 19_[+2]_53 chr13:29233202-29233282 2e-05 19_[+2]_53 chr14:35761569-35761649 2e-05 34_[+2]_38 chr12:56223375-56223455 2e-05 44_[+2]_28 chr8:143751384-143751464 2e-05 52_[+2]_20 chr5:68855970-68856050 2e-05 22_[+2]_50 chr17:37844279-37844359 2e-05 40_[+2]_32 chr20:19997930-19998010 2e-05 50_[+2]_22 chr10:1102684-1102764 2e-05 45_[+2]_27 chr7:5553415-5553495 2e-05 19_[+2]_53 chr3:49893966-49894046 3.2e-05 27_[+2]_45 chr14:74353501-74353581 3.2e-05 11_[+2]_61 chr3:48481560-48481640 3.2e-05 37_[+2]_35 chr5:271489-271569 3.2e-05 22_[+2]_50 chr12:16035273-16035353 3.2e-05 54_[+2]_18 chr6:28220017-28220097 3.2e-05 63_[+2]_9 chr3:130465643-130465723 3.2e-05 30_[+2]_42 chrX:2548962-2549042 3.2e-05 69_[+2]_3 chrX:2548735-2548815 3.2e-05 14_[+2]_58 chr13:41837674-41837754 3.2e-05 42_[+2]_30 chr1:12142006-12142086 3.2e-05 31_[+2]_41 chr19:55663511-55663591 3.2e-05 4_[+2]_68 chr17:42264289-42264369 3.2e-05 32_[+2]_40 chrX:21857633-21857713 4.5e-05 20_[+2]_52 chr17:10600836-10600916 4.5e-05 26_[+2]_46 chr2:230786085-230786165 4.5e-05 26_[+2]_46 chr1:160001759-160001839 4.5e-05 45_[+2]_27 chr8:124780643-124780723 4.5e-05 41_[+2]_31 chr19:9938510-9938590 7.7e-05 38_[+2]_34 chr11:45939415-45939495 7.7e-05 25_[+2]_47 chr5:167913398-167913478 7.7e-05 41_[+2]_31 chr17:1227613-1227693 7.7e-05 23_[+2]_49 chr10:44101808-44101888 7.7e-05 53_[+2]_19 chr5:443210-443290 7.7e-05 35_[+2]_37 chr19:9879396-9879476 7.7e-05 42_[+2]_30 chr5:80597366-80597446 7.7e-05 46_[+2]_26 chr14:75179779-75179859 7.7e-05 26_[+2]_46 chr3:179065413-179065493 7.7e-05 19_[+2]_53 chr14:21852195-21852275 7.7e-05 21_[+2]_51 chr10:102747246-10274732 7.7e-05 18_[+2]_54 chr5:93954300-93954380 7.7e-05 35_[+2]_37 chr3:178865834-178865914 7.7e-05 65_[+2]_7 chr19:37263920-37264000 7.7e-05 71_[+2]_1 chr12:6602503-6602583 7.7e-05 21_[+2]_51 chr13:41345309-41345389 7.7e-05 41_[+2]_31 chr1:33116141-33116221 9.7e-05 10_[+2]_62 chr1:151371948-151372028 9.7e-05 61_[+2]_11 chr2:203103260-203103340 9.7e-05 33_[+2]_39 chr2:133104978-133105058 9.7e-05 9_[+2]_63 chr3:88198988-88199068 9.7e-05 70_[+2]_2 chr2:201753967-201754047 9.7e-05 50_[+2]_22 chr22:38453311-38453391 9.7e-05 72_[+2] chr15:40675093-40675173 9.7e-05 20_[+2]_52 chr15:40331334-40331414 9.7e-05 60_[+2]_12 chr9:104296012-104296092 9.7e-05 27_[+2]_45 chr19:40477006-40477086 0.00012 35_[+2]_37 chr5:74062971-74063051 0.00012 15_[+2]_57 chr14:24658119-24658199 0.00012 33_[+2]_39 chr19:14800768-14800848 0.00012 62_[+2]_10 chr19:9517708-9517788 0.00012 37_[+2]_35 chr1:2187572-2187652 0.00012 63_[+2]_9 chr1:2187372-2187452 0.00012 24_[+2]_48 chr7:157129628-157129708 0.00012 64_[+2]_8 chr2:174830142-174830222 0.00014 68_[+2]_4 chr7:44084168-44084248 0.00014 50_[+2]_22 chr19:51728280-51728360 0.00014 6_[+2]_66 chr22:31556062-31556142 0.00014 7_[+2]_65 chr19:51963856-51963936 0.00014 33_[+2]_39 chr2:71357677-71357757 0.00016 60_[+2]_12 chr19:2950606-2950686 0.00016 56_[+2]_16 chr2:70121031-70121111 0.00016 62_[+2]_10 chr8:146052887-146052967 0.00016 57_[+2]_15 chr9:129567239-129567319 0.00016 53_[+2]_19 chr6:32143871-32143951 0.00016 22_[+2]_50 chr13:52768555-52768635 0.00016 36_[+2]_36 chr14:21458075-21458155 0.00016 63_[+2]_9 chr5:87564638-87564718 0.00018 12_[+2]_60 chr16:84220628-84220708 0.00018 19_[+2]_53 chr20:55685493-55685573 0.00018 25_[+2]_47 chr9:130700138-130700218 0.00018 17_[+2]_55 chr2:45838387-45838467 0.00018 71_[+2]_1 chr16:30087238-30087318 0.00024 62_[+2]_10 chr22:40742476-40742556 0.00024 35_[+2]_37 chr12:105630032-10563011 0.00024 33_[+2]_39 chr1:155112980-155113060 0.00024 59_[+2]_13 chr20:2489747-2489827 0.00024 54_[+2]_18 chr9:135282194-135282274 0.00028 56_[+2]_16 chr5:130506375-130506455 0.00028 57_[+2]_15 chr17:61627722-61627802 0.00032 67_[+2]_5 chr8:146176217-146176297 0.00039 53_[+2]_19 chr2:175260395-175260475 0.00039 53_[+2]_19 chr11:62495861-62495941 0.00039 51_[+2]_21 chr1:11862812-11862892 0.00043 2_[+2]_70 chr8:182397-182477 0.00043 63_[+2]_9 chr9:35812266-35812346 0.0005 28_[+2]_44 chr19:58071217-58071297 0.00056 43_[+2]_29 chr9:125675587-125675667 0.00056 20_[+2]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTTCCGG width=8 seqs=130 chr1:44435489-44435569 ( 24) ACTTCCGG 1 chr3:100119995-100120075 ( 35) ACTTCCGG 1 chr16:2892704-2892784 ( 35) ACTTCCGG 1 chrX:70208418-70208498 ( 42) ACTTCCGG 1 chr1:24117568-24117648 ( 38) ACTTCCGG 1 chr14:100842662-10084274 ( 20) ACTTCCGG 1 chr16:27280120-27280200 ( 47) ACTTCCGG 1 chr7:44240489-44240569 ( 20) ACTTCCGG 1 chr16:89307629-89307709 ( 19) ACTTCCGG 1 chr2:43447117-43447197 ( 57) ACTTCCGG 1 chr7:102988049-102988129 ( 17) ACTTCCGG 1 chr20:2644836-2644916 ( 59) ACTTCCGG 1 chrX:153775788-153775868 ( 20) ACTTCCGG 1 chrX:108780037-108780117 ( 46) ACTTCCGG 1 chr3:15419799-15419879 ( 40) ACTTCCGG 1 chr10:71930245-71930325 ( 44) ACTTCCGG 1 chr4:56719782-56719862 ( 20) ACTTCCGG 1 chr4:153701076-153701156 ( 36) ACTTCCGG 1 chr3:119217252-119217332 ( 19) ACTTCCGG 1 chr19:58258100-58258180 ( 64) ACTTCCGG 1 chr9:140118113-140118193 ( 22) ACTTCCGG 1 chr5:158690219-158690299 ( 42) ACTTCCGG 1 chr19:11039367-11039447 ( 30) ACTTCCGG 1 chr10:124713724-12471380 ( 65) ACTTCCGG 1 chr3:101280629-101280709 ( 54) ACTTCCGG 1 chr2:128051691-128051771 ( 36) ACTTCCGG 1 chr15:74988334-74988414 ( 57) ACTTCCGG 1 chr22:29784519-29784599 ( 55) ACTTCCGG 1 chr4:41937115-41937195 ( 39) ACTTCCGG 1 chr11:64085036-64085116 ( 21) ACTTCCGG 1 chr9:35103133-35103213 ( 63) ACTTCCGG 1 chr10:27443303-27443383 ( 47) ACTTCCGG 1 chr22:46731538-46731618 ( 64) ACTTCCGG 1 chr12:6798728-6798808 ( 20) ACTTCCGG 1 chr13:29233202-29233282 ( 20) ACTTCCGG 1 chr14:35761569-35761649 ( 35) ACTTCCGG 1 chr12:56223375-56223455 ( 45) ACTTCCGG 1 chr8:143751384-143751464 ( 53) ACTTCCGG 1 chr5:68855970-68856050 ( 23) ACTTCCGG 1 chr17:37844279-37844359 ( 41) ACTTCCGG 1 chr20:19997930-19998010 ( 51) ACTTCCGG 1 chr10:1102684-1102764 ( 46) ACTTCCGG 1 chr7:5553415-5553495 ( 20) ACTTCCGG 1 chr3:49893966-49894046 ( 28) ACTTCCTG 1 chr14:74353501-74353581 ( 12) ACTTCCTG 1 chr3:48481560-48481640 ( 38) ACTTCCTG 1 chr5:271489-271569 ( 23) ACTTCCTG 1 chr12:16035273-16035353 ( 55) ACTTCCTG 1 chr6:28220017-28220097 ( 64) ACTTCCTG 1 chr3:130465643-130465723 ( 31) ACTTCCTG 1 chrX:2548962-2549042 ( 70) ACTTCCTG 1 chrX:2548735-2548815 ( 15) ACTTCCTG 1 chr13:41837674-41837754 ( 43) ACTTCCTG 1 chr1:12142006-12142086 ( 32) ACTTCCTG 1 chr19:55663511-55663591 ( 5) ACTTCCTG 1 chr17:42264289-42264369 ( 33) ACTTCCTG 1 chrX:21857633-21857713 ( 21) ATTTCCGG 1 chr17:10600836-10600916 ( 27) ATTTCCGG 1 chr2:230786085-230786165 ( 27) ATTTCCGG 1 chr1:160001759-160001839 ( 46) ATTTCCGG 1 chr8:124780643-124780723 ( 42) ATTTCCGG 1 chr19:9938510-9938590 ( 39) GCTTCCGG 1 chr11:45939415-45939495 ( 26) GCTTCCGG 1 chr5:167913398-167913478 ( 42) GCTTCCGG 1 chr17:1227613-1227693 ( 24) GCTTCCGG 1 chr10:44101808-44101888 ( 54) GCTTCCGG 1 chr5:443210-443290 ( 36) GCTTCCGG 1 chr19:9879396-9879476 ( 43) GCTTCCGG 1 chr5:80597366-80597446 ( 47) GCTTCCGG 1 chr14:75179779-75179859 ( 27) GCTTCCGG 1 chr3:179065413-179065493 ( 20) GCTTCCGG 1 chr14:21852195-21852275 ( 22) GCTTCCGG 1 chr10:102747246-10274732 ( 19) GCTTCCGG 1 chr5:93954300-93954380 ( 36) GCTTCCGG 1 chr3:178865834-178865914 ( 66) GCTTCCGG 1 chr19:37263920-37264000 ( 72) GCTTCCGG 1 chr12:6602503-6602583 ( 22) GCTTCCGG 1 chr13:41345309-41345389 ( 42) GCTTCCGG 1 chr1:33116141-33116221 ( 11) ACTTCCGC 1 chr1:151371948-151372028 ( 62) ACTTCCGC 1 chr2:203103260-203103340 ( 34) ACTTCCGC 1 chr2:133104978-133105058 ( 10) ACTTCCGC 1 chr3:88198988-88199068 ( 71) ACTTCCGC 1 chr2:201753967-201754047 ( 51) ACTTCCGC 1 chr22:38453311-38453391 ( 73) ACTTCCGC 1 chr15:40675093-40675173 ( 21) ACTTCCGC 1 chr15:40331334-40331414 ( 61) ACTTCCGC 1 chr9:104296012-104296092 ( 28) ACTTCCGC 1 chr19:40477006-40477086 ( 36) ACTTCCGT 1 chr5:74062971-74063051 ( 16) ACTTCCGT 1 chr14:24658119-24658199 ( 34) ACTTCCGT 1 chr19:14800768-14800848 ( 63) ACTTCCGT 1 chr19:9517708-9517788 ( 38) ACTTCCGT 1 chr1:2187572-2187652 ( 64) ATTTCCTG 1 chr1:2187372-2187452 ( 25) ATTTCCTG 1 chr7:157129628-157129708 ( 65) ATTTCCTG 1 chr2:174830142-174830222 ( 69) GCTTCCTG 1 chr7:44084168-44084248 ( 51) GCTTCCTG 1 chr19:51728280-51728360 ( 7) GCTTCCTG 1 chr22:31556062-31556142 ( 8) GCTTCCTG 1 chr19:51963856-51963936 ( 34) GCTTCCTG 1 chr2:71357677-71357757 ( 61) GTTTCCGG 1 chr19:2950606-2950686 ( 57) GTTTCCGG 1 chr2:70121031-70121111 ( 63) GTTTCCGG 1 chr8:146052887-146052967 ( 58) GTTTCCGG 1 chr9:129567239-129567319 ( 54) GTTTCCGG 1 chr6:32143871-32143951 ( 23) GTTTCCGG 1 chr13:52768555-52768635 ( 37) GTTTCCGG 1 chr14:21458075-21458155 ( 64) GTTTCCGG 1 chr5:87564638-87564718 ( 13) TCTTCCGG 1 chr16:84220628-84220708 ( 20) TCTTCCGG 1 chr20:55685493-55685573 ( 26) TCTTCCGG 1 chr9:130700138-130700218 ( 18) TCTTCCGG 1 chr2:45838387-45838467 ( 72) TCTTCCGG 1 chr16:30087238-30087318 ( 63) GCTTCCGC 1 chr22:40742476-40742556 ( 36) GCTTCCGC 1 chr12:105630032-10563011 ( 34) GCTTCCGC 1 chr1:155112980-155113060 ( 60) GCTTCCGC 1 chr20:2489747-2489827 ( 55) GCTTCCGC 1 chr9:135282194-135282274 ( 57) CCTTCCGG 1 chr5:130506375-130506455 ( 58) ATTTCCGT 1 chr17:61627722-61627802 ( 68) GCTTCCGT 1 chr8:146176217-146176297 ( 54) AATTCCGG 1 chr2:175260395-175260475 ( 54) ACTTCCGA 1 chr11:62495861-62495941 ( 52) ACTTCCAG 1 chr1:11862812-11862892 ( 3) CCTTCCTG 1 chr8:182397-182477 ( 64) CCTTCCTG 1 chr9:35812266-35812346 ( 29) CTTTCCGG 1 chr19:58071217-58071297 ( 44) TTTTCCTG 1 chr9:125675587-125675667 ( 21) ACATCCGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.87896 E= 5.6e-133 177 -331 -16 -208 -462 147 -1367 -42 -462 -1367 -1367 235 -1367 -1367 -1367 236 -1367 171 -1367 -1367 -1367 171 -1367 -1367 -462 -1367 139 -8 -462 -141 141 -186 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 130 E= 5.6e-133 0.646154 0.030769 0.276923 0.046154 0.007692 0.846154 0.000000 0.146154 0.007692 0.000000 0.000000 0.992308 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.007692 0.000000 0.807692 0.184615 0.007692 0.115385 0.823077 0.053846 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCGG MEME-2 regular expression -------------------------------------------------------------------------------- [AG]CTTCCGG -------------------------------------------------------------------------------- Time 8.25 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAAHAAA MEME-3 width = 8 sites = 11 llr = 112 E-value = 2.1e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 999a498a pos.-specific C ::::4::: probability G :1::::2: matrix T 1:1:31:: bits 2.4 * * 2.2 * * 1.9 **** * * 1.7 **** *** Relative 1.4 **** *** Entropy 1.2 **** *** (14.7 bits) 1.0 **** *** 0.7 **** *** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AAAAAAAA consensus C sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:2489747-2489827 18 1.70e-06 CCCATTCTGC AAAAAAAA GACTACACTC chr19:58258100-58258180 25 3.44e-06 ATGAGGGCTC AAAATAAA GGCGTTTCCG chr19:49955122-49955202 73 3.44e-06 GCATCAATCA AAAATAAA chr4:113152672-113152752 21 6.18e-06 AAGGTCCAAC AAAACAAA CGTCCGCACG chr14:45604951-45605031 7 6.18e-06 TTTGTT AAAACAAA ACACCGGAAC chr8:141474803-141474883 28 8.94e-06 ACAAGGCTGA AAAAAAGA GGGGAGCGAC chrX:21857633-21857713 2 1.70e-05 C AAAAATAA GCCCCCGTGC chr2:39005280-39005360 12 2.15e-05 GTAGGACTAC AAAACAGA GGTTTCTGGG chrX:119077720-119077800 50 2.68e-05 TGTGTGCATC AATATAAA TAAGCCGGTG chr2:175260395-175260475 3 3.80e-05 CG TAAACAAA CTCAGCCGCC chr17:63119396-63119476 55 3.80e-05 ACCCTCCAGC AGAAAAAA CCCCGCAAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:2489747-2489827 1.7e-06 17_[+3]_55 chr19:58258100-58258180 3.4e-06 24_[+3]_48 chr19:49955122-49955202 3.4e-06 72_[+3] chr4:113152672-113152752 6.2e-06 20_[+3]_52 chr14:45604951-45605031 6.2e-06 6_[+3]_66 chr8:141474803-141474883 8.9e-06 27_[+3]_45 chrX:21857633-21857713 1.7e-05 1_[+3]_71 chr2:39005280-39005360 2.1e-05 11_[+3]_61 chrX:119077720-119077800 2.7e-05 49_[+3]_23 chr2:175260395-175260475 3.8e-05 2_[+3]_70 chr17:63119396-63119476 3.8e-05 54_[+3]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAAHAAA width=8 seqs=11 chr20:2489747-2489827 ( 18) AAAAAAAA 1 chr19:58258100-58258180 ( 25) AAAATAAA 1 chr19:49955122-49955202 ( 73) AAAATAAA 1 chr4:113152672-113152752 ( 21) AAAACAAA 1 chr14:45604951-45605031 ( 7) AAAACAAA 1 chr8:141474803-141474883 ( 28) AAAAAAGA 1 chrX:21857633-21857713 ( 2) AAAAATAA 1 chr2:39005280-39005360 ( 12) AAAACAGA 1 chrX:119077720-119077800 ( 50) AATATAAA 1 chr2:175260395-175260475 ( 3) TAAACAAA 1 chr17:63119396-63119476 ( 55) AGAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.2293 E= 2.1e+001 226 -1010 -1010 -110 226 -1010 -176 -1010 226 -1010 -1010 -110 240 -1010 -1010 -1010 94 25 -1010 48 226 -1010 -1010 -110 211 -1010 -76 -1010 240 -1010 -1010 -1010 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 11 E= 2.1e+001 0.909091 0.000000 0.000000 0.090909 0.909091 0.000000 0.090909 0.000000 0.909091 0.000000 0.000000 0.090909 1.000000 0.000000 0.000000 0.000000 0.363636 0.363636 0.000000 0.272727 0.909091 0.000000 0.000000 0.090909 0.818182 0.000000 0.181818 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAAHAAA MEME-3 regular expression -------------------------------------------------------------------------------- AAAA[ACT]AAA -------------------------------------------------------------------------------- Time 11.58 secs. ******************************************************************************** ******************************************************************************** MOTIF GGAAGTRG MEME-4 width = 8 sites = 59 llr = 424 E-value = 8.6e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::aa2232 pos.-specific C :::::1:2 probability G aa::8245 matrix T :::::521 bits 2.4 ** 2.2 ** 1.9 ** 1.7 **** Relative 1.4 **** Entropy 1.2 ***** (10.4 bits) 1.0 ***** 0.7 ***** 0.5 ******* 0.2 ******** 0.0 -------- Multilevel GGAAGTGG consensus GAA sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:135282194-135282274 39 1.22e-05 TTGAGGAAGC GGAAGTAG TAGTGCGTCG chr14:35452075-35452155 68 1.22e-05 CCCCGGAAGC GGAAGTAG ATTCT chr16:56485254-56485334 32 1.22e-05 TCTGGCGGCA GGAAGTAG AGGGGCGGTG chr5:133702876-133702956 35 3.20e-05 ACCCGGAAGG GGAAGTGG GAAGAAACGG chrX:7895726-7895806 62 3.20e-05 TCTGTTTCCC GGAAGTGG TTCTTCTCCC chr14:69658195-69658275 2 3.20e-05 C GGAAGTGG TTACGGCCCT chr20:5093701-5093781 56 5.20e-05 CAGGCGCGTC GGAAGTTG CGTCTCCGGA chr6:28220017-28220097 18 5.20e-05 GACATAGGAG GGAAGTTG AGGCTGGGGC chr19:51963856-51963936 67 5.20e-05 aagggaaggg ggaagttg gagcag chr9:34620543-34620623 21 6.42e-05 CCTTTATGCA GGAAGTGA CGCCATGATT chr20:2644836-2644916 21 6.42e-05 AAGTCGCGTG GGAAGTGA CGCCTGAAGC chr10:15902524-15902604 52 6.42e-05 TCCCCTCCCC GGAAGTGA AATTGGAGGC chr22:42078466-42078546 33 6.42e-05 TGCCGCCAGC GGAAGTGA CGTCCAGGGC chr3:184081054-184081134 22 7.19e-05 CTTTCGGGAC GGAAGTTA AGTAGCCCCG chr8:126575865-126575945 20 9.15e-05 ccctctgcat ggaaATAG AAGAGACAGG chr11:43902266-43902346 62 1.23e-04 AACGTCGAGA GGAAGTGC CTGATGCCGC chr3:128880067-128880147 29 1.23e-04 TGAGAGTACT GGAAGTGC CCGGACGAAG chr20:60962022-60962102 11 1.23e-04 TGCCGGAAGC GGAAGTGC GTCACGGCGA chr5:443210-443290 60 1.23e-04 TGCCGGAAGC GGAAGTGC CCGCGCGCTG chr10:64564242-64564322 2 1.23e-04 C GGAAGTGC GTCACTCCAC chr17:10600836-10600916 60 1.55e-04 TCCGGAAGTC GGAAGGAG TCGCTCTGTC chr20:44486046-44486126 24 1.55e-04 GCAGACCCCG GGAAGGAG GAATCTAGGT chr10:124713724-12471380 45 1.55e-04 GGTACAGCGT GGAAATGG GCAGGCAAAG chr19:9517708-9517788 2 1.55e-04 T GGAAGGAG GCGGGCCTGC chr10:103347975-10334805 16 1.55e-04 GACGAAGGGG GGAAGGAG GGCAAATGGC chr13:114103640-11410372 7 1.55e-04 TCACCC GGAAGGAG GGAGCCCTGT chr16:2771109-2771189 55 1.74e-04 GCGCCGCGGC GGAAGAGG CTCGGGGAGG chr5:87564638-87564718 51 2.30e-04 GCGCGGGACA GGAAGTTC CTCCCTTCTC chr14:23938867-23938947 36 2.30e-04 GTACGACACC GGAAGGGG TGGGCTTTGC chr3:15469042-15469122 12 2.30e-04 CTAGGAACCC GGAAGTTC CTACCCGACG chr22:29949731-29949811 18 2.30e-04 CCGGAAGTAA GGAAGGGG CGGCCGACCG chr3:13493354-13493434 55 2.30e-04 cggcaacacc ggaagttc ccgcccactt chr5:93954300-93954380 63 2.45e-04 GCGCGCGGCG GGAAATTG TTTCCCAGAG chrX:2548962-2549042 4 2.45e-04 TAG GGAAATTG TGACACTTTC chr9:125675587-125675667 11 2.45e-04 GACTTAGCCT GGAAGAAA ACACATCCGG chr8:124780643-124780723 63 2.45e-04 CCCGAAACTA GGAAGAAA CTTGGAGCTG chr16:77225000-77225080 56 2.89e-04 GGTCGTACCC GGAAGTGT GGCACCTCCC chr4:56719782-56719862 56 2.89e-04 CCCGGATATA GGAAGTGT TGGGGGAACG chr13:53191573-53191653 43 3.21e-04 GACCAGAAAC GGAAGAGA GCGCGGGGGA chr16:89307629-89307709 29 3.40e-04 acttccgggg ggaaggga ggagagcgag chr22:38453311-38453391 15 3.40e-04 CCGGGAGCCG GGAAGGGA AGGATTGTCT chr22:31556062-31556142 47 3.53e-04 CTTCAGCCAT GGAAATTA ACCTCTTCCG chr1:150039759-150039839 64 3.87e-04 CCGGCTGGGA GGAAGCAG CTGAGACCC chr20:19997930-19998010 1 3.87e-04 . GGAAGCAG TACCCCGTCT chr11:118122889-11812296 51 4.11e-04 CACTCACCCT GGAAGAAC AGGACGCCCA chr11:71823685-71823765 66 4.11e-04 CAGCCTGAGC GGAAGAAC CCACCAG chr1:40506357-40506437 67 4.80e-04 GGTTCTTGCC GGAAGCGG AGAGCG chr3:15419799-15419879 26 5.11e-04 ttgtcgtcat ggaaagag gcagtaactt chr22:27068764-27068844 71 5.11e-04 TTTGAAGGCC GGAAAGAG GG chrX:70208418-70208498 29 6.37e-04 ttattgctat ggaaaggg tggtaacttc chr17:19281194-19281274 18 6.37e-04 CAACTTGGCC GGAAGCTG CGGAGAGGCT chr1:151371948-151372028 18 6.37e-04 CATGGCTGCT GGAAGTCG TCTACAGGAA chr2:219536673-219536753 61 6.37e-04 ATGCCCTTAG GGAAGTCG GAGGCGGAAA chr19:56186460-56186540 50 6.80e-04 GCTTGGCTGC GGAAGCGA CTCCTGCCAG chr10:114206797-11420687 9 6.80e-04 CGAAGGGG GGAAAAAA CGCTTCTAAT chr14:69291632-69291712 3 7.35e-04 CT GGAAAATG CCATAGAGGT chrX:21857633-21857713 59 7.66e-04 TGTCCCCACT GGAAGAGT CCGGTGGGAA chr19:44716590-44716670 65 8.22e-04 GGGCCTTCTG GGAAGGGT AGTTCAGG chr22:26908427-26908507 7 8.46e-04 GAACCC GGAAGCAC CGTGGCCGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:135282194-135282274 1.2e-05 38_[+4]_34 chr14:35452075-35452155 1.2e-05 67_[+4]_5 chr16:56485254-56485334 1.2e-05 31_[+4]_41 chr5:133702876-133702956 3.2e-05 34_[+4]_38 chrX:7895726-7895806 3.2e-05 61_[+4]_11 chr14:69658195-69658275 3.2e-05 1_[+4]_71 chr20:5093701-5093781 5.2e-05 55_[+4]_17 chr6:28220017-28220097 5.2e-05 17_[+4]_55 chr19:51963856-51963936 5.2e-05 66_[+4]_6 chr9:34620543-34620623 6.4e-05 20_[+4]_52 chr20:2644836-2644916 6.4e-05 20_[+4]_52 chr10:15902524-15902604 6.4e-05 51_[+4]_21 chr22:42078466-42078546 6.4e-05 32_[+4]_40 chr3:184081054-184081134 7.2e-05 21_[+4]_51 chr8:126575865-126575945 9.1e-05 19_[+4]_53 chr11:43902266-43902346 0.00012 61_[+4]_11 chr3:128880067-128880147 0.00012 28_[+4]_44 chr20:60962022-60962102 0.00012 10_[+4]_62 chr5:443210-443290 0.00012 59_[+4]_13 chr10:64564242-64564322 0.00012 1_[+4]_71 chr17:10600836-10600916 0.00015 59_[+4]_13 chr20:44486046-44486126 0.00015 23_[+4]_49 chr10:124713724-12471380 0.00015 44_[+4]_28 chr19:9517708-9517788 0.00015 1_[+4]_71 chr10:103347975-10334805 0.00015 15_[+4]_57 chr13:114103640-11410372 0.00015 6_[+4]_66 chr16:2771109-2771189 0.00017 54_[+4]_18 chr5:87564638-87564718 0.00023 50_[+4]_22 chr14:23938867-23938947 0.00023 35_[+4]_37 chr3:15469042-15469122 0.00023 11_[+4]_61 chr22:29949731-29949811 0.00023 17_[+4]_55 chr3:13493354-13493434 0.00023 54_[+4]_18 chr5:93954300-93954380 0.00024 62_[+4]_10 chrX:2548962-2549042 0.00024 3_[+4]_69 chr9:125675587-125675667 0.00024 10_[+4]_62 chr8:124780643-124780723 0.00024 62_[+4]_10 chr16:77225000-77225080 0.00029 55_[+4]_17 chr4:56719782-56719862 0.00029 55_[+4]_17 chr13:53191573-53191653 0.00032 42_[+4]_30 chr16:89307629-89307709 0.00034 28_[+4]_44 chr22:38453311-38453391 0.00034 14_[+4]_58 chr22:31556062-31556142 0.00035 46_[+4]_26 chr1:150039759-150039839 0.00039 63_[+4]_9 chr20:19997930-19998010 0.00039 [+4]_72 chr11:118122889-11812296 0.00041 50_[+4]_22 chr11:71823685-71823765 0.00041 65_[+4]_7 chr1:40506357-40506437 0.00048 66_[+4]_6 chr3:15419799-15419879 0.00051 25_[+4]_47 chr22:27068764-27068844 0.00051 70_[+4]_2 chrX:70208418-70208498 0.00064 28_[+4]_44 chr17:19281194-19281274 0.00064 17_[+4]_55 chr1:151371948-151372028 0.00064 17_[+4]_55 chr2:219536673-219536753 0.00064 60_[+4]_12 chr19:56186460-56186540 0.00068 49_[+4]_23 chr10:114206797-11420687 0.00068 8_[+4]_64 chr14:69291632-69291712 0.00073 2_[+4]_70 chrX:21857633-21857713 0.00077 58_[+4]_14 chr19:44716590-44716670 0.00082 64_[+4]_8 chr22:26908427-26908507 0.00085 6_[+4]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGAAGTRG width=8 seqs=59 chr9:135282194-135282274 ( 39) GGAAGTAG 1 chr14:35452075-35452155 ( 68) GGAAGTAG 1 chr16:56485254-56485334 ( 32) GGAAGTAG 1 chr5:133702876-133702956 ( 35) GGAAGTGG 1 chrX:7895726-7895806 ( 62) GGAAGTGG 1 chr14:69658195-69658275 ( 2) GGAAGTGG 1 chr20:5093701-5093781 ( 56) GGAAGTTG 1 chr6:28220017-28220097 ( 18) GGAAGTTG 1 chr19:51963856-51963936 ( 67) GGAAGTTG 1 chr9:34620543-34620623 ( 21) GGAAGTGA 1 chr20:2644836-2644916 ( 21) GGAAGTGA 1 chr10:15902524-15902604 ( 52) GGAAGTGA 1 chr22:42078466-42078546 ( 33) GGAAGTGA 1 chr3:184081054-184081134 ( 22) GGAAGTTA 1 chr8:126575865-126575945 ( 20) GGAAATAG 1 chr11:43902266-43902346 ( 62) GGAAGTGC 1 chr3:128880067-128880147 ( 29) GGAAGTGC 1 chr20:60962022-60962102 ( 11) GGAAGTGC 1 chr5:443210-443290 ( 60) GGAAGTGC 1 chr10:64564242-64564322 ( 2) GGAAGTGC 1 chr17:10600836-10600916 ( 60) GGAAGGAG 1 chr20:44486046-44486126 ( 24) GGAAGGAG 1 chr10:124713724-12471380 ( 45) GGAAATGG 1 chr19:9517708-9517788 ( 2) GGAAGGAG 1 chr10:103347975-10334805 ( 16) GGAAGGAG 1 chr13:114103640-11410372 ( 7) GGAAGGAG 1 chr16:2771109-2771189 ( 55) GGAAGAGG 1 chr5:87564638-87564718 ( 51) GGAAGTTC 1 chr14:23938867-23938947 ( 36) GGAAGGGG 1 chr3:15469042-15469122 ( 12) GGAAGTTC 1 chr22:29949731-29949811 ( 18) GGAAGGGG 1 chr3:13493354-13493434 ( 55) GGAAGTTC 1 chr5:93954300-93954380 ( 63) GGAAATTG 1 chrX:2548962-2549042 ( 4) GGAAATTG 1 chr9:125675587-125675667 ( 11) GGAAGAAA 1 chr8:124780643-124780723 ( 63) GGAAGAAA 1 chr16:77225000-77225080 ( 56) GGAAGTGT 1 chr4:56719782-56719862 ( 56) GGAAGTGT 1 chr13:53191573-53191653 ( 43) GGAAGAGA 1 chr16:89307629-89307709 ( 29) GGAAGGGA 1 chr22:38453311-38453391 ( 15) GGAAGGGA 1 chr22:31556062-31556142 ( 47) GGAAATTA 1 chr1:150039759-150039839 ( 64) GGAAGCAG 1 chr20:19997930-19998010 ( 1) GGAAGCAG 1 chr11:118122889-11812296 ( 51) GGAAGAAC 1 chr11:71823685-71823765 ( 66) GGAAGAAC 1 chr1:40506357-40506437 ( 67) GGAAGCGG 1 chr3:15419799-15419879 ( 26) GGAAAGAG 1 chr22:27068764-27068844 ( 71) GGAAAGAG 1 chrX:70208418-70208498 ( 29) GGAAAGGG 1 chr17:19281194-19281274 ( 18) GGAAGCTG 1 chr1:151371948-151372028 ( 18) GGAAGTCG 1 chr2:219536673-219536753 ( 61) GGAAGTCG 1 chr19:56186460-56186540 ( 50) GGAAGCGA 1 chr10:114206797-11420687 ( 9) GGAAAAAA 1 chr14:69291632-69291712 ( 3) GGAAAATG 1 chrX:21857633-21857713 ( 59) GGAAGAGT 1 chr19:44716590-44716670 ( 65) GGAAGGGT 1 chr22:26908427-26908507 ( 7) GGAAGCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.17334 E= 8.6e+002 -1253 -1253 169 -1253 -1253 -1253 169 -1253 240 -1253 -1253 -1253 240 -1253 -1253 -1253 -16 -1253 143 -1253 -32 -159 -49 143 76 -317 51 6 21 -72 77 -152 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 59 E= 8.6e+002 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.169492 0.000000 0.830508 0.000000 0.152542 0.101695 0.220339 0.525424 0.322034 0.033898 0.440678 0.203390 0.220339 0.186441 0.525424 0.067797 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGAAGTRG MEME-4 regular expression -------------------------------------------------------------------------------- GGAAG[TG][GAT][GA] -------------------------------------------------------------------------------- Time 14.82 secs. ******************************************************************************** ******************************************************************************** MOTIF CCVCTTCC MEME-5 width = 8 sites = 74 llr = 505 E-value = 8.5e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 224::::: pos.-specific C 5628::aa probability G 213::::: matrix T 21:2aa:: bits 2.4 ** 2.2 ** 1.9 ** 1.7 **** Relative 1.4 **** Entropy 1.2 **** (9.8 bits) 1.0 ***** 0.7 ***** 0.5 ***** 0.2 ******* 0.0 -------- Multilevel CCACTTCC consensus GT sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:44101808-44101888 46 1.94e-05 GCGGCCTCAG CCACTTCC GCTTCCGGTC chr12:54582839-54582919 18 1.94e-05 GTACCCGCAG CCACTTCC GCCGGAAATG chr9:104296012-104296092 73 1.94e-05 TGGGTTGAAG CCACTTCC chr19:55663511-55663591 44 1.94e-05 ctttccccat ccacttcc tgtctccctc chr19:40477006-40477086 7 5.61e-05 TAAACT ACACTTCC CAGAAGCCTC chr2:230786085-230786165 45 5.61e-05 GCCCCTCGTC CCATTTCC GGGGAACCCT chr2:203103260-203103340 53 5.61e-05 ACGCCTCGCG TCACTTCC GCTTCGCGCA chr7:6617007-6617087 18 5.61e-05 CGGCCCTCGC ACACTTCC GCCGGAAGTC chr7:44084168-44084248 43 5.61e-05 CTGGCCCCTA CCATTTCC GCTTCCTGCC chrX:2548962-2549042 42 5.61e-05 TGACATTGCC ACACTTCC TGGTCCGTGT chrX:2548735-2548815 70 5.61e-05 GGATAGTGCC ACACTTCC TGG chr19:9938510-9938590 63 9.97e-05 ACTTTAACTT CCGCTTCC GGTTCCTAGC chr1:24117568-24117648 6 9.97e-05 GGTCC CCGCTTCC GGGTTCCGTA chr5:167913398-167913478 66 9.97e-05 CTGACCGTTT CCGCTTCC GTCCACT chr17:10600836-10600916 42 9.97e-05 CGGTAGCGTT CCGCTTCC TCCGGAAGTC chr19:4182535-4182615 45 9.97e-05 CTTGTTGAGG CCGCTTCC GCCGGAAGCG chr9:125693786-125693866 72 9.97e-05 CGGACAAAGA CAACTTCC A chr1:33116141-33116221 50 1.12e-04 CCCGGAGTTA CTACTTCC GCTCTAGACT chr4:153701076-153701156 19 1.12e-04 AGGGACAACG CTACTTCC GGTCTCCTCA chr12:56223375-56223455 37 1.12e-04 CGACCTGGGC CTACTTCC ACTTCCGGGG chr19:9879396-9879476 35 1.32e-04 GCGCCGGCTG GCACTTCC GCTTCCGGTT chr19:9517708-9517788 56 1.32e-04 TTCCGGGAGC GCACTTCC GTTTCCAGGC chr7:5553415-5553495 41 1.32e-04 CCGCCTACAC GCACTTCC GTTCGTCCGC chr1:155112980-155113060 2 1.63e-04 T CCCCTTCC CCGCGCGGCC chr19:51963856-51963936 20 1.63e-04 ttcccagaat ccccttcc ctgtttgctt chr12:16035273-16035353 18 1.78e-04 CCGCCAATCG TCATTTCC GGCGGGTGCT chr19:44439447-44439527 12 1.78e-04 CTCTGGAACT ACATTTCC CAGCATCCCC chr1:2187372-2187452 57 1.78e-04 TGTCCTGACC TCATTTCC TGTATGCAAC chr14:24658119-24658199 4 2.81e-04 AAT TCGCTTCC CACAAAGAGG chrX:70208418-70208498 8 2.81e-04 gaggcga taacttcc aggttattgc chr11:45939415-45939495 58 2.81e-04 CTTGGTTGCT TAACTTCC GCGGGCCAGA chr18:39534995-39535075 26 2.81e-04 ACCAGATTAG CCGTTTCC CGTATACATT chr1:160001759-160001839 14 2.81e-04 ATGGACGGTC TCGCTTCC GCTTCTTCTT chr3:178865834-178865914 42 2.81e-04 CGCCTCAATT TCGCTTCC GCTTCTTTGC chr22:46731538-46731618 18 3.23e-04 TAAGCTGCCG CAGCTTCC GGCCGGGCCA chr17:42264289-42264369 53 3.23e-04 CCTGGTATAA CAGCTTCC GGGAGAAGCC chr17:1227613-1227693 51 3.56e-04 CTCCTCCGCC CTGCTTCC GGGGTCATCG chr14:74353501-74353581 33 3.56e-04 CGCGCTCGAG CTGCTTCC GGCGGGAGCC chr2:43447117-43447197 23 4.59e-04 CGGCTCCCAC GAACTTCC AAGGCCGAGG chr14:75179779-75179859 6 4.59e-04 GATTG CCCTTTCC CCAAGGAGTT chr14:21852195-21852275 14 4.59e-04 CTCAAAGATG CCCTTTCC GCTTCCGGGT chr12:69864124-69864204 8 4.59e-04 TGCCAAA ACCCTTCC CTCCCCCGCT chr19:51728280-51728360 42 4.59e-04 TCCCCTCCAC TCCCTTCC TCTTTTCTGC chr12:6602503-6602583 5 4.59e-04 TACC ACCCTTCC CGCCTCAGTG chr1:203652033-203652113 53 4.91e-04 ACACGGAGTC CACCTTCC ACTCAGTTCC chr13:31191962-31192042 9 4.91e-04 CACGTCTT CACCTTCC CCGCCACGCC chr2:45838387-45838467 19 4.91e-04 AGTGCCACCG CACCTTCC GGTTCCCGCC chr10:105156297-10515637 17 6.15e-04 TCCAAATCCC GCCCTTCC GATTCCTGTC chr15:40331334-40331414 73 6.15e-04 TTCCGCTACT AGACTTCC chr11:31391339-31391419 37 6.15e-04 GTCGGAACAG TGACTTCC GGCGGAAGAA chr5:158690219-158690299 20 6.93e-04 CGTCCCCAAC ATATTTCC GTTTCAAACC chr10:103347975-10334805 39 6.93e-04 ATGGCCAGAA TAGCTTCC GAGTCAGCCG chr17:37844279-37844359 33 6.93e-04 TAGGAGTATG AAGCTTCC ACTTCCGGAG chr10:1102684-1102764 7 6.93e-04 GTGGGG CGGCTTCC GGAGAACCCA chr19:2950606-2950686 49 7.31e-04 TCACAGACGG ATGCTTCC GTTTCCGGTT chr10:102747246-10274732 52 7.31e-04 TCCCGGAGTT TTGCTTCC GAGGTCAAGG chrX:7895726-7895806 53 7.31e-04 CTCTTCGCGT CTGTTTCC CGGAAGTGGT chr7:6865932-6866012 73 7.31e-04 GCCTTGTTGT CTGTTTCC chr2:175260395-175260475 32 8.04e-04 AACCGGAACT GCGTTTCC AGCAGCAAGG chr16:89307629-89307709 47 8.04e-04 ggagagcgag ggaCTTCC gggggtaagg chr19:58258100-58258180 34 8.04e-04 CAAAATAAAG GCGTTTCC GCGGAAACAG chr9:140118113-140118193 42 8.04e-04 CCTGCGCAGT GGACTTCC GTCGCCGGCC chr3:88198988-88199068 42 8.04e-04 TGAGGGCACT GCGTTTCC TGATTGACCT chr16:3162483-3162563 73 8.04e-04 GATCTGGGAG GGACTTCC chr1:44435489-44435569 9 9.00e-04 AGGCTCCG CGCCTTCC TCGATGTACT chrX:49091951-49092031 14 9.00e-04 CACAGAACTA CACTTTCC AACTCTCCCC chr14:21458075-21458155 56 9.00e-04 ACAGGCACCT GTATTTCC GTTTCCGGTT chr8:143751384-143751464 38 9.00e-04 CGCGCCTCGT CGCCTTCC CCCAGCTACT chr9:35103133-35103213 29 9.94e-04 GCCTACCCGA GCCTTTCC TCTTGCAGTT chr19:52643135-52643215 25 9.94e-04 CAGCGATAAG GCCTTTCC CTGGCGCAAT chr4:41937115-41937195 12 1.11e-03 TTTGTCACCG CCTCTTCC CCACGGAAAT chr22:31556062-31556142 56 1.11e-03 TGGAAATTAA CCTCTTCC GGTTGGGGCC chr11:64037505-64037585 4 1.28e-03 CCA AGCCTTCC GTGGCTTCAC chr19:56186460-56186540 26 1.28e-03 CCGGAAGTGA TGCCTTCC AGGTTGGCTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:44101808-44101888 1.9e-05 45_[+5]_27 chr12:54582839-54582919 1.9e-05 17_[+5]_55 chr9:104296012-104296092 1.9e-05 72_[+5] chr19:55663511-55663591 1.9e-05 43_[+5]_29 chr19:40477006-40477086 5.6e-05 6_[+5]_66 chr2:230786085-230786165 5.6e-05 44_[+5]_28 chr2:203103260-203103340 5.6e-05 52_[+5]_20 chr7:6617007-6617087 5.6e-05 17_[+5]_55 chr7:44084168-44084248 5.6e-05 42_[+5]_30 chrX:2548962-2549042 5.6e-05 41_[+5]_31 chrX:2548735-2548815 5.6e-05 69_[+5]_3 chr19:9938510-9938590 0.0001 62_[+5]_10 chr1:24117568-24117648 0.0001 5_[+5]_67 chr5:167913398-167913478 0.0001 65_[+5]_7 chr17:10600836-10600916 0.0001 41_[+5]_31 chr19:4182535-4182615 0.0001 44_[+5]_28 chr9:125693786-125693866 0.0001 71_[+5]_1 chr1:33116141-33116221 0.00011 49_[+5]_23 chr4:153701076-153701156 0.00011 18_[+5]_54 chr12:56223375-56223455 0.00011 36_[+5]_36 chr19:9879396-9879476 0.00013 34_[+5]_38 chr19:9517708-9517788 0.00013 55_[+5]_17 chr7:5553415-5553495 0.00013 40_[+5]_32 chr1:155112980-155113060 0.00016 1_[+5]_71 chr19:51963856-51963936 0.00016 19_[+5]_53 chr12:16035273-16035353 0.00018 17_[+5]_55 chr19:44439447-44439527 0.00018 11_[+5]_61 chr1:2187372-2187452 0.00018 56_[+5]_16 chr14:24658119-24658199 0.00028 3_[+5]_69 chrX:70208418-70208498 0.00028 7_[+5]_65 chr11:45939415-45939495 0.00028 57_[+5]_15 chr18:39534995-39535075 0.00028 25_[+5]_47 chr1:160001759-160001839 0.00028 13_[+5]_59 chr3:178865834-178865914 0.00028 41_[+5]_31 chr22:46731538-46731618 0.00032 17_[+5]_55 chr17:42264289-42264369 0.00032 52_[+5]_20 chr17:1227613-1227693 0.00036 50_[+5]_22 chr14:74353501-74353581 0.00036 32_[+5]_40 chr2:43447117-43447197 0.00046 22_[+5]_50 chr14:75179779-75179859 0.00046 5_[+5]_67 chr14:21852195-21852275 0.00046 13_[+5]_59 chr12:69864124-69864204 0.00046 7_[+5]_65 chr19:51728280-51728360 0.00046 41_[+5]_31 chr12:6602503-6602583 0.00046 4_[+5]_68 chr1:203652033-203652113 0.00049 52_[+5]_20 chr13:31191962-31192042 0.00049 8_[+5]_64 chr2:45838387-45838467 0.00049 18_[+5]_54 chr10:105156297-10515637 0.00061 16_[+5]_56 chr15:40331334-40331414 0.00061 72_[+5] chr11:31391339-31391419 0.00061 36_[+5]_36 chr5:158690219-158690299 0.00069 19_[+5]_53 chr10:103347975-10334805 0.00069 38_[+5]_34 chr17:37844279-37844359 0.00069 32_[+5]_40 chr10:1102684-1102764 0.00069 6_[+5]_66 chr19:2950606-2950686 0.00073 48_[+5]_24 chr10:102747246-10274732 0.00073 51_[+5]_21 chrX:7895726-7895806 0.00073 52_[+5]_20 chr7:6865932-6866012 0.00073 72_[+5] chr2:175260395-175260475 0.0008 31_[+5]_41 chr16:89307629-89307709 0.0008 46_[+5]_26 chr19:58258100-58258180 0.0008 33_[+5]_39 chr9:140118113-140118193 0.0008 41_[+5]_31 chr3:88198988-88199068 0.0008 41_[+5]_31 chr16:3162483-3162563 0.0008 72_[+5] chr1:44435489-44435569 0.0009 8_[+5]_64 chrX:49091951-49092031 0.0009 13_[+5]_59 chr14:21458075-21458155 0.0009 55_[+5]_17 chr8:143751384-143751464 0.0009 37_[+5]_35 chr9:35103133-35103213 0.00099 28_[+5]_44 chr19:52643135-52643215 0.00099 24_[+5]_48 chr4:41937115-41937195 0.0011 11_[+5]_61 chr22:31556062-31556142 0.0011 55_[+5]_17 chr11:64037505-64037585 0.0013 3_[+5]_69 chr19:56186460-56186540 0.0013 25_[+5]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCVCTTCC width=8 seqs=74 chr10:44101808-44101888 ( 46) CCACTTCC 1 chr12:54582839-54582919 ( 18) CCACTTCC 1 chr9:104296012-104296092 ( 73) CCACTTCC 1 chr19:55663511-55663591 ( 44) CCACTTCC 1 chr19:40477006-40477086 ( 7) ACACTTCC 1 chr2:230786085-230786165 ( 45) CCATTTCC 1 chr2:203103260-203103340 ( 53) TCACTTCC 1 chr7:6617007-6617087 ( 18) ACACTTCC 1 chr7:44084168-44084248 ( 43) CCATTTCC 1 chrX:2548962-2549042 ( 42) ACACTTCC 1 chrX:2548735-2548815 ( 70) ACACTTCC 1 chr19:9938510-9938590 ( 63) CCGCTTCC 1 chr1:24117568-24117648 ( 6) CCGCTTCC 1 chr5:167913398-167913478 ( 66) CCGCTTCC 1 chr17:10600836-10600916 ( 42) CCGCTTCC 1 chr19:4182535-4182615 ( 45) CCGCTTCC 1 chr9:125693786-125693866 ( 72) CAACTTCC 1 chr1:33116141-33116221 ( 50) CTACTTCC 1 chr4:153701076-153701156 ( 19) CTACTTCC 1 chr12:56223375-56223455 ( 37) CTACTTCC 1 chr19:9879396-9879476 ( 35) GCACTTCC 1 chr19:9517708-9517788 ( 56) GCACTTCC 1 chr7:5553415-5553495 ( 41) GCACTTCC 1 chr1:155112980-155113060 ( 2) CCCCTTCC 1 chr19:51963856-51963936 ( 20) CCCCTTCC 1 chr12:16035273-16035353 ( 18) TCATTTCC 1 chr19:44439447-44439527 ( 12) ACATTTCC 1 chr1:2187372-2187452 ( 57) TCATTTCC 1 chr14:24658119-24658199 ( 4) TCGCTTCC 1 chrX:70208418-70208498 ( 8) TAACTTCC 1 chr11:45939415-45939495 ( 58) TAACTTCC 1 chr18:39534995-39535075 ( 26) CCGTTTCC 1 chr1:160001759-160001839 ( 14) TCGCTTCC 1 chr3:178865834-178865914 ( 42) TCGCTTCC 1 chr22:46731538-46731618 ( 18) CAGCTTCC 1 chr17:42264289-42264369 ( 53) CAGCTTCC 1 chr17:1227613-1227693 ( 51) CTGCTTCC 1 chr14:74353501-74353581 ( 33) CTGCTTCC 1 chr2:43447117-43447197 ( 23) GAACTTCC 1 chr14:75179779-75179859 ( 6) CCCTTTCC 1 chr14:21852195-21852275 ( 14) CCCTTTCC 1 chr12:69864124-69864204 ( 8) ACCCTTCC 1 chr19:51728280-51728360 ( 42) TCCCTTCC 1 chr12:6602503-6602583 ( 5) ACCCTTCC 1 chr1:203652033-203652113 ( 53) CACCTTCC 1 chr13:31191962-31192042 ( 9) CACCTTCC 1 chr2:45838387-45838467 ( 19) CACCTTCC 1 chr10:105156297-10515637 ( 17) GCCCTTCC 1 chr15:40331334-40331414 ( 73) AGACTTCC 1 chr11:31391339-31391419 ( 37) TGACTTCC 1 chr5:158690219-158690299 ( 20) ATATTTCC 1 chr10:103347975-10334805 ( 39) TAGCTTCC 1 chr17:37844279-37844359 ( 33) AAGCTTCC 1 chr10:1102684-1102764 ( 7) CGGCTTCC 1 chr19:2950606-2950686 ( 49) ATGCTTCC 1 chr10:102747246-10274732 ( 52) TTGCTTCC 1 chrX:7895726-7895806 ( 53) CTGTTTCC 1 chr7:6865932-6866012 ( 73) CTGTTTCC 1 chr2:175260395-175260475 ( 32) GCGTTTCC 1 chr16:89307629-89307709 ( 47) GGACTTCC 1 chr19:58258100-58258180 ( 34) GCGTTTCC 1 chr9:140118113-140118193 ( 42) GGACTTCC 1 chr3:88198988-88199068 ( 42) GCGTTTCC 1 chr16:3162483-3162563 ( 73) GGACTTCC 1 chr1:44435489-44435569 ( 9) CGCCTTCC 1 chrX:49091951-49092031 ( 14) CACTTTCC 1 chr14:21458075-21458155 ( 56) GTATTTCC 1 chr8:143751384-143751464 ( 38) CGCCTTCC 1 chr9:35103133-35103213 ( 29) GCCTTTCC 1 chr19:52643135-52643215 ( 25) GCCTTTCC 1 chr4:41937115-41937195 ( 12) CCTCTTCC 1 chr22:31556062-31556142 ( 56) CCTCTTCC 1 chr11:64037505-64037585 ( 4) AGCCTTCC 1 chr19:56186460-56186540 ( 26) TGCCTTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.10599 E= 8.5e+002 -23 63 -71 -15 -23 86 -119 -39 114 -33 1 -285 -1285 131 -1285 32 -1285 -1285 -1285 236 -1285 -1285 -1285 236 -1285 171 -1285 -1285 -1285 171 -1285 -1285 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 74 E= 8.5e+002 0.162162 0.472973 0.189189 0.175676 0.162162 0.554054 0.135135 0.148649 0.418919 0.243243 0.310811 0.027027 0.000000 0.756757 0.000000 0.243243 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCVCTTCC MEME-5 regular expression -------------------------------------------------------------------------------- CC[AGC][CT]TTCC -------------------------------------------------------------------------------- Time 17.86 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:118845921-118846001 5.64e-02 52_[+1(7.40e-05)]_20 chr7:6865932-6866012 6.39e-04 80 chr13:53191573-53191653 1.51e-02 80 chr20:2489747-2489827 9.20e-08 17_[+3(1.70e-06)]_45_[+1(7.40e-05)]_\ 2 chr7:5553415-5553495 3.14e-03 19_[+2(1.98e-05)]_53 chr3:132379078-132379158 1.39e-01 80 chr14:45604951-45605031 3.92e-03 6_[+3(6.18e-06)]_66 chr12:123459218-12345929 2.40e-03 [+1(1.94e-05)]_72 chr19:51963856-51963936 1.25e-04 66_[+4(5.20e-05)]_6 chr1:155112980-155113060 7.56e-05 32_[+1(1.94e-05)]_17_[+5(9.97e-05)]_\ 15 chr17:15587586-15587666 1.77e-02 80 chr13:114103640-11410372 2.18e-02 80 chr8:182397-182477 1.62e-01 80 chr22:31556062-31556142 2.10e-06 5_[+5(9.97e-05)]_58_[+1(1.94e-05)]_\ 1 chr7:100861285-100861365 3.74e-04 3_[+1(1.94e-05)]_69 chrX:19003062-19003142 1.68e-03 80 chr20:48532161-48532241 9.02e-02 80 chr8:126575865-126575945 1.18e-03 19_[+4(9.15e-05)]_6_[+1(4.35e-05)]_\ 39 chr11:31391339-31391419 4.24e-05 38_[+2(1.98e-05)]_34 chr10:1102684-1102764 5.98e-06 8_[+2(7.70e-05)]_29_[+2(1.98e-05)]_\ 5_[+1(1.94e-05)]_14 chr17:61904487-61904567 4.01e-01 80 chr8:141474803-141474883 1.12e-05 27_[+3(8.94e-06)]_9_[+1(1.94e-05)]_\ 28 chr1:40506357-40506437 2.58e-03 25_[+1(1.94e-05)]_31_[+1(7.40e-05)]_\ 8 chr17:18684497-18684577 7.14e-01 80 chr20:19997930-19998010 4.93e-04 50_[+2(1.98e-05)]_22 chr22:27068764-27068844 6.51e-03 29_[+1(4.35e-05)]_43 chr17:42264289-42264369 4.28e-05 32_[+2(3.22e-05)]_14_[+2(7.70e-05)]_\ 18 chr17:37844279-37844359 1.82e-07 38_[+5(1.94e-05)]_7_[+1(1.94e-05)]_\ 19 chr19:55663511-55663591 4.86e-03 4_[+2(3.22e-05)]_31_[+5(1.94e-05)]_\ 14_[+2(3.22e-05)]_7 chr12:105630032-10563011 2.55e-04 14_[+1(3.14e-05)]_58 chr5:68855970-68856050 1.31e-02 22_[+2(1.98e-05)]_50 chr10:114206797-11420687 9.61e-02 80 chr20:18548040-18548120 7.89e-03 24_[+1(1.94e-05)]_48 chr16:3162483-3162563 5.77e-02 80 chr9:35812266-35812346 2.39e-01 80 chr1:12142006-12142086 1.04e-02 5_[+2(3.22e-05)]_18_[+2(3.22e-05)]_\ 18_[+2(3.22e-05)]_15 chr19:52643135-52643215 3.92e-04 44_[+2(7.70e-05)]_28 chr13:41837674-41837754 6.55e-03 42_[+2(3.22e-05)]_30 chr8:143751384-143751464 2.65e-03 52_[+2(1.98e-05)]_20 chr7:72299839-72299919 2.58e-01 80 chr13:41345309-41345389 2.66e-02 41_[+2(7.70e-05)]_31 chr5:130506375-130506455 3.79e-05 16_[+1(1.94e-05)]_56 chr9:104296012-104296092 8.52e-03 25_[+5(5.61e-05)]_39_[+5(1.94e-05)] chr7:157129628-157129708 2.95e-05 28_[+4(5.20e-05)]_44 chr14:21458075-21458155 5.55e-02 80 chr16:81779939-81780019 1.23e-02 80 chr8:124780643-124780723 2.31e-06 18_[+4(6.42e-05)]_15_[+2(4.48e-05)]_\ 31 chr15:40331334-40331414 4.20e-05 33_[+1(1.94e-05)]_19_[+2(9.66e-05)]_\ 12 chr12:6602503-6602583 3.56e-05 21_[+2(7.70e-05)]_8_[+1(1.94e-05)]_\ 35 chr14:77924262-77924342 6.32e-01 80 chr15:40675093-40675173 3.35e-06 18_[+5(1.94e-05)]_9_[+1(1.94e-05)]_\ 37 chr2:45838387-45838467 7.67e-05 34_[+1(1.94e-05)]_38 chr3:13493354-13493434 1.03e-03 21_[+1(1.94e-05)]_23_[+1(1.94e-05)]_\ 20 chr1:2187372-2187452 3.96e-02 80 chr13:100150825-10015090 3.64e-04 43_[+4(1.22e-05)]_29 chr1:155990726-155990806 1.03e-03 17_[+1(3.14e-05)]_55 chrX:2548735-2548815 1.98e-03 14_[+2(3.22e-05)]_21_[+2(3.22e-05)]_\ 20_[+2(3.22e-05)]_1 chr22:38453311-38453391 8.59e-04 72_[+2(9.66e-05)] chr19:37263920-37264000 1.48e-03 71_[+2(7.70e-05)]_1 chr13:52768555-52768635 4.23e-02 80 chrX:49091951-49092031 1.56e-01 80 chr14:69658195-69658275 1.68e-02 1_[+4(3.20e-05)]_71 chr9:125675587-125675667 2.02e-04 80 chr16:639284-639364 1.49e-02 80 chr22:29949731-29949811 1.97e-03 7_[+1(1.94e-05)]_17_[+1(7.40e-05)]_\ 12_[+1(7.40e-05)]_20 chr12:56223375-56223455 3.82e-05 42_[+5(1.94e-05)]_30 chr14:35761569-35761649 1.35e-05 16_[+1(7.40e-05)]_10_[+2(1.98e-05)]_\ 38 chr12:54582839-54582919 1.63e-06 17_[+5(1.94e-05)]_1_[+1(3.14e-05)]_\ 46 chr13:29233202-29233282 3.04e-06 19_[+2(1.98e-05)]_27_[+4(6.42e-05)]_\ 18 chrX:2548962-2549042 1.89e-04 43_[+2(3.22e-05)]_18_[+2(3.22e-05)]_\ 3 chr20:44993017-44993097 7.82e-03 27_[+1(1.94e-05)]_45 chr6:32143871-32143951 5.16e-05 39_[+4(3.20e-05)]_33 chr16:56485254-56485334 1.01e-03 1_[+1(1.94e-05)]_22_[+4(1.22e-05)]_\ 41 chr9:129567239-129567319 6.13e-04 13_[+1(7.40e-05)]_59 chr8:144718067-144718147 1.64e-02 37_[+1(1.94e-05)]_35 chr19:51728280-51728360 9.78e-04 80 chr3:178865834-178865914 4.61e-02 65_[+2(7.70e-05)]_7 chr8:30601815-30601895 5.42e-01 80 chr19:16296087-16296167 8.86e-04 17_[+1(1.94e-05)]_55 chr22:42078466-42078546 1.25e-03 6_[+1(4.35e-05)]_18_[+4(6.42e-05)]_\ 40 chr19:44716590-44716670 2.47e-02 80 chr12:6798728-6798808 9.77e-05 19_[+2(1.98e-05)]_53 chr5:93954300-93954380 1.74e-05 18_[+1(3.14e-05)]_9_[+2(7.70e-05)]_\ 37 chr1:762791-762871 5.72e-01 80 chr1:2187572-2187652 3.98e-02 80 chr3:15469042-15469122 1.41e-03 9_[+1(1.94e-05)]_12_[+1(1.94e-05)]_\ 43 chr14:23938867-23938947 1.14e-02 19_[+1(4.35e-05)]_53 chr2:201753967-201754047 1.10e-04 48_[+5(1.94e-05)]_24 chr10:103347975-10334805 2.05e-05 53_[+1(1.94e-05)]_19 chr1:7887444-7887524 8.90e-02 80 chr3:121468765-121468845 1.53e-02 64_[+1(4.35e-05)]_8 chr3:129118397-129118477 8.46e-02 80 chr7:44084168-44084248 1.14e-02 42_[+5(5.61e-05)]_30 chr10:64564242-64564322 4.14e-03 80 chr8:146052887-146052967 5.23e-05 14_[+1(1.94e-05)]_58 chr3:52321933-52322013 8.62e-01 80 chr11:71823685-71823765 7.29e-03 39_[+1(7.40e-05)]_33 chr12:69864124-69864204 2.96e-04 28_[+1(1.94e-05)]_44 chr22:46731538-46731618 4.34e-03 19_[+2(7.70e-05)]_36_[+2(1.98e-05)]_\ 9 chr19:50379508-50379588 3.51e-02 20_[+1(1.94e-05)]_52 chr12:38710452-38710532 1.68e-02 80 chr3:88198988-88199068 3.67e-03 70_[+2(9.66e-05)]_2 chr10:105156297-10515637 6.24e-05 61_[+4(1.22e-05)]_11 chr9:130700138-130700218 1.84e-02 80 chr19:9517708-9517788 1.06e-04 35_[+5(5.61e-05)]_37 chr19:44439447-44439527 9.43e-04 62_[+1(9.36e-05)]_10 chr10:27443303-27443383 1.26e-04 46_[+2(1.98e-05)]_26 chr9:35103133-35103213 1.00e-03 62_[+2(1.98e-05)]_10 chr1:160001759-160001839 1.23e-02 45_[+2(4.48e-05)]_27 chr13:31191962-31192042 5.74e-03 80 chrX:7895726-7895806 5.94e-05 26_[+1(1.94e-05)]_25_[+1(1.94e-05)]_\ 13 chr17:61627722-61627802 1.04e-02 80 chr11:64085036-64085116 3.07e-07 20_[+2(1.98e-05)]_37_[+1(1.94e-05)]_\ 7 chr4:41937115-41937195 1.10e-05 38_[+2(1.98e-05)]_34 chr22:29784519-29784599 1.25e-05 29_[+4(6.42e-05)]_17_[+2(1.98e-05)]_\ 18 chr15:74988334-74988414 1.71e-05 15_[+1(7.40e-05)]_33_[+2(1.98e-05)]_\ 16 chr7:39663128-39663208 2.60e-03 29_[+1(1.94e-05)]_43 chr10:102747246-10274732 2.17e-02 18_[+2(7.70e-05)]_54 chr11:118122889-11812296 1.15e-03 13_[+1(1.94e-05)]_59 chr11:6502605-6502685 9.77e-01 80 chr14:21852195-21852275 1.04e-02 21_[+2(7.70e-05)]_51 chr2:128051691-128051771 1.26e-04 35_[+2(1.98e-05)]_6_[+1(7.40e-05)]_\ 23 chr14:69291632-69291712 5.22e-01 80 chr2:133104978-133105058 4.49e-03 9_[+2(9.66e-05)]_63 chr13:46038930-46039010 3.78e-03 31_[+1(3.14e-05)]_41 chr16:31085650-31085730 1.07e-02 41_[+1(9.36e-05)]_31 chr12:498490-498570 4.66e-03 80 chr3:130465643-130465723 2.32e-07 30_[+2(3.22e-05)]_9_[+4(6.42e-05)]_\ 25 chr19:49955122-49955202 7.16e-02 72_[+3(3.44e-06)] chr19:56186460-56186540 2.00e-04 15_[+1(1.94e-05)]_57 chr15:64648366-64648446 6.60e-01 80 chr1:203652033-203652113 2.34e-01 80 chr14:75469590-75469670 4.40e-04 31_[+1(1.94e-05)]_41 chr6:28220017-28220097 1.64e-07 17_[+4(5.20e-05)]_11_[+1(4.35e-05)]_\ 17_[+5(1.94e-05)]_11 chr8:144287490-144287570 4.23e-03 38_[+1(4.35e-05)]_34 chr12:48551236-48551316 2.66e-02 54_[+1(7.40e-05)]_18 chr3:179065413-179065493 2.15e-07 19_[+2(7.70e-05)]_34_[+1(1.94e-05)]_\ 11 chr3:184081054-184081134 3.14e-03 21_[+4(7.19e-05)]_26_[+4(3.20e-05)]_\ 17 chr14:24912105-24912185 3.28e-02 80 chr1:169337255-169337335 1.36e-01 80 chr7:6617007-6617087 1.86e-05 17_[+5(5.61e-05)]_1_[+1(1.94e-05)]_\ 38_[+1(4.35e-05)] chr14:75179779-75179859 1.95e-05 26_[+2(7.70e-05)]_11_[+1(7.40e-05)]_\ 27 chr19:8617814-8617894 2.10e-03 53_[+1(4.35e-05)]_19 chr10:15001879-15001959 2.91e-02 80 chr1:150039759-150039839 5.48e-03 39_[+1(7.40e-05)]_33 chr2:203103260-203103340 1.79e-03 33_[+2(9.66e-05)]_11_[+5(5.61e-05)]_\ 20 chr9:125693786-125693866 2.24e-03 71_[+5(9.97e-05)]_1 chr10:15902524-15902604 8.06e-04 34_[+1(1.94e-05)]_7_[+1(1.94e-05)]_\ 23 chr3:101280629-101280709 1.27e-05 53_[+2(1.98e-05)]_19 chr18:39534995-39535075 4.35e-02 80 chr10:124713724-12471380 6.35e-05 64_[+2(1.98e-05)]_8 chr2:27994572-27994652 4.41e-02 5_[+1(7.40e-05)]_67 chr4:120221732-120221812 9.91e-03 80 chr2:230786085-230786165 8.70e-03 26_[+2(4.48e-05)]_12_[+2(4.48e-05)]_\ 26 chr19:11039367-11039447 2.97e-05 27_[+5(1.94e-05)]_45 chr5:158690219-158690299 3.22e-03 39_[+5(1.94e-05)]_33 chr9:140118113-140118193 3.22e-03 21_[+2(1.98e-05)]_51 chr19:58258100-58258180 8.31e-07 24_[+3(3.44e-06)]_31_[+2(1.98e-05)]_\ 9 chr19:4182535-4182615 5.90e-06 44_[+5(9.97e-05)]_1_[+1(7.40e-05)]_\ 19 chr20:44486046-44486126 5.34e-03 [+1(1.94e-05)]_72 chr22:50683460-50683540 2.84e-02 14_[+1(3.14e-05)]_58 chr4:113152672-113152752 4.07e-03 20_[+3(6.18e-06)]_52 chr22:38082354-38082434 3.81e-03 2_[+1(1.94e-05)]_70 chr16:2771109-2771189 1.32e-02 70_[+4(7.19e-05)]_2 chr20:55685493-55685573 1.31e-01 80 chr3:119217252-119217332 6.27e-06 18_[+2(1.98e-05)]_39_[+1(1.94e-05)]_\ 7 chr2:219536673-219536753 2.65e-02 44_[+1(3.14e-05)]_28 chr16:84220628-84220708 1.03e-04 33_[+1(1.94e-05)]_14_[+1(4.35e-05)]_\ 17 chr4:153701076-153701156 1.96e-03 20_[+2(1.98e-05)]_7_[+2(1.98e-05)]_\ 37 chr11:64037505-64037585 1.31e-03 80 chr4:56719782-56719862 4.90e-05 19_[+2(1.98e-05)]_53 chr12:16035273-16035353 4.62e-03 19_[+2(4.48e-05)]_27_[+2(3.22e-05)]_\ 18 chrX:119077720-119077800 2.48e-03 49_[+3(2.68e-05)]_23 chr5:87564638-87564718 2.46e-05 25_[+1(1.94e-05)]_15_[+1(4.35e-05)]_\ 24 chr5:271489-271569 6.00e-04 22_[+2(3.22e-05)]_50 chr1:151371948-151372028 6.62e-06 59_[+5(5.61e-05)]_13 chr3:48481560-48481640 5.31e-03 37_[+2(3.22e-05)]_35 chr5:80597366-80597446 1.62e-05 16_[+1(1.94e-05)]_22_[+2(7.70e-05)]_\ 26 chr10:71930245-71930325 1.43e-03 43_[+2(1.98e-05)]_29 chr2:174830142-174830222 9.44e-02 80 chr19:9879396-9879476 8.63e-03 42_[+2(7.70e-05)]_30 chr3:15419799-15419879 3.90e-04 39_[+2(1.98e-05)]_33 chr17:63119396-63119476 5.28e-02 54_[+3(3.80e-05)]_18 chr17:19281194-19281274 3.01e-02 15_[+1(7.40e-05)]_18_[+1(1.94e-05)]_\ 31 chrX:108780037-108780117 2.10e-04 45_[+2(1.98e-05)]_27 chr17:10600836-10600916 4.20e-06 26_[+2(4.48e-05)]_7_[+5(9.97e-05)]_\ 1_[+1(1.94e-05)]_22 chr9:138853306-138853386 5.26e-02 80 chr12:9102548-9102628 8.93e-03 47_[+4(7.19e-05)]_25 chr22:26908427-26908507 3.93e-03 4_[+1(7.40e-05)]_15_[+1(3.14e-05)]_\ 45 chr19:7069614-7069694 6.17e-02 43_[+1(7.40e-05)]_29 chr19:14800768-14800848 7.19e-03 60_[+5(1.94e-05)]_12 chr5:443210-443290 9.65e-05 35_[+2(7.70e-05)]_8_[+1(7.40e-05)]_\ 21 chr16:3156489-3156569 4.15e-03 50_[+1(1.94e-05)]_22 chr20:40322129-40322209 9.73e-01 80 chrX:153775788-153775868 4.34e-05 19_[+2(1.98e-05)]_17_[+1(7.40e-05)]_\ 28 chr11:62495861-62495941 4.31e-02 80 chr20:2644836-2644916 6.57e-07 6_[+1(4.35e-05)]_6_[+4(6.42e-05)]_\ 30_[+2(1.98e-05)]_14 chr14:35452075-35452155 3.91e-04 59_[+1(7.40e-05)]_[+4(1.22e-05)]_5 chr7:102988049-102988129 1.42e-05 16_[+2(1.98e-05)]_25_[+1(7.40e-05)]_\ 23 chr14:74353501-74353581 1.57e-04 11_[+2(3.22e-05)]_15_[+2(7.70e-05)]_\ 38 chr9:34620543-34620623 1.21e-03 18_[+1(4.35e-05)]_25_[+1(1.94e-05)]_\ 21 chr16:1823145-1823225 9.19e-03 2_[+1(1.94e-05)]_44_[+1(7.40e-05)]_\ 18 chr10:44101808-44101888 7.83e-03 45_[+5(1.94e-05)]_[+2(7.70e-05)]_19 chr2:43447117-43447197 9.01e-04 56_[+2(1.98e-05)]_16 chr16:89307629-89307709 5.25e-04 18_[+2(1.98e-05)]_22_[+2(1.98e-05)]_\ 24 chr19:58071217-58071297 1.04e-03 3_[+1(1.94e-05)]_69 chr5:133702876-133702956 1.14e-02 34_[+4(3.20e-05)]_38 chr11:57479845-57479925 7.62e-02 80 chr18:72265007-72265087 6.71e-03 51_[+1(1.94e-05)]_21 chr2:201936617-201936697 1.57e-01 80 chr17:1227613-1227693 6.01e-02 1_[+2(7.70e-05)]_14_[+2(7.70e-05)]_\ 21_[+2(7.70e-05)]_20 chr20:60962022-60962102 2.84e-02 2_[+1(7.40e-05)]_70 chr5:167913398-167913478 2.19e-03 41_[+2(7.70e-05)]_16_[+5(9.97e-05)]_\ 7 chr22:40742476-40742556 5.55e-02 33_[+5(9.97e-05)]_39 chr4:148538531-148538611 4.23e-01 80 chr2:175260395-175260475 4.86e-05 2_[+3(3.80e-05)]_70 chr7:44240489-44240569 2.39e-02 19_[+2(1.98e-05)]_53 chr16:27280120-27280200 1.21e-02 46_[+2(1.98e-05)]_26 chr1:55230339-55230419 2.47e-04 66_[+1(1.94e-05)]_6 chr14:100842662-10084274 8.08e-04 19_[+2(1.98e-05)]_53 chr1:11862812-11862892 1.48e-01 80 chr5:102455837-102455917 6.87e-01 80 chrX:21857633-21857713 4.45e-06 1_[+3(1.70e-05)]_11_[+2(4.48e-05)]_\ 52 chr16:30087238-30087318 3.62e-03 80 chr1:24117568-24117648 1.47e-03 7_[+2(7.70e-05)]_22_[+2(1.98e-05)]_\ 35 chr11:45939415-45939495 1.16e-02 25_[+2(7.70e-05)]_26_[+2(9.66e-05)]_\ 13 chrX:70208418-70208498 5.15e-04 41_[+2(1.98e-05)]_31 chr14:24658119-24658199 1.28e-04 31_[+5(1.94e-05)]_41 chr2:70121031-70121111 2.94e-05 42_[+1(1.94e-05)]_30 chr16:1832793-1832873 7.98e-02 80 chr19:12780341-12780421 3.44e-03 80 chr9:135282194-135282274 1.26e-05 13_[+1(1.94e-05)]_17_[+4(1.22e-05)]_\ 34 chr19:2950606-2950686 1.88e-02 80 chr2:71357677-71357757 6.65e-03 80 chr8:146176217-146176297 1.45e-03 36_[+1(1.94e-05)]_36 chr16:2892704-2892784 2.67e-03 34_[+2(1.98e-05)]_25_[+2(3.22e-05)]_\ 5 chr19:9938510-9938590 9.64e-03 38_[+2(7.70e-05)]_18_[+2(7.70e-05)]_\ 8 chr3:128880067-128880147 2.95e-03 7_[+1(4.35e-05)]_65 chr16:77225000-77225080 7.76e-04 24_[+1(1.94e-05)]_21_[+1(1.94e-05)]_\ 19 chr1:32110618-32110698 1.70e-04 53_[+1(1.94e-05)]_19 chr19:6393178-6393258 1.98e-02 38_[+1(7.40e-05)]_34 chr3:100119995-100120075 4.23e-05 34_[+2(1.98e-05)]_38 chr5:74062971-74063051 6.58e-06 13_[+5(9.97e-05)]_20_[+3(2.15e-05)]_\ 31 chr1:44435489-44435569 2.10e-02 23_[+2(1.98e-05)]_49 chr19:40477006-40477086 3.12e-05 6_[+5(5.61e-05)]_66 chr2:39005280-39005360 1.38e-04 11_[+3(2.15e-05)]_14_[+4(6.42e-05)]_\ 39 chr11:43902266-43902346 1.40e-03 29_[+4(1.22e-05)]_43 chr20:5093701-5093781 9.95e-04 24_[+1(1.94e-05)]_23_[+4(5.20e-05)]_\ 5_[+1(7.40e-05)]_4 chr3:49893966-49894046 1.83e-07 27_[+2(3.22e-05)]_7_[+1(1.94e-05)]_\ 30 chr1:33116141-33116221 2.24e-02 10_[+2(9.66e-05)]_33_[+2(9.66e-05)]_\ 21 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************