******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/GABPA.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr12:105629990-10563007 1.0000 80 chr20:44993021-44993101 1.0000 80 chr9:130548251-130548331 1.0000 80 chr16:22019347-22019427 1.0000 80 chr17:80009738-80009818 1.0000 80 chr1:19811988-19812068 1.0000 80 chr19:14800803-14800883 1.0000 80 chr16:24740918-24740998 1.0000 80 chr16:2771127-2771207 1.0000 80 chr6:28186702-28186782 1.0000 80 chr13:41837687-41837767 1.0000 80 chr16:30538124-30538204 1.0000 80 chr1:38273830-38273910 1.0000 80 chr9:35732236-35732316 1.0000 80 chr8:144718104-144718184 1.0000 80 chr1:1209207-1209287 1.0000 80 chr8:146052890-146052970 1.0000 80 chr9:140149718-140149798 1.0000 80 chr8:145582177-145582257 1.0000 80 chr17:37844296-37844376 1.0000 80 chr22:35887942-35888022 1.0000 80 chr8:143751361-143751441 1.0000 80 chr9:138853271-138853351 1.0000 80 chr10:1102645-1102725 1.0000 80 chr10:26986498-26986578 1.0000 80 chr7:39663101-39663181 1.0000 80 chr17:38975325-38975405 1.0000 80 chr8:144816215-144816295 1.0000 80 chr20:2489762-2489842 1.0000 80 chr12:69864109-69864189 1.0000 80 chr4:1723005-1723085 1.0000 80 chr8:141474813-141474893 1.0000 80 chr16:639289-639369 1.0000 80 chr9:129622844-129622924 1.0000 80 chr8:145980972-145981052 1.0000 80 chr20:19997917-19997997 1.0000 80 chr14:23938859-23938939 1.0000 80 chr8:144349537-144349617 1.0000 80 chr9:136223318-136223398 1.0000 80 chr3:47844553-47844633 1.0000 80 chr5:93954291-93954371 1.0000 80 chr19:36236289-36236369 1.0000 80 chr17:42264290-42264370 1.0000 80 chr19:44439428-44439508 1.0000 80 chr16:89160227-89160307 1.0000 80 chr16:3156498-3156578 1.0000 80 chr17:61904501-61904581 1.0000 80 chr12:54582794-54582874 1.0000 80 chr3:48956224-48956304 1.0000 80 chr14:21458083-21458163 1.0000 80 chr17:19281210-19281290 1.0000 80 chr7:5553423-5553503 1.0000 80 chr20:48532100-48532180 1.0000 80 chr16:89787327-89787407 1.0000 80 chr19:56116922-56117002 1.0000 80 chr7:157129630-157129710 1.0000 80 chr1:156698304-156698384 1.0000 80 chrX:19003064-19003144 1.0000 80 chr19:11616608-11616688 1.0000 80 chr2:118845916-118845996 1.0000 80 chr18:39535000-39535080 1.0000 80 chr13:41345311-41345391 1.0000 80 chr2:27294523-27294603 1.0000 80 chr3:15469034-15469114 1.0000 80 chr5:130506374-130506454 1.0000 80 chr22:43010916-43010996 1.0000 80 chr1:40506323-40506403 1.0000 80 chr1:155112979-155113059 1.0000 80 chr20:1373816-1373896 1.0000 80 chr1:3663892-3663972 1.0000 80 chr17:7218669-7218749 1.0000 80 chr16:1823141-1823221 1.0000 80 chr9:104296023-104296103 1.0000 80 chr9:35812269-35812349 1.0000 80 chr22:40742460-40742540 1.0000 80 chr12:123459240-12345932 1.0000 80 chr16:3162500-3162580 1.0000 80 chr16:56485244-56485324 1.0000 80 chr6:32143865-32143945 1.0000 80 chr9:128469445-128469525 1.0000 80 chr11:910781-910861 1.0000 80 chr7:44084174-44084254 1.0000 80 chr11:71823691-71823771 1.0000 80 chr11:1968514-1968594 1.0000 80 chr5:892893-892973 1.0000 80 chr3:52740064-52740144 1.0000 80 chr22:50639386-50639466 1.0000 80 chr7:6676886-6676966 1.0000 80 chr13:29233200-29233280 1.0000 80 chr17:1945280-1945360 1.0000 80 chr7:100861256-100861336 1.0000 80 chr11:31391341-31391421 1.0000 80 chr9:134406625-134406705 1.0000 80 chr15:64648389-64648469 1.0000 80 chr12:6602506-6602586 1.0000 80 chrX:153775775-153775855 1.0000 80 chr16:12070464-12070544 1.0000 80 chr22:43485418-43485498 1.0000 80 chr6:41040220-41040300 1.0000 80 chr14:21852191-21852271 1.0000 80 chr9:129567254-129567334 1.0000 80 chr17:79849461-79849541 1.0000 80 chr9:130700122-130700202 1.0000 80 chr5:180288244-180288324 1.0000 80 chr10:102747245-10274732 1.0000 80 chr16:81779934-81780014 1.0000 80 chr5:443219-443299 1.0000 80 chr8:144373486-144373566 1.0000 80 chr8:144329064-144329144 1.0000 80 chr2:201753979-201754059 1.0000 80 chr12:123465169-12346524 1.0000 80 chr12:48551251-48551331 1.0000 80 chr19:4182529-4182609 1.0000 80 chr1:173837448-173837528 1.0000 80 chr22:29949723-29949803 1.0000 80 chr1:36023012-36023092 1.0000 80 chr15:40331335-40331415 1.0000 80 chr2:175260406-175260486 1.0000 80 chr4:41937118-41937198 1.0000 80 chr9:133454927-133455007 1.0000 80 chr19:44716613-44716693 1.0000 80 chr12:133287315-13328739 1.0000 80 chr9:140317621-140317701 1.0000 80 chr22:27068777-27068857 1.0000 80 chr11:64085043-64085123 1.0000 80 chr11:62495868-62495948 1.0000 80 chr22:46731540-46731620 1.0000 80 chr9:125693792-125693872 1.0000 80 chr3:88199008-88199088 1.0000 80 chr3:50264982-50265062 1.0000 80 chr19:6393184-6393264 1.0000 80 chr20:60962054-60962134 1.0000 80 chr4:113152669-113152749 1.0000 80 chr2:241075694-241075774 1.0000 80 chr11:123612341-12361242 1.0000 80 chr1:150039760-150039840 1.0000 80 chr14:35452073-35452153 1.0000 80 chr12:498740-498820 1.0000 80 chr16:77225006-77225086 1.0000 80 chr22:46431913-46431993 1.0000 80 chr3:178865854-178865934 1.0000 80 chr16:84220632-84220712 1.0000 80 chr11:6502583-6502663 1.0000 80 chr12:53574417-53574497 1.0000 80 chr13:114103635-11410371 1.0000 80 chr4:153701057-153701137 1.0000 80 chr14:35761567-35761647 1.0000 80 chr3:49158239-49158319 1.0000 80 chr12:112037311-11203739 1.0000 80 chr5:180237177-180237257 1.0000 80 chr16:2059862-2059942 1.0000 80 chr5:1345160-1345240 1.0000 80 chr9:140118123-140118203 1.0000 80 chr16:69166446-69166526 1.0000 80 chr2:233415318-233415398 1.0000 80 chr19:2950594-2950674 1.0000 80 chr11:45939414-45939494 1.0000 80 chr19:11039388-11039468 1.0000 80 chr19:45542290-45542370 1.0000 80 chr10:35625331-35625411 1.0000 80 chr8:42396703-42396783 1.0000 80 chr11:57479826-57479906 1.0000 80 chr8:117778694-117778774 1.0000 80 chr10:124713716-12471379 1.0000 80 chr3:49203758-49203838 1.0000 80 chr15:101874650-10187473 1.0000 80 chr20:524445-524525 1.0000 80 chr12:9102550-9102630 1.0000 80 chr5:158690235-158690315 1.0000 80 chr16:771122-771202 1.0000 80 chr20:2644825-2644905 1.0000 80 chr7:102988040-102988120 1.0000 80 chr19:56110876-56110956 1.0000 80 chr1:169337259-169337339 1.0000 80 chr2:54014107-54014187 1.0000 80 chr15:40675088-40675168 1.0000 80 chr8:22526622-22526702 1.0000 80 chr8:124780654-124780734 1.0000 80 chr14:75348568-75348648 1.0000 80 chr2:27994561-27994641 1.0000 80 chr19:6280003-6280083 1.0000 80 chr7:1543998-1544078 1.0000 80 chr2:71357676-71357756 1.0000 80 chr13:31191943-31192023 1.0000 80 chr11:35684280-35684360 1.0000 80 chr10:27443312-27443392 1.0000 80 chr13:46038949-46039029 1.0000 80 chr15:59981476-59981556 1.0000 80 chr22:31556073-31556153 1.0000 80 chr13:115000285-11500036 1.0000 80 chr19:46296040-46296120 1.0000 80 chr19:4457800-4457880 1.0000 80 chr10:64564240-64564320 1.0000 80 chr11:64008361-64008441 1.0000 80 chr9:35749192-35749272 1.0000 80 chr16:31128949-31129029 1.0000 80 chr19:56092279-56092359 1.0000 80 chr20:5093713-5093793 1.0000 80 chr19:8942983-8943063 1.0000 80 chr19:40791281-40791361 1.0000 80 chr5:114598550-114598630 1.0000 80 chr1:213224544-213224624 1.0000 80 chr20:18548009-18548089 1.0000 80 chr16:67226016-67226096 1.0000 80 chr14:75179777-75179857 1.0000 80 chr17:61627737-61627817 1.0000 80 chr9:139294606-139294686 1.0000 80 chr19:9879384-9879464 1.0000 80 chr16:19729523-19729603 1.0000 80 chr16:2587874-2587954 1.0000 80 chr16:89307673-89307753 1.0000 80 chr16:718045-718125 1.0000 80 chr20:34287247-34287327 1.0000 80 chr2:174830143-174830223 1.0000 80 chr19:16296113-16296193 1.0000 80 chr17:10600846-10600926 1.0000 80 chr16:31085542-31085622 1.0000 80 chr18:33552562-33552642 1.0000 80 chr16:75600208-75600288 1.0000 80 chr14:75593731-75593811 1.0000 80 chr17:76374677-76374757 1.0000 80 chr6:33257261-33257341 1.0000 80 chr3:108308314-108308394 1.0000 80 chr10:15902517-15902597 1.0000 80 chrX:150565620-150565700 1.0000 80 chr3:13493338-13493418 1.0000 80 chr22:41215339-41215419 1.0000 80 chr16:619905-619985 1.0000 80 chr2:85839181-85839261 1.0000 80 chr18:22006536-22006616 1.0000 80 chr14:69658187-69658267 1.0000 80 chr21:45432157-45432237 1.0000 80 chr17:56595591-56595671 1.0000 80 chr20:18268856-18268936 1.0000 80 chr10:135122352-13512243 1.0000 80 chr1:38325243-38325323 1.0000 80 chr19:47759716-47759796 1.0000 80 chr19:8070622-8070702 1.0000 80 chr16:89284020-89284100 1.0000 80 chr1:155178980-155179060 1.0000 80 chr10:71930241-71930321 1.0000 80 chr7:91875219-91875299 1.0000 80 chr8:126575859-126575939 1.0000 80 chr5:74062967-74063047 1.0000 80 chr14:45604948-45605028 1.0000 80 chr3:125314419-125314499 1.0000 80 chr12:56320872-56320952 1.0000 80 chr19:1885469-1885549 1.0000 80 chr11:117014945-11701502 1.0000 80 chr19:9938501-9938581 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_GABPA/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/GABPA.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.164 C 0.334 G 0.343 T 0.159 Background letter frequencies (from file dataset with add-one prior applied): A 0.164 C 0.334 G 0.343 T 0.159 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCGGAAGT MEME-1 width = 8 sites = 173 llr = 1422 E-value = 8.9e-205 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A 11::aa11 pos.-specific C 89:::::3 probability G 1:aa::91 matrix T :::::::6 bits 2.6 ** 2.4 ** 2.1 ** 1.9 ** Relative 1.6 **** Entropy 1.3 **** (11.9 bits) 1.1 ****** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CCGGAAGT consensus C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:117014945-11701502 50 1.93e-05 GGCAGGGGAA CCGGAAGT GGAGGAGCTG chr19:1885469-1885549 42 1.93e-05 CACCACCGCC CCGGAAGT GACGCGAGGA chr19:47759716-47759796 22 1.93e-05 TCCCACAGGA CCGGAAGT GACCCTCTTT chr21:45432157-45432237 43 1.93e-05 GGCGCCGAGG CCGGAAGT GGCTGAGGCC chr3:13493338-13493418 38 1.93e-05 gtggcaacac ccggaagt tactgcccct chr10:15902517-15902597 42 1.93e-05 GGCTGAGGGC CCGGAAGT CCCCTCCCCG chr3:108308314-108308394 38 1.93e-05 CGGTCGGGCT CCGGAAGT CCCTAGGCAC chr16:75600208-75600288 47 1.93e-05 GCTCCGACAG CCGGAAGT CCCGCCTGCC chr16:31085542-31085622 6 1.93e-05 TCTTG CCGGAAGT GTGGCTAGCT chr17:10600846-10600926 41 1.93e-05 TCCGCTTCCT CCGGAAGT CGGAAGGAGT chr20:34287247-34287327 20 1.93e-05 CCCCAGGCTC CCGGAAGT GCTGCCCGGC chr16:718045-718125 28 1.93e-05 gcgggcgggg ccggaagt gtggggacag chr16:19729523-19729603 7 1.93e-05 CGTGAC CCGGAAGT CCACTTCGAG chr9:139294606-139294686 60 1.93e-05 GCGCCGCGCG CCGGAAGT CCCGCCTCCT chr20:18548009-18548089 56 1.93e-05 GACGCCCTCA CCGGAAGT CCCGCCTCTG chr20:5093713-5093793 13 1.93e-05 GATCAGTGCG CCGGAAGT GGCGTGCCGG chr11:64008361-64008441 53 1.93e-05 TACCGCTCCG CCGGAAGT GACGCAGGGC chr19:4457800-4457880 33 1.93e-05 TACCTCGCCG CCGGAAGT CCCGCCTTCC chr22:31556073-31556153 61 1.93e-05 CCGGTTGGGG CCGGAAGT CCCTCCGAGA chr13:31191943-31192023 9 1.93e-05 GAGGGCGA CCGGAAGT GCTCACGTCT chr15:40675088-40675168 41 1.93e-05 CGCCTAGCTA CCGGAAGT TTCTATTTGA chr3:49203758-49203838 15 1.93e-05 CCGCTGCGCG CCGGAAGT GCACTGCGCT chr2:233415318-233415398 33 1.93e-05 CCGCGCAAAA CCGGAAGT ACCCGGGCCC chr5:1345160-1345240 47 1.93e-05 ccgccgccTG CCGGAAGT GGACGCGCCG chr5:180237177-180237257 44 1.93e-05 CGCCCGTCCT CCGGAAGT GGGCCCCGGC chr12:112037311-11203739 67 1.93e-05 GGACTCTTTA CCGGAAGT CGGAGG chr12:53574417-53574497 6 1.93e-05 CGAGC CCGGAAGT GGATGCAGCC chr16:84220632-84220712 30 1.93e-05 CCGGTTTGGA CCGGAAGT GCCTCCTGCG chr16:77225006-77225086 19 1.93e-05 AGCTCCGCAA CCGGAAGT GTCTTCTGGG chr11:64085043-64085123 59 1.93e-05 GCCAGGAGAA CCGGAAGT GGCGAACTTG chr9:133454927-133455007 17 1.93e-05 TTCCCTTCCG CCGGAAGT AGGGCGACTT chr15:40331335-40331415 33 1.93e-05 GCAGTGAGAG CCGGAAGT TCGGCCTAGG chr22:29949723-29949803 16 1.93e-05 CCATAGAGAA CCGGAAGT AAGGAAGGGG chr8:144373486-144373566 33 1.93e-05 CAGAGCGTCG CCGGAAGT GCCGAGGGGG chr12:6602506-6602586 35 1.93e-05 GGTCCGCCTG CCGGAAGT TTTGGAGCGC chr7:100861256-100861336 33 1.93e-05 CACACTGAGG CCGGAAGT GGTTTTGCCC chr7:6676886-6676966 12 1.93e-05 ccccgcGTGA CCGGAAGT TCCTcccccc chr11:910781-910861 52 1.93e-05 CTCCAGCGCG CCGGAAGT cccgccccag chr9:128469445-128469525 64 1.93e-05 CCCCGGCGTT CCGGAAGT CCCCGACCG chr16:56485244-56485324 12 1.93e-05 CGTAGGCACG CCGGAAGT GAACCCGGAG chr16:1823141-1823221 7 1.93e-05 GTCCGG CCGGAAGT CACCGGAAGA chr1:155112979-155113059 34 1.93e-05 ATGTTGGCGT CCGGAAGT CCTCCCTGGT chr1:40506323-40506403 60 1.93e-05 CAGTGAGGGC CCGGAAGT GGGTCGCGCG chr5:130506374-130506454 18 1.93e-05 GATCCCTGCG CCGGAAGT GACTGTGCCC chr3:15469034-15469114 38 1.93e-05 CTACCCGACG CCGGAAGT CCCACGGCCT chr19:11616608-11616688 39 1.93e-05 AGGAGCCAGA CCGGAAGT GGCGCGCATC chr17:19281210-19281290 26 1.93e-05 GGCTCAGCCA CCGGAAGT CAGTGGAGGG chr3:48956224-48956304 19 1.93e-05 CGACCCCGAT CCGGAAGT GACGCAACGG chr16:3156498-3156578 42 1.93e-05 GCCCGGCAAG CCGGAAGT TGCAATGGGG chr8:144349537-144349617 35 1.93e-05 CCAGAGCGTC CCGGAAGT GCGCGCCGGC chr8:141474813-141474893 35 1.93e-05 AGGGGAGCGA CCGGAAGT GACGCACGAG chr12:69864109-69864189 44 1.93e-05 CCCCGCTCCC CCGGAAGT GCTTTTCCAA chr8:144816215-144816295 61 1.93e-05 GACCCTCGCC CCGGAAGT CGGGGTGACT chr7:39663101-39663181 57 1.93e-05 CCCCAGCGCC CCGGAAGT GATCTGTGGC chr8:143751361-143751441 17 1.93e-05 CCGCCGCCGG CCGGAAGT GCCGGCCACT chr17:37844296-37844376 37 1.93e-05 TCCGGAGTAA CCGGAAGT TCCTGTGTTC chr8:146052890-146052970 12 1.93e-05 CCCAGGGCGG CCGGAAGT TTGCGGGGCG chr8:144718104-144718184 1 1.93e-05 . CCGGAAGT CCGCACCACT chr17:80009738-80009818 31 1.93e-05 CTTCGCTGCC CCGGAAGT GGACGGCACG chr9:130548251-130548331 50 1.93e-05 cgccgcgagg ccggaagt ggccgtggag chr20:44993021-44993101 24 1.93e-05 AATCTCCCCA CCGGAAGT GCGAGGCCGG chr12:105629990-10563007 27 1.93e-05 GGCAGGGAAA CCGGAAGT GTGGTGAGCT chr8:126575859-126575939 40 2.87e-05 ATAGAAGAGA CAGGAAGT GTTACCCTGG chr19:40791281-40791361 59 2.87e-05 GCGCCACAAA CAGGAAGT GACGTACAAA chr8:22526622-22526702 23 2.87e-05 AACCAGTCTC CAGGAAGT GACGTAAGCC chr20:2644825-2644905 18 2.87e-05 ATGTTTCCCG CAGGAAGT CGCGTGGGAA chr15:101874650-10187473 26 2.87e-05 AGCAGTGACA CAGGAAGT TGTTCTCACC chr22:27068777-27068857 17 2.87e-05 ATTTAGTACA CAGGAAGT CGGCCAGAGA chr5:892893-892973 44 2.87e-05 GGGGCCGCGG CAGGAAGT GGCCCTGCCG chr6:32143865-32143945 44 2.87e-05 CGGGGCCGGC CAGGAAGT GGAGGGCGGT chr14:23938859-23938939 28 2.87e-05 CCTTAGCGCT CAGGAAGT ACGACACCGG chr16:30538124-30538204 11 2.87e-05 CTCCCCCGCA CAGGAAGT GTCCGTCCGC chr18:22006536-22006616 36 6.91e-05 GGCCCGCCAC CCGGAAGC AGATGCCGGC chr18:33552562-33552642 18 6.91e-05 GTGCCTGTTT CCGGAAGC AGCTTGAGTC chr14:75179777-75179857 48 6.91e-05 CTATCCTTTG CCGGAAGC AGTATGTGAA chr1:213224544-213224624 22 6.91e-05 ATAGCCTGGC CCGGAAGC TTCTCTGCTG chr5:114598550-114598630 5 6.91e-05 TGCT CCGGAAGC GACGTCCGCC chr19:56092279-56092359 72 6.91e-05 GGCTGGGAAG CCGGAAGC G chr19:46296040-46296120 33 6.91e-05 GGGCCCCCTC CCGGAAGC CGCTGGCCCG chr2:27994561-27994641 17 6.91e-05 GGGCCGTGCC CCGGAAGC AGTTGTTGTT chr7:102988040-102988120 59 6.91e-05 GAAGACACCA CCGGAAGC AAGGAAGGTG chr20:524445-524525 3 6.91e-05 TG CCGGAAGC GGAAACCCCC chr14:35761567-35761647 19 6.91e-05 GGCTGGTACC CCGGAAGC AGTCGCTGCA chr14:35452073-35452153 62 6.91e-05 GCGGTGTGCC CCGGAAGC GGAAGTAGAT chr1:150039760-150039840 39 6.91e-05 GCCCGGACTC CCGGAAGC CGAATCCCGG chr11:123612341-12361242 49 6.91e-05 GCGCCCGGAA CCGGAAGC GATCGCTCGC chr20:60962054-60962134 42 6.91e-05 GTGGCGTGAC CCGGAAGC GCTCGCCGAG chr19:6393184-6393264 33 6.91e-05 GCCGCCTAAC CCGGAAGC GAAACCCTCG chr12:133287315-13328739 59 6.91e-05 CCCCCGCCGC CCGGAAGC GGCAGCCGGG chr19:4182529-4182609 60 6.91e-05 GCCGCTTCCG CCGGAAGC GGGGCGGGGC chr12:48551251-48551331 40 6.91e-05 AAGGCGTGAC CCGGAAGC AGAAGCTGTC chr12:123465169-12346524 51 6.91e-05 AGCGCCCCGG CCGGAAGC CTCCTCGCCG chr5:443219-443299 43 6.91e-05 GGCGCCGTTG CCGGAAGC GGAAGTGCCC chrX:153775775-153775855 65 6.91e-05 ACACCGGAAG CCGGAAGC GTGGTAGG chr11:1968514-1968594 58 6.91e-05 CTCGCGGACC CCGGAAGC GCGCGTGGCC chr11:71823691-71823771 34 6.91e-05 CGGCGGCGAC CCGGAAGC GCTTCACCCA chr12:123459240-12345932 63 6.91e-05 GGCGGAGGGA CCGGAAGC GCCAGGCAGG chr1:3663892-3663972 52 6.91e-05 CAACCCGGAT CCGGAAGC GCGGGGTCGC chr20:1373816-1373896 22 6.91e-05 GGAAGAGGGA CCGGAAGC CCAGAAGCCC chr2:118845916-118845996 5 6.91e-05 CAGA CCGGAAGC CCTTTTGCCC chr20:19997917-19997997 12 6.91e-05 AACTCGTAGC CCGGAAGC AGTACCCCGT chr8:145980972-145981052 25 6.91e-05 ACGCCGGGAA CCGGAAGC CAGCCGCGGT chr9:129622844-129622924 17 6.91e-05 TGGCGCCTGC CCGGAAGC GCGGGCGTCC chr20:2489762-2489842 56 6.91e-05 GCAGGCGCTT CCGGAAGC TGGGGTCAAC chr19:14800803-14800883 53 6.91e-05 GGCCCCGAGA CCGGAAGC GGAAGTGCGC chr16:89284020-89284100 34 1.08e-04 GAGGCTGGAG GCGGAAGT GACGCCAAAG chr10:135122352-13512243 17 1.08e-04 CCCGACGGCG GCGGAAGT GAGCGTGACG chr20:18268856-18268936 20 1.08e-04 GGTACCGGGT GCGGAAGT CGCTCCAGGG chr14:69658187-69658267 8 1.08e-04 CGCAGGA ACGGAAGT GGTTACGGCC chr16:619905-619985 61 1.08e-04 CGCGGAGCCG GCGGAAGT GGGGCTCGGG chr16:2587874-2587954 57 1.08e-04 ctgcggcgcg acggaagt cctgcccggc chr16:67226016-67226096 52 1.08e-04 AGGAACGGAA GCGGAAGT GGCGGCGGCG chr10:64564240-64564320 2 1.08e-04 G ACGGAAGT GCGTCACTCC chr15:59981476-59981556 55 1.08e-04 AGAAGCCCCG GCGGAAGT GATAACATCC chr13:46038949-46039029 13 1.08e-04 TACGTTTCAA CCGGAAAT AGTCGTACCC chr8:124780654-124780734 6 1.08e-04 AGCGG GCGGAAGT GACGTGTGCC chr12:9102550-9102630 44 1.08e-04 GGTGGCGGAA GCGGAAGT TACGCAGGCA chr13:29233200-29233280 55 1.08e-04 GCCCTCGGAA ACGGAAGT GAGCGGCGGG chr7:157129630-157129710 25 1.08e-04 TCAGGGTCGG GCGGAAGT TGACGCCGCC chr12:54582794-54582874 72 1.08e-04 GCCACTTCCG CCGGAAAT G chr5:93954291-93954371 28 1.08e-04 TGACAACCAC CCGGAAAT GGTACTATCG chr9:140149718-140149798 49 1.08e-04 gcggtgcggg gcggaagt gggcggctgc chr8:117778694-117778774 11 1.27e-04 ATGGGCAGGC CCGGAAGA CAGAGGCGTT chr3:50264982-50265062 27 1.27e-04 TAGAGAGGCC CCGGAAGA GGCGGTGCAG chr5:180288244-180288324 35 1.27e-04 GACCGCACGG CCGGAAGA ACCCGCGCCG chrX:19003064-19003144 61 1.27e-04 GGGACCCAGC CCGGAAGA AAAAGGGGGA chr17:42264290-42264370 68 1.27e-04 CCGGGAGAAG CCGGAAGA GACCG chr9:35732236-35732316 13 1.47e-04 GGGGGGCAGG CAGGAAGC TGCTCTGGCC chr1:155178980-155179060 30 1.66e-04 AGAAGCACAC AAGGAAGT GTTTCCGGGA chr8:42396703-42396783 14 1.66e-04 GACCGGCCGG CAGGAAAT GACGAAGGCA chr22:40742460-40742540 6 1.66e-04 GCGTG AAGGAAGT CCCGCCCCGC chr16:639289-639369 14 1.66e-04 CTGCCCCGGA GAGGAAGT TCCGCCTCAT chr9:138853271-138853351 60 1.66e-04 GGCCACCGCA AAGGAAGT GCGTCACGGG chr1:38273830-38273910 43 1.66e-04 CCGCTTCCGG GAGGAAGT GACGCTCCCA chr16:2771127-2771207 51 1.66e-04 GAGGCTCGGG GAGGAAGT TATTTGGGGC chr9:35749192-35749272 54 2.26e-04 GCGCTTCCGG CCGGAAGG GACTCCGCGG chr10:27443312-27443392 10 2.26e-04 CAATCCGCC CCGGAAGG CGAGGCGCTA chr7:1543998-1544078 59 2.26e-04 TCCGGAACAA CCGGAAGG AAAACAGTGC chr13:114103635-11410371 44 2.26e-04 AGAGACACAC CCGGAAGG AGGGACCCTG chr9:125693792-125693872 37 2.26e-04 CCCAACGGAA CCGGAAGG GCAGCCCTGG chr2:175260406-175260486 13 2.26e-04 AGCCGCCTAA CCGGAACT GCGTTTCCAG chr8:144329064-144329144 18 2.26e-04 AGCGCGGCCG CCGGAAGG GGCGGGTCAG chr2:27294523-27294603 7 2.26e-04 CCTGGA CCGGAACT TCGTAGCGCC chr16:89160227-89160307 41 2.26e-04 CTGTTGGGCG CCGGAACT GGTCCGGCCC chr6:28186702-28186782 37 2.26e-04 GGAGAACGGA CCGGAAGG TGGCCCGTGG chr16:24740918-24740998 26 2.26e-04 CGTGGCGCCC CCGGAAGG GGTTGCCGAG chr17:76374677-76374757 45 3.07e-04 CCCGCCGGGA GCGGAAGC GGAAGCGGCG chr14:75593731-75593811 38 3.07e-04 GCCCCCCGAC CCGGAAAC AGTTCTCTGT chr2:54014107-54014187 43 3.07e-04 GTCGTCTGCC CCGGAAAC GGTGACAGGA chr19:44716613-44716693 5 3.07e-04 CTGT CCGGAAAC AATTGGGCCG chr1:36023012-36023092 23 3.07e-04 CGGGACCGAC CCGGAAAC ACACTCTCCA chr16:81779934-81780014 40 3.07e-04 tggggcggaa acggaagc atggccgcag chr19:44439428-44439508 56 3.07e-04 CCCGGGAGGA ACGGAAGC CGCTGCCCCG chr4:1723005-1723085 66 3.07e-04 GCCCTCCACT CCGGAAAC GGAACCG chr4:41937118-41937198 19 3.21e-04 CCTCTTCCCC ACGGAAAT GAAAGGAGCA chr13:115000285-11500036 71 4.00e-04 CCTGCCTGGA GCGGAAGA GC chr22:46431913-46431993 56 4.00e-04 CCGGGGCGGG ACGGAAGA GCGGGCGGGA chr11:31391341-31391421 44 4.00e-04 GTGACTTCCG GCGGAAGA AGAAGCCGGT chr16:89787327-89787407 49 4.00e-04 CAGCGGACCG CAGGAAGG GACGCGGCCG chr10:71930241-71930321 20 4.58e-04 CAGCTACTCG CCGGATGT ACGTCACACC chr9:140317621-140317701 59 4.58e-04 CGGGCGGGGC GAGGAAGC CGGGCGCACA chr22:35887942-35888022 22 4.58e-04 GCTCCCTGCC CCGGATGT GTTCCCTGCC chr14:45604948-45605028 21 4.98e-04 AAACAAAACA CCGGAACC GCACCGGGGA chr10:124713716-12471379 9 4.98e-04 GCCCAGCC CCGGAACC TCTCTTCCAG chr2:71357676-71357756 8 6.16e-04 GTGCGCC GCGGAACT TTCGGCTCTG chr6:41040220-41040300 16 6.45e-04 CGGTAGCGGG GCGGAAAC GAGCCCCTCT chr10:26986498-26986578 10 6.65e-04 ACCGCAAGC GAGGAAGA GCGAACCGCG chr5:74062967-74063047 42 8.61e-04 CTAGCTAAAA GCGGAAAA CAGAGGCTCG chr1:38325243-38325323 64 8.61e-04 CCTCTTTCCG GAGGAAGG TGGGGACAG chr16:89307673-89307753 29 8.61e-04 gggactcggt gaggaact cgggggatcg chr9:130700122-130700202 61 8.61e-04 GCGGAGCACG CCGGGAGT CGTAGTCCCC chr1:1209207-1209287 20 1.01e-03 CGCTCGCGGG GCGGAACC AGCCTAGCTT chr2:201753979-201754059 27 1.04e-03 CGGCTGCCAA ACGGAAAG GACCACTTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:117014945-11701502 1.9e-05 49_[+1]_23 chr19:1885469-1885549 1.9e-05 41_[+1]_31 chr19:47759716-47759796 1.9e-05 21_[+1]_51 chr21:45432157-45432237 1.9e-05 42_[+1]_30 chr3:13493338-13493418 1.9e-05 37_[+1]_35 chr10:15902517-15902597 1.9e-05 41_[+1]_31 chr3:108308314-108308394 1.9e-05 37_[+1]_35 chr16:75600208-75600288 1.9e-05 46_[+1]_26 chr16:31085542-31085622 1.9e-05 5_[+1]_67 chr17:10600846-10600926 1.9e-05 40_[+1]_32 chr20:34287247-34287327 1.9e-05 19_[+1]_53 chr16:718045-718125 1.9e-05 27_[+1]_45 chr16:19729523-19729603 1.9e-05 6_[+1]_66 chr9:139294606-139294686 1.9e-05 59_[+1]_13 chr20:18548009-18548089 1.9e-05 55_[+1]_17 chr20:5093713-5093793 1.9e-05 12_[+1]_60 chr11:64008361-64008441 1.9e-05 52_[+1]_20 chr19:4457800-4457880 1.9e-05 32_[+1]_40 chr22:31556073-31556153 1.9e-05 60_[+1]_12 chr13:31191943-31192023 1.9e-05 8_[+1]_64 chr15:40675088-40675168 1.9e-05 40_[+1]_32 chr3:49203758-49203838 1.9e-05 14_[+1]_58 chr2:233415318-233415398 1.9e-05 32_[+1]_40 chr5:1345160-1345240 1.9e-05 46_[+1]_26 chr5:180237177-180237257 1.9e-05 43_[+1]_29 chr12:112037311-11203739 1.9e-05 66_[+1]_6 chr12:53574417-53574497 1.9e-05 5_[+1]_67 chr16:84220632-84220712 1.9e-05 29_[+1]_43 chr16:77225006-77225086 1.9e-05 18_[+1]_54 chr11:64085043-64085123 1.9e-05 58_[+1]_14 chr9:133454927-133455007 1.9e-05 16_[+1]_56 chr15:40331335-40331415 1.9e-05 32_[+1]_40 chr22:29949723-29949803 1.9e-05 15_[+1]_57 chr8:144373486-144373566 1.9e-05 32_[+1]_40 chr12:6602506-6602586 1.9e-05 34_[+1]_38 chr7:100861256-100861336 1.9e-05 32_[+1]_40 chr7:6676886-6676966 1.9e-05 11_[+1]_61 chr11:910781-910861 1.9e-05 51_[+1]_21 chr9:128469445-128469525 1.9e-05 63_[+1]_9 chr16:56485244-56485324 1.9e-05 11_[+1]_61 chr16:1823141-1823221 1.9e-05 6_[+1]_66 chr1:155112979-155113059 1.9e-05 33_[+1]_39 chr1:40506323-40506403 1.9e-05 59_[+1]_13 chr5:130506374-130506454 1.9e-05 17_[+1]_55 chr3:15469034-15469114 1.9e-05 37_[+1]_35 chr19:11616608-11616688 1.9e-05 38_[+1]_34 chr17:19281210-19281290 1.9e-05 25_[+1]_47 chr3:48956224-48956304 1.9e-05 18_[+1]_54 chr16:3156498-3156578 1.9e-05 41_[+1]_31 chr8:144349537-144349617 1.9e-05 34_[+1]_38 chr8:141474813-141474893 1.9e-05 34_[+1]_38 chr12:69864109-69864189 1.9e-05 43_[+1]_29 chr8:144816215-144816295 1.9e-05 60_[+1]_12 chr7:39663101-39663181 1.9e-05 56_[+1]_16 chr8:143751361-143751441 1.9e-05 16_[+1]_56 chr17:37844296-37844376 1.9e-05 36_[+1]_36 chr8:146052890-146052970 1.9e-05 11_[+1]_61 chr8:144718104-144718184 1.9e-05 [+1]_72 chr17:80009738-80009818 1.9e-05 30_[+1]_42 chr9:130548251-130548331 1.9e-05 49_[+1]_23 chr20:44993021-44993101 1.9e-05 23_[+1]_49 chr12:105629990-10563007 1.9e-05 26_[+1]_46 chr8:126575859-126575939 2.9e-05 39_[+1]_33 chr19:40791281-40791361 2.9e-05 58_[+1]_14 chr8:22526622-22526702 2.9e-05 22_[+1]_50 chr20:2644825-2644905 2.9e-05 17_[+1]_55 chr15:101874650-10187473 2.9e-05 25_[+1]_47 chr22:27068777-27068857 2.9e-05 16_[+1]_56 chr5:892893-892973 2.9e-05 43_[+1]_29 chr6:32143865-32143945 2.9e-05 43_[+1]_29 chr14:23938859-23938939 2.9e-05 27_[+1]_45 chr16:30538124-30538204 2.9e-05 10_[+1]_62 chr18:22006536-22006616 6.9e-05 35_[+1]_37 chr18:33552562-33552642 6.9e-05 17_[+1]_55 chr14:75179777-75179857 6.9e-05 47_[+1]_25 chr1:213224544-213224624 6.9e-05 21_[+1]_51 chr5:114598550-114598630 6.9e-05 4_[+1]_68 chr19:56092279-56092359 6.9e-05 71_[+1]_1 chr19:46296040-46296120 6.9e-05 32_[+1]_40 chr2:27994561-27994641 6.9e-05 16_[+1]_56 chr7:102988040-102988120 6.9e-05 58_[+1]_14 chr20:524445-524525 6.9e-05 2_[+1]_70 chr14:35761567-35761647 6.9e-05 18_[+1]_54 chr14:35452073-35452153 6.9e-05 61_[+1]_11 chr1:150039760-150039840 6.9e-05 38_[+1]_34 chr11:123612341-12361242 6.9e-05 48_[+1]_24 chr20:60962054-60962134 6.9e-05 41_[+1]_31 chr19:6393184-6393264 6.9e-05 32_[+1]_40 chr12:133287315-13328739 6.9e-05 58_[+1]_14 chr19:4182529-4182609 6.9e-05 59_[+1]_13 chr12:48551251-48551331 6.9e-05 39_[+1]_33 chr12:123465169-12346524 6.9e-05 50_[+1]_22 chr5:443219-443299 6.9e-05 42_[+1]_30 chrX:153775775-153775855 6.9e-05 64_[+1]_8 chr11:1968514-1968594 6.9e-05 57_[+1]_15 chr11:71823691-71823771 6.9e-05 33_[+1]_39 chr12:123459240-12345932 6.9e-05 62_[+1]_10 chr1:3663892-3663972 6.9e-05 51_[+1]_21 chr20:1373816-1373896 6.9e-05 21_[+1]_51 chr2:118845916-118845996 6.9e-05 4_[+1]_68 chr20:19997917-19997997 6.9e-05 11_[+1]_61 chr8:145980972-145981052 6.9e-05 24_[+1]_48 chr9:129622844-129622924 6.9e-05 16_[+1]_56 chr20:2489762-2489842 6.9e-05 55_[+1]_17 chr19:14800803-14800883 6.9e-05 52_[+1]_20 chr16:89284020-89284100 0.00011 33_[+1]_39 chr10:135122352-13512243 0.00011 16_[+1]_56 chr20:18268856-18268936 0.00011 19_[+1]_53 chr14:69658187-69658267 0.00011 7_[+1]_65 chr16:619905-619985 0.00011 60_[+1]_12 chr16:2587874-2587954 0.00011 56_[+1]_16 chr16:67226016-67226096 0.00011 51_[+1]_21 chr10:64564240-64564320 0.00011 1_[+1]_71 chr15:59981476-59981556 0.00011 54_[+1]_18 chr13:46038949-46039029 0.00011 12_[+1]_60 chr8:124780654-124780734 0.00011 5_[+1]_67 chr12:9102550-9102630 0.00011 43_[+1]_29 chr13:29233200-29233280 0.00011 54_[+1]_18 chr7:157129630-157129710 0.00011 24_[+1]_48 chr12:54582794-54582874 0.00011 71_[+1]_1 chr5:93954291-93954371 0.00011 27_[+1]_45 chr9:140149718-140149798 0.00011 48_[+1]_24 chr8:117778694-117778774 0.00013 10_[+1]_62 chr3:50264982-50265062 0.00013 26_[+1]_46 chr5:180288244-180288324 0.00013 34_[+1]_38 chrX:19003064-19003144 0.00013 60_[+1]_12 chr17:42264290-42264370 0.00013 67_[+1]_5 chr9:35732236-35732316 0.00015 12_[+1]_60 chr1:155178980-155179060 0.00017 29_[+1]_43 chr8:42396703-42396783 0.00017 13_[+1]_59 chr22:40742460-40742540 0.00017 5_[+1]_67 chr16:639289-639369 0.00017 13_[+1]_59 chr9:138853271-138853351 0.00017 59_[+1]_13 chr1:38273830-38273910 0.00017 42_[+1]_30 chr16:2771127-2771207 0.00017 50_[+1]_22 chr9:35749192-35749272 0.00023 53_[+1]_19 chr10:27443312-27443392 0.00023 9_[+1]_63 chr7:1543998-1544078 0.00023 58_[+1]_14 chr13:114103635-11410371 0.00023 43_[+1]_29 chr9:125693792-125693872 0.00023 36_[+1]_36 chr2:175260406-175260486 0.00023 12_[+1]_60 chr8:144329064-144329144 0.00023 17_[+1]_55 chr2:27294523-27294603 0.00023 6_[+1]_66 chr16:89160227-89160307 0.00023 40_[+1]_32 chr6:28186702-28186782 0.00023 36_[+1]_36 chr16:24740918-24740998 0.00023 25_[+1]_47 chr17:76374677-76374757 0.00031 44_[+1]_28 chr14:75593731-75593811 0.00031 37_[+1]_35 chr2:54014107-54014187 0.00031 42_[+1]_30 chr19:44716613-44716693 0.00031 4_[+1]_68 chr1:36023012-36023092 0.00031 22_[+1]_50 chr16:81779934-81780014 0.00031 39_[+1]_33 chr19:44439428-44439508 0.00031 55_[+1]_17 chr4:1723005-1723085 0.00031 65_[+1]_7 chr4:41937118-41937198 0.00032 18_[+1]_54 chr13:115000285-11500036 0.0004 70_[+1]_2 chr22:46431913-46431993 0.0004 55_[+1]_17 chr11:31391341-31391421 0.0004 43_[+1]_29 chr16:89787327-89787407 0.0004 48_[+1]_24 chr10:71930241-71930321 0.00046 19_[+1]_53 chr9:140317621-140317701 0.00046 58_[+1]_14 chr22:35887942-35888022 0.00046 21_[+1]_51 chr14:45604948-45605028 0.0005 20_[+1]_52 chr10:124713716-12471379 0.0005 8_[+1]_64 chr2:71357676-71357756 0.00062 7_[+1]_65 chr6:41040220-41040300 0.00065 15_[+1]_57 chr10:26986498-26986578 0.00066 9_[+1]_63 chr5:74062967-74063047 0.00086 41_[+1]_31 chr1:38325243-38325323 0.00086 63_[+1]_9 chr16:89307673-89307753 0.00086 28_[+1]_44 chr9:130700122-130700202 0.00086 60_[+1]_12 chr1:1209207-1209287 0.001 19_[+1]_53 chr2:201753979-201754059 0.001 26_[+1]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCGGAAGT width=8 seqs=173 chr11:117014945-11701502 ( 50) CCGGAAGT 1 chr19:1885469-1885549 ( 42) CCGGAAGT 1 chr19:47759716-47759796 ( 22) CCGGAAGT 1 chr21:45432157-45432237 ( 43) CCGGAAGT 1 chr3:13493338-13493418 ( 38) CCGGAAGT 1 chr10:15902517-15902597 ( 42) CCGGAAGT 1 chr3:108308314-108308394 ( 38) CCGGAAGT 1 chr16:75600208-75600288 ( 47) CCGGAAGT 1 chr16:31085542-31085622 ( 6) CCGGAAGT 1 chr17:10600846-10600926 ( 41) CCGGAAGT 1 chr20:34287247-34287327 ( 20) CCGGAAGT 1 chr16:718045-718125 ( 28) CCGGAAGT 1 chr16:19729523-19729603 ( 7) CCGGAAGT 1 chr9:139294606-139294686 ( 60) CCGGAAGT 1 chr20:18548009-18548089 ( 56) CCGGAAGT 1 chr20:5093713-5093793 ( 13) CCGGAAGT 1 chr11:64008361-64008441 ( 53) CCGGAAGT 1 chr19:4457800-4457880 ( 33) CCGGAAGT 1 chr22:31556073-31556153 ( 61) CCGGAAGT 1 chr13:31191943-31192023 ( 9) CCGGAAGT 1 chr15:40675088-40675168 ( 41) CCGGAAGT 1 chr3:49203758-49203838 ( 15) CCGGAAGT 1 chr2:233415318-233415398 ( 33) CCGGAAGT 1 chr5:1345160-1345240 ( 47) CCGGAAGT 1 chr5:180237177-180237257 ( 44) CCGGAAGT 1 chr12:112037311-11203739 ( 67) CCGGAAGT 1 chr12:53574417-53574497 ( 6) CCGGAAGT 1 chr16:84220632-84220712 ( 30) CCGGAAGT 1 chr16:77225006-77225086 ( 19) CCGGAAGT 1 chr11:64085043-64085123 ( 59) CCGGAAGT 1 chr9:133454927-133455007 ( 17) CCGGAAGT 1 chr15:40331335-40331415 ( 33) CCGGAAGT 1 chr22:29949723-29949803 ( 16) CCGGAAGT 1 chr8:144373486-144373566 ( 33) CCGGAAGT 1 chr12:6602506-6602586 ( 35) CCGGAAGT 1 chr7:100861256-100861336 ( 33) CCGGAAGT 1 chr7:6676886-6676966 ( 12) CCGGAAGT 1 chr11:910781-910861 ( 52) CCGGAAGT 1 chr9:128469445-128469525 ( 64) CCGGAAGT 1 chr16:56485244-56485324 ( 12) CCGGAAGT 1 chr16:1823141-1823221 ( 7) CCGGAAGT 1 chr1:155112979-155113059 ( 34) CCGGAAGT 1 chr1:40506323-40506403 ( 60) CCGGAAGT 1 chr5:130506374-130506454 ( 18) CCGGAAGT 1 chr3:15469034-15469114 ( 38) CCGGAAGT 1 chr19:11616608-11616688 ( 39) CCGGAAGT 1 chr17:19281210-19281290 ( 26) CCGGAAGT 1 chr3:48956224-48956304 ( 19) CCGGAAGT 1 chr16:3156498-3156578 ( 42) CCGGAAGT 1 chr8:144349537-144349617 ( 35) CCGGAAGT 1 chr8:141474813-141474893 ( 35) CCGGAAGT 1 chr12:69864109-69864189 ( 44) CCGGAAGT 1 chr8:144816215-144816295 ( 61) CCGGAAGT 1 chr7:39663101-39663181 ( 57) CCGGAAGT 1 chr8:143751361-143751441 ( 17) CCGGAAGT 1 chr17:37844296-37844376 ( 37) CCGGAAGT 1 chr8:146052890-146052970 ( 12) CCGGAAGT 1 chr8:144718104-144718184 ( 1) CCGGAAGT 1 chr17:80009738-80009818 ( 31) CCGGAAGT 1 chr9:130548251-130548331 ( 50) CCGGAAGT 1 chr20:44993021-44993101 ( 24) CCGGAAGT 1 chr12:105629990-10563007 ( 27) CCGGAAGT 1 chr8:126575859-126575939 ( 40) CAGGAAGT 1 chr19:40791281-40791361 ( 59) CAGGAAGT 1 chr8:22526622-22526702 ( 23) CAGGAAGT 1 chr20:2644825-2644905 ( 18) CAGGAAGT 1 chr15:101874650-10187473 ( 26) CAGGAAGT 1 chr22:27068777-27068857 ( 17) CAGGAAGT 1 chr5:892893-892973 ( 44) CAGGAAGT 1 chr6:32143865-32143945 ( 44) CAGGAAGT 1 chr14:23938859-23938939 ( 28) CAGGAAGT 1 chr16:30538124-30538204 ( 11) CAGGAAGT 1 chr18:22006536-22006616 ( 36) CCGGAAGC 1 chr18:33552562-33552642 ( 18) CCGGAAGC 1 chr14:75179777-75179857 ( 48) CCGGAAGC 1 chr1:213224544-213224624 ( 22) CCGGAAGC 1 chr5:114598550-114598630 ( 5) CCGGAAGC 1 chr19:56092279-56092359 ( 72) CCGGAAGC 1 chr19:46296040-46296120 ( 33) CCGGAAGC 1 chr2:27994561-27994641 ( 17) CCGGAAGC 1 chr7:102988040-102988120 ( 59) CCGGAAGC 1 chr20:524445-524525 ( 3) CCGGAAGC 1 chr14:35761567-35761647 ( 19) CCGGAAGC 1 chr14:35452073-35452153 ( 62) CCGGAAGC 1 chr1:150039760-150039840 ( 39) CCGGAAGC 1 chr11:123612341-12361242 ( 49) CCGGAAGC 1 chr20:60962054-60962134 ( 42) CCGGAAGC 1 chr19:6393184-6393264 ( 33) CCGGAAGC 1 chr12:133287315-13328739 ( 59) CCGGAAGC 1 chr19:4182529-4182609 ( 60) CCGGAAGC 1 chr12:48551251-48551331 ( 40) CCGGAAGC 1 chr12:123465169-12346524 ( 51) CCGGAAGC 1 chr5:443219-443299 ( 43) CCGGAAGC 1 chrX:153775775-153775855 ( 65) CCGGAAGC 1 chr11:1968514-1968594 ( 58) CCGGAAGC 1 chr11:71823691-71823771 ( 34) CCGGAAGC 1 chr12:123459240-12345932 ( 63) CCGGAAGC 1 chr1:3663892-3663972 ( 52) CCGGAAGC 1 chr20:1373816-1373896 ( 22) CCGGAAGC 1 chr2:118845916-118845996 ( 5) CCGGAAGC 1 chr20:19997917-19997997 ( 12) CCGGAAGC 1 chr8:145980972-145981052 ( 25) CCGGAAGC 1 chr9:129622844-129622924 ( 17) CCGGAAGC 1 chr20:2489762-2489842 ( 56) CCGGAAGC 1 chr19:14800803-14800883 ( 53) CCGGAAGC 1 chr16:89284020-89284100 ( 34) GCGGAAGT 1 chr10:135122352-13512243 ( 17) GCGGAAGT 1 chr20:18268856-18268936 ( 20) GCGGAAGT 1 chr14:69658187-69658267 ( 8) ACGGAAGT 1 chr16:619905-619985 ( 61) GCGGAAGT 1 chr16:2587874-2587954 ( 57) ACGGAAGT 1 chr16:67226016-67226096 ( 52) GCGGAAGT 1 chr10:64564240-64564320 ( 2) ACGGAAGT 1 chr15:59981476-59981556 ( 55) GCGGAAGT 1 chr13:46038949-46039029 ( 13) CCGGAAAT 1 chr8:124780654-124780734 ( 6) GCGGAAGT 1 chr12:9102550-9102630 ( 44) GCGGAAGT 1 chr13:29233200-29233280 ( 55) ACGGAAGT 1 chr7:157129630-157129710 ( 25) GCGGAAGT 1 chr12:54582794-54582874 ( 72) CCGGAAAT 1 chr5:93954291-93954371 ( 28) CCGGAAAT 1 chr9:140149718-140149798 ( 49) GCGGAAGT 1 chr8:117778694-117778774 ( 11) CCGGAAGA 1 chr3:50264982-50265062 ( 27) CCGGAAGA 1 chr5:180288244-180288324 ( 35) CCGGAAGA 1 chrX:19003064-19003144 ( 61) CCGGAAGA 1 chr17:42264290-42264370 ( 68) CCGGAAGA 1 chr9:35732236-35732316 ( 13) CAGGAAGC 1 chr1:155178980-155179060 ( 30) AAGGAAGT 1 chr8:42396703-42396783 ( 14) CAGGAAAT 1 chr22:40742460-40742540 ( 6) AAGGAAGT 1 chr16:639289-639369 ( 14) GAGGAAGT 1 chr9:138853271-138853351 ( 60) AAGGAAGT 1 chr1:38273830-38273910 ( 43) GAGGAAGT 1 chr16:2771127-2771207 ( 51) GAGGAAGT 1 chr9:35749192-35749272 ( 54) CCGGAAGG 1 chr10:27443312-27443392 ( 10) CCGGAAGG 1 chr7:1543998-1544078 ( 59) CCGGAAGG 1 chr13:114103635-11410371 ( 44) CCGGAAGG 1 chr9:125693792-125693872 ( 37) CCGGAAGG 1 chr2:175260406-175260486 ( 13) CCGGAACT 1 chr8:144329064-144329144 ( 18) CCGGAAGG 1 chr2:27294523-27294603 ( 7) CCGGAACT 1 chr16:89160227-89160307 ( 41) CCGGAACT 1 chr6:28186702-28186782 ( 37) CCGGAAGG 1 chr16:24740918-24740998 ( 26) CCGGAAGG 1 chr17:76374677-76374757 ( 45) GCGGAAGC 1 chr14:75593731-75593811 ( 38) CCGGAAAC 1 chr2:54014107-54014187 ( 43) CCGGAAAC 1 chr19:44716613-44716693 ( 5) CCGGAAAC 1 chr1:36023012-36023092 ( 23) CCGGAAAC 1 chr16:81779934-81780014 ( 40) ACGGAAGC 1 chr19:44439428-44439508 ( 56) ACGGAAGC 1 chr4:1723005-1723085 ( 66) CCGGAAAC 1 chr4:41937118-41937198 ( 19) ACGGAAAT 1 chr13:115000285-11500036 ( 71) GCGGAAGA 1 chr22:46431913-46431993 ( 56) ACGGAAGA 1 chr11:31391341-31391421 ( 44) GCGGAAGA 1 chr16:89787327-89787407 ( 49) CAGGAAGG 1 chr10:71930241-71930321 ( 20) CCGGATGT 1 chr9:140317621-140317701 ( 59) GAGGAAGC 1 chr22:35887942-35888022 ( 22) CCGGATGT 1 chr14:45604948-45605028 ( 21) CCGGAACC 1 chr10:124713716-12471379 ( 9) CCGGAACC 1 chr2:71357676-71357756 ( 8) GCGGAACT 1 chr6:41040220-41040300 ( 16) GCGGAAAC 1 chr10:26986498-26986578 ( 10) GAGGAAGA 1 chr5:74062967-74063047 ( 42) GCGGAAAA 1 chr1:38325243-38325323 ( 64) GAGGAAGG 1 chr16:89307673-89307753 ( 29) GAGGAACT 1 chr9:130700122-130700202 ( 61) CCGGGAGT 1 chr1:1209207-1209287 ( 20) GCGGAACC 1 chr2:201753979-201754059 ( 27) ACGGAAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.7259 E= 8.9e-205 -124 125 -131 -1408 -30 138 -1408 -1408 -1408 -1408 154 -1408 -1408 -1408 154 -1408 260 -1408 -589 -1408 260 -1408 -1408 -378 -112 -285 136 -1408 -150 -30 -243 193 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 173 E= 8.9e-205 0.069364 0.791908 0.138728 0.000000 0.132948 0.867052 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.994220 0.000000 0.005780 0.000000 0.988439 0.000000 0.000000 0.011561 0.075145 0.046243 0.878613 0.000000 0.057803 0.271676 0.063584 0.606936 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 regular expression -------------------------------------------------------------------------------- CCGGAAG[TC] -------------------------------------------------------------------------------- Time 4.91 secs. ******************************************************************************** ******************************************************************************** MOTIF RCTTCCGG MEME-2 width = 8 sites = 146 llr = 1230 E-value = 2.7e-165 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 5::::::: pos.-specific C :8::aa:2 probability G 4:::::98 matrix T 12aa:::: bits 2.6 ** 2.4 ** 2.1 ** 1.9 ** Relative 1.6 **** Entropy 1.3 ***** (12.2 bits) 1.1 ****** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ACTTCCGG consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:117014945-11701502 15 1.82e-05 TGGGGGCGGG ACTTCCGG AAGCCATTTG chr12:56320872-56320952 38 1.82e-05 AACGCAAACC ACTTCCGG CGTGAGCGGG chr10:71930241-71930321 48 1.82e-05 CCTCCCCGGG ACTTCCGG GCGCGTAATG chr19:8070622-8070702 34 1.82e-05 GAGAGGCGGG ACTTCCGG TCGGCGCCGC chr17:56595591-56595671 56 1.82e-05 GCCTAAAGCC ACTTCCGG TGATGGCCCC chr2:85839181-85839261 34 1.82e-05 CCGCATCCTG ACTTCCGG TCTGGGAGGC chr22:41215339-41215419 52 1.82e-05 CCCTAGAACC ACTTCCGG GTCGCGGGGC chrX:150565620-150565700 39 1.82e-05 GCGAACGGGC ACTTCCGG CGCGAACCGC chr6:33257261-33257341 69 1.82e-05 TCAGAAAGAA ACTTCCGG CACA chr18:33552562-33552642 68 1.82e-05 TGGGAAGCCG ACTTCCGG CGCCC chr16:89307673-89307753 5 1.82e-05 aggg aCTTCCgg gggtaaggga chr13:115000285-11500036 46 1.82e-05 TTTGCTGTGG ACTTCCGG GGCGGGGCCT chr10:27443312-27443392 38 1.82e-05 ACTCAACAGT ACTTCCGG GGCAAGTGAG chr7:1543998-1544078 46 1.82e-05 CGAGGACCCG ACTTCCGG AACAACCGGA chr14:75348568-75348648 28 1.82e-05 GGCCCGCCCC ACTTCCGG TTGTTGTCCG chr8:22526622-22526702 1 1.82e-05 . ACTTCCGG ATTCAACCAG chr7:102988040-102988120 26 1.82e-05 AGCCCAATTT ACTTCCGG TGGGGAAGGG chr20:2644825-2644905 70 1.82e-05 CCGTACCCCG ACTTCCGG CCT chr16:771122-771202 24 1.82e-05 TCTGCCGGCC ACTTCCGG TGTCGCGCGG chr5:158690235-158690315 63 1.82e-05 CCCGCCCTTC ACTTCCGG TCGCTTTCGG chr10:124713716-12471379 73 1.82e-05 AGGCAAAGCG ACTTCCGG chr19:11039388-11039468 9 1.82e-05 GGGAAGCC ACTTCCGG TAAAGTTGGC chr16:69166446-69166526 59 1.82e-05 CGCCAGGAGC ACTTCCGG GGCAGAGCCT chr9:140118123-140118203 12 1.82e-05 GGTGGGCGGG ACTTCCGG CGCCTGCGCA chr14:35761567-35761647 37 1.82e-05 AGTCGCTGCA ACTTCCGG GAGGTGCTTG chr4:153701057-153701137 55 1.82e-05 CGGTCTCCTC ACTTCCGG CTTCGCTGCT chr22:46431913-46431993 42 1.82e-05 CCTCGTCCTG ACTTCCGG GGCGGGACGG chr2:241075694-241075774 33 1.82e-05 CTCTAGGCTC ACTTCCGG CCTCAGAGCC chr22:46731540-46731620 62 1.82e-05 CCGGGGCGGG ACTTCCGG CAAGGCGCGG chr11:64085043-64085123 14 1.82e-05 CCGCTGCCTC ACTTCCGG GGATGCTCCT chr4:41937118-41937198 36 1.82e-05 TGAAAGGAGC ACTTCCGG GTTCGGCAAT chr1:173837448-173837528 46 1.82e-05 GGGGGATTTC ACTTCCGG GACGGTGTTC chr5:443219-443299 72 1.82e-05 CGCGCTGTCC ACTTCCGG C chr17:79849461-79849541 31 1.82e-05 CCGGCACGTC ACTTCCGG CGCCGCGTGA chrX:153775775-153775855 33 1.82e-05 TTGTGTTTTT ACTTCCGG ATCCCACAGC chr9:134406625-134406705 35 1.82e-05 CGGAGCGATC ACTTCCGG GAGGCGCGCG chr13:29233200-29233280 22 1.82e-05 GGACGGACGC ACTTCCGG CGGATGTGGG chr7:6676886-6676966 63 1.82e-05 ggccggcggT ACTTCCGG TGCCCACGCG chr22:43010916-43010996 24 1.82e-05 GCGACGAACT ACTTCCGG CGTCCGCGGA chr16:89787327-89787407 68 1.82e-05 ACGCGGCCGC ACTTCCGG CGACG chr7:5553423-5553503 12 1.82e-05 GGCTCTCGTC ACTTCCGG CGCCCGCCTA chr3:48956224-48956304 45 1.82e-05 GGCGCCAAGC ACTTCCGG AGCTGTGGGG chr20:19997917-19997997 64 1.82e-05 GCTCCGGGAG ACTTCCGG CAGGGCGGG chr10:1102645-1102725 8 1.82e-05 GGGCGTG ACTTCCGG CGCCGCCGGG chr17:37844296-37844376 24 1.82e-05 TGAAGCTTCC ACTTCCGG AGTAACCGGA chr8:145582177-145582257 47 1.82e-05 CCGGGGCGGG ACTTCCGG TCGTGGGCCA chr16:24740918-24740998 54 1.82e-05 TGGGGCATTC ACTTCCGG TCTGGGGCCT chr19:9938501-9938581 48 6.48e-05 TAGGGGCAGG GCTTCCGG CCTCGAACTT chr7:91875219-91875299 16 6.48e-05 CTATGAAATC GCTTCCGG GTTCACACCC chr3:108308314-108308394 17 6.48e-05 GCTCTCAGAA GCTTCCGG ATCCGGTCGG chr17:10600846-10600926 17 6.48e-05 CCTCCCCGCG ATTTCCGG TAGCGTTCCG chr19:9879384-9879464 55 6.48e-05 TGGCACTTCC GCTTCCGG TTGCGCACGG chr9:139294606-139294686 26 6.48e-05 CAGACTCGAC GCTTCCGG CGGCTGCAGA chr14:75179777-75179857 29 6.48e-05 AGGAGTTTCC GCTTCCGG GCTATCCTTT chr19:8942983-8943063 11 6.48e-05 CCGCGCTTCC GCTTCCGG TCTGGGGAGA chr9:35749192-35749272 46 6.48e-05 CCTGCCGGGC GCTTCCGG CCGGAAGGGA chr8:124780654-124780734 31 6.48e-05 GCCCAGAGCC ATTTCCGG CGGCCCGAAA chr3:49203758-49203838 36 6.48e-05 CTGCGCTTCC GCTTCCGG GACCCAGCCC chr8:117778694-117778774 53 6.48e-05 AAGGCGCTTC ATTTCCGG GTGAAACTGG chr19:45542290-45542370 24 6.48e-05 TTTCATTTCC GCTTCCGG TGCGGGCCGC chr11:45939414-45939494 27 6.48e-05 CCTCCTTCCT GCTTCCGG TCTTAGGCCC chr5:1345160-1345240 26 6.48e-05 cccgcgcgcc gcttccgg gccccgccgc chr12:53574417-53574497 57 6.48e-05 AGGGGGAAGT GCTTCCGG GGAAACGGGC chr3:178865854-178865934 46 6.48e-05 TTGCGCATCT GCTTCCGG GGGATTGTAG chr3:50264982-50265062 59 6.48e-05 CCCCGAGGCC GCTTCCGG CTTCGGCTCT chr2:175260406-175260486 65 6.48e-05 AAAGGTGACA GCTTCCGG CAACTGAT chr10:102747245-10274732 20 6.48e-05 AAACCTCGAG GCTTCCGG TTCCGGGACG chr14:21852191-21852271 26 6.48e-05 TGCCCTTTCC GCTTCCGG GTCCCAACAG chr22:43485418-43485498 72 6.48e-05 CGCTGCGACT ATTTCCGG A chr12:6602506-6602586 19 6.48e-05 CCGCCTCAGT GCTTCCGG TCCGCCTGCC chr17:1945280-1945360 27 6.48e-05 GGGAAAGACC GCTTCCGG TGCTTCCGTC chr22:50639386-50639466 34 6.48e-05 GCGGGGCGGG GCTTCCGG GCGGGGCAGG chr3:52740064-52740144 46 6.48e-05 GGAGACTTCC GCTTCCGG GGCCGCCGCC chr5:892893-892973 71 6.48e-05 GGGCCCGAGC GCTTCCGG GT chr1:40506323-40506403 27 6.48e-05 CCGGCGGCTC ATTTCCGG TGGGGGCGCC chr2:27294523-27294603 45 6.48e-05 CGAACAAGCC GCTTCCGG CGGGGGGCGC chr13:41345311-41345391 40 6.48e-05 CCTCTCTTCC GCTTCCGG CCTGGCGCCT chr19:56116922-56117002 30 6.48e-05 CGCGACTTCC GCTTCcgg gcgggcgggc chr17:42264290-42264370 54 6.48e-05 TGGTATAACA GCTTCCGG GAGAAGCCGG chr5:93954291-93954371 45 6.48e-05 TGGTACTATC GCTTCCGG GGCTGCCTAG chr9:136223318-136223398 31 6.48e-05 ccccgcGGGC GCTTCCGG GACGCAGGAG chr9:129622844-129622924 55 6.48e-05 gccgggaagc gcttccgg gggcgggggg chr1:1209207-1209287 40 6.48e-05 CCTAGCTTCT GCTTCCGG TGCGCGGTCC chr1:38273830-38273910 65 6.48e-05 CTCCCAGCCA GCTTCCGG TCCAGGAG chr16:22019347-22019427 37 6.48e-05 CCGCGGCTTC GCTTCCGG GTGAGGGGCG chr1:38325243-38325323 44 8.25e-05 CCCTAACGTC ACTTCCGC TTCCTCTTTC chr15:40675088-40675168 26 8.25e-05 ATTCCCACCC ACTTCCGC CTAGCTACCG chr19:56110876-56110956 31 8.25e-05 GGGcccctcg acttccgc ctcagctccc chr16:2059862-2059942 19 8.25e-05 GCGCGTCGCG ACTTCCGC CTCAGCGCGG chr5:180237177-180237257 29 8.25e-05 CACCGCAGCC ACTTCCGC CCGTCCTCCG chr3:88199008-88199088 51 8.25e-05 TTTGGCGATT ACTTCCGC CCAGGGGCCT chr12:133287315-13328739 42 8.25e-05 AGGAGGCGGG ACTTCCGC CCCCGCCGCC chr15:40331335-40331415 60 8.25e-05 GCTGGGCGGG ACTTCCGC TACTAGACTT chr2:201753979-201754059 39 8.25e-05 GGAAAGGACC ACTTCCGC CCAGCTCTCC chr5:180288244-180288324 63 8.25e-05 GCCCTGGGGC ACTTCCGC GCCCTCTCTG chr9:104296023-104296103 17 8.25e-05 TCCGTACGTC ACTTCCGC CCGGCGGGGT chr3:15469034-15469114 3 8.25e-05 CC ACTTCCGC TAGGAACCCG chr3:47844553-47844633 26 8.25e-05 CGGTGGCGGG ACTTCCGC CACGGGACTC chr17:38975325-38975405 58 8.25e-05 cgccgccgaa acttccgc cgccgcgtcc chr20:44993021-44993101 73 8.25e-05 ACGGGCGGTA ACTTCCGC chr16:89284020-89284100 65 1.00e-04 CGCCGGCCCC TCTTCCGG CGCCGGCC chr16:19729523-19729603 54 1.00e-04 GGTTCCGGCT TCTTCCGG GTCGCGGCCT chr22:31556073-31556153 47 1.00e-04 GAAATTAACC TCTTCCGG TTGGGGCCGG chr16:84220632-84220712 16 1.00e-04 CTACCCACGG TCTTCCGG TTTGGACCGG chr12:498740-498820 35 1.00e-04 CGTGACGCTT TCTTCCGG CGCGGAGGAA chr9:130700122-130700202 34 1.00e-04 GGGTCCACGC TCTTCCGG CTTTGGACTG chr8:145980972-145981052 54 1.00e-04 CCGCCCGGAT TCTTCCGG GGCCGCTCTG chr13:41837687-41837767 45 1.00e-04 CTGGTTCACT TCTTCCGG GTTAACGCAC chr1:155178980-155179060 38 1.18e-04 ACAAGGAAGT GTTTCCGG GACAGAGGGT chr14:75593731-75593811 56 1.18e-04 AGTTCTCTGT GTTTCCGG CCTGGCTGAG chr2:71357676-71357756 62 1.18e-04 TTGCCGCGCG GTTTCCGG GCGGCTCCCT chr19:2950594-2950674 69 1.18e-04 GGATGCTTCC GTTTCCGG TTCC chr8:144373486-144373566 73 1.18e-04 GGAGACTGGC GTTTCCGG chr9:129567254-129567334 39 1.18e-04 ACCGGGAAGC GTTTCCGG GGGCTGAAGG chr7:44084174-44084254 65 1.18e-04 GTGGGGCGGG GTTTCCGG TTGTCGGA chr6:32143865-32143945 29 1.18e-04 ACGCCTGCTG GTTTCCGG GGCCGGCCAG chr14:21458083-21458163 56 1.18e-04 CTGTATTTCC GTTTCCGG TTCGCCTCCG chr10:26986498-26986578 62 1.18e-04 CCTGTGCCAG GTTTCCGG CTCCGGGTCC chr8:146052890-146052970 55 1.18e-04 GCCAAGGCCC GTTTCCGG CGGCGTCGCG chr5:74062967-74063047 20 1.27e-04 CCTGCCAGCA ACTTCCGT CCTCCTAGCT chr19:36236289-36236369 42 1.27e-04 CTCTTACGTC ACTTCCGT TGCTTAGGAG chr19:14800803-14800883 28 1.27e-04 AGCCACAGCC ACTTCCGT TCCCGGCGGC chr16:3162500-3162580 58 1.35e-04 TCTGGGAGGG ACTTCCTG TCTTCCCTAC chr22:40742460-40742540 52 1.81e-04 CCAGGTTTCC GCTTCCGC TCTTCCCTGG chr1:155112979-155113059 61 1.81e-04 TTCACGTTCC GCTTCCGC GCGGCCTTCT chr20:2489762-2489842 40 1.81e-04 CTCTGCGGCA GCTTCCGC AGGCGCTTCC chr9:125693792-125693872 68 1.89e-04 GACAAAGACA ACTTCCAG GTCCC chr11:62495868-62495948 45 1.89e-04 ACTCCCTTCT ACTTCCAG GTCGGGGGGG chr9:133454927-133455007 38 1.98e-04 GCGACTTTCC TTTTCCGG CTACGGGTCC chr17:61627737-61627817 53 2.19e-04 GGGTCCGGCG GCTTCCGT TCCGAGAGGG chr5:130506374-130506454 59 2.19e-04 CGTCCAGGTG ATTTCCGT TCTCTTCTGG chr3:125314419-125314499 19 2.95e-04 TCCCGCCTTC CCTTCCGG AGTAGCGTGA chr2:174830143-174830223 68 2.95e-04 CAGGCGGCGC GCTTCCTG TTTGC chr8:144329064-144329144 45 2.95e-04 GCGGGCGGGC ATTTCCTG CCGGTGCCTA chr17:7218669-7218749 55 2.95e-04 CCGGCCGAGT CCTTCCGG AGTCACGGCG chr7:157129630-157129710 63 2.95e-04 CGCGTGACGC ATTTCCTG TTTGTTGTTG chr12:69864109-69864189 8 3.31e-04 TGAGAGC AGTTCCGG TGCCAAAACC chr10:35625331-35625411 18 3.54e-04 CCGCCGATCT GCTTCCAg ggcagaggga chr1:169337259-169337339 50 3.63e-04 TCCGCTTTTC ACTTACGG AGGCCTTACA chr9:35812269-35812349 26 4.38e-04 GGGAGGTCCG CTTTCCGG TCCCGGCGGC chr17:61904501-61904581 8 4.38e-04 CTCGAGG TTTTCCGC CATTTTGAGT chr20:18548009-18548089 22 4.86e-04 GCTCCTTAAT GGTTCCGG CGGCAGGGAC chr3:49158239-49158319 29 4.86e-04 GGTCGGTTCC GGTTccgg cgcgcccctc chr12:123465169-12346524 71 5.82e-04 CCTCGCCGCC GCTTCCTC TC chr11:1968514-1968594 40 5.82e-04 gcgcgCTGCT CCTTCCGC CTCGCGGACC chr1:19811988-19812068 12 6.30e-04 AGGGCCCGGC GCTTCCAC TTCCCCGGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:117014945-11701502 1.8e-05 14_[+2]_58 chr12:56320872-56320952 1.8e-05 37_[+2]_35 chr10:71930241-71930321 1.8e-05 47_[+2]_25 chr19:8070622-8070702 1.8e-05 33_[+2]_39 chr17:56595591-56595671 1.8e-05 55_[+2]_17 chr2:85839181-85839261 1.8e-05 33_[+2]_39 chr22:41215339-41215419 1.8e-05 51_[+2]_21 chrX:150565620-150565700 1.8e-05 38_[+2]_34 chr6:33257261-33257341 1.8e-05 68_[+2]_4 chr18:33552562-33552642 1.8e-05 67_[+2]_5 chr16:89307673-89307753 1.8e-05 4_[+2]_68 chr13:115000285-11500036 1.8e-05 45_[+2]_27 chr10:27443312-27443392 1.8e-05 37_[+2]_35 chr7:1543998-1544078 1.8e-05 45_[+2]_27 chr14:75348568-75348648 1.8e-05 27_[+2]_45 chr8:22526622-22526702 1.8e-05 [+2]_72 chr7:102988040-102988120 1.8e-05 25_[+2]_47 chr20:2644825-2644905 1.8e-05 69_[+2]_3 chr16:771122-771202 1.8e-05 23_[+2]_49 chr5:158690235-158690315 1.8e-05 62_[+2]_10 chr10:124713716-12471379 1.8e-05 72_[+2] chr19:11039388-11039468 1.8e-05 8_[+2]_64 chr16:69166446-69166526 1.8e-05 58_[+2]_14 chr9:140118123-140118203 1.8e-05 11_[+2]_61 chr14:35761567-35761647 1.8e-05 36_[+2]_36 chr4:153701057-153701137 1.8e-05 54_[+2]_18 chr22:46431913-46431993 1.8e-05 41_[+2]_31 chr2:241075694-241075774 1.8e-05 32_[+2]_40 chr22:46731540-46731620 1.8e-05 61_[+2]_11 chr11:64085043-64085123 1.8e-05 13_[+2]_59 chr4:41937118-41937198 1.8e-05 35_[+2]_37 chr1:173837448-173837528 1.8e-05 45_[+2]_27 chr5:443219-443299 1.8e-05 71_[+2]_1 chr17:79849461-79849541 1.8e-05 30_[+2]_42 chrX:153775775-153775855 1.8e-05 32_[+2]_40 chr9:134406625-134406705 1.8e-05 34_[+2]_38 chr13:29233200-29233280 1.8e-05 21_[+2]_51 chr7:6676886-6676966 1.8e-05 62_[+2]_10 chr22:43010916-43010996 1.8e-05 23_[+2]_49 chr16:89787327-89787407 1.8e-05 67_[+2]_5 chr7:5553423-5553503 1.8e-05 11_[+2]_61 chr3:48956224-48956304 1.8e-05 44_[+2]_28 chr20:19997917-19997997 1.8e-05 63_[+2]_9 chr10:1102645-1102725 1.8e-05 7_[+2]_65 chr17:37844296-37844376 1.8e-05 23_[+2]_49 chr8:145582177-145582257 1.8e-05 46_[+2]_26 chr16:24740918-24740998 1.8e-05 53_[+2]_19 chr19:9938501-9938581 6.5e-05 47_[+2]_25 chr7:91875219-91875299 6.5e-05 15_[+2]_57 chr3:108308314-108308394 6.5e-05 16_[+2]_56 chr17:10600846-10600926 6.5e-05 16_[+2]_56 chr19:9879384-9879464 6.5e-05 54_[+2]_18 chr9:139294606-139294686 6.5e-05 25_[+2]_47 chr14:75179777-75179857 6.5e-05 28_[+2]_44 chr19:8942983-8943063 6.5e-05 10_[+2]_62 chr9:35749192-35749272 6.5e-05 45_[+2]_27 chr8:124780654-124780734 6.5e-05 30_[+2]_42 chr3:49203758-49203838 6.5e-05 35_[+2]_37 chr8:117778694-117778774 6.5e-05 52_[+2]_20 chr19:45542290-45542370 6.5e-05 23_[+2]_49 chr11:45939414-45939494 6.5e-05 26_[+2]_46 chr5:1345160-1345240 6.5e-05 25_[+2]_47 chr12:53574417-53574497 6.5e-05 56_[+2]_16 chr3:178865854-178865934 6.5e-05 45_[+2]_27 chr3:50264982-50265062 6.5e-05 58_[+2]_14 chr2:175260406-175260486 6.5e-05 64_[+2]_8 chr10:102747245-10274732 6.5e-05 19_[+2]_53 chr14:21852191-21852271 6.5e-05 25_[+2]_47 chr22:43485418-43485498 6.5e-05 71_[+2]_1 chr12:6602506-6602586 6.5e-05 18_[+2]_54 chr17:1945280-1945360 6.5e-05 26_[+2]_46 chr22:50639386-50639466 6.5e-05 33_[+2]_39 chr3:52740064-52740144 6.5e-05 45_[+2]_27 chr5:892893-892973 6.5e-05 70_[+2]_2 chr1:40506323-40506403 6.5e-05 26_[+2]_46 chr2:27294523-27294603 6.5e-05 44_[+2]_28 chr13:41345311-41345391 6.5e-05 39_[+2]_33 chr19:56116922-56117002 6.5e-05 29_[+2]_43 chr17:42264290-42264370 6.5e-05 53_[+2]_19 chr5:93954291-93954371 6.5e-05 44_[+2]_28 chr9:136223318-136223398 6.5e-05 30_[+2]_42 chr9:129622844-129622924 6.5e-05 54_[+2]_18 chr1:1209207-1209287 6.5e-05 39_[+2]_33 chr1:38273830-38273910 6.5e-05 64_[+2]_8 chr16:22019347-22019427 6.5e-05 36_[+2]_36 chr1:38325243-38325323 8.3e-05 43_[+2]_29 chr15:40675088-40675168 8.3e-05 25_[+2]_47 chr19:56110876-56110956 8.3e-05 30_[+2]_42 chr16:2059862-2059942 8.3e-05 18_[+2]_54 chr5:180237177-180237257 8.3e-05 28_[+2]_44 chr3:88199008-88199088 8.3e-05 50_[+2]_22 chr12:133287315-13328739 8.3e-05 41_[+2]_31 chr15:40331335-40331415 8.3e-05 59_[+2]_13 chr2:201753979-201754059 8.3e-05 38_[+2]_34 chr5:180288244-180288324 8.3e-05 62_[+2]_10 chr9:104296023-104296103 8.3e-05 16_[+2]_56 chr3:15469034-15469114 8.3e-05 2_[+2]_70 chr3:47844553-47844633 8.3e-05 25_[+2]_47 chr17:38975325-38975405 8.3e-05 57_[+2]_15 chr20:44993021-44993101 8.3e-05 72_[+2] chr16:89284020-89284100 0.0001 64_[+2]_8 chr16:19729523-19729603 0.0001 53_[+2]_19 chr22:31556073-31556153 0.0001 46_[+2]_26 chr16:84220632-84220712 0.0001 15_[+2]_57 chr12:498740-498820 0.0001 34_[+2]_38 chr9:130700122-130700202 0.0001 33_[+2]_39 chr8:145980972-145981052 0.0001 53_[+2]_19 chr13:41837687-41837767 0.0001 44_[+2]_28 chr1:155178980-155179060 0.00012 37_[+2]_35 chr14:75593731-75593811 0.00012 55_[+2]_17 chr2:71357676-71357756 0.00012 61_[+2]_11 chr19:2950594-2950674 0.00012 68_[+2]_4 chr8:144373486-144373566 0.00012 72_[+2] chr9:129567254-129567334 0.00012 38_[+2]_34 chr7:44084174-44084254 0.00012 64_[+2]_8 chr6:32143865-32143945 0.00012 28_[+2]_44 chr14:21458083-21458163 0.00012 55_[+2]_17 chr10:26986498-26986578 0.00012 61_[+2]_11 chr8:146052890-146052970 0.00012 54_[+2]_18 chr5:74062967-74063047 0.00013 19_[+2]_53 chr19:36236289-36236369 0.00013 41_[+2]_31 chr19:14800803-14800883 0.00013 27_[+2]_45 chr16:3162500-3162580 0.00014 57_[+2]_15 chr22:40742460-40742540 0.00018 51_[+2]_21 chr1:155112979-155113059 0.00018 60_[+2]_12 chr20:2489762-2489842 0.00018 39_[+2]_33 chr9:125693792-125693872 0.00019 67_[+2]_5 chr11:62495868-62495948 0.00019 44_[+2]_28 chr9:133454927-133455007 0.0002 37_[+2]_35 chr17:61627737-61627817 0.00022 52_[+2]_20 chr5:130506374-130506454 0.00022 58_[+2]_14 chr3:125314419-125314499 0.0003 18_[+2]_54 chr2:174830143-174830223 0.0003 67_[+2]_5 chr8:144329064-144329144 0.0003 44_[+2]_28 chr17:7218669-7218749 0.0003 54_[+2]_18 chr7:157129630-157129710 0.0003 62_[+2]_10 chr12:69864109-69864189 0.00033 7_[+2]_65 chr10:35625331-35625411 0.00035 17_[+2]_55 chr1:169337259-169337339 0.00036 49_[+2]_23 chr9:35812269-35812349 0.00044 25_[+2]_47 chr17:61904501-61904581 0.00044 7_[+2]_65 chr20:18548009-18548089 0.00049 21_[+2]_51 chr3:49158239-49158319 0.00049 28_[+2]_44 chr12:123465169-12346524 0.00058 70_[+2]_2 chr11:1968514-1968594 0.00058 39_[+2]_33 chr1:19811988-19812068 0.00063 11_[+2]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCTTCCGG width=8 seqs=146 chr11:117014945-11701502 ( 15) ACTTCCGG 1 chr12:56320872-56320952 ( 38) ACTTCCGG 1 chr10:71930241-71930321 ( 48) ACTTCCGG 1 chr19:8070622-8070702 ( 34) ACTTCCGG 1 chr17:56595591-56595671 ( 56) ACTTCCGG 1 chr2:85839181-85839261 ( 34) ACTTCCGG 1 chr22:41215339-41215419 ( 52) ACTTCCGG 1 chrX:150565620-150565700 ( 39) ACTTCCGG 1 chr6:33257261-33257341 ( 69) ACTTCCGG 1 chr18:33552562-33552642 ( 68) ACTTCCGG 1 chr16:89307673-89307753 ( 5) ACTTCCGG 1 chr13:115000285-11500036 ( 46) ACTTCCGG 1 chr10:27443312-27443392 ( 38) ACTTCCGG 1 chr7:1543998-1544078 ( 46) ACTTCCGG 1 chr14:75348568-75348648 ( 28) ACTTCCGG 1 chr8:22526622-22526702 ( 1) ACTTCCGG 1 chr7:102988040-102988120 ( 26) ACTTCCGG 1 chr20:2644825-2644905 ( 70) ACTTCCGG 1 chr16:771122-771202 ( 24) ACTTCCGG 1 chr5:158690235-158690315 ( 63) ACTTCCGG 1 chr10:124713716-12471379 ( 73) ACTTCCGG 1 chr19:11039388-11039468 ( 9) ACTTCCGG 1 chr16:69166446-69166526 ( 59) ACTTCCGG 1 chr9:140118123-140118203 ( 12) ACTTCCGG 1 chr14:35761567-35761647 ( 37) ACTTCCGG 1 chr4:153701057-153701137 ( 55) ACTTCCGG 1 chr22:46431913-46431993 ( 42) ACTTCCGG 1 chr2:241075694-241075774 ( 33) ACTTCCGG 1 chr22:46731540-46731620 ( 62) ACTTCCGG 1 chr11:64085043-64085123 ( 14) ACTTCCGG 1 chr4:41937118-41937198 ( 36) ACTTCCGG 1 chr1:173837448-173837528 ( 46) ACTTCCGG 1 chr5:443219-443299 ( 72) ACTTCCGG 1 chr17:79849461-79849541 ( 31) ACTTCCGG 1 chrX:153775775-153775855 ( 33) ACTTCCGG 1 chr9:134406625-134406705 ( 35) ACTTCCGG 1 chr13:29233200-29233280 ( 22) ACTTCCGG 1 chr7:6676886-6676966 ( 63) ACTTCCGG 1 chr22:43010916-43010996 ( 24) ACTTCCGG 1 chr16:89787327-89787407 ( 68) ACTTCCGG 1 chr7:5553423-5553503 ( 12) ACTTCCGG 1 chr3:48956224-48956304 ( 45) ACTTCCGG 1 chr20:19997917-19997997 ( 64) ACTTCCGG 1 chr10:1102645-1102725 ( 8) ACTTCCGG 1 chr17:37844296-37844376 ( 24) ACTTCCGG 1 chr8:145582177-145582257 ( 47) ACTTCCGG 1 chr16:24740918-24740998 ( 54) ACTTCCGG 1 chr19:9938501-9938581 ( 48) GCTTCCGG 1 chr7:91875219-91875299 ( 16) GCTTCCGG 1 chr3:108308314-108308394 ( 17) GCTTCCGG 1 chr17:10600846-10600926 ( 17) ATTTCCGG 1 chr19:9879384-9879464 ( 55) GCTTCCGG 1 chr9:139294606-139294686 ( 26) GCTTCCGG 1 chr14:75179777-75179857 ( 29) GCTTCCGG 1 chr19:8942983-8943063 ( 11) GCTTCCGG 1 chr9:35749192-35749272 ( 46) GCTTCCGG 1 chr8:124780654-124780734 ( 31) ATTTCCGG 1 chr3:49203758-49203838 ( 36) GCTTCCGG 1 chr8:117778694-117778774 ( 53) ATTTCCGG 1 chr19:45542290-45542370 ( 24) GCTTCCGG 1 chr11:45939414-45939494 ( 27) GCTTCCGG 1 chr5:1345160-1345240 ( 26) GCTTCCGG 1 chr12:53574417-53574497 ( 57) GCTTCCGG 1 chr3:178865854-178865934 ( 46) GCTTCCGG 1 chr3:50264982-50265062 ( 59) GCTTCCGG 1 chr2:175260406-175260486 ( 65) GCTTCCGG 1 chr10:102747245-10274732 ( 20) GCTTCCGG 1 chr14:21852191-21852271 ( 26) GCTTCCGG 1 chr22:43485418-43485498 ( 72) ATTTCCGG 1 chr12:6602506-6602586 ( 19) GCTTCCGG 1 chr17:1945280-1945360 ( 27) GCTTCCGG 1 chr22:50639386-50639466 ( 34) GCTTCCGG 1 chr3:52740064-52740144 ( 46) GCTTCCGG 1 chr5:892893-892973 ( 71) GCTTCCGG 1 chr1:40506323-40506403 ( 27) ATTTCCGG 1 chr2:27294523-27294603 ( 45) GCTTCCGG 1 chr13:41345311-41345391 ( 40) GCTTCCGG 1 chr19:56116922-56117002 ( 30) GCTTCCGG 1 chr17:42264290-42264370 ( 54) GCTTCCGG 1 chr5:93954291-93954371 ( 45) GCTTCCGG 1 chr9:136223318-136223398 ( 31) GCTTCCGG 1 chr9:129622844-129622924 ( 55) GCTTCCGG 1 chr1:1209207-1209287 ( 40) GCTTCCGG 1 chr1:38273830-38273910 ( 65) GCTTCCGG 1 chr16:22019347-22019427 ( 37) GCTTCCGG 1 chr1:38325243-38325323 ( 44) ACTTCCGC 1 chr15:40675088-40675168 ( 26) ACTTCCGC 1 chr19:56110876-56110956 ( 31) ACTTCCGC 1 chr16:2059862-2059942 ( 19) ACTTCCGC 1 chr5:180237177-180237257 ( 29) ACTTCCGC 1 chr3:88199008-88199088 ( 51) ACTTCCGC 1 chr12:133287315-13328739 ( 42) ACTTCCGC 1 chr15:40331335-40331415 ( 60) ACTTCCGC 1 chr2:201753979-201754059 ( 39) ACTTCCGC 1 chr5:180288244-180288324 ( 63) ACTTCCGC 1 chr9:104296023-104296103 ( 17) ACTTCCGC 1 chr3:15469034-15469114 ( 3) ACTTCCGC 1 chr3:47844553-47844633 ( 26) ACTTCCGC 1 chr17:38975325-38975405 ( 58) ACTTCCGC 1 chr20:44993021-44993101 ( 73) ACTTCCGC 1 chr16:89284020-89284100 ( 65) TCTTCCGG 1 chr16:19729523-19729603 ( 54) TCTTCCGG 1 chr22:31556073-31556153 ( 47) TCTTCCGG 1 chr16:84220632-84220712 ( 16) TCTTCCGG 1 chr12:498740-498820 ( 35) TCTTCCGG 1 chr9:130700122-130700202 ( 34) TCTTCCGG 1 chr8:145980972-145981052 ( 54) TCTTCCGG 1 chr13:41837687-41837767 ( 45) TCTTCCGG 1 chr1:155178980-155179060 ( 38) GTTTCCGG 1 chr14:75593731-75593811 ( 56) GTTTCCGG 1 chr2:71357676-71357756 ( 62) GTTTCCGG 1 chr19:2950594-2950674 ( 69) GTTTCCGG 1 chr8:144373486-144373566 ( 73) GTTTCCGG 1 chr9:129567254-129567334 ( 39) GTTTCCGG 1 chr7:44084174-44084254 ( 65) GTTTCCGG 1 chr6:32143865-32143945 ( 29) GTTTCCGG 1 chr14:21458083-21458163 ( 56) GTTTCCGG 1 chr10:26986498-26986578 ( 62) GTTTCCGG 1 chr8:146052890-146052970 ( 55) GTTTCCGG 1 chr5:74062967-74063047 ( 20) ACTTCCGT 1 chr19:36236289-36236369 ( 42) ACTTCCGT 1 chr19:14800803-14800883 ( 28) ACTTCCGT 1 chr16:3162500-3162580 ( 58) ACTTCCTG 1 chr22:40742460-40742540 ( 52) GCTTCCGC 1 chr1:155112979-155113059 ( 61) GCTTCCGC 1 chr20:2489762-2489842 ( 40) GCTTCCGC 1 chr9:125693792-125693872 ( 68) ACTTCCAG 1 chr11:62495868-62495948 ( 45) ACTTCCAG 1 chr9:133454927-133455007 ( 38) TTTTCCGG 1 chr17:61627737-61627817 ( 53) GCTTCCGT 1 chr5:130506374-130506454 ( 59) ATTTCCGT 1 chr3:125314419-125314499 ( 19) CCTTCCGG 1 chr2:174830143-174830223 ( 68) GCTTCCTG 1 chr8:144329064-144329144 ( 45) ATTTCCTG 1 chr17:7218669-7218749 ( 55) CCTTCCGG 1 chr7:157129630-157129710 ( 63) ATTTCCTG 1 chr12:69864109-69864189 ( 8) AGTTCCGG 1 chr10:35625331-35625411 ( 18) GCTTCCAG 1 chr1:169337259-169337339 ( 50) ACTTACGG 1 chr9:35812269-35812349 ( 26) CTTTCCGG 1 chr17:61904501-61904581 ( 8) TTTTCCGC 1 chr20:18548009-18548089 ( 22) GGTTCCGG 1 chr3:49158239-49158319 ( 29) GGTTCCGG 1 chr12:123465169-12346524 ( 71) GCTTCCTC 1 chr11:1968514-1968594 ( 40) CCTTCCGC 1 chr1:19811988-19812068 ( 12) GCTTCCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.82012 E= 2.7e-165 171 -361 11 -122 -1383 131 -406 -8 -1383 -1383 -1383 265 -1383 -1383 -1383 265 -458 157 -1383 -1383 -1383 158 -1383 -1383 -258 -1383 145 -222 -1383 -115 125 -222 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 146 E= 2.7e-165 0.534247 0.027397 0.369863 0.068493 0.000000 0.828767 0.020548 0.150685 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.006849 0.993151 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.027397 0.000000 0.938356 0.034247 0.000000 0.150685 0.815068 0.034247 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCTTCCGG MEME-2 regular expression -------------------------------------------------------------------------------- [AG]CTTCCGG -------------------------------------------------------------------------------- Time 8.39 secs. ******************************************************************************** ******************************************************************************** MOTIF BMRCTTCC MEME-3 width = 8 sites = 57 llr = 419 E-value = 6.6e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 Description -------------------------------------------------------------------------------- Simplified A 225::::: pos.-specific C 35:8::aa probability G 315::::: matrix T 22:2aa:: bits 2.6 ** 2.4 ** 2.1 ** 1.9 ** Relative 1.6 **** Entropy 1.3 **** (10.6 bits) 1.1 ***** 0.8 ****** 0.5 ****** 0.3 ******* 0.0 -------- Multilevel GCGCTTCC consensus CAAT sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:9938501-9938581 66 4.03e-06 CCTCGAACTT TAACTTCC GCTTCCG chr11:45939414-45939494 59 4.03e-06 CTTGGTTGCT TAACTTCC GCGGGCCAGA chr3:125314419-125314499 39 1.22e-05 TAGCGTGAGC TCACTTCC CTCACAGCCG chr16:31128949-31129029 37 1.22e-05 GATTCTGGCG TCACTTCC CTTCCCGCGA chr19:56110876-56110956 6 1.22e-05 CAGCG TCACTTCC ACCCGGGGGG chr13:41837687-41837767 28 1.22e-05 GAGATCACGT TCACTTCC TGGTTCACTT chr2:175260406-175260486 41 3.09e-05 CAGCAAGGGG GAACTTCC GAGATCAAAG chr6:33257261-33257341 42 6.94e-05 TGTCAGAACT ACACTTCC CATCAAGGGT chr19:9879384-9879464 47 6.94e-05 GCGCCGGCTG GCACTTCC GCTTCCGGTT chr19:45542290-45542370 16 6.94e-05 GCGCGGCCTT TCATTTCC GCTTCCGGTG chr16:69166446-69166526 34 6.94e-05 CACTGCCTGC GCACTTCC GACTATGCGC chr7:5553423-5553503 33 6.94e-05 CCGCCTACAC GCACTTCC GTTCGTCCGC chr5:158690235-158690315 24 8.67e-05 TTCAAACCAC CCACTTCC GGTTTTTCAG chr9:104296023-104296103 62 8.67e-05 TGGGTTGAAG CCACTTCC TTTTTTCTTT chr12:54582794-54582874 63 8.67e-05 GTACCCGCAG CCACTTCC GCCGGAAATG chr19:47759716-47759796 38 1.09e-04 GTGACCCTCT TTATTTCC CTTCCTCACG chr10:124713716-12471379 32 1.41e-04 TCCAGTGCTT GAATTTCC GCCGGTACAG chr4:153701057-153701137 38 1.41e-04 AGGGACAACG CTACTTCC GGTCTCCTCA chr3:178865854-178865934 22 1.41e-04 CGCCTCAATT TCGCTTCC GCTTCTTTGC chr22:43485418-43485498 17 1.41e-04 gcgcTGCACT CTACTTCC AGGGCGGCGC chr19:44439428-44439508 31 1.57e-04 CTCTGGAACT ACATTTCC CAGCATCCCC chr8:117778694-117778774 28 1.74e-04 ACAGAGGCGT TTGCTTCC GTGGCCAAAG chr10:102747245-10274732 53 1.74e-04 TCCCGGAGTT TTGCTTCC GAGGTCAAGG chr7:91875219-91875299 61 2.11e-04 GGCGGTGAAA GAGCTTCC GGGTCGGCGG chr14:21458083-21458163 48 2.11e-04 ACAGGCACCT GTATTTCC GTTTCCGGTT chr17:37844296-37844376 16 2.11e-04 TAGGAGTATG AAGCTTCC ACTTCCGGAG chr2:85839181-85839261 12 2.95e-04 GCCCCTTGCT CAGCTTCC GGCCCCGCAT chr19:8942983-8943063 3 2.95e-04 CC GCGCTTCC GCTTCCGGTC chr20:524445-524525 44 2.95e-04 CGGGGCGAGA CAGCTTCC GACTCCGCCC chr3:49203758-49203838 28 2.95e-04 GAAGTGCACT GCGCTTCC GCTTCCGGGA chr22:46731540-46731620 16 2.95e-04 TAAGCTGCCG CAGCTTCC GGCCGGGCCA chr12:123465169-12346524 12 2.95e-04 CAGCGGCGCC GCGCTTCC CAGCCGGCCA chr10:26986498-26986578 46 2.95e-04 CCTGGCCGAA GCGCTTCC TGTGCCAGGT chr8:145582177-145582257 31 2.95e-04 GCCCGCCGAC CAGCTTCC GGGGCGGGAC chr17:10600846-10600926 32 3.39e-04 CGGTAGCGTT CCGCTTCC TCCGGAAGTC chr2:241075694-241075774 49 3.39e-04 GGCCTCAGAG CCGCTTCC GGCGCGCGCC chr11:31391341-31391421 35 3.39e-04 GTCGGAACAG TGACTTCC GGCGGAAGAA chr1:38273830-38273910 33 3.39e-04 CCGCCCAGGC CCGCTTCC GGGAGGAAGT chr19:2950594-2950674 61 3.69e-04 TCACAGACGG ATGCTTCC GTTTCCGGTT chr5:443219-443299 25 3.69e-04 GCCCGGACCC GTGCTTCC GGCGCCGTTG chr17:1945280-1945360 4 3.69e-04 ATT GTGCTTCC GCTCGGGGAA chr14:75593731-75593811 71 3.99e-04 CGGCCTGGCT GAGTTTCC TC chr14:75179777-75179857 21 3.99e-04 TTTCCCCAAG GAGTTTCC GCTTCCGGGC chr8:144718104-144718184 60 3.99e-04 ACGGCGCAGG AAGTTTCC CAGGCGGGGC chr3:88199008-88199088 22 4.34e-04 TGAGGGCACT GCGTTTCC TGATTGACCT chr9:140149718-140149798 4 4.34e-04 GCG GCGTTTCC CGGGGGCCGG chr8:42396703-42396783 57 4.82e-04 CGCTCGGTAA CCGTTTCC CGCGCGCCCG chr9:140118123-140118203 32 4.82e-04 CCTGCGCAGT GGACTTCC GTCGCCGGCC chr15:40331335-40331415 72 4.82e-04 TTCCGCTACT AGACTTCC A chr3:52740064-52740144 38 4.82e-04 GGCCCGTCGG AGACTTCC GCTTCCGGGG chr18:39535000-39535080 21 4.82e-04 ACCAGATTAG CCGTTTCC CGTATACATT chr17:42264290-42264370 30 4.82e-04 CGCGGAGGCG GGACTTCC TGTCCCTGGT chr20:2644825-2644905 8 5.12e-04 TGCCGCC ATGTTTCC CGCAGGAAGT chr19:56116922-56117002 22 5.12e-04 GGAACGGGCG CGACTTCC GCTTCcgggc chr22:50639386-50639466 53 5.38e-04 CGGGGCAGGC TGGCTTCC GGCGGGAGCG chr13:31191943-31192023 28 8.46e-04 CTCACGTCTT CACCTTCC CCGCCACGCC chr12:6602506-6602586 2 8.46e-04 C ACCCTTCC CGCCTCAGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:9938501-9938581 4e-06 65_[+3]_7 chr11:45939414-45939494 4e-06 58_[+3]_14 chr3:125314419-125314499 1.2e-05 38_[+3]_34 chr16:31128949-31129029 1.2e-05 36_[+3]_36 chr19:56110876-56110956 1.2e-05 5_[+3]_67 chr13:41837687-41837767 1.2e-05 27_[+3]_45 chr2:175260406-175260486 3.1e-05 40_[+3]_32 chr6:33257261-33257341 6.9e-05 41_[+3]_31 chr19:9879384-9879464 6.9e-05 46_[+3]_26 chr19:45542290-45542370 6.9e-05 15_[+3]_57 chr16:69166446-69166526 6.9e-05 33_[+3]_39 chr7:5553423-5553503 6.9e-05 32_[+3]_40 chr5:158690235-158690315 8.7e-05 23_[+3]_49 chr9:104296023-104296103 8.7e-05 61_[+3]_11 chr12:54582794-54582874 8.7e-05 62_[+3]_10 chr19:47759716-47759796 0.00011 37_[+3]_35 chr10:124713716-12471379 0.00014 31_[+3]_41 chr4:153701057-153701137 0.00014 37_[+3]_35 chr3:178865854-178865934 0.00014 21_[+3]_51 chr22:43485418-43485498 0.00014 16_[+3]_56 chr19:44439428-44439508 0.00016 30_[+3]_42 chr8:117778694-117778774 0.00017 27_[+3]_45 chr10:102747245-10274732 0.00017 52_[+3]_20 chr7:91875219-91875299 0.00021 60_[+3]_12 chr14:21458083-21458163 0.00021 47_[+3]_25 chr17:37844296-37844376 0.00021 15_[+3]_57 chr2:85839181-85839261 0.0003 11_[+3]_61 chr19:8942983-8943063 0.0003 2_[+3]_70 chr20:524445-524525 0.0003 43_[+3]_29 chr3:49203758-49203838 0.0003 27_[+3]_45 chr22:46731540-46731620 0.0003 15_[+3]_57 chr12:123465169-12346524 0.0003 11_[+3]_61 chr10:26986498-26986578 0.0003 45_[+3]_27 chr8:145582177-145582257 0.0003 30_[+3]_42 chr17:10600846-10600926 0.00034 31_[+3]_41 chr2:241075694-241075774 0.00034 48_[+3]_24 chr11:31391341-31391421 0.00034 34_[+3]_38 chr1:38273830-38273910 0.00034 32_[+3]_40 chr19:2950594-2950674 0.00037 60_[+3]_12 chr5:443219-443299 0.00037 24_[+3]_48 chr17:1945280-1945360 0.00037 3_[+3]_69 chr14:75593731-75593811 0.0004 70_[+3]_2 chr14:75179777-75179857 0.0004 20_[+3]_52 chr8:144718104-144718184 0.0004 59_[+3]_13 chr3:88199008-88199088 0.00043 21_[+3]_51 chr9:140149718-140149798 0.00043 3_[+3]_69 chr8:42396703-42396783 0.00048 56_[+3]_16 chr9:140118123-140118203 0.00048 31_[+3]_41 chr15:40331335-40331415 0.00048 71_[+3]_1 chr3:52740064-52740144 0.00048 37_[+3]_35 chr18:39535000-39535080 0.00048 20_[+3]_52 chr17:42264290-42264370 0.00048 29_[+3]_43 chr20:2644825-2644905 0.00051 7_[+3]_65 chr19:56116922-56117002 0.00051 21_[+3]_51 chr22:50639386-50639466 0.00054 52_[+3]_20 chr13:31191943-31192023 0.00085 27_[+3]_45 chr12:6602506-6602586 0.00085 1_[+3]_71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BMRCTTCC width=8 seqs=57 chr19:9938501-9938581 ( 66) TAACTTCC 1 chr11:45939414-45939494 ( 59) TAACTTCC 1 chr3:125314419-125314499 ( 39) TCACTTCC 1 chr16:31128949-31129029 ( 37) TCACTTCC 1 chr19:56110876-56110956 ( 6) TCACTTCC 1 chr13:41837687-41837767 ( 28) TCACTTCC 1 chr2:175260406-175260486 ( 41) GAACTTCC 1 chr6:33257261-33257341 ( 42) ACACTTCC 1 chr19:9879384-9879464 ( 47) GCACTTCC 1 chr19:45542290-45542370 ( 16) TCATTTCC 1 chr16:69166446-69166526 ( 34) GCACTTCC 1 chr7:5553423-5553503 ( 33) GCACTTCC 1 chr5:158690235-158690315 ( 24) CCACTTCC 1 chr9:104296023-104296103 ( 62) CCACTTCC 1 chr12:54582794-54582874 ( 63) CCACTTCC 1 chr19:47759716-47759796 ( 38) TTATTTCC 1 chr10:124713716-12471379 ( 32) GAATTTCC 1 chr4:153701057-153701137 ( 38) CTACTTCC 1 chr3:178865854-178865934 ( 22) TCGCTTCC 1 chr22:43485418-43485498 ( 17) CTACTTCC 1 chr19:44439428-44439508 ( 31) ACATTTCC 1 chr8:117778694-117778774 ( 28) TTGCTTCC 1 chr10:102747245-10274732 ( 53) TTGCTTCC 1 chr7:91875219-91875299 ( 61) GAGCTTCC 1 chr14:21458083-21458163 ( 48) GTATTTCC 1 chr17:37844296-37844376 ( 16) AAGCTTCC 1 chr2:85839181-85839261 ( 12) CAGCTTCC 1 chr19:8942983-8943063 ( 3) GCGCTTCC 1 chr20:524445-524525 ( 44) CAGCTTCC 1 chr3:49203758-49203838 ( 28) GCGCTTCC 1 chr22:46731540-46731620 ( 16) CAGCTTCC 1 chr12:123465169-12346524 ( 12) GCGCTTCC 1 chr10:26986498-26986578 ( 46) GCGCTTCC 1 chr8:145582177-145582257 ( 31) CAGCTTCC 1 chr17:10600846-10600926 ( 32) CCGCTTCC 1 chr2:241075694-241075774 ( 49) CCGCTTCC 1 chr11:31391341-31391421 ( 35) TGACTTCC 1 chr1:38273830-38273910 ( 33) CCGCTTCC 1 chr19:2950594-2950674 ( 61) ATGCTTCC 1 chr5:443219-443299 ( 25) GTGCTTCC 1 chr17:1945280-1945360 ( 4) GTGCTTCC 1 chr14:75593731-75593811 ( 71) GAGTTTCC 1 chr14:75179777-75179857 ( 21) GAGTTTCC 1 chr8:144718104-144718184 ( 60) AAGTTTCC 1 chr3:88199008-88199088 ( 22) GCGTTTCC 1 chr9:140149718-140149798 ( 4) GCGTTTCC 1 chr8:42396703-42396783 ( 57) CCGTTTCC 1 chr9:140118123-140118203 ( 32) GGACTTCC 1 chr15:40331335-40331415 ( 72) AGACTTCC 1 chr3:52740064-52740144 ( 38) AGACTTCC 1 chr18:39535000-39535080 ( 21) CCGTTTCC 1 chr17:42264290-42264370 ( 30) GGACTTCC 1 chr20:2644825-2644905 ( 8) ATGTTTCC 1 chr19:56116922-56117002 ( 22) CGACTTCC 1 chr22:50639386-50639466 ( 53) TGGCTTCC 1 chr13:31191943-31192023 ( 28) CACCTTCC 1 chr12:6602506-6602586 ( 2) ACCCTTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.18256 E= 6.6e-001 -5 -25 -4 52 59 45 -148 14 153 -325 52 -1248 -1248 121 -1248 52 -1248 -1248 -1248 265 -1248 -1248 -1248 265 -1248 158 -1248 -1248 -1248 158 -1248 -1248 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 57 E= 6.6e-001 0.157895 0.280702 0.333333 0.228070 0.245614 0.456140 0.122807 0.175439 0.473684 0.035088 0.491228 0.000000 0.000000 0.771930 0.000000 0.228070 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BMRCTTCC MEME-3 regular expression -------------------------------------------------------------------------------- [GCT][CA][GA][CT]TTCC -------------------------------------------------------------------------------- Time 11.65 secs. ******************************************************************************** ******************************************************************************** MOTIF MAAWAAAR MEME-4 width = 8 sites = 14 llr = 141 E-value = 1.0e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 Description -------------------------------------------------------------------------------- Simplified A 49a478a6 pos.-specific C 6:::3::: probability G :::::2:4 matrix T :1:6:::: bits 2.6 * * 2.4 * * 2.1 ** * 1.9 ** * Relative 1.6 *** ** Entropy 1.3 ******* (14.5 bits) 1.1 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CAATAAAA consensus A ACG G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:2489762-2489842 3 1.03e-06 GC AAAAAAAA GACTACACTC chr11:57479826-57479906 52 2.06e-06 TGCTACAGTC CAATAAAA TGACTTAGGC chr8:141474813-141474893 17 6.32e-06 CACAAGGCTG AAAAAAAG AGGGGAGCGA chr17:76374677-76374757 21 8.48e-06 TCGCCTTTGT CAATAAAG TTCGCGCCCG chr16:77225006-77225086 3 8.48e-06 GC CAATAAAG CTCCGCAACC chr19:4182529-4182609 28 8.48e-06 CCCACGGGAA CAATAAAG TTTCCCTTGT chr14:45604948-45605028 10 9.55e-06 GAGTTTGTT AAAACAAA ACACCGGAAC chr4:113152669-113152749 24 9.55e-06 AAGGTCCAAC AAAACAAA CGTCCGCACG chr8:126575859-126575939 28 1.06e-05 ctctgcatgg aaATAGAA GAGACAGGAA chr19:16296113-16296193 48 1.49e-05 GTAGCTCAGC CAATCAAA GAGAAGCGAG chr11:62495868-62495948 71 2.04e-05 GGGGCGGGTC CAATAGAA AG chr16:31128949-31129029 6 2.31e-05 GGAGC CAAAAGAA CTGCGTGGCG chr7:100861256-100861336 51 2.68e-05 GGTTTTGCCC CTATAAAA CATGGCGAAA chr15:101874650-10187473 57 3.00e-05 GCAGGTGCAG AAAACAAG CCTGGTGAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:2489762-2489842 1e-06 2_[+4]_70 chr11:57479826-57479906 2.1e-06 51_[+4]_21 chr8:141474813-141474893 6.3e-06 16_[+4]_56 chr17:76374677-76374757 8.5e-06 20_[+4]_52 chr16:77225006-77225086 8.5e-06 2_[+4]_70 chr19:4182529-4182609 8.5e-06 27_[+4]_45 chr14:45604948-45605028 9.5e-06 9_[+4]_63 chr4:113152669-113152749 9.5e-06 23_[+4]_49 chr8:126575859-126575939 1.1e-05 27_[+4]_45 chr19:16296113-16296193 1.5e-05 47_[+4]_25 chr11:62495868-62495948 2e-05 70_[+4]_2 chr16:31128949-31129029 2.3e-05 5_[+4]_67 chr7:100861256-100861336 2.7e-05 50_[+4]_22 chr15:101874650-10187473 3e-05 56_[+4]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MAAWAAAR width=8 seqs=14 chr20:2489762-2489842 ( 3) AAAAAAAA 1 chr11:57479826-57479906 ( 52) CAATAAAA 1 chr8:141474813-141474893 ( 17) AAAAAAAG 1 chr17:76374677-76374757 ( 21) CAATAAAG 1 chr16:77225006-77225086 ( 3) CAATAAAG 1 chr19:4182529-4182609 ( 28) CAATAAAG 1 chr14:45604948-45605028 ( 10) AAAACAAA 1 chr4:113152669-113152749 ( 24) AAAACAAA 1 chr8:126575859-126575939 ( 28) AAATAGAA 1 chr19:16296113-16296193 ( 48) CAATCAAA 1 chr11:62495868-62495948 ( 71) CAATAGAA 1 chr16:31128949-31129029 ( 6) CAAAAGAA 1 chr7:100861256-100861336 ( 51) CTATAAAA 1 chr15:101874650-10187473 ( 57) AAAACAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.9532 E= 1.0e+001 139 77 -1045 -1045 250 -1045 -1045 -116 261 -1045 -1045 -1045 139 -1045 -1045 184 213 -23 -1045 -1045 226 -1045 -68 -1045 261 -1045 -1045 -1045 197 -1045 6 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 14 E= 1.0e+001 0.428571 0.571429 0.000000 0.000000 0.928571 0.000000 0.000000 0.071429 1.000000 0.000000 0.000000 0.000000 0.428571 0.000000 0.000000 0.571429 0.714286 0.285714 0.000000 0.000000 0.785714 0.000000 0.214286 0.000000 1.000000 0.000000 0.000000 0.000000 0.642857 0.000000 0.357143 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MAAWAAAR MEME-4 regular expression -------------------------------------------------------------------------------- [CA]AA[TA][AC][AG]A[AG] -------------------------------------------------------------------------------- Time 14.91 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTWTTYT MEME-5 width = 8 sites = 5 llr = 59 E-value = 3.0e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::42::: pos.-specific C ::2:::4: probability G :::::::: matrix T aa868a6a bits 2.6 ** * * 2.4 ** * * 2.1 ** * * 1.9 ** ** * Relative 1.6 ****** * Entropy 1.3 ******** (17.1 bits) 1.1 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTTTTTTT consensus CAA C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr14:21852191-21852271 52 4.08e-07 AGCgttaggt tttttttt tgtttgtttg chr1:169337259-169337339 18 8.30e-07 TGTACGGTAT TTTATTTT AAAGTAGAAA chr9:104296023-104296103 70 1.69e-06 AGCCACTTCC TTTTTTCT TTC chr17:37844296-37844376 55 2.99e-06 TCCTGTGTTC TTTATTCT ACTCTCCGCT chr15:40675088-40675168 49 9.66e-06 TACCGGAAGT TTCTATTT GAAACCCAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:21852191-21852271 4.1e-07 51_[+5]_21 chr1:169337259-169337339 8.3e-07 17_[+5]_55 chr9:104296023-104296103 1.7e-06 69_[+5]_3 chr17:37844296-37844376 3e-06 54_[+5]_18 chr15:40675088-40675168 9.7e-06 48_[+5]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTWTTYT width=8 seqs=5 chr14:21852191-21852271 ( 52) TTTTTTTT 1 chr1:169337259-169337339 ( 18) TTTATTTT 1 chr9:104296023-104296103 ( 70) TTTTTTCT 1 chr17:37844296-37844376 ( 55) TTTATTCT 1 chr15:40675088-40675168 ( 49) TTCTATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.7769 E= 3.0e+002 -897 -897 -897 265 -897 -897 -897 265 -897 -74 -897 232 129 -897 -897 191 29 -897 -897 232 -897 -897 -897 265 -897 26 -897 191 -897 -897 -897 265 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 5 E= 3.0e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.200000 0.000000 0.800000 0.400000 0.000000 0.000000 0.600000 0.200000 0.000000 0.000000 0.800000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTWTTYT MEME-5 regular expression -------------------------------------------------------------------------------- TT[TC][TA][TA]T[TC]T -------------------------------------------------------------------------------- Time 18.06 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:105629990-10563007 9.70e-02 26_[+1(1.93e-05)]_46 chr20:44993021-44993101 1.54e-05 23_[+1(1.93e-05)]_39_[+3(4.03e-06)]_\ 2 chr9:130548251-130548331 1.79e-01 49_[+1(1.93e-05)]_23 chr16:22019347-22019427 7.63e-03 36_[+2(6.48e-05)]_36 chr17:80009738-80009818 1.02e-01 7_[+1(6.91e-05)]_15_[+1(1.93e-05)]_\ 42 chr1:19811988-19812068 1.43e-02 15_[+3(8.67e-05)]_57 chr19:14800803-14800883 3.11e-04 25_[+3(8.67e-05)]_19_[+1(6.91e-05)]_\ 20 chr16:24740918-24740998 2.46e-05 51_[+3(1.22e-05)]_21 chr16:2771127-2771207 1.08e-01 80 chr6:28186702-28186782 4.50e-01 80 chr13:41837687-41837767 1.28e-03 27_[+3(1.22e-05)]_45 chr16:30538124-30538204 7.42e-02 10_[+1(2.87e-05)]_62 chr1:38273830-38273910 2.29e-03 34_[+2(6.48e-05)]_22_[+2(6.48e-05)]_\ 8 chr9:35732236-35732316 3.10e-01 80 chr8:144718104-144718184 1.51e-02 [+1(1.93e-05)]_47_[+1(2.87e-05)]_17 chr1:1209207-1209287 2.57e-03 39_[+2(6.48e-05)]_33 chr8:146052890-146052970 1.07e-03 11_[+1(1.93e-05)]_61 chr9:140149718-140149798 3.07e-02 80 chr8:145582177-145582257 3.71e-03 32_[+2(6.48e-05)]_6_[+2(1.82e-05)]_\ 26 chr17:37844296-37844376 3.68e-08 23_[+2(1.82e-05)]_5_[+1(1.93e-05)]_\ 10_[+5(2.99e-06)]_18 chr22:35887942-35888022 2.84e-01 80 chr8:143751361-143751441 1.90e-02 16_[+1(1.93e-05)]_56 chr9:138853271-138853351 2.11e-02 80 chr10:1102645-1102725 7.22e-03 7_[+2(1.82e-05)]_32_[+2(6.48e-05)]_\ 25 chr10:26986498-26986578 1.86e-03 80 chr7:39663101-39663181 9.30e-02 13_[+1(2.87e-05)]_35_[+1(1.93e-05)]_\ 16 chr17:38975325-38975405 7.06e-03 55_[+3(3.09e-05)]_17 chr8:144816215-144816295 2.58e-02 60_[+1(1.93e-05)]_12 chr20:2489762-2489842 5.76e-07 2_[+4(1.03e-06)]_41_[+2(6.48e-05)]_\ 21 chr12:69864109-69864189 8.45e-04 43_[+1(1.93e-05)]_29 chr4:1723005-1723085 1.83e-01 80 chr8:141474813-141474893 1.30e-03 16_[+4(6.32e-06)]_10_[+1(1.93e-05)]_\ 38 chr16:639289-639369 2.04e-02 80 chr9:129622844-129622924 1.25e-03 16_[+1(6.91e-05)]_30_[+2(6.48e-05)]_\ 18 chr8:145980972-145981052 2.30e-03 24_[+1(6.91e-05)]_48 chr20:19997917-19997997 4.63e-04 11_[+1(6.91e-05)]_44_[+2(1.82e-05)]_\ 9 chr14:23938859-23938939 5.94e-03 27_[+1(2.87e-05)]_45 chr8:144349537-144349617 7.44e-02 34_[+1(1.93e-05)]_38 chr9:136223318-136223398 1.54e-02 30_[+2(6.48e-05)]_42 chr3:47844553-47844633 2.08e-02 25_[+2(8.25e-05)]_47 chr5:93954291-93954371 2.04e-04 44_[+2(6.48e-05)]_28 chr19:36236289-36236369 1.48e-03 39_[+3(1.22e-05)]_33 chr17:42264290-42264370 7.78e-04 53_[+2(6.48e-05)]_19 chr19:44439428-44439508 1.85e-02 80 chr16:89160227-89160307 4.66e-01 80 chr16:3156498-3156578 5.83e-02 41_[+1(1.93e-05)]_31 chr17:61904501-61904581 1.09e-01 80 chr12:54582794-54582874 1.68e-04 64_[+2(8.25e-05)]_8 chr3:48956224-48956304 3.41e-05 18_[+1(1.93e-05)]_18_[+2(1.82e-05)]_\ 28 chr14:21458083-21458163 6.69e-03 80 chr17:19281210-19281290 4.51e-02 25_[+1(1.93e-05)]_47 chr7:5553423-5553503 1.35e-03 9_[+3(1.22e-05)]_15_[+3(6.94e-05)]_\ 40 chr20:48532100-48532180 7.82e-01 80 chr16:89787327-89787407 5.84e-04 67_[+2(1.82e-05)]_5 chr19:56116922-56117002 3.21e-02 29_[+2(6.48e-05)]_43 chr7:157129630-157129710 2.50e-04 80 chr1:156698304-156698384 7.32e-01 80 chrX:19003064-19003144 2.22e-02 80 chr19:11616608-11616688 2.59e-02 38_[+1(1.93e-05)]_34 chr2:118845916-118845996 5.84e-02 4_[+1(6.91e-05)]_45_[+1(6.91e-05)]_\ 15 chr18:39535000-39535080 9.82e-02 80 chr13:41345311-41345391 7.10e-03 39_[+2(6.48e-05)]_33 chr2:27294523-27294603 4.94e-04 44_[+2(6.48e-05)]_28 chr3:15469034-15469114 6.94e-05 2_[+2(8.25e-05)]_7_[+1(1.93e-05)]_\ 12_[+1(1.93e-05)]_35 chr5:130506374-130506454 4.64e-05 17_[+1(1.93e-05)]_55 chr22:43010916-43010996 4.44e-03 23_[+2(1.82e-05)]_49 chr1:40506323-40506403 4.16e-05 26_[+2(6.48e-05)]_25_[+1(1.93e-05)]_\ 13 chr1:155112979-155113059 3.00e-04 33_[+1(1.93e-05)]_39 chr20:1373816-1373896 8.27e-02 21_[+1(6.91e-05)]_18_[+1(6.91e-05)]_\ 25 chr1:3663892-3663972 1.75e-01 51_[+1(6.91e-05)]_21 chr17:7218669-7218749 1.91e-01 80 chr16:1823141-1823221 5.00e-02 6_[+1(1.93e-05)]_44_[+1(6.91e-05)]_\ 14 chr9:104296023-104296103 6.47e-06 14_[+3(1.22e-05)]_39_[+3(8.67e-05)]_\ [+5(1.69e-06)]_3 chr9:35812269-35812349 1.65e-01 80 chr22:40742460-40742540 3.14e-03 80 chr12:123459240-12345932 9.12e-02 62_[+1(6.91e-05)]_10 chr16:3162500-3162580 6.71e-03 80 chr16:56485244-56485324 3.24e-02 11_[+1(1.93e-05)]_20_[+1(2.87e-05)]_\ 33 chr6:32143865-32143945 5.74e-04 43_[+1(2.87e-05)]_29 chr9:128469445-128469525 1.93e-02 63_[+1(1.93e-05)]_9 chr11:910781-910861 4.25e-02 51_[+1(1.93e-05)]_21 chr7:44084174-44084254 9.72e-03 80 chr11:71823691-71823771 4.53e-02 33_[+1(6.91e-05)]_39 chr11:1968514-1968594 1.10e-02 57_[+1(6.91e-05)]_15 chr5:892893-892973 5.21e-04 43_[+1(2.87e-05)]_19_[+2(6.48e-05)]_\ 2 chr3:52740064-52740144 3.95e-02 45_[+2(6.48e-05)]_27 chr22:50639386-50639466 2.08e-02 33_[+2(6.48e-05)]_13_[+2(6.48e-05)]_\ 18 chr7:6676886-6676966 7.24e-05 11_[+1(1.93e-05)]_43_[+2(1.82e-05)]_\ 10 chr13:29233200-29233280 8.93e-05 21_[+2(1.82e-05)]_51 chr17:1945280-1945360 2.25e-02 26_[+2(6.48e-05)]_46 chr7:100861256-100861336 1.51e-05 32_[+1(1.93e-05)]_10_[+4(2.68e-05)]_\ 22 chr11:31391341-31391421 1.72e-04 36_[+2(1.82e-05)]_36 chr9:134406625-134406705 1.40e-04 32_[+3(1.22e-05)]_40 chr15:64648389-64648469 6.52e-01 80 chr12:6602506-6602586 3.80e-04 18_[+2(6.48e-05)]_8_[+1(1.93e-05)]_\ 38 chrX:153775775-153775855 4.09e-07 30_[+3(1.61e-05)]_19_[+1(6.91e-05)]_\ 15 chr16:12070464-12070544 1.95e-01 80 chr22:43485418-43485498 4.48e-03 71_[+2(6.48e-05)]_1 chr6:41040220-41040300 8.15e-02 80 chr14:21852191-21852271 6.67e-06 25_[+2(6.48e-05)]_17_[+5(4.08e-07)]_\ 11_[+5(1.92e-05)]_3 chr9:129567254-129567334 1.02e-02 80 chr17:79849461-79849541 1.59e-03 28_[+3(1.22e-05)]_44 chr9:130700122-130700202 1.98e-02 80 chr5:180288244-180288324 1.36e-04 60_[+3(6.94e-05)]_12 chr10:102747245-10274732 8.81e-04 19_[+2(6.48e-05)]_53 chr16:81779934-81780014 1.10e-02 80 chr5:443219-443299 1.52e-04 26_[+2(6.48e-05)]_8_[+1(6.91e-05)]_\ 21_[+2(1.82e-05)]_1 chr8:144373486-144373566 9.61e-04 32_[+1(1.93e-05)]_40 chr8:144329064-144329144 3.67e-03 80 chr2:201753979-201754059 1.78e-04 38_[+2(8.25e-05)]_34 chr12:123465169-12346524 3.76e-03 50_[+1(6.91e-05)]_22 chr12:48551251-48551331 2.31e-02 39_[+1(6.91e-05)]_33 chr19:4182529-4182609 4.12e-06 27_[+4(8.48e-06)]_24_[+1(6.91e-05)]_\ 13 chr1:173837448-173837528 1.18e-04 43_[+3(1.22e-05)]_29 chr22:29949723-29949803 5.71e-02 15_[+1(1.93e-05)]_17_[+1(6.91e-05)]_\ 12_[+1(6.91e-05)]_12 chr1:36023012-36023092 5.45e-02 80 chr15:40331335-40331415 6.70e-04 32_[+1(1.93e-05)]_19_[+2(8.25e-05)]_\ 13 chr2:175260406-175260486 2.54e-05 40_[+3(3.09e-05)]_16_[+2(6.48e-05)]_\ 8 chr4:41937118-41937198 1.56e-05 35_[+2(1.82e-05)]_37 chr9:133454927-133455007 3.36e-05 16_[+1(1.93e-05)]_56 chr19:44716613-44716693 2.08e-01 80 chr12:133287315-13328739 2.13e-03 41_[+2(8.25e-05)]_9_[+1(6.91e-05)]_\ 14 chr9:140317621-140317701 1.50e-01 80 chr22:27068777-27068857 8.29e-03 16_[+1(2.87e-05)]_56 chr11:64085043-64085123 2.36e-06 11_[+3(1.22e-05)]_39_[+1(1.93e-05)]_\ 14 chr11:62495868-62495948 2.33e-05 70_[+4(2.04e-05)]_2 chr22:46731540-46731620 5.26e-03 17_[+2(6.48e-05)]_36_[+2(1.82e-05)]_\ 11 chr9:125693792-125693872 6.42e-04 65_[+3(6.94e-05)]_7 chr3:88199008-88199088 2.79e-03 48_[+3(1.61e-05)]_24 chr3:50264982-50265062 5.15e-04 58_[+2(6.48e-05)]_14 chr19:6393184-6393264 4.90e-02 32_[+1(6.91e-05)]_40 chr20:60962054-60962134 2.05e-01 41_[+1(6.91e-05)]_31 chr4:113152669-113152749 7.93e-03 23_[+4(9.55e-06)]_49 chr2:241075694-241075774 4.96e-04 30_[+3(1.22e-05)]_12_[+2(6.48e-05)]_\ 22 chr11:123612341-12361242 2.08e-01 48_[+1(6.91e-05)]_24 chr1:150039760-150039840 2.48e-02 38_[+1(6.91e-05)]_34 chr14:35452073-35452153 1.87e-02 61_[+1(6.91e-05)]_11 chr12:498740-498820 2.17e-02 80 chr16:77225006-77225086 2.27e-05 2_[+4(8.48e-06)]_8_[+1(1.93e-05)]_\ 21_[+1(1.93e-05)]_25 chr22:46431913-46431993 1.36e-03 41_[+2(1.82e-05)]_31 chr3:178865854-178865934 2.21e-03 45_[+2(6.48e-05)]_27 chr16:84220632-84220712 3.79e-03 29_[+1(1.93e-05)]_14_[+1(2.87e-05)]_\ 21 chr11:6502583-6502663 6.29e-01 80 chr12:53574417-53574497 4.17e-04 5_[+1(1.93e-05)]_43_[+2(6.48e-05)]_\ 16 chr13:114103635-11410371 5.61e-01 80 chr4:153701057-153701137 2.49e-04 39_[+2(1.82e-05)]_5_[+3(1.22e-05)]_\ 20 chr14:35761567-35761647 4.79e-05 18_[+1(6.91e-05)]_10_[+2(1.82e-05)]_\ 36 chr3:49158239-49158319 2.83e-01 80 chr12:112037311-11203739 5.86e-02 66_[+1(1.93e-05)]_6 chr5:180237177-180237257 1.80e-04 28_[+2(8.25e-05)]_7_[+1(1.93e-05)]_\ 29 chr16:2059862-2059942 2.16e-02 18_[+2(8.25e-05)]_54 chr5:1345160-1345240 5.14e-04 25_[+2(6.48e-05)]_13_[+1(1.93e-05)]_\ 26 chr9:140118123-140118203 1.27e-03 11_[+2(1.82e-05)]_61 chr16:69166446-69166526 5.87e-03 33_[+3(6.94e-05)]_17_[+2(1.82e-05)]_\ 14 chr2:233415318-233415398 2.35e-02 32_[+1(1.93e-05)]_40 chr19:2950594-2950674 3.32e-03 80 chr11:45939414-45939494 3.07e-04 26_[+2(6.48e-05)]_24_[+3(4.03e-06)]_\ 14 chr19:11039388-11039468 6.55e-04 8_[+2(1.82e-05)]_64 chr19:45542290-45542370 2.72e-04 13_[+5(5.11e-05)]_2_[+2(6.48e-05)]_\ 49 chr10:35625331-35625411 7.39e-02 80 chr8:42396703-42396783 1.49e-02 80 chr11:57479826-57479906 2.17e-04 51_[+4(2.06e-06)]_21 chr8:117778694-117778774 1.23e-05 52_[+2(6.48e-05)]_20 chr10:124713716-12471379 1.20e-05 72_[+2(1.82e-05)] chr3:49203758-49203838 3.00e-04 14_[+1(1.93e-05)]_13_[+2(6.48e-05)]_\ 37 chr15:101874650-10187473 7.40e-04 25_[+1(2.87e-05)]_23_[+4(3.00e-05)]_\ 16 chr20:524445-524525 3.02e-03 2_[+1(6.91e-05)]_70 chr12:9102550-9102630 1.13e-01 80 chr5:158690235-158690315 1.82e-04 25_[+2(1.82e-05)]_27_[+3(1.22e-05)]_\ 12 chr16:771122-771202 5.29e-03 23_[+2(1.82e-05)]_49 chr20:2644825-2644905 2.08e-04 17_[+1(2.87e-05)]_44_[+2(1.82e-05)]_\ 3 chr7:102988040-102988120 1.79e-06 23_[+3(1.61e-05)]_27_[+1(6.91e-05)]_\ 14 chr19:56110876-56110956 2.36e-03 5_[+3(1.22e-05)]_17_[+2(8.25e-05)]_\ 42 chr1:169337259-169337339 2.15e-05 17_[+5(8.30e-07)]_55 chr2:54014107-54014187 4.10e-01 80 chr15:40675088-40675168 1.42e-07 25_[+2(8.25e-05)]_7_[+1(1.93e-05)]_\ [+5(9.66e-06)]_24 chr8:22526622-22526702 8.82e-04 [+2(1.82e-05)]_14_[+1(2.87e-05)]_50 chr8:124780654-124780734 5.19e-04 30_[+2(6.48e-05)]_42 chr14:75348568-75348648 2.44e-03 27_[+2(1.82e-05)]_45 chr2:27994561-27994641 4.59e-02 16_[+1(6.91e-05)]_56 chr19:6280003-6280083 7.47e-01 80 chr7:1543998-1544078 5.54e-04 45_[+2(1.82e-05)]_27 chr2:71357676-71357756 4.55e-04 80 chr13:31191943-31192023 6.92e-03 8_[+1(1.93e-05)]_64 chr11:35684280-35684360 5.20e-01 80 chr10:27443312-27443392 2.13e-04 37_[+2(1.82e-05)]_35 chr13:46038949-46039029 3.22e-02 80 chr15:59981476-59981556 1.43e-01 80 chr22:31556073-31556153 2.67e-04 60_[+1(1.93e-05)]_12 chr13:115000285-11500036 4.16e-04 45_[+2(1.82e-05)]_27 chr19:46296040-46296120 8.41e-02 32_[+1(6.91e-05)]_40 chr19:4457800-4457880 7.58e-06 [+4(1.03e-06)]_[+4(1.03e-06)]_16_\ [+1(1.93e-05)]_40 chr10:64564240-64564320 6.79e-03 80 chr11:64008361-64008441 3.31e-03 52_[+1(1.93e-05)]_20 chr9:35749192-35749272 2.60e-03 45_[+2(6.48e-05)]_27 chr16:31128949-31129029 1.30e-04 5_[+4(2.31e-05)]_23_[+3(1.22e-05)]_\ 36 chr19:56092279-56092359 7.28e-03 71_[+1(6.91e-05)]_1 chr20:5093713-5093793 7.68e-03 12_[+1(1.93e-05)]_36_[+1(6.91e-05)]_\ 16 chr19:8942983-8943063 2.96e-02 10_[+2(6.48e-05)]_62 chr19:40791281-40791361 1.74e-02 58_[+1(2.87e-05)]_14 chr5:114598550-114598630 1.99e-02 4_[+1(6.91e-05)]_68 chr1:213224544-213224624 8.97e-02 21_[+1(6.91e-05)]_12_[+1(6.91e-05)]_\ 31 chr20:18548009-18548089 3.79e-03 55_[+1(1.93e-05)]_17 chr16:67226016-67226096 1.81e-01 80 chr14:75179777-75179857 3.43e-04 28_[+2(6.48e-05)]_11_[+1(6.91e-05)]_\ 25 chr17:61627737-61627817 3.92e-02 80 chr9:139294606-139294686 5.33e-05 25_[+2(6.48e-05)]_26_[+1(1.93e-05)]_\ 13 chr19:9879384-9879464 9.25e-03 46_[+3(6.94e-05)]_[+2(6.48e-05)]_18 chr16:19729523-19729603 5.05e-04 6_[+1(1.93e-05)]_66 chr16:2587874-2587954 3.91e-01 80 chr16:89307673-89307753 3.66e-03 4_[+2(1.82e-05)]_68 chr16:718045-718125 2.10e-01 27_[+1(1.93e-05)]_24_[+1(1.93e-05)]_\ 13 chr20:34287247-34287327 4.65e-02 19_[+1(1.93e-05)]_13_[+1(6.91e-05)]_\ 32 chr2:174830143-174830223 3.38e-02 80 chr19:16296113-16296193 3.74e-02 47_[+4(1.49e-05)]_25 chr17:10600846-10600926 2.76e-04 16_[+2(6.48e-05)]_16_[+1(1.93e-05)]_\ 32 chr16:31085542-31085622 6.84e-02 5_[+1(1.93e-05)]_67 chr18:33552562-33552642 3.71e-04 17_[+1(6.91e-05)]_42_[+2(1.82e-05)]_\ 5 chr16:75600208-75600288 1.13e-01 6_[+1(6.91e-05)]_32_[+1(1.93e-05)]_\ 26 chr14:75593731-75593811 1.31e-03 80 chr17:76374677-76374757 2.92e-03 20_[+4(8.48e-06)]_52 chr6:33257261-33257341 6.94e-06 41_[+3(6.94e-05)]_19_[+2(1.82e-05)]_\ 4 chr3:108308314-108308394 2.12e-04 16_[+2(6.48e-05)]_13_[+1(1.93e-05)]_\ 35 chr10:15902517-15902597 2.66e-03 41_[+1(1.93e-05)]_7_[+1(1.93e-05)]_\ 16 chrX:150565620-150565700 6.24e-03 19_[+2(1.82e-05)]_11_[+2(1.82e-05)]_\ 11_[+2(1.82e-05)]_15 chr3:13493338-13493418 7.11e-03 37_[+1(1.93e-05)]_23_[+1(1.93e-05)]_\ 4 chr22:41215339-41215419 7.70e-04 51_[+2(1.82e-05)]_21 chr16:619905-619985 4.60e-01 80 chr2:85839181-85839261 1.16e-02 13_[+2(6.48e-05)]_12_[+2(1.82e-05)]_\ 39 chr18:22006536-22006616 4.57e-02 35_[+1(6.91e-05)]_37 chr14:69658187-69658267 3.08e-02 80 chr21:45432157-45432237 1.95e-01 42_[+1(1.93e-05)]_30 chr17:56595591-56595671 7.86e-04 55_[+2(1.82e-05)]_17 chr20:18268856-18268936 1.91e-02 80 chr10:135122352-13512243 6.26e-02 80 chr1:38325243-38325323 1.62e-04 41_[+3(1.22e-05)]_31 chr19:47759716-47759796 2.02e-05 21_[+1(1.93e-05)]_7_[+5(4.43e-05)]_\ 20_[+1(2.87e-05)]_8 chr19:8070622-8070702 9.09e-03 33_[+2(1.82e-05)]_39 chr16:89284020-89284100 4.02e-03 80 chr1:155178980-155179060 6.57e-04 80 chr10:71930241-71930321 2.71e-03 47_[+2(1.82e-05)]_25 chr7:91875219-91875299 2.69e-03 15_[+2(6.48e-05)]_39_[+2(6.48e-05)]_\ 10 chr8:126575859-126575939 1.14e-03 27_[+4(1.06e-05)]_4_[+1(2.87e-05)]_\ 33 chr5:74062967-74063047 1.53e-04 17_[+3(6.94e-05)]_55 chr14:45604948-45605028 4.51e-03 9_[+4(9.55e-06)]_63 chr3:125314419-125314499 5.20e-03 38_[+3(1.22e-05)]_34 chr12:56320872-56320952 1.09e-03 37_[+2(1.82e-05)]_35 chr19:1885469-1885549 7.58e-02 41_[+1(1.93e-05)]_31 chr11:117014945-11701502 1.12e-04 14_[+2(1.82e-05)]_27_[+1(1.93e-05)]_\ 23 chr19:9938501-9938581 5.13e-05 47_[+2(6.48e-05)]_10_[+3(4.03e-06)]_\ 7 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n06.farnam.hpc.yale.internal ********************************************************************************