******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ESRRA.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr21:36956282-36956362 1.0000 80 chr22:30122885-30122965 1.0000 80 chr16:22692238-22692318 1.0000 80 chr5:172337909-172337989 1.0000 80 chr1:102900173-102900253 1.0000 80 chr2:220405977-220406057 1.0000 80 chr9:35193913-35193993 1.0000 80 chr9:95748625-95748705 1.0000 80 chr12:102942483-10294256 1.0000 80 chr19:45439229-45439309 1.0000 80 chr2:63528149-63528229 1.0000 80 chr16:48417897-48417977 1.0000 80 chr7:29838185-29838265 1.0000 80 chr12:56696251-56696331 1.0000 80 chr10:72997226-72997306 1.0000 80 chr1:120923095-120923175 1.0000 80 chr7:73768511-73768591 1.0000 80 chr3:72382091-72382171 1.0000 80 chr2:20335532-20335612 1.0000 80 chr1:220543011-220543091 1.0000 80 chr20:48328791-48328871 1.0000 80 chr11:65836616-65836696 1.0000 80 chr20:36021044-36021124 1.0000 80 chrX:53406076-53406156 1.0000 80 chr3:193048760-193048840 1.0000 80 chr17:77895375-77895455 1.0000 80 chr19:42924270-42924350 1.0000 80 chr19:52846968-52847048 1.0000 80 chr20:32889549-32889629 1.0000 80 chr11:12155604-12155684 1.0000 80 chr6:33821649-33821729 1.0000 80 chr3:5226849-5226929 1.0000 80 chr19:46143360-46143440 1.0000 80 chr1:31627446-31627526 1.0000 80 chr4:1505825-1505905 1.0000 80 chr12:6561768-6561848 1.0000 80 chr14:77424584-77424664 1.0000 80 chr19:43809979-43810059 1.0000 80 chrX:37539317-37539397 1.0000 80 chr11:63913642-63913722 1.0000 80 chr6:34165623-34165703 1.0000 80 chr20:55850101-55850181 1.0000 80 chr1:95560562-95560642 1.0000 80 chr21:45279390-45279470 1.0000 80 chrX:26801787-26801867 1.0000 80 chr1:93459786-93459866 1.0000 80 chr11:57175563-57175643 1.0000 80 chr17:77023779-77023859 1.0000 80 chr6:154801393-154801473 1.0000 80 chr2:16938554-16938634 1.0000 80 chr7:104924637-104924717 1.0000 80 chr9:133327037-133327117 1.0000 80 chr10:81206632-81206712 1.0000 80 chr16:70234131-70234211 1.0000 80 chr10:30783174-30783254 1.0000 80 chr21:38422210-38422290 1.0000 80 chr1:2040779-2040859 1.0000 80 chr1:33221222-33221302 1.0000 80 chr12:52366357-52366437 1.0000 80 chr8:95772890-95772970 1.0000 80 chr7:76038238-76038318 1.0000 80 chr3:196753011-196753091 1.0000 80 chr11:12710916-12710996 1.0000 80 chr17:73575170-73575250 1.0000 80 chr11:66607968-66608048 1.0000 80 chr5:38383146-38383226 1.0000 80 chr16:29986621-29986701 1.0000 80 chr12:46121815-46121895 1.0000 80 chr9:99846853-99846933 1.0000 80 chr8:12006467-12006547 1.0000 80 chr12:104917268-10491734 1.0000 80 chr22:20253434-20253514 1.0000 80 chr12:46650311-46650391 1.0000 80 chr20:55623385-55623465 1.0000 80 chr17:62982206-62982286 1.0000 80 chr20:32297335-32297415 1.0000 80 chr2:96926322-96926402 1.0000 80 chr20:48760584-48760664 1.0000 80 chr6:165463016-165463096 1.0000 80 chr1:17799466-17799546 1.0000 80 chr3:128176350-128176430 1.0000 80 chr5:148426113-148426193 1.0000 80 chr12:98972732-98972812 1.0000 80 chr16:3704427-3704507 1.0000 80 chr3:183354513-183354593 1.0000 80 chr12:54343538-54343618 1.0000 80 chr1:224692442-224692522 1.0000 80 chr19:4078359-4078439 1.0000 80 chr1:23493960-23494040 1.0000 80 chr1:15742849-15742929 1.0000 80 chr17:34077839-34077919 1.0000 80 chr17:3821022-3821102 1.0000 80 chr4:123696398-123696478 1.0000 80 chr11:16034121-16034201 1.0000 80 chr17:79027222-79027302 1.0000 80 chr7:148272915-148272995 1.0000 80 chr10:51575271-51575351 1.0000 80 chr12:120554003-12055408 1.0000 80 chr22:44366070-44366150 1.0000 80 chr12:116796860-11679694 1.0000 80 chr15:51413415-51413495 1.0000 80 chr20:48842760-48842840 1.0000 80 chr15:31727615-31727695 1.0000 80 chr20:48693341-48693421 1.0000 80 chr8:95968324-95968404 1.0000 80 chr10:49497911-49497991 1.0000 80 chr11:86902162-86902242 1.0000 80 chr20:56039871-56039951 1.0000 80 chr2:27979889-27979969 1.0000 80 chr10:99167589-99167669 1.0000 80 chr15:93421859-93421939 1.0000 80 chr19:10655213-10655293 1.0000 80 chr19:45767070-45767150 1.0000 80 chr17:25871727-25871807 1.0000 80 chr16:85481002-85481082 1.0000 80 chr19:30137107-30137187 1.0000 80 chr5:171541021-171541101 1.0000 80 chr7:30199607-30199687 1.0000 80 chr6:36586851-36586931 1.0000 80 chr16:3959199-3959279 1.0000 80 chr12:117484793-11748487 1.0000 80 chr5:126852977-126853057 1.0000 80 chrX:124573226-124573306 1.0000 80 chr3:42043461-42043541 1.0000 80 chr1:28269700-28269780 1.0000 80 chr20:52239123-52239203 1.0000 80 chr10:13157928-13158008 1.0000 80 chr22:42253722-42253802 1.0000 80 chr1:25279216-25279296 1.0000 80 chr7:154813486-154813566 1.0000 80 chr2:38861952-38862032 1.0000 80 chr2:47500448-47500528 1.0000 80 chr1:46987302-46987382 1.0000 80 chr18:44497932-44498012 1.0000 80 chr15:64385349-64385429 1.0000 80 chr19:4298779-4298859 1.0000 80 chr1:30161566-30161646 1.0000 80 chr19:17355614-17355694 1.0000 80 chr1:27483795-27483875 1.0000 80 chr12:114122580-11412266 1.0000 80 chr12:117443395-11744347 1.0000 80 chr1:33562872-33562952 1.0000 80 chr7:150103619-150103699 1.0000 80 chr14:70119738-70119818 1.0000 80 chr10:130913030-13091311 1.0000 80 chr14:61805350-61805430 1.0000 80 chr3:10067576-10067656 1.0000 80 chr2:65086608-65086688 1.0000 80 chr11:71144640-71144720 1.0000 80 chr11:44902643-44902723 1.0000 80 chr6:35455572-35455652 1.0000 80 chr4:99609754-99609834 1.0000 80 chr1:19908860-19908940 1.0000 80 chr1:167903189-167903269 1.0000 80 chr17:4110428-4110508 1.0000 80 chr5:171545143-171545223 1.0000 80 chr11:9780493-9780573 1.0000 80 chr1:43476795-43476875 1.0000 80 chr12:109548834-10954891 1.0000 80 chr5:138897983-138898063 1.0000 80 chr3:4548939-4549019 1.0000 80 chr16:70007001-70007081 1.0000 80 chr20:328604-328684 1.0000 80 chr2:217157717-217157797 1.0000 80 chr17:3892201-3892281 1.0000 80 chr6:44306421-44306501 1.0000 80 chr1:28284297-28284377 1.0000 80 chr11:33979017-33979097 1.0000 80 chr9:95871633-95871713 1.0000 80 chr6:42694446-42694526 1.0000 80 chr18:832291-832371 1.0000 80 chr4:166396074-166396154 1.0000 80 chr11:63299082-63299162 1.0000 80 chr11:64072280-64072360 1.0000 80 chr10:11954577-11954657 1.0000 80 chr19:46917807-46917887 1.0000 80 chr20:33292482-33292562 1.0000 80 chr2:43572077-43572157 1.0000 80 chr11:3425496-3425576 1.0000 80 chr2:169660786-169660866 1.0000 80 chr8:144360600-144360680 1.0000 80 chr10:120924970-12092505 1.0000 80 chr3:14294452-14294532 1.0000 80 chr7:105408692-105408772 1.0000 80 chr1:15573530-15573610 1.0000 80 chr12:93735366-93735446 1.0000 80 chr10:27847618-27847698 1.0000 80 chr17:1553266-1553346 1.0000 80 chr17:36500407-36500487 1.0000 80 chr20:33463720-33463800 1.0000 80 chr12:11989989-11990069 1.0000 80 chr3:49195693-49195773 1.0000 80 chr17:7370337-7370417 1.0000 80 chr1:165362404-165362484 1.0000 80 chr7:44835817-44835897 1.0000 80 chr10:121059172-12105925 1.0000 80 chr1:32879653-32879733 1.0000 80 chr5:149730197-149730277 1.0000 80 chr7:99750228-99750308 1.0000 80 chr1:38757899-38757979 1.0000 80 chr19:30302253-30302333 1.0000 80 chr9:130547123-130547203 1.0000 80 chr3:187397507-187397587 1.0000 80 chr1:155036940-155037020 1.0000 80 chrX:65146225-65146305 1.0000 80 chr15:70731652-70731732 1.0000 80 chr10:46046470-46046550 1.0000 80 chr5:49738-49818 1.0000 80 chr6:155981862-155981942 1.0000 80 chr2:118228069-118228149 1.0000 80 chr19:3434714-3434794 1.0000 80 chr14:79075899-79075979 1.0000 80 chr3:8744409-8744489 1.0000 80 chr4:52717971-52718051 1.0000 80 chr16:84641413-84641493 1.0000 80 chr12:122155067-12215514 1.0000 80 chr1:150480399-150480479 1.0000 80 chr12:111395122-11139520 1.0000 80 chr3:53290311-53290391 1.0000 80 chr21:44596914-44596994 1.0000 80 chr16:81550674-81550754 1.0000 80 chr7:101554808-101554888 1.0000 80 chr15:67189095-67189175 1.0000 80 chr10:71892620-71892700 1.0000 80 chr16:692329-692409 1.0000 80 chr11:57297815-57297895 1.0000 80 chr5:175970602-175970682 1.0000 80 chr3:49172014-49172094 1.0000 80 chr9:101096708-101096788 1.0000 80 chr3:50473675-50473755 1.0000 80 chr12:123867349-12386742 1.0000 80 chr22:39695912-39695992 1.0000 80 chr16:88182757-88182837 1.0000 80 chr10:133865765-13386584 1.0000 80 chr6:157207626-157207706 1.0000 80 chr10:73196291-73196371 1.0000 80 chr5:141071518-141071598 1.0000 80 chr7:101331562-101331642 1.0000 80 chr11:119223647-11922372 1.0000 80 chr6:164377783-164377863 1.0000 80 chr11:47433168-47433248 1.0000 80 chr10:108785617-10878569 1.0000 80 chr15:58838973-58839053 1.0000 80 chr14:71920889-71920969 1.0000 80 chr16:69206794-69206874 1.0000 80 chrX:41301719-41301799 1.0000 80 chr17:55749431-55749511 1.0000 80 chr21:46369794-46369874 1.0000 80 chr2:242089421-242089501 1.0000 80 chr17:79283136-79283216 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ESRRA/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ESRRA.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.248 C 0.251 G 0.264 T 0.237 Background letter frequencies (from file dataset with add-one prior applied): A 0.248 C 0.251 G 0.264 T 0.237 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CAAGGTCA MEME-1 width = 8 sites = 140 llr = 1195 E-value = 1.8e-163 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 18a::1:a pos.-specific C 7:::::9: probability G 21:aa1:: matrix T :::::8:: bits 2.1 1.9 *** * 1.7 *** ** 1.5 *** ** Relative 1.2 ******* Entropy 1.0 ******* (12.3 bits) 0.8 ******* 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAAGGTCA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:47433168-47433248 67 1.59e-05 agtcatctgc caaggtca ccagct chr11:119223647-11922372 50 1.59e-05 ggttcttgtt caaggtca cacaagagca chr5:141071518-141071598 46 1.59e-05 gttaatttgc caaggtca tacagccaTA chr22:39695912-39695992 61 1.59e-05 atcacttcct caaggtca cgcaggaagt chr3:50473675-50473755 67 1.59e-05 CAGACTCTGT CAAGGTCA TTACCA chr3:49172014-49172094 37 1.59e-05 TCTGCTTTCT CAAGGTCA GAGGGCCACT chr15:67189095-67189175 29 1.59e-05 ctttcaccct caaggtca ccttctaatc chr16:81550674-81550754 12 1.59e-05 AGACAGCCTT CAAGGTCA TCAGTGGAAA chr16:84641413-84641493 55 1.59e-05 CCGgagaaga caaggtca tgatcaaggg chr4:52717971-52718051 55 1.59e-05 ctccccttct caaggtca cacagcttat chr15:70731652-70731732 45 1.59e-05 atgtcctgcc caaggtca ctcagTCCTC chr3:187397507-187397587 18 1.59e-05 ACTTTCTTTG CAAGGTCA CCTTCTGGCC chr12:11989989-11990069 60 1.59e-05 TACGTGTTTT CAAGGTCA TTGGAGAGAG chr20:33463720-33463800 53 1.59e-05 AGCATGCCCT CAAGGTCA TGGGAGAAGT chr17:36500407-36500487 57 1.59e-05 gagactcacc caaggtca caaagcagct chr17:1553266-1553346 36 1.59e-05 TTTCCACCCC CAAGGTCA CAGGAAACAA chr12:93735366-93735446 46 1.59e-05 ggaggttaag caaggtca cacacaggca chr10:11954577-11954657 42 1.59e-05 aataactacc caaggtca taatggtagg chr17:3892201-3892281 25 1.59e-05 agatcacagg caaggtca caggcaagat chr20:328604-328684 8 1.59e-05 GCAGCGT CAAGGTCA CCTTCCCTCT chr11:9780493-9780573 50 1.59e-05 GCAGACCCAG CAAGGTCA TCTAGGGCGA chr5:171545143-171545223 57 1.59e-05 gccactcgct caaggtca tgcaggtggg chr1:167903189-167903269 54 1.59e-05 aatttagggt caaggtca cacagccaag chr1:19908860-19908940 28 1.59e-05 ACCAGTATTA CAAGGTCA AGGAGGTCGG chr6:35455572-35455652 40 1.59e-05 ctaaggctca caaggtca cgcagctgcc chr14:70119738-70119818 66 1.59e-05 gtgacttcct caaggtca GAGCTGT chr1:27483795-27483875 43 1.59e-05 gtgtctagct caaggtca catcacaagt chr2:38861952-38862032 61 1.59e-05 AAGAATCTGT CAAGGTCA CGCAGTACTT chr16:3959199-3959279 42 1.59e-05 TTGCCTCATT CAAGGTCA AGGTCAAGTT chr6:36586851-36586931 24 1.59e-05 gtgccttccc caaggtca tgcagataag chr2:27979889-27979969 53 1.59e-05 AAGACAAAGC CAAGGTCA ACAGAGCTGG chr20:48693341-48693421 23 1.59e-05 TCCTCTCTCC CAAGGTCA CCTTGGCCCG chr15:31727615-31727695 14 1.59e-05 GAGAGCTTGT CAAGGTCA CAGACCCACG chr20:48842760-48842840 40 1.59e-05 gtgacatgct caaggtca catggttaca chr15:51413415-51413495 37 1.59e-05 gtgactcacc caaggtca cagagggagg chr12:120554003-12055408 72 1.59e-05 gcaacttgcc caaggtca g chr10:51575271-51575351 14 1.59e-05 GCAAATGGTG CAAGGTCA TAGCCCTGAT chr7:148272915-148272995 45 1.59e-05 aaaaatggtt caaggtca caggggacat chr5:148426113-148426193 50 1.59e-05 gtaaattgtc caaggtca ccttcaggga chr6:165463016-165463096 13 1.59e-05 catggcatgt caaggtca ctctgccctt chr20:48760584-48760664 64 1.59e-05 AGGCCCTCAC CAAGGTCA AACAGTCAG chr2:96926322-96926402 21 1.59e-05 TGACTTTGCT CAAGGTCA CTGGTGAGTC chr20:32297335-32297415 62 1.59e-05 gtgaccttcc caaggtca cagagggact chr12:46650311-46650391 20 1.59e-05 cacgtggttg caaggtca agctcccaag chr22:20253434-20253514 40 1.59e-05 ctgtcacacc caaggtca caccgccagc chr8:12006467-12006547 63 1.59e-05 ttctgggact caaggtca tctagattat chr16:29986621-29986701 62 1.59e-05 agaggttgcc caaggtca cacagtggca chr17:73575170-73575250 66 1.59e-05 GAAGGttgtt caaggtca tagagcc chr3:196753011-196753091 56 1.59e-05 ggaggttGGC CAAGGTCA CAGAAGTCAT chr8:95772890-95772970 40 1.59e-05 CTTATCTGAG CAAGGTCA TTTGACACTA chr12:52366357-52366437 58 1.59e-05 ataccttgct caaggtca tgtggttaat chr1:33221222-33221302 45 1.59e-05 gggacttgtc caaggtca TTTGCCTGTG chr21:38422210-38422290 48 1.59e-05 actgacaatc caaggtca cgcctcaagg chr7:104924637-104924717 37 1.59e-05 gagtggtcat caaggtca tttgggcttg chr6:154801393-154801473 73 1.59e-05 gctaaatgct caaggtca chr17:77023779-77023859 37 1.59e-05 GGGTCCTTGT CAAGGTCA CGGCTGTGTG chr11:63913642-63913722 27 1.59e-05 GTGGCCTAGT CAAGGTCA CTGCACCCCC chrX:37539317-37539397 73 1.59e-05 CAGACAACCT CAAGGTCA chr14:77424584-77424664 69 1.59e-05 ggttaagtcc caaggtca cagg chr20:48328791-48328871 68 1.59e-05 gtaacctgcc caaggtca tacag chr7:29838185-29838265 38 1.59e-05 TTGCAAATAC CAAGGTCA CTGATGACTT chr16:48417897-48417977 73 1.59e-05 agtatctgcc caaggtca chr2:63528149-63528229 20 1.59e-05 catggcatgt caaggtca ctctgccctt chr1:102900173-102900253 5 1.59e-05 atgt caaggtca ctctgccctt chr22:30122885-30122965 45 1.59e-05 GAGGCTGGCC CAAGGTCA CAGGTTGGGT chr10:108785617-10878569 73 3.26e-05 AATGGTTGAA GAAGGTCA chr12:122155067-12215514 12 3.26e-05 CGTGACCGCA GAAGGTCA CTTACAGACA chr17:7370337-7370417 35 3.26e-05 AGGTCATGGT GAAGGTCA AGGGGTCATG chr10:27847618-27847698 57 3.26e-05 ACCCTGTGGT GAAGGTCA AGTTCAAAGA chr3:14294452-14294532 20 3.26e-05 CCCAGTGGGT GAAGGTCA GATAGCTGAG chr2:169660786-169660866 41 3.26e-05 CTAAAACTTT GAAGGTCA TCTGTATGGG chr11:71144640-71144720 33 3.26e-05 taggtcccct gaaggtca tacagctctt chr12:114122580-11412266 51 3.26e-05 ccaaggctca gaaggtca cacaaggctc chr19:17355614-17355694 41 3.26e-05 GAGGCCCAGG GAAGGTCA GCGCCAGGCC chr19:4298779-4298859 9 3.26e-05 gacctttg gaaggtca tgtcttgctg chr18:44497932-44498012 66 3.26e-05 AAGGGCACCT GAAGGTCA CGGACTG chr20:52239123-52239203 68 3.26e-05 atgaccttcc gaaggtca caaaa chr17:79027222-79027302 53 3.26e-05 cgaggctcag gaaggtca ttttcccaag chr11:16034121-16034201 48 3.26e-05 CTGTACTGAG GAAGGTCA CAAGGAGTTT chr4:123696398-123696478 48 3.26e-05 tactataggg gaaggtCA ACCTGGTGTT chr9:99846853-99846933 40 3.26e-05 gtccttcttt gaaggtca ttagatagca chrX:53406076-53406156 56 3.26e-05 ctgaggcaca gaaggtca aatgacttgc chr21:44596914-44596994 50 6.51e-05 CCTCAGCCTT AAAGGTCA CCTTCACTCT chr3:49195693-49195773 58 6.51e-05 GACAAAGGGC AAAGGTCA GGGTCATGAA chr3:53290311-53290391 69 8.28e-05 tgaggcttgg caagggca atca chr2:118228069-118228149 16 8.28e-05 gtctccagac caagggca gagagtgacc chrX:65146225-65146305 44 8.28e-05 catgtcgggg caagggca agaggacaac chr2:43572077-43572157 15 8.28e-05 AGAATAAGGA CAAGGGCA TAAATGAGAT chr16:70007001-70007081 48 8.28e-05 ctgaggctca caagggca tgccactcac chr1:30161566-30161646 48 8.28e-05 agccacctct caagggca caggGACATG chrX:124573226-124573306 22 8.28e-05 ctctccagac caagggca gagtgacctt chr16:70234131-70234211 51 8.28e-05 ctgaggctca caagggca tgccactcac chr2:16938554-16938634 27 8.28e-05 CATCAAGCTC CAAGGGCA TTCAAATGAC chrX:26801787-26801867 48 8.28e-05 ctctccagac caagggca gagtgacctt chr9:35193913-35193993 40 8.28e-05 ctttccagac caagggca gagtgacctt chr7:99750228-99750308 69 9.94e-05 GGGAGGTATT CAAGGACA AAGG chr19:46917807-46917887 56 9.94e-05 aactgaggcc caaggaca taaaaccaca chr2:47500448-47500528 1 9.94e-05 . CAAGGACA CACTCCCCAA chr10:30783174-30783254 20 9.94e-05 CTCAGAACCA CAAGGACA TGTGTTCCCC chr14:71920889-71920969 59 1.17e-04 aaaggttaaa ggaggtca cataattaga chr7:105408692-105408772 63 1.17e-04 aacagaggta ggaggtca tagcaaggtt chr9:95871633-95871713 34 1.17e-04 TCCAGGTCCT GGAGGTCA AGGCCCAGTG chr3:42043461-42043541 73 1.17e-04 gtagcaatgt ggaggtca chr1:31627446-31627526 32 1.17e-04 tgaggttcag ggaggtca aaggacccgt chr19:52846968-52847048 41 1.17e-04 TCGAGGCTTC GGAGGTCA CCTTGAAGGC chr7:73768511-73768591 32 1.17e-04 atggaggcca ggaggtca ttgttcaagg chr17:55749431-55749511 62 1.53e-04 GGGACATCTG CAAGGTGA CTTTGAGCTG chr11:3425496-3425576 42 1.53e-04 TGAGCCCTTT CAAGGTGA CTCTGAGGAC chr4:166396074-166396154 62 1.53e-04 tgcatgttaa gaagggca tggaagtgat chr2:20335532-20335612 58 1.53e-04 AATGACAGCT GAAGGGCA TTGCATAGCC chr3:10067576-10067656 31 1.67e-04 aggtaacggg taaggtca ccttgccagt chr16:88182757-88182837 47 2.01e-04 ACTTCTCCTT GAAGGACA GCAGCCAGGC chr1:38757899-38757979 71 2.01e-04 GTCCTCTACT GAAGGACA TC chr22:42253722-42253802 27 2.01e-04 GAAACCCCTT GAAGGACA TGATACCGTC chr19:45767070-45767150 68 2.01e-04 gggcctatta ccaggtca ttgtg chr6:33821649-33821729 21 2.01e-04 gtgaccttga ccaggtca gttaacctca chr2:242089421-242089501 38 2.18e-04 CGAGGCTCGC AGAGGTCA GGGATGCACG chr3:8744409-8744489 42 2.18e-04 cactcacGGG AGAGGTCA AAAAGATGTC chr10:46046470-46046550 61 2.18e-04 aaacactcag agaggtca agtgatccac chr11:63299082-63299162 11 2.18e-04 gagggcaaat agaggtca cttccatcac chr7:154813486-154813566 33 2.18e-04 gaggacgacc agaggtca ctcttgtggc chr1:25279216-25279296 2 2.18e-04 g agaggtca ctagcatcaa chr12:102942483-10294256 27 2.18e-04 ctgtaaatac agaggtca gcgtgacctt chr9:101096708-101096788 2 3.01e-04 g caaggtta tctcaggcca chr1:32879653-32879733 28 3.01e-04 tatggcatgt caatgtca ctctgtcctt chr3:183354513-183354593 14 3.01e-04 CCGCCCCCTT GAAGGTGA TCTGGAGGAC chr12:6561768-6561848 34 3.01e-04 AAATCACTTG GAAGGTGA CCTTGAAGGC chr11:57297815-57297895 55 4.86e-04 aggcctagcc caaggtcg cacaggacgt chr4:1505825-1505905 33 4.86e-04 GGGCCTCCAC CAGGGTCA CCTTGACCTC chr19:42924270-42924350 36 4.86e-04 tgaggcacag aaaggtga cataaccccc chr22:44366070-44366150 1 5.20e-04 . TGAGGTCA CCTTGGGCTG chr18:832291-832371 15 5.71e-04 ATGTGGAGGT GGAGGACA CGACCTTCAA chr12:117443395-11744347 11 5.71e-04 AAGATAAGAC ACAGGTCA GGGTGACCTT chr11:65836616-65836696 71 6.07e-04 GGGAAGTAGG CCAGGGCA GG chr10:130913030-13091311 37 6.38e-04 CCAAGACAGA TAAGGACA AGGAAGGCAc chr9:95748625-95748705 49 6.38e-04 atatgacctt gaaggtct tgatgcatgt chr21:46369794-46369874 59 7.88e-04 TCTGGCCAGC AGAGGGCA GCAGAGCTGT chr8:95968324-95968404 66 7.88e-04 tcagtggttc cgaggtta atgagat chr12:54343538-54343618 58 8.40e-04 GGTGGCCAGC GAAGGGGA GGGCTGCTTG chr11:57175563-57175643 67 9.58e-04 agcgagcatt caatgaca tgttca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:47433168-47433248 1.6e-05 66_[+1]_6 chr11:119223647-11922372 1.6e-05 49_[+1]_23 chr5:141071518-141071598 1.6e-05 45_[+1]_27 chr22:39695912-39695992 1.6e-05 60_[+1]_12 chr3:50473675-50473755 1.6e-05 66_[+1]_6 chr3:49172014-49172094 1.6e-05 36_[+1]_36 chr15:67189095-67189175 1.6e-05 28_[+1]_44 chr16:81550674-81550754 1.6e-05 11_[+1]_61 chr16:84641413-84641493 1.6e-05 54_[+1]_18 chr4:52717971-52718051 1.6e-05 54_[+1]_18 chr15:70731652-70731732 1.6e-05 44_[+1]_28 chr3:187397507-187397587 1.6e-05 17_[+1]_55 chr12:11989989-11990069 1.6e-05 59_[+1]_13 chr20:33463720-33463800 1.6e-05 52_[+1]_20 chr17:36500407-36500487 1.6e-05 56_[+1]_16 chr17:1553266-1553346 1.6e-05 35_[+1]_37 chr12:93735366-93735446 1.6e-05 45_[+1]_27 chr10:11954577-11954657 1.6e-05 41_[+1]_31 chr17:3892201-3892281 1.6e-05 24_[+1]_48 chr20:328604-328684 1.6e-05 7_[+1]_65 chr11:9780493-9780573 1.6e-05 49_[+1]_23 chr5:171545143-171545223 1.6e-05 56_[+1]_16 chr1:167903189-167903269 1.6e-05 53_[+1]_19 chr1:19908860-19908940 1.6e-05 27_[+1]_45 chr6:35455572-35455652 1.6e-05 39_[+1]_33 chr14:70119738-70119818 1.6e-05 65_[+1]_7 chr1:27483795-27483875 1.6e-05 42_[+1]_30 chr2:38861952-38862032 1.6e-05 60_[+1]_12 chr16:3959199-3959279 1.6e-05 41_[+1]_31 chr6:36586851-36586931 1.6e-05 23_[+1]_49 chr2:27979889-27979969 1.6e-05 52_[+1]_20 chr20:48693341-48693421 1.6e-05 22_[+1]_50 chr15:31727615-31727695 1.6e-05 13_[+1]_59 chr20:48842760-48842840 1.6e-05 39_[+1]_33 chr15:51413415-51413495 1.6e-05 36_[+1]_36 chr12:120554003-12055408 1.6e-05 71_[+1]_1 chr10:51575271-51575351 1.6e-05 13_[+1]_59 chr7:148272915-148272995 1.6e-05 44_[+1]_28 chr5:148426113-148426193 1.6e-05 49_[+1]_23 chr6:165463016-165463096 1.6e-05 12_[+1]_60 chr20:48760584-48760664 1.6e-05 63_[+1]_9 chr2:96926322-96926402 1.6e-05 20_[+1]_52 chr20:32297335-32297415 1.6e-05 61_[+1]_11 chr12:46650311-46650391 1.6e-05 19_[+1]_53 chr22:20253434-20253514 1.6e-05 39_[+1]_33 chr8:12006467-12006547 1.6e-05 62_[+1]_10 chr16:29986621-29986701 1.6e-05 61_[+1]_11 chr17:73575170-73575250 1.6e-05 65_[+1]_7 chr3:196753011-196753091 1.6e-05 55_[+1]_17 chr8:95772890-95772970 1.6e-05 39_[+1]_33 chr12:52366357-52366437 1.6e-05 57_[+1]_15 chr1:33221222-33221302 1.6e-05 44_[+1]_28 chr21:38422210-38422290 1.6e-05 47_[+1]_25 chr7:104924637-104924717 1.6e-05 36_[+1]_36 chr6:154801393-154801473 1.6e-05 72_[+1] chr17:77023779-77023859 1.6e-05 36_[+1]_36 chr11:63913642-63913722 1.6e-05 26_[+1]_46 chrX:37539317-37539397 1.6e-05 72_[+1] chr14:77424584-77424664 1.6e-05 68_[+1]_4 chr20:48328791-48328871 1.6e-05 67_[+1]_5 chr7:29838185-29838265 1.6e-05 37_[+1]_35 chr16:48417897-48417977 1.6e-05 72_[+1] chr2:63528149-63528229 1.6e-05 19_[+1]_53 chr1:102900173-102900253 1.6e-05 4_[+1]_68 chr22:30122885-30122965 1.6e-05 44_[+1]_28 chr10:108785617-10878569 3.3e-05 72_[+1] chr12:122155067-12215514 3.3e-05 11_[+1]_61 chr17:7370337-7370417 3.3e-05 34_[+1]_38 chr10:27847618-27847698 3.3e-05 56_[+1]_16 chr3:14294452-14294532 3.3e-05 19_[+1]_53 chr2:169660786-169660866 3.3e-05 40_[+1]_32 chr11:71144640-71144720 3.3e-05 32_[+1]_40 chr12:114122580-11412266 3.3e-05 50_[+1]_22 chr19:17355614-17355694 3.3e-05 40_[+1]_32 chr19:4298779-4298859 3.3e-05 8_[+1]_64 chr18:44497932-44498012 3.3e-05 65_[+1]_7 chr20:52239123-52239203 3.3e-05 67_[+1]_5 chr17:79027222-79027302 3.3e-05 52_[+1]_20 chr11:16034121-16034201 3.3e-05 47_[+1]_25 chr4:123696398-123696478 3.3e-05 47_[+1]_25 chr9:99846853-99846933 3.3e-05 39_[+1]_33 chrX:53406076-53406156 3.3e-05 55_[+1]_17 chr21:44596914-44596994 6.5e-05 49_[+1]_23 chr3:49195693-49195773 6.5e-05 57_[+1]_15 chr3:53290311-53290391 8.3e-05 68_[+1]_4 chr2:118228069-118228149 8.3e-05 15_[+1]_57 chrX:65146225-65146305 8.3e-05 43_[+1]_29 chr2:43572077-43572157 8.3e-05 14_[+1]_58 chr16:70007001-70007081 8.3e-05 47_[+1]_25 chr1:30161566-30161646 8.3e-05 47_[+1]_25 chrX:124573226-124573306 8.3e-05 21_[+1]_51 chr16:70234131-70234211 8.3e-05 50_[+1]_22 chr2:16938554-16938634 8.3e-05 26_[+1]_46 chrX:26801787-26801867 8.3e-05 47_[+1]_25 chr9:35193913-35193993 8.3e-05 39_[+1]_33 chr7:99750228-99750308 9.9e-05 68_[+1]_4 chr19:46917807-46917887 9.9e-05 55_[+1]_17 chr2:47500448-47500528 9.9e-05 [+1]_72 chr10:30783174-30783254 9.9e-05 19_[+1]_53 chr14:71920889-71920969 0.00012 58_[+1]_14 chr7:105408692-105408772 0.00012 62_[+1]_10 chr9:95871633-95871713 0.00012 33_[+1]_39 chr3:42043461-42043541 0.00012 72_[+1] chr1:31627446-31627526 0.00012 31_[+1]_41 chr19:52846968-52847048 0.00012 40_[+1]_32 chr7:73768511-73768591 0.00012 31_[+1]_41 chr17:55749431-55749511 0.00015 61_[+1]_11 chr11:3425496-3425576 0.00015 41_[+1]_31 chr4:166396074-166396154 0.00015 61_[+1]_11 chr2:20335532-20335612 0.00015 57_[+1]_15 chr3:10067576-10067656 0.00017 30_[+1]_42 chr16:88182757-88182837 0.0002 46_[+1]_26 chr1:38757899-38757979 0.0002 70_[+1]_2 chr22:42253722-42253802 0.0002 26_[+1]_46 chr19:45767070-45767150 0.0002 67_[+1]_5 chr6:33821649-33821729 0.0002 20_[+1]_52 chr2:242089421-242089501 0.00022 37_[+1]_35 chr3:8744409-8744489 0.00022 41_[+1]_31 chr10:46046470-46046550 0.00022 60_[+1]_12 chr11:63299082-63299162 0.00022 10_[+1]_62 chr7:154813486-154813566 0.00022 32_[+1]_40 chr1:25279216-25279296 0.00022 1_[+1]_71 chr12:102942483-10294256 0.00022 26_[+1]_46 chr9:101096708-101096788 0.0003 1_[+1]_71 chr1:32879653-32879733 0.0003 27_[+1]_45 chr3:183354513-183354593 0.0003 13_[+1]_59 chr12:6561768-6561848 0.0003 33_[+1]_39 chr11:57297815-57297895 0.00049 54_[+1]_18 chr4:1505825-1505905 0.00049 32_[+1]_40 chr19:42924270-42924350 0.00049 35_[+1]_37 chr22:44366070-44366150 0.00052 [+1]_72 chr18:832291-832371 0.00057 14_[+1]_58 chr12:117443395-11744347 0.00057 10_[+1]_62 chr11:65836616-65836696 0.00061 70_[+1]_2 chr10:130913030-13091311 0.00064 36_[+1]_36 chr9:95748625-95748705 0.00064 48_[+1]_24 chr21:46369794-46369874 0.00079 58_[+1]_14 chr8:95968324-95968404 0.00079 65_[+1]_7 chr12:54343538-54343618 0.00084 57_[+1]_15 chr11:57175563-57175643 0.00096 66_[+1]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAAGGTCA width=8 seqs=140 chr11:47433168-47433248 ( 67) CAAGGTCA 1 chr11:119223647-11922372 ( 50) CAAGGTCA 1 chr5:141071518-141071598 ( 46) CAAGGTCA 1 chr22:39695912-39695992 ( 61) CAAGGTCA 1 chr3:50473675-50473755 ( 67) CAAGGTCA 1 chr3:49172014-49172094 ( 37) CAAGGTCA 1 chr15:67189095-67189175 ( 29) CAAGGTCA 1 chr16:81550674-81550754 ( 12) CAAGGTCA 1 chr16:84641413-84641493 ( 55) CAAGGTCA 1 chr4:52717971-52718051 ( 55) CAAGGTCA 1 chr15:70731652-70731732 ( 45) CAAGGTCA 1 chr3:187397507-187397587 ( 18) CAAGGTCA 1 chr12:11989989-11990069 ( 60) CAAGGTCA 1 chr20:33463720-33463800 ( 53) CAAGGTCA 1 chr17:36500407-36500487 ( 57) CAAGGTCA 1 chr17:1553266-1553346 ( 36) CAAGGTCA 1 chr12:93735366-93735446 ( 46) CAAGGTCA 1 chr10:11954577-11954657 ( 42) CAAGGTCA 1 chr17:3892201-3892281 ( 25) CAAGGTCA 1 chr20:328604-328684 ( 8) CAAGGTCA 1 chr11:9780493-9780573 ( 50) CAAGGTCA 1 chr5:171545143-171545223 ( 57) CAAGGTCA 1 chr1:167903189-167903269 ( 54) CAAGGTCA 1 chr1:19908860-19908940 ( 28) CAAGGTCA 1 chr6:35455572-35455652 ( 40) CAAGGTCA 1 chr14:70119738-70119818 ( 66) CAAGGTCA 1 chr1:27483795-27483875 ( 43) CAAGGTCA 1 chr2:38861952-38862032 ( 61) CAAGGTCA 1 chr16:3959199-3959279 ( 42) CAAGGTCA 1 chr6:36586851-36586931 ( 24) CAAGGTCA 1 chr2:27979889-27979969 ( 53) CAAGGTCA 1 chr20:48693341-48693421 ( 23) CAAGGTCA 1 chr15:31727615-31727695 ( 14) CAAGGTCA 1 chr20:48842760-48842840 ( 40) CAAGGTCA 1 chr15:51413415-51413495 ( 37) CAAGGTCA 1 chr12:120554003-12055408 ( 72) CAAGGTCA 1 chr10:51575271-51575351 ( 14) CAAGGTCA 1 chr7:148272915-148272995 ( 45) CAAGGTCA 1 chr5:148426113-148426193 ( 50) CAAGGTCA 1 chr6:165463016-165463096 ( 13) CAAGGTCA 1 chr20:48760584-48760664 ( 64) CAAGGTCA 1 chr2:96926322-96926402 ( 21) CAAGGTCA 1 chr20:32297335-32297415 ( 62) CAAGGTCA 1 chr12:46650311-46650391 ( 20) CAAGGTCA 1 chr22:20253434-20253514 ( 40) CAAGGTCA 1 chr8:12006467-12006547 ( 63) CAAGGTCA 1 chr16:29986621-29986701 ( 62) CAAGGTCA 1 chr17:73575170-73575250 ( 66) CAAGGTCA 1 chr3:196753011-196753091 ( 56) CAAGGTCA 1 chr8:95772890-95772970 ( 40) CAAGGTCA 1 chr12:52366357-52366437 ( 58) CAAGGTCA 1 chr1:33221222-33221302 ( 45) CAAGGTCA 1 chr21:38422210-38422290 ( 48) CAAGGTCA 1 chr7:104924637-104924717 ( 37) CAAGGTCA 1 chr6:154801393-154801473 ( 73) CAAGGTCA 1 chr17:77023779-77023859 ( 37) CAAGGTCA 1 chr11:63913642-63913722 ( 27) CAAGGTCA 1 chrX:37539317-37539397 ( 73) CAAGGTCA 1 chr14:77424584-77424664 ( 69) CAAGGTCA 1 chr20:48328791-48328871 ( 68) CAAGGTCA 1 chr7:29838185-29838265 ( 38) CAAGGTCA 1 chr16:48417897-48417977 ( 73) CAAGGTCA 1 chr2:63528149-63528229 ( 20) CAAGGTCA 1 chr1:102900173-102900253 ( 5) CAAGGTCA 1 chr22:30122885-30122965 ( 45) CAAGGTCA 1 chr10:108785617-10878569 ( 73) GAAGGTCA 1 chr12:122155067-12215514 ( 12) GAAGGTCA 1 chr17:7370337-7370417 ( 35) GAAGGTCA 1 chr10:27847618-27847698 ( 57) GAAGGTCA 1 chr3:14294452-14294532 ( 20) GAAGGTCA 1 chr2:169660786-169660866 ( 41) GAAGGTCA 1 chr11:71144640-71144720 ( 33) GAAGGTCA 1 chr12:114122580-11412266 ( 51) GAAGGTCA 1 chr19:17355614-17355694 ( 41) GAAGGTCA 1 chr19:4298779-4298859 ( 9) GAAGGTCA 1 chr18:44497932-44498012 ( 66) GAAGGTCA 1 chr20:52239123-52239203 ( 68) GAAGGTCA 1 chr17:79027222-79027302 ( 53) GAAGGTCA 1 chr11:16034121-16034201 ( 48) GAAGGTCA 1 chr4:123696398-123696478 ( 48) GAAGGTCA 1 chr9:99846853-99846933 ( 40) GAAGGTCA 1 chrX:53406076-53406156 ( 56) GAAGGTCA 1 chr21:44596914-44596994 ( 50) AAAGGTCA 1 chr3:49195693-49195773 ( 58) AAAGGTCA 1 chr3:53290311-53290391 ( 69) CAAGGGCA 1 chr2:118228069-118228149 ( 16) CAAGGGCA 1 chrX:65146225-65146305 ( 44) CAAGGGCA 1 chr2:43572077-43572157 ( 15) CAAGGGCA 1 chr16:70007001-70007081 ( 48) CAAGGGCA 1 chr1:30161566-30161646 ( 48) CAAGGGCA 1 chrX:124573226-124573306 ( 22) CAAGGGCA 1 chr16:70234131-70234211 ( 51) CAAGGGCA 1 chr2:16938554-16938634 ( 27) CAAGGGCA 1 chrX:26801787-26801867 ( 48) CAAGGGCA 1 chr9:35193913-35193993 ( 40) CAAGGGCA 1 chr7:99750228-99750308 ( 69) CAAGGACA 1 chr19:46917807-46917887 ( 56) CAAGGACA 1 chr2:47500448-47500528 ( 1) CAAGGACA 1 chr10:30783174-30783254 ( 20) CAAGGACA 1 chr14:71920889-71920969 ( 59) GGAGGTCA 1 chr7:105408692-105408772 ( 63) GGAGGTCA 1 chr9:95871633-95871713 ( 34) GGAGGTCA 1 chr3:42043461-42043541 ( 73) GGAGGTCA 1 chr1:31627446-31627526 ( 32) GGAGGTCA 1 chr19:52846968-52847048 ( 41) GGAGGTCA 1 chr7:73768511-73768591 ( 32) GGAGGTCA 1 chr17:55749431-55749511 ( 62) CAAGGTGA 1 chr11:3425496-3425576 ( 42) CAAGGTGA 1 chr4:166396074-166396154 ( 62) GAAGGGCA 1 chr2:20335532-20335612 ( 58) GAAGGGCA 1 chr3:10067576-10067656 ( 31) TAAGGTCA 1 chr16:88182757-88182837 ( 47) GAAGGACA 1 chr1:38757899-38757979 ( 71) GAAGGACA 1 chr22:42253722-42253802 ( 27) GAAGGACA 1 chr19:45767070-45767150 ( 68) CCAGGTCA 1 chr6:33821649-33821729 ( 21) CCAGGTCA 1 chr2:242089421-242089501 ( 38) AGAGGTCA 1 chr3:8744409-8744489 ( 42) AGAGGTCA 1 chr10:46046470-46046550 ( 61) AGAGGTCA 1 chr11:63299082-63299162 ( 11) AGAGGTCA 1 chr7:154813486-154813566 ( 33) AGAGGTCA 1 chr1:25279216-25279296 ( 2) AGAGGTCA 1 chr12:102942483-10294256 ( 27) AGAGGTCA 1 chr9:101096708-101096788 ( 2) CAAGGTTA 1 chr1:32879653-32879733 ( 28) CAATGTCA 1 chr3:183354513-183354593 ( 14) GAAGGTGA 1 chr12:6561768-6561848 ( 34) GAAGGTGA 1 chr11:57297815-57297895 ( 55) CAAGGTCG 1 chr4:1505825-1505905 ( 33) CAGGGTCA 1 chr19:42924270-42924350 ( 36) AAAGGTGA 1 chr22:44366070-44366150 ( 1) TGAGGTCA 1 chr18:832291-832371 ( 15) GGAGGACA 1 chr12:117443395-11744347 ( 11) ACAGGTCA 1 chr11:65836616-65836696 ( 71) CCAGGGCA 1 chr10:130913030-13091311 ( 37) TAAGGACA 1 chr9:95748625-95748705 ( 49) GAAGGTCT 1 chr21:46369794-46369874 ( 59) AGAGGGCA 1 chr8:95968324-95968404 ( 66) CGAGGTTA 1 chr12:54343538-54343618 ( 58) GAAGGGGA 1 chr11:57175563-57175643 ( 67) CAATGACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.11846 E= 1.8e-163 -153 137 -12 -346 177 -313 -104 -1377 200 -1377 -521 -1377 -1377 -1377 190 -405 -1377 -1377 192 -1377 -179 -1377 -121 178 -1377 191 -262 -405 199 -1377 -521 -505 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 140 E= 1.8e-163 0.085714 0.650000 0.242857 0.021429 0.842857 0.028571 0.128571 0.000000 0.992857 0.000000 0.007143 0.000000 0.000000 0.000000 0.985714 0.014286 0.000000 0.000000 1.000000 0.000000 0.071429 0.000000 0.114286 0.814286 0.000000 0.942857 0.042857 0.014286 0.985714 0.000000 0.007143 0.007143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAAGGTCA MEME-1 regular expression -------------------------------------------------------------------------------- [CG]AAGGTCA -------------------------------------------------------------------------------- Time 4.85 secs. ******************************************************************************** ******************************************************************************** MOTIF TGACCTTG MEME-2 width = 8 sites = 126 llr = 1089 E-value = 1.8e-143 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::9::::: pos.-specific C ::1aa:11 probability G :9:::::7 matrix T a:1::a92 bits 2.1 * 1.9 * * * 1.7 * *** 1.5 ** **** Relative 1.2 ******* Entropy 1.0 ******* (12.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACCTTG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:133865765-13386584 54 1.45e-05 tgtcttcgtt tgaccttg agcttttccc chr12:123867349-12386742 21 1.45e-05 cattgctggg tgaccttg ggcagcgcgt chr7:101554808-101554888 17 1.45e-05 GCCTTGGCCT TGACCTTG GCCCTCCAGT chr12:111395122-11139520 4 1.45e-05 gcg tgaccttg agtgaattgg chr14:79075899-79075979 42 1.45e-05 actagctgca tgaccttg gttgaccttc chr2:118228069-118228149 72 1.45e-05 gggcagagag tgaccttg a chr6:155981862-155981942 2 1.45e-05 g tgaccttg agcaagtaat chr19:30302253-30302333 48 1.45e-05 ACAGGCGCGG TGACCTTG GGGATGTCCC chr5:149730197-149730277 23 1.45e-05 GGCACTCTGG TGACCTTG ACCTTTTGAG chr2:43572077-43572157 37 1.45e-05 TGAGATCTTT TGACCTTG GCTAGTGCCA chr11:64072280-64072360 70 1.45e-05 GTCACCGCAG TGACCTTG AGC chr4:166396074-166396154 34 1.45e-05 ccttcgaata tgaccttg aaggtcttgg chr6:42694446-42694526 1 1.45e-05 . TGACCTTG AGGTTGTAAA chr9:95871633-95871713 62 1.45e-05 GCCTGTCCAC TGACCTTG AGAACCACAC chr11:33979017-33979097 8 1.45e-05 agctatg tgaccttg aggaagacct chr3:4548939-4549019 44 1.45e-05 gaaatagttt tgaccttg aagtttccct chr1:43476795-43476875 4 1.45e-05 GTG TGACCTTG GGGAGGTTGT chr4:99609754-99609834 61 1.45e-05 tggggcagag tgaccttg gctgtctttc chr11:44902643-44902723 6 1.45e-05 gtgtg tgaccttg aacaagtaac chr2:65086608-65086688 8 1.45e-05 TTGGGTT TGACCTTG ACCCCTGGGC chr14:61805350-61805430 43 1.45e-05 GGTACAACTG TGACCTTG AAGTGACCTT chr10:130913030-13091311 69 1.45e-05 gccctctgtg tgaccttg agca chr7:150103619-150103699 24 1.45e-05 ccttgctctg tgaccttg gcaagtatgt chr12:117443395-11744347 22 1.45e-05 CAGGTCAGGG TGACCTTG TCGAAACACC chr15:64385349-64385429 33 1.45e-05 AGAGTGGCTG TGACCTTG GGCCAGTCCC chr18:44497932-44498012 48 1.45e-05 CGAGTTTTTC TGACCTTG AAGGGCACCT chr2:47500448-47500528 58 1.45e-05 ATGACCTTGA TGACCTTG TGAACACCCA chrX:124573226-124573306 33 1.45e-05 aagggcagag tgaccttg acatgccata chr12:117484793-11748487 19 1.45e-05 tcctactggg tgaccttg ggcccgtgac chr7:30199607-30199687 10 1.45e-05 gaggagtgt tgaccttg gacgcaggag chr10:99167589-99167669 30 1.45e-05 acttgctctg tgaccttg aacaactcac chr20:56039871-56039951 18 1.45e-05 AGCGAGCCAC TGACCTTG AGTGAGCTAT chr10:49497911-49497991 42 1.45e-05 TCTGTCAGAG TGACCTTG AGGACTACTT chr20:48693341-48693421 69 1.45e-05 ATCTAGCAGG TGACCTTG CCCA chr17:34077839-34077919 22 1.45e-05 accagccgca tgaccttg agctagaccc chr1:224692442-224692522 5 1.45e-05 tctg tgaccttg gggtaagtaa chr20:55623385-55623465 40 1.45e-05 gtcactgcga tgaccttg ctgtcaccct chr12:46121815-46121895 31 1.45e-05 TACTACCCTG TGACCTTG GGTTAGGCAG chr5:38383146-38383226 41 1.45e-05 CTGAAGTGGT TGACCTTG AGAGCAGCTC chr11:66607968-66608048 35 1.45e-05 AAATCTCCCG TGACCTTG AACTTCCTCC chr11:12710916-12710996 37 1.45e-05 cttatctgtt tgaccttg ggcaacctct chr1:2040779-2040859 46 1.45e-05 GGGTGACCct tgaccttg gtggcctcag chr10:30783174-30783254 51 1.45e-05 ACAGCAAGGA TGACCTTG GAGGAGGCTA chr9:133327037-133327117 2 1.45e-05 g tgaccttg agcctgccac chr1:93459786-93459866 26 1.45e-05 aatgccagcc tgaccttg agccctcaat chrX:26801787-26801867 59 1.45e-05 aagggcagag tgaccttg aaatgccatg chr21:45279390-45279470 30 1.45e-05 CCTGCTCTTG TGACCTTG ACTTTGACCT chr6:34165623-34165703 51 1.45e-05 GAAGGGGTGT TGACCTTG AATGTGCTGC chr19:46143360-46143440 38 1.45e-05 GTGCAGCTTT TGACCTTG GTCTTGCCCT chr6:33821649-33821729 12 1.45e-05 gctggctgtg tgaccttg accaggtcag chr17:77895375-77895455 3 1.45e-05 cg tgaccttg agcaggttcc chr20:36021044-36021124 7 1.45e-05 gctgtg tgaccttg agcaaagagg chr1:220543011-220543091 4 1.45e-05 gta tgaccttg gccaattaac chr1:120923095-120923175 65 1.45e-05 cctattcctt tgaccttg gctatttg chr12:56696251-56696331 31 1.45e-05 TAGGTTGTTG TGACCTTG GGAGGACCTC chr7:29838185-29838265 23 1.45e-05 CCTACTGCAC TGACCTTG CAAATACCAA chr12:102942483-10294256 38 1.45e-05 gaggtcagcg tgaccttg acaagaacag chr9:35193913-35193993 10 1.45e-05 tggtgctgt tgaccttg aaatgccatg chr5:172337909-172337989 2 1.45e-05 g tgaccttg gctagggtga chr16:22692238-22692318 21 1.45e-05 actagctgtg tgaccttg ggtgagttac chr21:36956282-36956362 18 1.45e-05 accttgactt tgaccttg cttaacctca chr17:79283136-79283216 11 2.75e-05 ACGGACAATG TGACCTTT GCAATGTCCC chrX:41301719-41301799 15 2.75e-05 CGCAAGGACG TGACCTTT ATGGGAAAAA chr6:44306421-44306501 71 2.75e-05 TTCTGCTGGG TGACCTTT CC chr2:38861952-38862032 9 2.75e-05 TCTGAGTT TGACCTTT CTCAAAGCAG chr15:58838973-58839053 57 4.13e-05 AATATCAGAG TGACCTTC ACACTCCGCA chr1:155036940-155037020 23 4.13e-05 gcaagtctcg tgaccttc ctaacctcat chr2:217157717-217157797 59 4.13e-05 ATTGGCAAGA TGACCTTC AAAGATCCTC chr20:52239123-52239203 59 4.13e-05 agagagacca tgaccttc cgaaggtcac chr20:32297335-32297415 53 4.13e-05 gagaggaaag tgaccttc ccaaggtcac chr12:104917268-10491734 57 4.13e-05 cctgattctg tgaccttc agcaagtcat chr7:76038238-76038318 10 4.13e-05 ctagctgta tgaccttc accttgcaaa chr2:16938554-16938634 41 4.13e-05 GGCATTCAAA TGACCTTC TGGAGGATGC chr19:43809979-43810059 53 4.13e-05 TGCCTGTGCG TGACCTTC AAACACCCTC chr11:12155604-12155684 18 4.13e-05 agttagttat tgaccttc atgagcctca chr3:193048760-193048840 23 4.13e-05 gctcactctg tgaccttc tctggcctca chr2:220405977-220406057 17 4.13e-05 tgagtctgtg tgaccttc agcatgcctc chr6:157207626-157207706 34 7.05e-05 ACCTCCAAAG TGTCCTTG CCTCTCTTGT chr1:32879653-32879733 39 7.05e-05 aatgtcactc tgtccttg gtctagagag chr2:169660786-169660866 22 7.05e-05 CAAGGACTCC TGTCCTTG TCTAAAACTT chr10:121059172-12105925 44 8.52e-05 GGGTTGAAGG TGCCCTTG ACCATATAGT chr6:165463016-165463096 24 8.52e-05 aaggtcactc tgcccttg ttccggagcg chr10:72997226-72997306 17 8.52e-05 actgaccatg tgcccttg gggtcacctc chr2:63528149-63528229 31 8.52e-05 aaggtcactc tgcccttg gtctagagag chr1:102900173-102900253 16 8.52e-05 aaggtcactc tgcccttg gtctagagag chr6:164377783-164377863 13 9.88e-05 TGAGCCATCT TAACCTTG AACCAGCTTT chr7:105408692-105408772 10 9.88e-05 ttctaataa taaccttg gtatataacc chr10:13157928-13158008 9 9.88e-05 TATGACCT TAACCTTG AGAAAGAGGG chr12:116796860-11679694 41 9.88e-05 CTGGTGTGGA TAACCTTG AACATAAAGA chr16:69206794-69206874 34 1.26e-04 gccgcaagag tgacctct ggtcgtcctc chr10:73196291-73196371 22 1.26e-04 aatcctagag tgacctct ctgagcctca chr1:150480399-150480479 65 1.26e-04 GGCTTCAGGG TGACTTTG GGAGGAGT chr17:7370337-7370417 51 1.26e-04 CAAGGGGTCA TGACCTCT GAAGTCACAG chr1:15573530-15573610 21 1.26e-04 gccatttctg tgacctct gagcctccgc chr1:28284297-28284377 30 1.26e-04 tttgatcttt tgacctct gtgcctcact chr16:85481002-85481082 14 1.26e-04 cttgggcaga tgacctct ctggactttg chr1:17799466-17799546 45 1.26e-04 gcgataagaa tgacctct ggtcgtcctc chr2:96926322-96926402 11 1.26e-04 CCCATGGAAC TGACTTTG CTCAAGGTCA chr17:62982206-62982286 39 1.26e-04 ACTTAGCTTG TGACCTCT ACGGAAATAC chr10:81206632-81206712 17 1.26e-04 tccagcggaa tgacctct gcatgacgcc chr7:104924637-104924717 71 1.26e-04 aaggtcagaa tgactttg cc chr4:1505825-1505905 44 1.26e-04 AGGGTCACCT TGACCTCT AGCTGACCTC chr1:46987302-46987382 30 1.40e-04 CCTCCTAGTG TCAccttg gggctcagta chr22:44366070-44366150 45 1.40e-04 TTCCCTGGGG TCACCTTG GGCTAGTGTG chr1:28269700-28269780 5 1.55e-04 atgt tgacctcc agaccttagt chr17:1553266-1553346 21 1.67e-04 GCCTGGGCTC TGTCCTTT CCACCCCCAA chr21:46369794-46369874 12 1.96e-04 GTGGAGGGCG CGACCTTG GCTTCCTGGC chr7:44835817-44835897 26 1.96e-04 GGACCCCAGT CGACCTTG ACTGGCGGCG chr12:109548834-10954891 23 1.96e-04 GTCCTTGGGC TGCCCTTT CCCTTGGCGC chr9:99846853-99846933 29 2.09e-04 agaaagccac tgtccttc tttgaaggtc chr8:95772890-95772970 10 2.09e-04 GACCTTTAT TGTCCTTC TCCTTCACTG chr20:32889549-32889629 11 2.35e-04 gaccttcaca taaccttt ctgggttcag chr11:9780493-9780573 11 2.65e-04 CTGACTCGTT TGACCCTG GCTGTCCCTG chr7:101331562-101331642 56 2.81e-04 GTTACAGCCT TGCCCTCG CCTCCTGCTC chr20:33292482-33292562 3 3.60e-04 TA TGACATTG AGACGTCACC chr21:44596914-44596994 12 3.88e-04 CTGGCCGCCG AGACCTTG GCCGCAGGAG chr5:175970602-175970682 5 4.03e-04 GGAg tgacttcg ttttctcgcc chr8:144360600-144360680 2 4.31e-04 g tcacctcg gagcctccgg chr18:832291-832371 23 4.72e-04 GTGGAGGACA CGACCTTC AACCTGTAGC chr1:38757899-38757979 60 5.12e-04 AGCCATATAA TGTCCTCT ACTGAAGGAC chr5:171541021-171541101 15 5.12e-04 tttatatcta tgaccctt taaggcaggg chr11:86902162-86902242 26 5.12e-04 ttcgtcctta tgtcctct agagtgagtg chr1:19908860-19908940 62 5.70e-04 TGGGCGCCAC TGCCCTCT GCTGGAGGGA chr1:15742849-15742929 67 5.70e-04 CGGGCAACCT TCTCCTTG GCTGAC chr9:95748625-95748705 30 5.70e-04 ctgactcccc tgcctttg aatatgacct chr19:45767070-45767150 10 6.53e-04 caagtcact taacctct ttgagcctct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:133865765-13386584 1.4e-05 53_[+2]_19 chr12:123867349-12386742 1.4e-05 20_[+2]_52 chr7:101554808-101554888 1.4e-05 16_[+2]_56 chr12:111395122-11139520 1.4e-05 3_[+2]_69 chr14:79075899-79075979 1.4e-05 41_[+2]_31 chr2:118228069-118228149 1.4e-05 71_[+2]_1 chr6:155981862-155981942 1.4e-05 1_[+2]_71 chr19:30302253-30302333 1.4e-05 47_[+2]_25 chr5:149730197-149730277 1.4e-05 22_[+2]_50 chr2:43572077-43572157 1.4e-05 36_[+2]_36 chr11:64072280-64072360 1.4e-05 69_[+2]_3 chr4:166396074-166396154 1.4e-05 33_[+2]_39 chr6:42694446-42694526 1.4e-05 [+2]_72 chr9:95871633-95871713 1.4e-05 61_[+2]_11 chr11:33979017-33979097 1.4e-05 7_[+2]_65 chr3:4548939-4549019 1.4e-05 43_[+2]_29 chr1:43476795-43476875 1.4e-05 3_[+2]_69 chr4:99609754-99609834 1.4e-05 60_[+2]_12 chr11:44902643-44902723 1.4e-05 5_[+2]_67 chr2:65086608-65086688 1.4e-05 7_[+2]_65 chr14:61805350-61805430 1.4e-05 42_[+2]_30 chr10:130913030-13091311 1.4e-05 68_[+2]_4 chr7:150103619-150103699 1.4e-05 23_[+2]_49 chr12:117443395-11744347 1.4e-05 21_[+2]_51 chr15:64385349-64385429 1.4e-05 32_[+2]_40 chr18:44497932-44498012 1.4e-05 47_[+2]_25 chr2:47500448-47500528 1.4e-05 57_[+2]_15 chrX:124573226-124573306 1.4e-05 32_[+2]_40 chr12:117484793-11748487 1.4e-05 18_[+2]_54 chr7:30199607-30199687 1.4e-05 9_[+2]_63 chr10:99167589-99167669 1.4e-05 29_[+2]_43 chr20:56039871-56039951 1.4e-05 17_[+2]_55 chr10:49497911-49497991 1.4e-05 41_[+2]_31 chr20:48693341-48693421 1.4e-05 68_[+2]_4 chr17:34077839-34077919 1.4e-05 21_[+2]_51 chr1:224692442-224692522 1.4e-05 4_[+2]_68 chr20:55623385-55623465 1.4e-05 39_[+2]_33 chr12:46121815-46121895 1.4e-05 30_[+2]_42 chr5:38383146-38383226 1.4e-05 40_[+2]_32 chr11:66607968-66608048 1.4e-05 34_[+2]_38 chr11:12710916-12710996 1.4e-05 36_[+2]_36 chr1:2040779-2040859 1.4e-05 45_[+2]_27 chr10:30783174-30783254 1.4e-05 50_[+2]_22 chr9:133327037-133327117 1.4e-05 1_[+2]_71 chr1:93459786-93459866 1.4e-05 25_[+2]_47 chrX:26801787-26801867 1.4e-05 58_[+2]_14 chr21:45279390-45279470 1.4e-05 29_[+2]_43 chr6:34165623-34165703 1.4e-05 50_[+2]_22 chr19:46143360-46143440 1.4e-05 37_[+2]_35 chr6:33821649-33821729 1.4e-05 11_[+2]_61 chr17:77895375-77895455 1.4e-05 2_[+2]_70 chr20:36021044-36021124 1.4e-05 6_[+2]_66 chr1:220543011-220543091 1.4e-05 3_[+2]_69 chr1:120923095-120923175 1.4e-05 64_[+2]_8 chr12:56696251-56696331 1.4e-05 30_[+2]_42 chr7:29838185-29838265 1.4e-05 22_[+2]_50 chr12:102942483-10294256 1.4e-05 37_[+2]_35 chr9:35193913-35193993 1.4e-05 9_[+2]_63 chr5:172337909-172337989 1.4e-05 1_[+2]_71 chr16:22692238-22692318 1.4e-05 20_[+2]_52 chr21:36956282-36956362 1.4e-05 17_[+2]_55 chr17:79283136-79283216 2.8e-05 10_[+2]_62 chrX:41301719-41301799 2.8e-05 14_[+2]_58 chr6:44306421-44306501 2.8e-05 70_[+2]_2 chr2:38861952-38862032 2.8e-05 8_[+2]_64 chr15:58838973-58839053 4.1e-05 56_[+2]_16 chr1:155036940-155037020 4.1e-05 22_[+2]_50 chr2:217157717-217157797 4.1e-05 58_[+2]_14 chr20:52239123-52239203 4.1e-05 58_[+2]_14 chr20:32297335-32297415 4.1e-05 52_[+2]_20 chr12:104917268-10491734 4.1e-05 56_[+2]_16 chr7:76038238-76038318 4.1e-05 9_[+2]_63 chr2:16938554-16938634 4.1e-05 40_[+2]_32 chr19:43809979-43810059 4.1e-05 52_[+2]_20 chr11:12155604-12155684 4.1e-05 17_[+2]_55 chr3:193048760-193048840 4.1e-05 22_[+2]_50 chr2:220405977-220406057 4.1e-05 16_[+2]_56 chr6:157207626-157207706 7e-05 33_[+2]_39 chr1:32879653-32879733 7e-05 38_[+2]_34 chr2:169660786-169660866 7e-05 21_[+2]_51 chr10:121059172-12105925 8.5e-05 43_[+2]_29 chr6:165463016-165463096 8.5e-05 23_[+2]_49 chr10:72997226-72997306 8.5e-05 16_[+2]_56 chr2:63528149-63528229 8.5e-05 30_[+2]_42 chr1:102900173-102900253 8.5e-05 15_[+2]_57 chr6:164377783-164377863 9.9e-05 12_[+2]_60 chr7:105408692-105408772 9.9e-05 9_[+2]_63 chr10:13157928-13158008 9.9e-05 8_[+2]_64 chr12:116796860-11679694 9.9e-05 40_[+2]_32 chr16:69206794-69206874 0.00013 33_[+2]_39 chr10:73196291-73196371 0.00013 21_[+2]_51 chr1:150480399-150480479 0.00013 64_[+2]_8 chr17:7370337-7370417 0.00013 50_[+2]_22 chr1:15573530-15573610 0.00013 20_[+2]_52 chr1:28284297-28284377 0.00013 29_[+2]_43 chr16:85481002-85481082 0.00013 13_[+2]_59 chr1:17799466-17799546 0.00013 44_[+2]_28 chr2:96926322-96926402 0.00013 10_[+2]_62 chr17:62982206-62982286 0.00013 38_[+2]_34 chr10:81206632-81206712 0.00013 16_[+2]_56 chr7:104924637-104924717 0.00013 70_[+2]_2 chr4:1505825-1505905 0.00013 43_[+2]_29 chr1:46987302-46987382 0.00014 29_[+2]_43 chr22:44366070-44366150 0.00014 44_[+2]_28 chr1:28269700-28269780 0.00015 4_[+2]_68 chr17:1553266-1553346 0.00017 20_[+2]_52 chr21:46369794-46369874 0.0002 11_[+2]_61 chr7:44835817-44835897 0.0002 25_[+2]_47 chr12:109548834-10954891 0.0002 22_[+2]_50 chr9:99846853-99846933 0.00021 28_[+2]_44 chr8:95772890-95772970 0.00021 9_[+2]_63 chr20:32889549-32889629 0.00023 10_[+2]_62 chr11:9780493-9780573 0.00026 10_[+2]_62 chr7:101331562-101331642 0.00028 55_[+2]_17 chr20:33292482-33292562 0.00036 2_[+2]_70 chr21:44596914-44596994 0.00039 11_[+2]_61 chr5:175970602-175970682 0.0004 4_[+2]_68 chr8:144360600-144360680 0.00043 1_[+2]_71 chr18:832291-832371 0.00047 22_[+2]_50 chr1:38757899-38757979 0.00051 59_[+2]_13 chr5:171541021-171541101 0.00051 14_[+2]_58 chr11:86902162-86902242 0.00051 25_[+2]_47 chr1:19908860-19908940 0.00057 61_[+2]_11 chr1:15742849-15742929 0.00057 66_[+2]_6 chr9:95748625-95748705 0.00057 29_[+2]_43 chr19:45767070-45767150 0.00065 9_[+2]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACCTTG width=8 seqs=126 chr10:133865765-13386584 ( 54) TGACCTTG 1 chr12:123867349-12386742 ( 21) TGACCTTG 1 chr7:101554808-101554888 ( 17) TGACCTTG 1 chr12:111395122-11139520 ( 4) TGACCTTG 1 chr14:79075899-79075979 ( 42) TGACCTTG 1 chr2:118228069-118228149 ( 72) TGACCTTG 1 chr6:155981862-155981942 ( 2) TGACCTTG 1 chr19:30302253-30302333 ( 48) TGACCTTG 1 chr5:149730197-149730277 ( 23) TGACCTTG 1 chr2:43572077-43572157 ( 37) TGACCTTG 1 chr11:64072280-64072360 ( 70) TGACCTTG 1 chr4:166396074-166396154 ( 34) TGACCTTG 1 chr6:42694446-42694526 ( 1) TGACCTTG 1 chr9:95871633-95871713 ( 62) TGACCTTG 1 chr11:33979017-33979097 ( 8) TGACCTTG 1 chr3:4548939-4549019 ( 44) TGACCTTG 1 chr1:43476795-43476875 ( 4) TGACCTTG 1 chr4:99609754-99609834 ( 61) TGACCTTG 1 chr11:44902643-44902723 ( 6) TGACCTTG 1 chr2:65086608-65086688 ( 8) TGACCTTG 1 chr14:61805350-61805430 ( 43) TGACCTTG 1 chr10:130913030-13091311 ( 69) TGACCTTG 1 chr7:150103619-150103699 ( 24) TGACCTTG 1 chr12:117443395-11744347 ( 22) TGACCTTG 1 chr15:64385349-64385429 ( 33) TGACCTTG 1 chr18:44497932-44498012 ( 48) TGACCTTG 1 chr2:47500448-47500528 ( 58) TGACCTTG 1 chrX:124573226-124573306 ( 33) TGACCTTG 1 chr12:117484793-11748487 ( 19) TGACCTTG 1 chr7:30199607-30199687 ( 10) TGACCTTG 1 chr10:99167589-99167669 ( 30) TGACCTTG 1 chr20:56039871-56039951 ( 18) TGACCTTG 1 chr10:49497911-49497991 ( 42) TGACCTTG 1 chr20:48693341-48693421 ( 69) TGACCTTG 1 chr17:34077839-34077919 ( 22) TGACCTTG 1 chr1:224692442-224692522 ( 5) TGACCTTG 1 chr20:55623385-55623465 ( 40) TGACCTTG 1 chr12:46121815-46121895 ( 31) TGACCTTG 1 chr5:38383146-38383226 ( 41) TGACCTTG 1 chr11:66607968-66608048 ( 35) TGACCTTG 1 chr11:12710916-12710996 ( 37) TGACCTTG 1 chr1:2040779-2040859 ( 46) TGACCTTG 1 chr10:30783174-30783254 ( 51) TGACCTTG 1 chr9:133327037-133327117 ( 2) TGACCTTG 1 chr1:93459786-93459866 ( 26) TGACCTTG 1 chrX:26801787-26801867 ( 59) TGACCTTG 1 chr21:45279390-45279470 ( 30) TGACCTTG 1 chr6:34165623-34165703 ( 51) TGACCTTG 1 chr19:46143360-46143440 ( 38) TGACCTTG 1 chr6:33821649-33821729 ( 12) TGACCTTG 1 chr17:77895375-77895455 ( 3) TGACCTTG 1 chr20:36021044-36021124 ( 7) TGACCTTG 1 chr1:220543011-220543091 ( 4) TGACCTTG 1 chr1:120923095-120923175 ( 65) TGACCTTG 1 chr12:56696251-56696331 ( 31) TGACCTTG 1 chr7:29838185-29838265 ( 23) TGACCTTG 1 chr12:102942483-10294256 ( 38) TGACCTTG 1 chr9:35193913-35193993 ( 10) TGACCTTG 1 chr5:172337909-172337989 ( 2) TGACCTTG 1 chr16:22692238-22692318 ( 21) TGACCTTG 1 chr21:36956282-36956362 ( 18) TGACCTTG 1 chr17:79283136-79283216 ( 11) TGACCTTT 1 chrX:41301719-41301799 ( 15) TGACCTTT 1 chr6:44306421-44306501 ( 71) TGACCTTT 1 chr2:38861952-38862032 ( 9) TGACCTTT 1 chr15:58838973-58839053 ( 57) TGACCTTC 1 chr1:155036940-155037020 ( 23) TGACCTTC 1 chr2:217157717-217157797 ( 59) TGACCTTC 1 chr20:52239123-52239203 ( 59) TGACCTTC 1 chr20:32297335-32297415 ( 53) TGACCTTC 1 chr12:104917268-10491734 ( 57) TGACCTTC 1 chr7:76038238-76038318 ( 10) TGACCTTC 1 chr2:16938554-16938634 ( 41) TGACCTTC 1 chr19:43809979-43810059 ( 53) TGACCTTC 1 chr11:12155604-12155684 ( 18) TGACCTTC 1 chr3:193048760-193048840 ( 23) TGACCTTC 1 chr2:220405977-220406057 ( 17) TGACCTTC 1 chr6:157207626-157207706 ( 34) TGTCCTTG 1 chr1:32879653-32879733 ( 39) TGTCCTTG 1 chr2:169660786-169660866 ( 22) TGTCCTTG 1 chr10:121059172-12105925 ( 44) TGCCCTTG 1 chr6:165463016-165463096 ( 24) TGCCCTTG 1 chr10:72997226-72997306 ( 17) TGCCCTTG 1 chr2:63528149-63528229 ( 31) TGCCCTTG 1 chr1:102900173-102900253 ( 16) TGCCCTTG 1 chr6:164377783-164377863 ( 13) TAACCTTG 1 chr7:105408692-105408772 ( 10) TAACCTTG 1 chr10:13157928-13158008 ( 9) TAACCTTG 1 chr12:116796860-11679694 ( 41) TAACCTTG 1 chr16:69206794-69206874 ( 34) TGACCTCT 1 chr10:73196291-73196371 ( 22) TGACCTCT 1 chr1:150480399-150480479 ( 65) TGACTTTG 1 chr17:7370337-7370417 ( 51) TGACCTCT 1 chr1:15573530-15573610 ( 21) TGACCTCT 1 chr1:28284297-28284377 ( 30) TGACCTCT 1 chr16:85481002-85481082 ( 14) TGACCTCT 1 chr1:17799466-17799546 ( 45) TGACCTCT 1 chr2:96926322-96926402 ( 11) TGACTTTG 1 chr17:62982206-62982286 ( 39) TGACCTCT 1 chr10:81206632-81206712 ( 17) TGACCTCT 1 chr7:104924637-104924717 ( 71) TGACTTTG 1 chr4:1505825-1505905 ( 44) TGACCTCT 1 chr1:46987302-46987382 ( 30) TCACCTTG 1 chr22:44366070-44366150 ( 45) TCACCTTG 1 chr1:28269700-28269780 ( 5) TGACCTCC 1 chr17:1553266-1553346 ( 21) TGTCCTTT 1 chr21:46369794-46369874 ( 12) CGACCTTG 1 chr7:44835817-44835897 ( 26) CGACCTTG 1 chr12:109548834-10954891 ( 23) TGCCCTTT 1 chr9:99846853-99846933 ( 29) TGTCCTTC 1 chr8:95772890-95772970 ( 10) TGTCCTTC 1 chr20:32889549-32889629 ( 11) TAACCTTT 1 chr11:9780493-9780573 ( 11) TGACCCTG 1 chr7:101331562-101331642 ( 56) TGCCCTCG 1 chr20:33292482-33292562 ( 3) TGACATTG 1 chr21:44596914-44596994 ( 12) AGACCTTG 1 chr5:175970602-175970682 ( 5) TGACTTCG 1 chr8:144360600-144360680 ( 2) TCACCTCG 1 chr18:832291-832371 ( 23) CGACCTTC 1 chr1:38757899-38757979 ( 60) TGTCCTCT 1 chr5:171541021-171541101 ( 15) TGACCCTT 1 chr11:86902162-86902242 ( 26) TGTCCTCT 1 chr1:19908860-19908940 ( 62) TGCCCTCT 1 chr1:15742849-15742929 ( 67) TCTCCTTG 1 chr9:95748625-95748705 ( 30) TGCCTTTG 1 chr19:45767070-45767150 ( 10) TAACCTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.89406 E= 1.8e-143 -496 -340 -1362 203 -238 -298 180 -1362 179 -181 -1362 -173 -1362 199 -1362 -1362 -496 192 -1362 -258 -1362 -398 -1362 206 -1362 -81 -1362 186 -1362 -98 140 -44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 126 E= 1.8e-143 0.007937 0.023810 0.000000 0.968254 0.047619 0.031746 0.920635 0.000000 0.857143 0.071429 0.000000 0.071429 0.000000 1.000000 0.000000 0.000000 0.007937 0.952381 0.000000 0.039683 0.000000 0.015873 0.000000 0.984127 0.000000 0.142857 0.000000 0.857143 0.000000 0.126984 0.698413 0.174603 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACCTTG MEME-2 regular expression -------------------------------------------------------------------------------- TGACCTTG -------------------------------------------------------------------------------- Time 8.31 secs. ******************************************************************************** ******************************************************************************** MOTIF CYCAKTTT MEME-3 width = 8 sites = 54 llr = 463 E-value = 2.1e-027 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::a:::: pos.-specific C a7a:1:12 probability G ::::3::: matrix T :3::6a88 bits 2.1 * ** * 1.9 * ** * 1.7 * ** * 1.5 * ** * Relative 1.2 * ** * * Entropy 1.0 **** *** (12.4 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCCATTTT consensus T G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:141071518-141071598 4 1.24e-05 act cccatttt acagatgagg chr3:53290311-53290391 37 1.24e-05 CACGGCGAAT cccatttt agagatggac chr10:46046470-46046550 33 1.24e-05 cggatttatt cccatttt atagacgagg chr15:70731652-70731732 3 1.24e-05 cc cccatttt tcagaagagg chr12:93735366-93735446 4 1.24e-05 ggc cccatttt atagatgagg chr16:70007001-70007081 18 1.24e-05 gacagttagg cccatttt acagatgggg chr5:171545143-171545223 6 1.24e-05 ttgtc cccatttt acagatgagg chr1:167903189-167903269 13 1.24e-05 tacaattact cccatttt atagatgaga chr14:70119738-70119818 15 1.24e-05 aagtaacagc cccatttt acaaatgagg chr5:171541021-171541101 45 1.24e-05 aattatgact cccatttt acagataagg chr16:29986621-29986701 20 1.24e-05 ttggcatctt cccatttt acagttgaga chr16:70234131-70234211 21 1.24e-05 gacagttatg cccatttt acagatggga chr14:77424584-77424664 25 1.24e-05 tcttagcatc cccatttt gcagctgaga chr3:5226849-5226929 38 1.24e-05 tcatcactca cccatttt atggatgagg chrX:53406076-53406156 25 1.24e-05 tattgttagc cccatttt acagatgagg chr20:48328791-48328871 26 1.24e-05 gactcacatt cccatttt acagaggaga chr7:73768511-73768591 2 1.24e-05 t cccatttt acagatgaga chr16:48417897-48417977 28 1.24e-05 tgtcgttaca cccatttt gcagataagg chr19:3434714-3434794 11 3.78e-05 ctgtgtgtgc cccagttt ccccatccat chr11:33979017-33979097 24 5.09e-05 tgaggaagac ctcagttt cctcatctgt chr7:150103619-150103699 56 5.09e-05 ctcactgagc ctcagttt ccccatcttt chr12:117484793-11748487 52 5.09e-05 ttctctgagc ctcagttt cctcatctgt chr10:99167589-99167669 65 5.09e-05 ttccctgagc ctcagttt tccacatc chr17:34077839-34077919 45 5.09e-05 gaccctgagc ctcagttt cctcttctgt chr1:224692442-224692522 39 5.09e-05 cttgctaggc ctcagttt tcttatctgg chr3:128176350-128176430 1 5.09e-05 . ctcagttt ctgcatctgc chr1:2040779-2040859 59 5.09e-05 ccttggtggc ctcagttt tctcatctgt chr6:33821649-33821729 35 5.09e-05 gtcagttaac ctcagttt gctcatctgt chr11:12155604-12155684 32 5.09e-05 cttcatgagc ctcagttt cttcacctgg chr16:22692238-22692318 44 5.09e-05 gttacttaac ctcagttt ctccatctgc chr11:57297815-57297895 21 6.40e-05 gcttaaccac cccatttc acggatgtgg chr17:36500407-36500487 24 6.40e-05 tgttcttatc cccatttc acagatgcag chr20:52239123-52239203 19 6.40e-05 agttgaatgt cccatttc acagattaga chr20:48760584-48760664 30 6.40e-05 GGAGTCTGTA CCCATTTC ACAGATGACG chr11:57175563-57175643 27 6.40e-05 gaatatcaag cccatttc acagataaag chr20:55850101-55850181 23 6.40e-05 tgcagtatct cccatttc acagatgaag chr22:30122885-30122965 12 6.40e-05 CATCATTCTG CCCATTTC ACTGTGGGTA chr11:66607968-66608048 8 7.63e-05 TCAAGCT CTCATTTC ATCAGAAGAA chr1:150480399-150480479 30 1.04e-04 TCTAATCAGT CCCATTCT TCTCAATCCT chr12:52366357-52366437 10 1.17e-04 attaacagc cccacttt acagattagg chr6:154801393-154801473 29 1.17e-04 tattattatg cccacttt gcagatgtga chr10:27847618-27847698 2 1.43e-04 T CTCAGTTC TCCATGAGGT chr10:72997226-72997306 42 1.43e-04 ctcttaagac ctcagttc tctcatctgt chr6:157207626-157207706 52 1.70e-04 CCTCTCTTGT CCCAGTCT GAGTGGCTGT chr3:187397507-187397587 5 1.70e-04 ATAT CTCACTTT CTTTGCAAGG chr6:35455572-35455652 9 1.83e-04 gaataaag cccattat ccagagatga chr3:196753011-196753091 24 1.83e-04 tgttactatc cccattat acagtctggg chr2:242089421-242089501 6 1.97e-04 TTCGG CCCATTGT ACAGACGCAG chr14:71920889-71920969 17 1.97e-04 gcatgttata cccattgt atgtacaagg chr11:44902643-44902723 39 2.11e-04 ctctctgagc ctcagtct tcactgctga chr5:38383146-38383226 15 2.11e-04 GCCCTTGCGA CTCAGTCT GGAGTCACCT chr20:36021044-36021124 41 2.11e-04 cttctctggc ctcagtct tcccagctgt chr7:105408692-105408772 34 2.25e-04 aaccaccata cccattcc atagatgggc chr12:120554003-12055408 21 2.39e-04 aaggcacatc cccacttc tcagatgagg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:141071518-141071598 1.2e-05 3_[+3]_69 chr3:53290311-53290391 1.2e-05 36_[+3]_36 chr10:46046470-46046550 1.2e-05 32_[+3]_40 chr15:70731652-70731732 1.2e-05 2_[+3]_70 chr12:93735366-93735446 1.2e-05 3_[+3]_69 chr16:70007001-70007081 1.2e-05 17_[+3]_55 chr5:171545143-171545223 1.2e-05 5_[+3]_67 chr1:167903189-167903269 1.2e-05 12_[+3]_60 chr14:70119738-70119818 1.2e-05 14_[+3]_58 chr5:171541021-171541101 1.2e-05 44_[+3]_28 chr16:29986621-29986701 1.2e-05 19_[+3]_53 chr16:70234131-70234211 1.2e-05 20_[+3]_52 chr14:77424584-77424664 1.2e-05 24_[+3]_48 chr3:5226849-5226929 1.2e-05 37_[+3]_35 chrX:53406076-53406156 1.2e-05 24_[+3]_48 chr20:48328791-48328871 1.2e-05 25_[+3]_47 chr7:73768511-73768591 1.2e-05 1_[+3]_71 chr16:48417897-48417977 1.2e-05 27_[+3]_45 chr19:3434714-3434794 3.8e-05 10_[+3]_62 chr11:33979017-33979097 5.1e-05 23_[+3]_49 chr7:150103619-150103699 5.1e-05 55_[+3]_17 chr12:117484793-11748487 5.1e-05 51_[+3]_21 chr10:99167589-99167669 5.1e-05 64_[+3]_8 chr17:34077839-34077919 5.1e-05 44_[+3]_28 chr1:224692442-224692522 5.1e-05 38_[+3]_34 chr3:128176350-128176430 5.1e-05 [+3]_72 chr1:2040779-2040859 5.1e-05 58_[+3]_14 chr6:33821649-33821729 5.1e-05 34_[+3]_38 chr11:12155604-12155684 5.1e-05 31_[+3]_41 chr16:22692238-22692318 5.1e-05 43_[+3]_29 chr11:57297815-57297895 6.4e-05 20_[+3]_52 chr17:36500407-36500487 6.4e-05 23_[+3]_49 chr20:52239123-52239203 6.4e-05 18_[+3]_54 chr20:48760584-48760664 6.4e-05 29_[+3]_43 chr11:57175563-57175643 6.4e-05 26_[+3]_46 chr20:55850101-55850181 6.4e-05 22_[+3]_50 chr22:30122885-30122965 6.4e-05 11_[+3]_61 chr11:66607968-66608048 7.6e-05 7_[+3]_65 chr1:150480399-150480479 0.0001 29_[+3]_43 chr12:52366357-52366437 0.00012 9_[+3]_63 chr6:154801393-154801473 0.00012 28_[+3]_44 chr10:27847618-27847698 0.00014 1_[+3]_71 chr10:72997226-72997306 0.00014 41_[+3]_31 chr6:157207626-157207706 0.00017 51_[+3]_21 chr3:187397507-187397587 0.00017 4_[+3]_68 chr6:35455572-35455652 0.00018 8_[+3]_64 chr3:196753011-196753091 0.00018 23_[+3]_49 chr2:242089421-242089501 0.0002 5_[+3]_67 chr14:71920889-71920969 0.0002 16_[+3]_56 chr11:44902643-44902723 0.00021 38_[+3]_34 chr5:38383146-38383226 0.00021 14_[+3]_58 chr20:36021044-36021124 0.00021 40_[+3]_32 chr7:105408692-105408772 0.00022 33_[+3]_39 chr12:120554003-12055408 0.00024 20_[+3]_52 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYCAKTTT width=8 seqs=54 chr5:141071518-141071598 ( 4) CCCATTTT 1 chr3:53290311-53290391 ( 37) CCCATTTT 1 chr10:46046470-46046550 ( 33) CCCATTTT 1 chr15:70731652-70731732 ( 3) CCCATTTT 1 chr12:93735366-93735446 ( 4) CCCATTTT 1 chr16:70007001-70007081 ( 18) CCCATTTT 1 chr5:171545143-171545223 ( 6) CCCATTTT 1 chr1:167903189-167903269 ( 13) CCCATTTT 1 chr14:70119738-70119818 ( 15) CCCATTTT 1 chr5:171541021-171541101 ( 45) CCCATTTT 1 chr16:29986621-29986701 ( 20) CCCATTTT 1 chr16:70234131-70234211 ( 21) CCCATTTT 1 chr14:77424584-77424664 ( 25) CCCATTTT 1 chr3:5226849-5226929 ( 38) CCCATTTT 1 chrX:53406076-53406156 ( 25) CCCATTTT 1 chr20:48328791-48328871 ( 26) CCCATTTT 1 chr7:73768511-73768591 ( 2) CCCATTTT 1 chr16:48417897-48417977 ( 28) CCCATTTT 1 chr19:3434714-3434794 ( 11) CCCAGTTT 1 chr11:33979017-33979097 ( 24) CTCAGTTT 1 chr7:150103619-150103699 ( 56) CTCAGTTT 1 chr12:117484793-11748487 ( 52) CTCAGTTT 1 chr10:99167589-99167669 ( 65) CTCAGTTT 1 chr17:34077839-34077919 ( 45) CTCAGTTT 1 chr1:224692442-224692522 ( 39) CTCAGTTT 1 chr3:128176350-128176430 ( 1) CTCAGTTT 1 chr1:2040779-2040859 ( 59) CTCAGTTT 1 chr6:33821649-33821729 ( 35) CTCAGTTT 1 chr11:12155604-12155684 ( 32) CTCAGTTT 1 chr16:22692238-22692318 ( 44) CTCAGTTT 1 chr11:57297815-57297895 ( 21) CCCATTTC 1 chr17:36500407-36500487 ( 24) CCCATTTC 1 chr20:52239123-52239203 ( 19) CCCATTTC 1 chr20:48760584-48760664 ( 30) CCCATTTC 1 chr11:57175563-57175643 ( 27) CCCATTTC 1 chr20:55850101-55850181 ( 23) CCCATTTC 1 chr22:30122885-30122965 ( 12) CCCATTTC 1 chr11:66607968-66608048 ( 8) CTCATTTC 1 chr1:150480399-150480479 ( 30) CCCATTCT 1 chr12:52366357-52366437 ( 10) CCCACTTT 1 chr6:154801393-154801473 ( 29) CCCACTTT 1 chr10:27847618-27847698 ( 2) CTCAGTTC 1 chr10:72997226-72997306 ( 42) CTCAGTTC 1 chr6:157207626-157207706 ( 52) CCCAGTCT 1 chr3:187397507-187397587 ( 5) CTCACTTT 1 chr6:35455572-35455652 ( 9) CCCATTAT 1 chr3:196753011-196753091 ( 24) CCCATTAT 1 chr2:242089421-242089501 ( 6) CCCATTGT 1 chr14:71920889-71920969 ( 17) CCCATTGT 1 chr11:44902643-44902723 ( 39) CTCAGTCT 1 chr5:38383146-38383226 ( 15) CTCAGTCT 1 chr20:36021044-36021124 ( 41) CTCAGTCT 1 chr7:105408692-105408772 ( 34) CCCATTCC 1 chr12:120554003-12055408 ( 21) CCCACTTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.59303 E= 2.1e-027 -1240 199 -1240 -1240 -1240 141 -1240 49 -1240 199 -1240 -1240 201 -1240 -1240 -1240 -1240 -176 33 132 -1240 -1240 -1240 208 -274 -118 -283 178 -1240 -18 -1240 172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 2.1e-027 0.000000 1.000000 0.000000 0.000000 0.000000 0.666667 0.000000 0.333333 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.074074 0.333333 0.592593 0.000000 0.000000 0.000000 1.000000 0.037037 0.111111 0.037037 0.814815 0.000000 0.222222 0.000000 0.777778 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-3 regular expression -------------------------------------------------------------------------------- C[CT]CA[TG]TT[TC] -------------------------------------------------------------------------------- Time 11.64 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAATGGG MEME-4 width = 8 sites = 40 llr = 367 E-value = 1.4e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 8aa7::2: pos.-specific C :::2:::: probability G 2::1:a8a matrix T ::::a::: bits 2.1 ** * 1.9 ** ** * 1.7 ** ** * 1.5 ** ** * Relative 1.2 *** **** Entropy 1.0 *** **** (13.2 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAATGGG consensus C A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:73196291-73196371 54 1.65e-05 cctcgtctgt aaaatggg gacaagaaga chr12:123867349-12386742 71 1.65e-05 ccccatctgt aaaatggg tg chr9:101096708-101096788 63 1.65e-05 atgaatctct aaaatggg gatGTCAAGG chr19:3434714-3434794 29 1.65e-05 ccccatccat aaaatggg atcatacccc chr6:155981862-155981942 46 1.65e-05 ctccatctgt aaaatggg gctaccttac chr9:130547123-130547203 33 1.65e-05 cttcttctgc aaaatggg ttagtgatcc chr1:28284297-28284377 60 1.65e-05 cttcatctgt aaaatggg agtaacagaa chr19:10655213-10655293 28 1.65e-05 ccctctctgt aaaatggg tacaataatc chr8:95968324-95968404 29 1.65e-05 cctgttgcat aaaatggg gatgattaga chr17:34077839-34077919 63 1.65e-05 cctcttctgt aaaatggg gatgtagtct chr3:128176350-128176430 19 1.65e-05 ctgcatctgc aaaatggg ggtgaacagt chr10:81206632-81206712 69 1.65e-05 tctcctctgt aaaatggg agca chr6:33821649-33821729 53 1.65e-05 gctcatctgt aaaatggg gcttaaaaaa chr11:12155604-12155684 50 1.65e-05 cttcacctgg aaaatggg ttggatgatc chr17:77895375-77895455 55 1.65e-05 ctcactctgt aaaatggg cacaaacaag chr3:193048760-193048840 55 1.65e-05 tcctatctgt aaaatggg aacactggac chr1:220543011-220543091 49 1.65e-05 tctcatttgt aaaatggg tgtaataaga chr3:72382091-72382171 46 1.65e-05 cttcatctgt aaaatggg gtggtGGTGA chr5:172337909-172337989 49 1.65e-05 cctcatctgc aaaatggg cttagtaatg chr21:36956282-36956362 49 1.65e-05 acctcacctg aaaatggg gacaataatg chr1:15573530-15573610 51 6.62e-05 tcctatctgt gaaatggg gCAGGCTCGT chr11:44902643-44902723 57 6.62e-05 tcactgctga gaaatggg ggcaataata chr12:117484793-11748487 70 6.62e-05 cctcatctgt gaaatggg aat chr11:16034121-16034201 30 6.62e-05 TAGGGCAGAG GAAATGGG CTGTACTGAG chr1:224692442-224692522 57 6.62e-05 tcttatctgg gaaatggg acattgcaat chr12:6561768-6561848 72 6.62e-05 AAGGCTACCC GAAATGGG A chr2:220405977-220406057 50 6.62e-05 gctcatctgc gaaatggg catgcgtcct chr1:46987302-46987382 59 8.38e-05 tctccttggt aaagtggg gcgaatgata chr1:28269700-28269780 35 8.38e-05 ccttatctgt aaagtggg ataatgttcc chr19:4078359-4078439 40 8.38e-05 cagttaccca aaagtggg gctaagaatc chr10:72997226-72997306 60 8.38e-05 tctcatctgt aaagtggg ggtaagagca chr11:57297815-57297895 39 9.95e-05 acggatgtgg aaactgag gcctagccca chr3:53290311-53290391 55 9.95e-05 agagatggac aaactgag gcttggcaag chr12:93735366-93735446 22 9.95e-05 atagatgagg aaactgag ctccagggag chr19:46917807-46917887 45 9.95e-05 acagctgagg aaactgag gcccaaggac chr20:48842760-48842840 11 9.95e-05 gcagacagag aaactgag gccagggagt chr20:32297335-32297415 38 9.95e-05 acagatggaa aaactgag aggaaagtga chr14:77424584-77424664 44 9.95e-05 cagctgagaa aaactgag actgggaggt chrX:53406076-53406156 43 9.95e-05 acagatgagg aaactgag gcacagaagg chr22:30122885-30122965 30 9.95e-05 ACTGTGGGTA AAACTGAG GCTGGCCCAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:73196291-73196371 1.6e-05 53_[+4]_19 chr12:123867349-12386742 1.6e-05 70_[+4]_2 chr9:101096708-101096788 1.6e-05 62_[+4]_10 chr19:3434714-3434794 1.6e-05 28_[+4]_44 chr6:155981862-155981942 1.6e-05 45_[+4]_27 chr9:130547123-130547203 1.6e-05 32_[+4]_40 chr1:28284297-28284377 1.6e-05 59_[+4]_13 chr19:10655213-10655293 1.6e-05 27_[+4]_45 chr8:95968324-95968404 1.6e-05 28_[+4]_44 chr17:34077839-34077919 1.6e-05 62_[+4]_10 chr3:128176350-128176430 1.6e-05 18_[+4]_54 chr10:81206632-81206712 1.6e-05 68_[+4]_4 chr6:33821649-33821729 1.6e-05 52_[+4]_20 chr11:12155604-12155684 1.6e-05 49_[+4]_23 chr17:77895375-77895455 1.6e-05 54_[+4]_18 chr3:193048760-193048840 1.6e-05 54_[+4]_18 chr1:220543011-220543091 1.6e-05 48_[+4]_24 chr3:72382091-72382171 1.6e-05 45_[+4]_27 chr5:172337909-172337989 1.6e-05 48_[+4]_24 chr21:36956282-36956362 1.6e-05 48_[+4]_24 chr1:15573530-15573610 6.6e-05 50_[+4]_22 chr11:44902643-44902723 6.6e-05 56_[+4]_16 chr12:117484793-11748487 6.6e-05 69_[+4]_3 chr11:16034121-16034201 6.6e-05 29_[+4]_43 chr1:224692442-224692522 6.6e-05 56_[+4]_16 chr12:6561768-6561848 6.6e-05 71_[+4]_1 chr2:220405977-220406057 6.6e-05 49_[+4]_23 chr1:46987302-46987382 8.4e-05 58_[+4]_14 chr1:28269700-28269780 8.4e-05 34_[+4]_38 chr19:4078359-4078439 8.4e-05 39_[+4]_33 chr10:72997226-72997306 8.4e-05 59_[+4]_13 chr11:57297815-57297895 9.9e-05 38_[+4]_34 chr3:53290311-53290391 9.9e-05 54_[+4]_18 chr12:93735366-93735446 9.9e-05 21_[+4]_51 chr19:46917807-46917887 9.9e-05 44_[+4]_28 chr20:48842760-48842840 9.9e-05 10_[+4]_62 chr20:32297335-32297415 9.9e-05 37_[+4]_35 chr14:77424584-77424664 9.9e-05 43_[+4]_29 chrX:53406076-53406156 9.9e-05 42_[+4]_30 chr22:30122885-30122965 9.9e-05 29_[+4]_43 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAATGGG width=8 seqs=40 chr10:73196291-73196371 ( 54) AAAATGGG 1 chr12:123867349-12386742 ( 71) AAAATGGG 1 chr9:101096708-101096788 ( 63) AAAATGGG 1 chr19:3434714-3434794 ( 29) AAAATGGG 1 chr6:155981862-155981942 ( 46) AAAATGGG 1 chr9:130547123-130547203 ( 33) AAAATGGG 1 chr1:28284297-28284377 ( 60) AAAATGGG 1 chr19:10655213-10655293 ( 28) AAAATGGG 1 chr8:95968324-95968404 ( 29) AAAATGGG 1 chr17:34077839-34077919 ( 63) AAAATGGG 1 chr3:128176350-128176430 ( 19) AAAATGGG 1 chr10:81206632-81206712 ( 69) AAAATGGG 1 chr6:33821649-33821729 ( 53) AAAATGGG 1 chr11:12155604-12155684 ( 50) AAAATGGG 1 chr17:77895375-77895455 ( 55) AAAATGGG 1 chr3:193048760-193048840 ( 55) AAAATGGG 1 chr1:220543011-220543091 ( 49) AAAATGGG 1 chr3:72382091-72382171 ( 46) AAAATGGG 1 chr5:172337909-172337989 ( 49) AAAATGGG 1 chr21:36956282-36956362 ( 49) AAAATGGG 1 chr1:15573530-15573610 ( 51) GAAATGGG 1 chr11:44902643-44902723 ( 57) GAAATGGG 1 chr12:117484793-11748487 ( 70) GAAATGGG 1 chr11:16034121-16034201 ( 30) GAAATGGG 1 chr1:224692442-224692522 ( 57) GAAATGGG 1 chr12:6561768-6561848 ( 72) GAAATGGG 1 chr2:220405977-220406057 ( 50) GAAATGGG 1 chr1:46987302-46987382 ( 59) AAAGTGGG 1 chr1:28269700-28269780 ( 35) AAAGTGGG 1 chr19:4078359-4078439 ( 40) AAAGTGGG 1 chr10:72997226-72997306 ( 60) AAAGTGGG 1 chr11:57297815-57297895 ( 39) AAACTGAG 1 chr3:53290311-53290391 ( 55) AAACTGAG 1 chr12:93735366-93735446 ( 22) AAACTGAG 1 chr19:46917807-46917887 ( 45) AAACTGAG 1 chr20:48842760-48842840 ( 11) AAACTGAG 1 chr20:32297335-32297415 ( 38) AAACTGAG 1 chr14:77424584-77424664 ( 44) AAACTGAG 1 chrX:53406076-53406156 ( 43) AAACTGAG 1 chr22:30122885-30122965 ( 30) AAACTGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.08256 E= 1.4e-022 173 -1197 -60 -1197 201 -1197 -1197 -1197 201 -1197 -1197 -1197 145 -16 -140 -1197 -1197 -1197 -1197 208 -1197 -1197 192 -1197 -14 -1197 155 -1197 -1197 -1197 192 -1197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 40 E= 1.4e-022 0.825000 0.000000 0.175000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.675000 0.225000 0.100000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.225000 0.000000 0.775000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAATGGG MEME-4 regular expression -------------------------------------------------------------------------------- AAA[AC]TG[GA]G -------------------------------------------------------------------------------- Time 14.87 secs. ******************************************************************************** ******************************************************************************** MOTIF CTYMTCTG MEME-5 width = 8 sites = 71 llr = 521 E-value = 4.3e-011 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::4:::: pos.-specific C 63743a:: probability G 2::::::a matrix T 27327:a: bits 2.1 ** 1.9 *** 1.7 *** 1.5 *** Relative 1.2 * **** Entropy 1.0 ** **** (10.6 bits) 0.8 ** **** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCATCTG consensus TCTCC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:101331562-101331642 71 2.77e-05 TCGCCTCCTG CTCCTCTG GC chr14:79075899-79075979 66 2.77e-05 cttcagcatt ctcatctg ttgaatg chr11:33979017-33979097 33 2.77e-05 cctcagtttc ctcatctg tgcaatgggg chr12:117484793-11748487 61 2.77e-05 cctcagtttc ctcatctg tgaaatggga chr16:85481002-85481082 37 2.77e-05 ctttgacttt ctcatctg aaaaacgggg chr7:76038238-76038318 39 2.77e-05 cctcactgtt ctcatctg taaaatggct chr1:2040779-2040859 68 2.77e-05 cctcagtttt ctcatctg taaag chr10:81206632-81206712 60 2.77e-05 agcctgtttt ctcctctg taaaatggga chr21:45279390-45279470 67 2.77e-05 TGAGGCCAGG CTCCTCTG GGAGTC chr6:33821649-33821729 44 2.77e-05 cctcagtttg ctcatctg taaaatgggg chr10:72997226-72997306 51 2.77e-05 cctcagttct ctcatctg taaagtgggg chr2:220405977-220406057 41 2.77e-05 cctccgctag ctcatctg cgaaatgggc chr5:172337909-172337989 40 2.77e-05 cctcagattc ctcatctg caaaatgggc chr8:144360600-144360680 23 5.39e-05 cctccgggtt cttctctg gaaaacgggC chr2:217157717-217157797 27 5.39e-05 GAGTTTCCCC CTTATCTG TGGGAGACAG chr1:28269700-28269780 26 5.39e-05 ccttagtttc cttatctg taaagtggga chr1:224692442-224692522 48 5.39e-05 cctcagtttt cttatctg ggaaatggga chr11:12710916-12710996 27 5.39e-05 GTTTCCTTca cttatctg tttgaccttg chr8:95772890-95772970 30 5.39e-05 CTTCACTGTT CTTATCTG AGCAAGGTCA chr20:36021044-36021124 31 5.39e-05 gaggcctttg cttctctg gcctcagtct chr12:123867349-12386742 62 1.26e-04 cctctattgc cccatctg taaaatgggt chr12:111395122-11139520 46 1.26e-04 cctcaatcac ctcccctg tgaagtggga chr1:155036940-155037020 45 1.26e-04 cctcatttat ctcacctg tataatgggc chr19:4298779-4298859 39 1.26e-04 gctcaacaac cccatctg taagatgggt chr19:45767070-45767150 33 1.26e-04 cctctatttt ctcttctg gagtaggggt chr17:34077839-34077919 54 1.26e-04 cctcagtttc ctcttctg taaaatgggg chr21:36956282-36956362 41 1.26e-04 cctcaattac ctcacctg aaaatgggga chr17:79283136-79283216 73 1.52e-04 AGGAGGAAAC TTCCTCTG chr9:101096708-101096788 45 1.52e-04 cagctttagt ttcctctg atgaatctct chr1:165362404-165362484 25 1.52e-04 GCGGGGCCAG TTCCtctg tggtctgtgg chr1:28284297-28284377 51 1.52e-04 cctcacttgc ttcatctg taaaatggga chr1:95560562-95560642 29 1.52e-04 cctgtatttc ttcatctg taaaatgaag chr3:72382091-72382171 37 1.52e-04 cctcagactc ttcatctg taaaatgggg chr11:47433168-47433248 58 1.81e-04 agtctccaaa gtcatctg ccaaggtcac chr12:116796860-11679694 22 1.81e-04 AGTGGAGTTT GTCCTCTG CCTGGTGTGG chr17:62982206-62982286 64 1.81e-04 TACTGAAGAC GTCCTCTG TGTCCTTTT chr1:15573530-15573610 42 2.49e-04 cctccgcttt cctatctg tgaaatgggg chr5:138897983-138898063 3 2.49e-04 CC CTTCCCTG ACCCCTACCC chr11:44902643-44902723 28 2.49e-04 agtaacttaa cctctctg agcctcagtc chr19:10655213-10655293 19 2.49e-04 cgtttttgcc cctctctg taaaatgggt chr10:99167589-99167669 54 2.49e-04 tcaccttact cttccctg agcctcagtt chr9:133327037-133327117 23 2.49e-04 ctgccactga cctctctg agccctgctg chr17:77895375-77895455 25 2.49e-04 ggttccttga cctctctg ggcctcggct chr3:193048760-193048840 46 2.49e-04 cctcaacgtt cctatctg taaaatggga chr6:157207626-157207706 4 3.33e-04 CTG CTCTCCTG GGACACAGCA chr5:149730197-149730277 67 3.33e-04 GTGCACTGCC CTCTCCTG GCTGGT chr21:46369794-46369874 32 4.01e-04 TTCCTGGCCG TCCCTCTG CCCTGGTGAT chr6:155981862-155981942 37 4.01e-04 gtttcttttc tccatctg taaaatgggg chr9:130547123-130547203 24 4.01e-04 cctcaacgtc ttcttctg caaaatgggt chr1:15742849-15742929 44 4.01e-04 AGCAGCTGAG TTCCCCTG ACTGCCGGGC chr11:12155604-12155684 41 4.01e-04 cctcagtttc ttcacctg gaaaatgggt chr16:22692238-22692318 53 4.01e-04 cctcagtttc tccatctg caaaatggag chr22:44366070-44366150 70 4.28e-04 GTGGTGCCTT GTTCTCTG AAG chr6:44306421-44306501 17 5.04e-04 GGTTTATACT GCCCTCTG GTGCACACTT chr10:130913030-13091311 59 5.04e-04 AGGCAcactc gccctctg tgtgaccttg chr5:38383146-38383226 26 5.04e-04 TCAGTCTGGA GTCACCTG AAGTGGTTGA chr12:11989989-11990069 32 5.60e-04 GCCACTCCCA CCTCCCTG TGATTCTAGA chr10:120924970-12092505 42 5.60e-04 cggcccgccc cctccctg cccctagtcg chr16:3959199-3959279 67 5.60e-04 GTTCACATCC CCTTTCTG GGTTCT chr15:31727615-31727695 58 5.60e-04 GGTCCAAGCT CTTTCCTG GACATCTGCA chr19:4078359-4078439 15 5.60e-04 cctgagcctc ctttcctg aacccctcag chr19:45439229-45439309 68 5.60e-04 AACACATAGC CCTCCCTG CGTGC chr3:4548939-4549019 55 6.38e-04 gaccttgaag tttccctg aCCCTTGGGC chr3:50473675-50473755 27 6.94e-04 GCTGCCCGGC TTCTCCTG GCCTGGGATG chr10:49497911-49497991 28 6.94e-04 TCAGCCGCAG TCCTTCTG TCAGAGTGAC chr17:73575170-73575250 49 7.66e-04 TAGCCAAGCT GTTCCCTG AAGGttgttc chr6:164377783-164377863 62 8.28e-04 AGCGGACAGA GCCCCCTG CTGGAAGTTC chr16:88182757-88182837 4 8.28e-04 AAG GTCTCCTG GTACCACATC chr6:42694446-42694526 63 8.28e-04 GTCTGTGGAT GCCCCCTG GTGGCCCTAA chr1:23493960-23494040 38 8.28e-04 AGGCAGTCTG GCCTTCTG GAAATCACAC chr1:93459786-93459866 72 8.28e-04 agaaaagact gccacctg g -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:101331562-101331642 2.8e-05 70_[+5]_2 chr14:79075899-79075979 2.8e-05 65_[+5]_7 chr11:33979017-33979097 2.8e-05 32_[+5]_40 chr12:117484793-11748487 2.8e-05 60_[+5]_12 chr16:85481002-85481082 2.8e-05 36_[+5]_36 chr7:76038238-76038318 2.8e-05 38_[+5]_34 chr1:2040779-2040859 2.8e-05 67_[+5]_5 chr10:81206632-81206712 2.8e-05 59_[+5]_13 chr21:45279390-45279470 2.8e-05 66_[+5]_6 chr6:33821649-33821729 2.8e-05 43_[+5]_29 chr10:72997226-72997306 2.8e-05 50_[+5]_22 chr2:220405977-220406057 2.8e-05 40_[+5]_32 chr5:172337909-172337989 2.8e-05 39_[+5]_33 chr8:144360600-144360680 5.4e-05 22_[+5]_50 chr2:217157717-217157797 5.4e-05 26_[+5]_46 chr1:28269700-28269780 5.4e-05 25_[+5]_47 chr1:224692442-224692522 5.4e-05 47_[+5]_25 chr11:12710916-12710996 5.4e-05 26_[+5]_46 chr8:95772890-95772970 5.4e-05 29_[+5]_43 chr20:36021044-36021124 5.4e-05 30_[+5]_42 chr12:123867349-12386742 0.00013 61_[+5]_11 chr12:111395122-11139520 0.00013 45_[+5]_27 chr1:155036940-155037020 0.00013 44_[+5]_28 chr19:4298779-4298859 0.00013 38_[+5]_34 chr19:45767070-45767150 0.00013 32_[+5]_40 chr17:34077839-34077919 0.00013 53_[+5]_19 chr21:36956282-36956362 0.00013 40_[+5]_32 chr17:79283136-79283216 0.00015 72_[+5] chr9:101096708-101096788 0.00015 44_[+5]_28 chr1:165362404-165362484 0.00015 24_[+5]_48 chr1:28284297-28284377 0.00015 50_[+5]_22 chr1:95560562-95560642 0.00015 28_[+5]_44 chr3:72382091-72382171 0.00015 36_[+5]_36 chr11:47433168-47433248 0.00018 57_[+5]_15 chr12:116796860-11679694 0.00018 21_[+5]_51 chr17:62982206-62982286 0.00018 63_[+5]_9 chr1:15573530-15573610 0.00025 41_[+5]_31 chr5:138897983-138898063 0.00025 2_[+5]_70 chr11:44902643-44902723 0.00025 27_[+5]_45 chr19:10655213-10655293 0.00025 18_[+5]_54 chr10:99167589-99167669 0.00025 53_[+5]_19 chr9:133327037-133327117 0.00025 22_[+5]_50 chr17:77895375-77895455 0.00025 24_[+5]_48 chr3:193048760-193048840 0.00025 45_[+5]_27 chr6:157207626-157207706 0.00033 3_[+5]_69 chr5:149730197-149730277 0.00033 66_[+5]_6 chr21:46369794-46369874 0.0004 31_[+5]_41 chr6:155981862-155981942 0.0004 36_[+5]_36 chr9:130547123-130547203 0.0004 23_[+5]_49 chr1:15742849-15742929 0.0004 43_[+5]_29 chr11:12155604-12155684 0.0004 40_[+5]_32 chr16:22692238-22692318 0.0004 52_[+5]_20 chr22:44366070-44366150 0.00043 69_[+5]_3 chr6:44306421-44306501 0.0005 16_[+5]_56 chr10:130913030-13091311 0.0005 58_[+5]_14 chr5:38383146-38383226 0.0005 25_[+5]_47 chr12:11989989-11990069 0.00056 31_[+5]_41 chr10:120924970-12092505 0.00056 41_[+5]_31 chr16:3959199-3959279 0.00056 66_[+5]_6 chr15:31727615-31727695 0.00056 57_[+5]_15 chr19:4078359-4078439 0.00056 14_[+5]_58 chr19:45439229-45439309 0.00056 67_[+5]_5 chr3:4548939-4549019 0.00064 54_[+5]_18 chr3:50473675-50473755 0.00069 26_[+5]_46 chr10:49497911-49497991 0.00069 27_[+5]_45 chr17:73575170-73575250 0.00077 48_[+5]_24 chr6:164377783-164377863 0.00083 61_[+5]_11 chr16:88182757-88182837 0.00083 3_[+5]_69 chr6:42694446-42694526 0.00083 62_[+5]_10 chr1:23493960-23494040 0.00083 37_[+5]_35 chr1:93459786-93459866 0.00083 71_[+5]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTYMTCTG width=8 seqs=71 chr7:101331562-101331642 ( 71) CTCCTCTG 1 chr14:79075899-79075979 ( 66) CTCATCTG 1 chr11:33979017-33979097 ( 33) CTCATCTG 1 chr12:117484793-11748487 ( 61) CTCATCTG 1 chr16:85481002-85481082 ( 37) CTCATCTG 1 chr7:76038238-76038318 ( 39) CTCATCTG 1 chr1:2040779-2040859 ( 68) CTCATCTG 1 chr10:81206632-81206712 ( 60) CTCCTCTG 1 chr21:45279390-45279470 ( 67) CTCCTCTG 1 chr6:33821649-33821729 ( 44) CTCATCTG 1 chr10:72997226-72997306 ( 51) CTCATCTG 1 chr2:220405977-220406057 ( 41) CTCATCTG 1 chr5:172337909-172337989 ( 40) CTCATCTG 1 chr8:144360600-144360680 ( 23) CTTCTCTG 1 chr2:217157717-217157797 ( 27) CTTATCTG 1 chr1:28269700-28269780 ( 26) CTTATCTG 1 chr1:224692442-224692522 ( 48) CTTATCTG 1 chr11:12710916-12710996 ( 27) CTTATCTG 1 chr8:95772890-95772970 ( 30) CTTATCTG 1 chr20:36021044-36021124 ( 31) CTTCTCTG 1 chr12:123867349-12386742 ( 62) CCCATCTG 1 chr12:111395122-11139520 ( 46) CTCCCCTG 1 chr1:155036940-155037020 ( 45) CTCACCTG 1 chr19:4298779-4298859 ( 39) CCCATCTG 1 chr19:45767070-45767150 ( 33) CTCTTCTG 1 chr17:34077839-34077919 ( 54) CTCTTCTG 1 chr21:36956282-36956362 ( 41) CTCACCTG 1 chr17:79283136-79283216 ( 73) TTCCTCTG 1 chr9:101096708-101096788 ( 45) TTCCTCTG 1 chr1:165362404-165362484 ( 25) TTCCTCTG 1 chr1:28284297-28284377 ( 51) TTCATCTG 1 chr1:95560562-95560642 ( 29) TTCATCTG 1 chr3:72382091-72382171 ( 37) TTCATCTG 1 chr11:47433168-47433248 ( 58) GTCATCTG 1 chr12:116796860-11679694 ( 22) GTCCTCTG 1 chr17:62982206-62982286 ( 64) GTCCTCTG 1 chr1:15573530-15573610 ( 42) CCTATCTG 1 chr5:138897983-138898063 ( 3) CTTCCCTG 1 chr11:44902643-44902723 ( 28) CCTCTCTG 1 chr19:10655213-10655293 ( 19) CCTCTCTG 1 chr10:99167589-99167669 ( 54) CTTCCCTG 1 chr9:133327037-133327117 ( 23) CCTCTCTG 1 chr17:77895375-77895455 ( 25) CCTCTCTG 1 chr3:193048760-193048840 ( 46) CCTATCTG 1 chr6:157207626-157207706 ( 4) CTCTCCTG 1 chr5:149730197-149730277 ( 67) CTCTCCTG 1 chr21:46369794-46369874 ( 32) TCCCTCTG 1 chr6:155981862-155981942 ( 37) TCCATCTG 1 chr9:130547123-130547203 ( 24) TTCTTCTG 1 chr1:15742849-15742929 ( 44) TTCCCCTG 1 chr11:12155604-12155684 ( 41) TTCACCTG 1 chr16:22692238-22692318 ( 53) TCCATCTG 1 chr22:44366070-44366150 ( 70) GTTCTCTG 1 chr6:44306421-44306501 ( 17) GCCCTCTG 1 chr10:130913030-13091311 ( 59) GCCCTCTG 1 chr5:38383146-38383226 ( 26) GTCACCTG 1 chr12:11989989-11990069 ( 32) CCTCCCTG 1 chr10:120924970-12092505 ( 42) CCTCCCTG 1 chr16:3959199-3959279 ( 67) CCTTTCTG 1 chr15:31727615-31727695 ( 58) CTTTCCTG 1 chr19:4078359-4078439 ( 15) CTTTCCTG 1 chr19:45439229-45439309 ( 68) CCTCCCTG 1 chr3:4548939-4549019 ( 55) TTTCCCTG 1 chr3:50473675-50473755 ( 27) TTCTCCTG 1 chr10:49497911-49497991 ( 28) TCCTTCTG 1 chr17:73575170-73575250 ( 49) GTTCCCTG 1 chr6:164377783-164377863 ( 62) GCCCCCTG 1 chr16:88182757-88182837 ( 4) GTCTCCTG 1 chr6:42694446-42694526 ( 63) GCCCCCTG 1 chr1:23493960-23494040 ( 38) GCCTTCTG 1 chr1:93459786-93459866 ( 72) GCCACCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.39859 E= 4.3e-011 -1279 127 -53 -16 -1279 30 -1279 154 -1279 140 -1279 51 77 70 -1279 -49 -1279 30 -1279 154 -1279 199 -1279 -1279 -1279 -1279 -1279 208 -1279 -1279 192 -1279 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 71 E= 4.3e-011 0.000000 0.605634 0.183099 0.211268 0.000000 0.309859 0.000000 0.690141 0.000000 0.661972 0.000000 0.338028 0.422535 0.408451 0.000000 0.169014 0.000000 0.309859 0.000000 0.690141 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTYMTCTG MEME-5 regular expression -------------------------------------------------------------------------------- [CT][TC][CT][AC][TC]CTG -------------------------------------------------------------------------------- Time 18.08 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:36956282-36956362 2.26e-05 5_[+2(1.45e-05)]_4_[+2(1.45e-05)]_\ 23_[+4(1.65e-05)]_24 chr22:30122885-30122965 3.95e-05 11_[+3(6.40e-05)]_10_[+4(9.95e-05)]_\ 7_[+1(1.59e-05)]_28 chr16:22692238-22692318 2.11e-05 20_[+2(1.45e-05)]_15_[+3(5.09e-05)]_\ 29 chr5:172337909-172337989 1.29e-06 1_[+2(1.45e-05)]_30_[+5(2.77e-05)]_\ 1_[+4(1.65e-05)]_24 chr1:102900173-102900253 1.30e-03 4_[+1(1.59e-05)]_3_[+2(8.52e-05)]_\ 22_[+1(1.59e-05)]_27 chr2:220405977-220406057 5.62e-05 16_[+2(4.13e-05)]_16_[+5(2.77e-05)]_\ 1_[+4(6.62e-05)]_23 chr9:35193913-35193993 2.53e-03 9_[+2(1.45e-05)]_22_[+1(8.28e-05)]_\ 3_[+2(1.45e-05)]_22 chr9:95748625-95748705 3.17e-04 41_[+2(1.45e-05)]_31 chr12:102942483-10294256 4.22e-03 37_[+2(1.45e-05)]_35 chr19:45439229-45439309 1.04e-01 80 chr2:63528149-63528229 1.85e-03 19_[+1(1.59e-05)]_3_[+2(8.52e-05)]_\ 22_[+1(1.59e-05)]_12 chr16:48417897-48417977 1.13e-03 27_[+3(1.24e-05)]_37_[+1(1.59e-05)] chr7:29838185-29838265 3.09e-04 22_[+2(1.45e-05)]_7_[+1(1.59e-05)]_\ 35 chr12:56696251-56696331 1.03e-01 30_[+2(1.45e-05)]_42 chr10:72997226-72997306 2.38e-06 16_[+2(8.52e-05)]_26_[+5(2.77e-05)]_\ 1_[+4(8.38e-05)]_13 chr1:120923095-120923175 2.74e-03 64_[+2(1.45e-05)]_8 chr7:73768511-73768591 2.06e-03 1_[+3(1.24e-05)]_71 chr3:72382091-72382171 3.34e-04 45_[+4(1.65e-05)]_27 chr2:20335532-20335612 4.10e-01 80 chr1:220543011-220543091 1.91e-05 3_[+2(1.45e-05)]_6_[+2(9.88e-05)]_\ 23_[+4(1.65e-05)]_24 chr20:48328791-48328871 1.07e-04 25_[+3(1.24e-05)]_34_[+1(1.59e-05)]_\ 5 chr11:65836616-65836696 2.88e-01 80 chr20:36021044-36021124 1.63e-05 6_[+2(1.45e-05)]_16_[+5(5.39e-05)]_\ 42 chrX:53406076-53406156 5.30e-05 24_[+3(1.24e-05)]_10_[+4(9.95e-05)]_\ 5_[+1(3.26e-05)]_17 chr3:193048760-193048840 1.82e-06 22_[+2(4.13e-05)]_24_[+4(1.65e-05)]_\ 18 chr17:77895375-77895455 4.87e-06 2_[+2(1.45e-05)]_44_[+4(1.65e-05)]_\ 18 chr19:42924270-42924350 3.59e-02 80 chr19:52846968-52847048 2.38e-02 80 chr20:32889549-32889629 1.77e-02 80 chr11:12155604-12155684 3.30e-06 17_[+2(4.13e-05)]_6_[+3(5.09e-05)]_\ 10_[+4(1.65e-05)]_23 chr6:33821649-33821729 5.11e-09 11_[+2(1.45e-05)]_15_[+3(5.09e-05)]_\ 1_[+5(2.77e-05)]_1_[+4(1.65e-05)]_20 chr3:5226849-5226929 3.86e-02 37_[+3(1.24e-05)]_35 chr19:46143360-46143440 2.34e-02 37_[+2(1.45e-05)]_4_[+2(8.52e-05)]_\ 23 chr1:31627446-31627526 9.03e-02 80 chr4:1505825-1505905 1.99e-02 80 chr12:6561768-6561848 8.34e-05 38_[+2(1.45e-05)]_25_[+4(6.62e-05)]_\ 1 chr14:77424584-77424664 2.82e-05 24_[+3(1.24e-05)]_11_[+4(9.95e-05)]_\ 17_[+1(1.59e-05)]_4 chr19:43809979-43810059 4.18e-02 52_[+2(4.13e-05)]_20 chrX:37539317-37539397 3.55e-03 72_[+1(1.59e-05)] chr11:63913642-63913722 7.69e-03 3_[+1(8.28e-05)]_15_[+1(1.59e-05)]_\ 46 chr6:34165623-34165703 1.40e-02 50_[+2(1.45e-05)]_22 chr20:55850101-55850181 1.60e-02 22_[+3(6.40e-05)]_50 chr1:95560562-95560642 1.91e-02 80 chr21:45279390-45279470 2.39e-03 29_[+2(1.45e-05)]_29_[+5(2.77e-05)]_\ 6 chrX:26801787-26801867 1.42e-03 47_[+1(8.28e-05)]_3_[+2(1.45e-05)]_\ 14 chr1:93459786-93459866 5.22e-03 25_[+2(1.45e-05)]_47 chr11:57175563-57175643 2.12e-02 26_[+3(6.40e-05)]_46 chr17:77023779-77023859 1.15e-02 36_[+1(1.59e-05)]_36 chr6:154801393-154801473 1.74e-03 72_[+1(1.59e-05)] chr2:16938554-16938634 1.79e-03 26_[+1(8.28e-05)]_6_[+2(4.13e-05)]_\ 32 chr7:104924637-104924717 9.22e-04 36_[+1(1.59e-05)]_15_[+1(6.51e-05)]_\ 13 chr9:133327037-133327117 1.10e-03 1_[+2(1.45e-05)]_71 chr10:81206632-81206712 2.90e-05 59_[+5(2.77e-05)]_1_[+4(1.65e-05)]_\ 4 chr16:70234131-70234211 4.66e-04 20_[+3(1.24e-05)]_22_[+1(8.28e-05)]_\ 22 chr10:30783174-30783254 1.84e-03 19_[+1(9.94e-05)]_23_[+2(1.45e-05)]_\ 22 chr21:38422210-38422290 4.30e-02 47_[+1(1.59e-05)]_25 chr1:2040779-2040859 1.01e-05 45_[+2(1.45e-05)]_5_[+3(5.09e-05)]_\ 1_[+5(2.77e-05)]_5 chr1:33221222-33221302 1.50e-02 44_[+1(1.59e-05)]_28 chr12:52366357-52366437 5.53e-04 57_[+1(1.59e-05)]_15 chr8:95772890-95772970 1.20e-04 29_[+5(5.39e-05)]_2_[+1(1.59e-05)]_\ 33 chr7:76038238-76038318 2.37e-05 9_[+2(4.13e-05)]_21_[+5(2.77e-05)]_\ 34 chr3:196753011-196753091 3.74e-03 55_[+1(1.59e-05)]_17 chr11:12710916-12710996 1.13e-04 26_[+5(5.39e-05)]_2_[+2(1.45e-05)]_\ 36 chr17:73575170-73575250 5.08e-03 65_[+1(1.59e-05)]_7 chr11:66607968-66608048 1.58e-03 7_[+3(7.63e-05)]_19_[+2(1.45e-05)]_\ 38 chr5:38383146-38383226 3.66e-04 40_[+2(1.45e-05)]_32 chr16:29986621-29986701 6.20e-04 19_[+3(1.24e-05)]_34_[+1(1.59e-05)]_\ 11 chr12:46121815-46121895 2.74e-02 30_[+2(1.45e-05)]_42 chr9:99846853-99846933 3.34e-03 39_[+1(3.26e-05)]_33 chr8:12006467-12006547 3.71e-02 62_[+1(1.59e-05)]_10 chr12:104917268-10491734 3.11e-02 56_[+2(4.13e-05)]_16 chr22:20253434-20253514 2.40e-02 39_[+1(1.59e-05)]_33 chr12:46650311-46650391 2.48e-02 19_[+1(1.59e-05)]_6_[+1(9.94e-05)]_\ 39 chr20:55623385-55623465 1.70e-02 39_[+2(1.45e-05)]_33 chr17:62982206-62982286 7.78e-03 80 chr20:32297335-32297415 8.37e-05 37_[+4(9.95e-05)]_7_[+2(4.13e-05)]_\ 1_[+1(1.59e-05)]_11 chr2:96926322-96926402 1.54e-04 20_[+1(1.59e-05)]_52 chr20:48760584-48760664 2.18e-03 29_[+3(6.40e-05)]_26_[+1(1.59e-05)]_\ 9 chr6:165463016-165463096 1.85e-03 12_[+1(1.59e-05)]_3_[+2(8.52e-05)]_\ 22_[+1(1.59e-05)]_19 chr1:17799466-17799546 1.86e-02 80 chr3:128176350-128176430 3.87e-04 [+3(5.09e-05)]_10_[+4(1.65e-05)]_54 chr5:148426113-148426193 6.42e-03 49_[+1(1.59e-05)]_23 chr12:98972732-98972812 2.29e-01 80 chr16:3704427-3704507 4.70e-01 80 chr3:183354513-183354593 1.12e-01 80 chr12:54343538-54343618 3.06e-01 80 chr1:224692442-224692522 4.07e-07 4_[+2(1.45e-05)]_12_[+2(9.88e-05)]_\ 6_[+3(5.09e-05)]_1_[+5(5.39e-05)]_1_[+4(6.62e-05)]_16 chr19:4078359-4078439 5.58e-03 39_[+4(8.38e-05)]_33 chr1:23493960-23494040 3.61e-01 80 chr1:15742849-15742929 3.27e-02 80 chr17:34077839-34077919 5.32e-07 21_[+2(1.45e-05)]_15_[+3(5.09e-05)]_\ 10_[+4(1.65e-05)]_10 chr17:3821022-3821102 5.36e-01 80 chr4:123696398-123696478 3.23e-02 47_[+1(3.26e-05)]_25 chr11:16034121-16034201 6.87e-03 29_[+4(6.62e-05)]_10_[+1(3.26e-05)]_\ 25 chr17:79027222-79027302 2.39e-03 52_[+1(3.26e-05)]_6_[+1(9.94e-05)]_\ 6 chr7:148272915-148272995 1.14e-02 44_[+1(1.59e-05)]_28 chr10:51575271-51575351 6.99e-02 13_[+1(1.59e-05)]_59 chr12:120554003-12055408 1.04e-04 71_[+1(1.59e-05)]_1 chr22:44366070-44366150 9.56e-03 80 chr12:116796860-11679694 1.98e-02 40_[+2(9.88e-05)]_32 chr15:51413415-51413495 2.41e-02 36_[+1(1.59e-05)]_36 chr20:48842760-48842840 4.06e-03 10_[+4(9.95e-05)]_21_[+1(1.59e-05)]_\ 33 chr15:31727615-31727695 8.56e-03 13_[+1(1.59e-05)]_59 chr20:48693341-48693421 2.48e-04 22_[+1(1.59e-05)]_38_[+2(1.45e-05)]_\ 4 chr8:95968324-95968404 1.79e-03 28_[+4(1.65e-05)]_44 chr10:49497911-49497991 2.14e-04 41_[+2(1.45e-05)]_31 chr11:86902162-86902242 7.53e-02 80 chr20:56039871-56039951 1.03e-01 17_[+2(1.45e-05)]_10_[+2(1.45e-05)]_\ 10_[+2(1.45e-05)]_10_[+2(1.45e-05)]_1 chr2:27979889-27979969 3.47e-02 52_[+1(1.59e-05)]_20 chr10:99167589-99167669 2.79e-04 29_[+2(1.45e-05)]_27_[+3(5.09e-05)]_\ 8 chr15:93421859-93421939 6.07e-02 80 chr19:10655213-10655293 6.47e-04 27_[+4(1.65e-05)]_45 chr19:45767070-45767150 2.40e-03 80 chr17:25871727-25871807 4.78e-01 80 chr16:85481002-85481082 5.69e-04 36_[+5(2.77e-05)]_36 chr19:30137107-30137187 1.99e-01 80 chr5:171541021-171541101 9.36e-03 44_[+3(1.24e-05)]_28 chr7:30199607-30199687 1.36e-02 9_[+2(1.45e-05)]_49_[+2(1.45e-05)]_\ 6 chr6:36586851-36586931 7.42e-03 23_[+1(1.59e-05)]_49 chr16:3959199-3959279 8.11e-04 41_[+1(1.59e-05)]_31 chr12:117484793-11748487 2.32e-07 18_[+2(1.45e-05)]_14_[+5(5.39e-05)]_\ 3_[+3(5.09e-05)]_1_[+5(2.77e-05)]_1_[+4(6.62e-05)]_3 chr5:126852977-126853057 5.84e-01 80 chrX:124573226-124573306 2.87e-03 21_[+1(8.28e-05)]_3_[+2(1.45e-05)]_\ 40 chr3:42043461-42043541 1.32e-01 80 chr1:28269700-28269780 4.36e-05 25_[+5(5.39e-05)]_1_[+4(8.38e-05)]_\ 38 chr20:52239123-52239203 1.22e-04 18_[+3(6.40e-05)]_32_[+2(4.13e-05)]_\ 1_[+1(3.26e-05)]_5 chr10:13157928-13158008 5.58e-02 8_[+2(9.88e-05)]_64 chr22:42253722-42253802 3.53e-02 80 chr1:25279216-25279296 1.20e-01 80 chr7:154813486-154813566 2.76e-02 80 chr2:38861952-38862032 4.27e-05 8_[+2(2.75e-05)]_44_[+1(1.59e-05)]_\ 12 chr2:47500448-47500528 2.73e-03 [+1(9.94e-05)]_40_[+2(1.45e-05)]_1_\ [+2(1.45e-05)]_15 chr1:46987302-46987382 7.34e-04 58_[+4(8.38e-05)]_14 chr18:44497932-44498012 5.70e-05 47_[+2(1.45e-05)]_10_[+1(3.26e-05)]_\ 7 chr15:64385349-64385429 3.66e-02 32_[+2(1.45e-05)]_40 chr19:4298779-4298859 7.61e-04 8_[+1(3.26e-05)]_64 chr1:30161566-30161646 4.24e-02 47_[+1(8.28e-05)]_25 chr19:17355614-17355694 8.87e-02 40_[+1(3.26e-05)]_32 chr1:27483795-27483875 9.64e-02 42_[+1(1.59e-05)]_30 chr12:114122580-11412266 1.75e-02 50_[+1(3.26e-05)]_22 chr12:117443395-11744347 1.45e-02 21_[+2(1.45e-05)]_51 chr1:33562872-33562952 4.58e-01 80 chr7:150103619-150103699 8.44e-04 23_[+2(1.45e-05)]_24_[+3(5.09e-05)]_\ 17 chr14:70119738-70119818 2.07e-05 14_[+3(1.24e-05)]_43_[+1(1.59e-05)]_\ 7 chr10:130913030-13091311 1.52e-03 68_[+2(1.45e-05)]_4 chr14:61805350-61805430 2.34e-02 42_[+2(1.45e-05)]_3_[+2(1.45e-05)]_\ 19 chr3:10067576-10067656 7.77e-03 80 chr2:65086608-65086688 2.32e-02 7_[+2(1.45e-05)]_65 chr11:71144640-71144720 6.86e-03 32_[+1(3.26e-05)]_40 chr11:44902643-44902723 5.78e-06 5_[+2(1.45e-05)]_43_[+4(6.62e-05)]_\ 16 chr6:35455572-35455652 2.34e-03 39_[+1(1.59e-05)]_33 chr4:99609754-99609834 1.23e-02 60_[+2(1.45e-05)]_12 chr1:19908860-19908940 2.52e-04 27_[+1(1.59e-05)]_45 chr1:167903189-167903269 4.62e-04 12_[+3(1.24e-05)]_33_[+1(1.59e-05)]_\ 19 chr17:4110428-4110508 9.75e-01 80 chr5:171545143-171545223 1.20e-04 5_[+3(1.24e-05)]_43_[+1(1.59e-05)]_\ 16 chr11:9780493-9780573 2.44e-03 49_[+1(1.59e-05)]_23 chr1:43476795-43476875 8.10e-03 3_[+2(1.45e-05)]_69 chr12:109548834-10954891 1.71e-01 80 chr5:138897983-138898063 6.76e-02 80 chr3:4548939-4549019 2.88e-04 43_[+2(1.45e-05)]_29 chr16:70007001-70007081 4.66e-04 17_[+3(1.24e-05)]_22_[+1(8.28e-05)]_\ 25 chr20:328604-328684 2.15e-03 7_[+1(1.59e-05)]_65 chr2:217157717-217157797 7.41e-04 26_[+5(5.39e-05)]_24_[+2(4.13e-05)]_\ 14 chr17:3892201-3892281 1.93e-01 24_[+1(1.59e-05)]_16_[+1(1.59e-05)]_\ 4_[+1(1.59e-05)]_12 chr6:44306421-44306501 1.87e-03 70_[+2(2.75e-05)]_2 chr1:28284297-28284377 4.53e-05 59_[+4(1.65e-05)]_13 chr11:33979017-33979097 3.95e-06 7_[+2(1.45e-05)]_8_[+3(5.09e-05)]_1_\ [+5(2.77e-05)]_40 chr9:95871633-95871713 1.45e-03 61_[+2(1.45e-05)]_11 chr6:42694446-42694526 6.34e-03 [+2(1.45e-05)]_72 chr18:832291-832371 4.63e-02 80 chr4:166396074-166396154 1.16e-03 33_[+2(1.45e-05)]_39 chr11:63299082-63299162 2.75e-02 80 chr11:64072280-64072360 8.37e-02 23_[+2(4.13e-05)]_15_[+2(4.13e-05)]_\ 15_[+2(1.45e-05)]_3 chr10:11954577-11954657 3.76e-02 41_[+1(1.59e-05)]_31 chr19:46917807-46917887 8.75e-03 44_[+4(9.95e-05)]_3_[+1(9.94e-05)]_\ 17 chr20:33292482-33292562 1.82e-01 80 chr2:43572077-43572157 6.91e-04 14_[+1(8.28e-05)]_14_[+2(1.45e-05)]_\ 36 chr11:3425496-3425576 3.19e-02 80 chr2:169660786-169660866 1.74e-05 21_[+2(7.05e-05)]_11_[+1(3.26e-05)]_\ 32 chr8:144360600-144360680 2.47e-03 22_[+5(5.39e-05)]_50 chr10:120924970-12092505 1.91e-01 80 chr3:14294452-14294532 7.42e-02 19_[+1(3.26e-05)]_53 chr7:105408692-105408772 4.64e-04 9_[+2(9.88e-05)]_63 chr1:15573530-15573610 2.58e-04 50_[+4(6.62e-05)]_22 chr12:93735366-93735446 2.56e-05 3_[+3(1.24e-05)]_10_[+4(9.95e-05)]_\ 16_[+1(1.59e-05)]_27 chr10:27847618-27847698 1.54e-04 56_[+1(3.26e-05)]_16 chr17:1553266-1553346 1.81e-03 35_[+1(1.59e-05)]_37 chr17:36500407-36500487 8.59e-04 23_[+3(6.40e-05)]_25_[+1(1.59e-05)]_\ 16 chr20:33463720-33463800 7.31e-02 52_[+1(1.59e-05)]_20 chr12:11989989-11990069 7.65e-04 59_[+1(1.59e-05)]_13 chr3:49195693-49195773 1.15e-01 57_[+1(6.51e-05)]_15 chr17:7370337-7370417 1.90e-03 34_[+1(3.26e-05)]_38 chr1:165362404-165362484 1.42e-01 80 chr7:44835817-44835897 1.51e-01 80 chr10:121059172-12105925 3.83e-02 43_[+2(8.52e-05)]_29 chr1:32879653-32879733 1.28e-02 38_[+2(7.05e-05)]_34 chr5:149730197-149730277 1.18e-02 22_[+2(1.45e-05)]_50 chr7:99750228-99750308 9.07e-02 68_[+1(9.94e-05)]_4 chr1:38757899-38757979 1.46e-02 80 chr19:30302253-30302333 4.46e-02 47_[+2(1.45e-05)]_25 chr9:130547123-130547203 1.18e-03 32_[+4(1.65e-05)]_40 chr3:187397507-187397587 2.06e-04 17_[+1(1.59e-05)]_55 chr1:155036940-155037020 2.65e-04 22_[+2(4.13e-05)]_50 chrX:65146225-65146305 1.91e-01 43_[+1(8.28e-05)]_29 chr15:70731652-70731732 2.85e-04 2_[+3(1.24e-05)]_34_[+1(1.59e-05)]_\ 28 chr10:46046470-46046550 2.85e-03 32_[+3(1.24e-05)]_40 chr5:49738-49818 6.85e-01 80 chr6:155981862-155981942 8.74e-05 1_[+2(1.45e-05)]_36_[+4(1.65e-05)]_\ 27 chr2:118228069-118228149 1.94e-03 15_[+1(8.28e-05)]_35_[+1(8.28e-05)]_\ 5_[+2(1.45e-05)]_1 chr19:3434714-3434794 1.42e-03 10_[+3(3.78e-05)]_10_[+4(1.65e-05)]_\ 44 chr14:79075899-79075979 1.49e-04 41_[+2(1.45e-05)]_2_[+2(4.13e-05)]_\ 6_[+5(2.77e-05)]_7 chr3:8744409-8744489 2.49e-01 80 chr4:52717971-52718051 2.09e-03 54_[+1(1.59e-05)]_18 chr16:84641413-84641493 1.20e-01 54_[+1(1.59e-05)]_18 chr12:122155067-12215514 8.30e-02 11_[+1(3.26e-05)]_10_[+1(8.28e-05)]_\ 43 chr1:150480399-150480479 1.47e-03 80 chr12:111395122-11139520 2.73e-04 3_[+2(1.45e-05)]_69 chr3:53290311-53290391 2.34e-05 36_[+3(1.24e-05)]_10_[+4(9.95e-05)]_\ 6_[+1(8.28e-05)]_4 chr21:44596914-44596994 3.34e-03 49_[+1(6.51e-05)]_23 chr16:81550674-81550754 5.44e-02 11_[+1(1.59e-05)]_61 chr7:101554808-101554888 5.01e-02 16_[+2(1.45e-05)]_31_[+2(1.45e-05)]_\ 17 chr15:67189095-67189175 3.56e-03 28_[+1(1.59e-05)]_44 chr10:71892620-71892700 9.98e-01 80 chr16:692329-692409 8.77e-01 80 chr11:57297815-57297895 1.38e-03 20_[+3(6.40e-05)]_10_[+4(9.95e-05)]_\ 34 chr5:175970602-175970682 2.85e-02 80 chr3:49172014-49172094 4.13e-02 36_[+1(1.59e-05)]_36 chr9:101096708-101096788 1.02e-04 62_[+4(1.65e-05)]_10 chr3:50473675-50473755 5.85e-03 66_[+1(1.59e-05)]_6 chr12:123867349-12386742 1.92e-05 20_[+2(1.45e-05)]_42_[+4(1.65e-05)]_\ 2 chr22:39695912-39695992 2.52e-03 60_[+1(1.59e-05)]_12 chr16:88182757-88182837 9.75e-03 80 chr10:133865765-13386584 5.34e-03 53_[+2(1.45e-05)]_19 chr6:157207626-157207706 1.68e-03 33_[+2(7.05e-05)]_39 chr10:73196291-73196371 1.12e-04 53_[+4(1.65e-05)]_19 chr5:141071518-141071598 1.56e-04 3_[+3(1.24e-05)]_34_[+1(1.59e-05)]_\ 27 chr7:101331562-101331642 1.47e-02 70_[+5(2.77e-05)]_2 chr11:119223647-11922372 5.32e-02 49_[+1(1.59e-05)]_23 chr6:164377783-164377863 5.61e-02 12_[+2(9.88e-05)]_60 chr11:47433168-47433248 2.52e-04 66_[+1(1.59e-05)]_6 chr10:108785617-10878569 6.55e-02 72_[+1(3.26e-05)] chr15:58838973-58839053 2.43e-02 56_[+2(4.13e-05)]_16 chr14:71920889-71920969 2.13e-02 80 chr16:69206794-69206874 1.50e-02 80 chrX:41301719-41301799 2.71e-02 14_[+2(2.75e-05)]_58 chr17:55749431-55749511 3.49e-03 80 chr21:46369794-46369874 9.79e-03 80 chr2:242089421-242089501 3.97e-02 80 chr17:79283136-79283216 1.31e-03 10_[+2(2.75e-05)]_62 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************