******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ELK1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr19:34742703-34742783 1.0000 80 chr12:50616459-50616539 1.0000 80 chr12:12506875-12506955 1.0000 80 chr19:52184972-52185052 1.0000 80 chr10:73291460-73291540 1.0000 80 chr10:124895425-12489550 1.0000 80 chr5:169730276-169730356 1.0000 80 chr8:99617736-99617816 1.0000 80 chr17:41132112-41132192 1.0000 80 chr8:22552893-22552973 1.0000 80 chr6:68595723-68595803 1.0000 80 chr20:35787857-35787937 1.0000 80 chr14:75760968-75761048 1.0000 80 chr5:139641076-139641156 1.0000 80 chr11:76758784-76758864 1.0000 80 chr10:64576430-64576510 1.0000 80 chr5:119848668-119848748 1.0000 80 chr5:133450195-133450275 1.0000 80 chr5:137827830-137827910 1.0000 80 chr10:48402465-48402545 1.0000 80 chr9:33165892-33165972 1.0000 80 chr17:79428118-79428198 1.0000 80 chr7:73548737-73548817 1.0000 80 chr19:19256963-19257043 1.0000 80 chr7:130756926-130757006 1.0000 80 chr11:61872733-61872813 1.0000 80 chr6:15896145-15896225 1.0000 80 chr6:126240288-126240368 1.0000 80 chr8:42270484-42270564 1.0000 80 chr1:203259757-203259837 1.0000 80 chr8:110391470-110391550 1.0000 80 chr11:65477372-65477452 1.0000 80 chr21:34753049-34753129 1.0000 80 chr1:86042701-86042781 1.0000 80 chr7:157100704-157100784 1.0000 80 chr12:833750-833830 1.0000 80 chr19:55166485-55166565 1.0000 80 chr7:2119369-2119449 1.0000 80 chr11:95976499-95976579 1.0000 80 chr1:52137692-52137772 1.0000 80 chr5:125849906-125849986 1.0000 80 chr10:6186820-6186900 1.0000 80 chr19:40926879-40926959 1.0000 80 chr5:137800766-137800846 1.0000 80 chr7:12787589-12787669 1.0000 80 chr10:112257556-11225763 1.0000 80 chr22:41260175-41260255 1.0000 80 chr20:49955283-49955363 1.0000 80 chr3:45103633-45103713 1.0000 80 chr14:74227013-74227093 1.0000 80 chr2:55361171-55361251 1.0000 80 chr12:52445110-52445190 1.0000 80 chr6:841685-841765 1.0000 80 chr1:26034733-26034813 1.0000 80 chr6:158402531-158402611 1.0000 80 chr1:26963150-26963230 1.0000 80 chr20:61023288-61023368 1.0000 80 chr1:43222782-43222862 1.0000 80 chr17:53894871-53894951 1.0000 80 chr20:626286-626366 1.0000 80 chr1:159047115-159047195 1.0000 80 chr19:42829587-42829667 1.0000 80 chr5:74532783-74532863 1.0000 80 chr9:88969311-88969391 1.0000 80 chr19:50169078-50169158 1.0000 80 chr9:130981128-130981208 1.0000 80 chr17:16189437-16189517 1.0000 80 chr19:50819466-50819546 1.0000 80 chr19:50876301-50876381 1.0000 80 chr19:50878139-50878219 1.0000 80 chr19:17001455-17001535 1.0000 80 chr1:169278661-169278741 1.0000 80 chr1:28995168-28995248 1.0000 80 chr2:187440140-187440220 1.0000 80 chr22:21983637-21983717 1.0000 80 chr1:229416455-229416535 1.0000 80 chr10:16859445-16859525 1.0000 80 chr1:100232144-100232224 1.0000 80 chrX:18693082-18693162 1.0000 80 chr10:72124400-72124480 1.0000 80 chr11:126350733-12635081 1.0000 80 chr1:11967904-11967984 1.0000 80 chr5:67730242-67730322 1.0000 80 chr6:28129480-28129560 1.0000 80 chrX:15873125-15873205 1.0000 80 chr4:10118472-10118552 1.0000 80 chr19:14800814-14800894 1.0000 80 chr1:36181227-36181307 1.0000 80 chr8:98775170-98775250 1.0000 80 chr7:6746598-6746678 1.0000 80 chr9:77567830-77567910 1.0000 80 chr2:145338316-145338396 1.0000 80 chr14:70163770-70163850 1.0000 80 chr7:97884730-97884810 1.0000 80 chr22:31480916-31480996 1.0000 80 chr12:498451-498531 1.0000 80 chr14:56665962-56666042 1.0000 80 chr19:1174247-1174327 1.0000 80 chr4:184270280-184270360 1.0000 80 chr3:21084782-21084862 1.0000 80 chr10:16478964-16479044 1.0000 80 chr18:12904071-12904151 1.0000 80 chr19:13262665-13262745 1.0000 80 chr2:208637330-208637410 1.0000 80 chr3:100428094-100428174 1.0000 80 chr6:147208465-147208545 1.0000 80 chr17:80606276-80606356 1.0000 80 chr22:27068933-27069013 1.0000 80 chr16:3661694-3661774 1.0000 80 chr13:115079776-11507985 1.0000 80 chrX:13752805-13752885 1.0000 80 chr20:55407676-55407756 1.0000 80 chr12:9917418-9917498 1.0000 80 chr6:164759138-164759218 1.0000 80 chr11:108093717-10809379 1.0000 80 chr1:174933690-174933770 1.0000 80 chr17:43394622-43394702 1.0000 80 chr4:88480837-88480917 1.0000 80 chr19:597839-597919 1.0000 80 chr11:59315371-59315451 1.0000 80 chr12:56401163-56401243 1.0000 80 chr9:131218252-131218332 1.0000 80 chr3:171180168-171180248 1.0000 80 chr11:64764563-64764643 1.0000 80 chr19:12904419-12904499 1.0000 80 chr6:138170655-138170735 1.0000 80 chr14:23564657-23564737 1.0000 80 chr17:77784004-77784084 1.0000 80 chr5:176882482-176882562 1.0000 80 chr20:46020849-46020929 1.0000 80 chr7:100861324-100861404 1.0000 80 chr7:154795722-154795802 1.0000 80 chr8:53627040-53627120 1.0000 80 chr2:106015501-106015581 1.0000 80 chr8:145137492-145137572 1.0000 80 chr8:145980979-145981059 1.0000 80 chr9:19049319-19049399 1.0000 80 chr22:21213169-21213249 1.0000 80 chr17:79791168-79791248 1.0000 80 chr12:110562102-11056218 1.0000 80 chr8:146228262-146228342 1.0000 80 chr19:16296008-16296088 1.0000 80 chr22:36851246-36851326 1.0000 80 chr12:56320929-56321009 1.0000 80 chr20:45386839-45386919 1.0000 80 chr20:62284659-62284739 1.0000 80 chr3:42922556-42922636 1.0000 80 chr22:29949759-29949839 1.0000 80 chr3:32090499-32090579 1.0000 80 chr8:103404224-103404304 1.0000 80 chr11:57282307-57282387 1.0000 80 chr11:35364890-35364970 1.0000 80 chr11:67030321-67030401 1.0000 80 chrX:117479869-117479949 1.0000 80 chr19:597638-597718 1.0000 80 chr5:34839189-34839269 1.0000 80 chr1:247275221-247275301 1.0000 80 chr8:91013191-91013271 1.0000 80 chr14:75745241-75745321 1.0000 80 chr11:100885790-10088587 1.0000 80 chr11:506823-506903 1.0000 80 chr17:40086831-40086911 1.0000 80 chr5:79703689-79703769 1.0000 80 chr19:12900743-12900823 1.0000 80 chr3:37865749-37865829 1.0000 80 chr11:111849271-11184935 1.0000 80 chr2:55746687-55746767 1.0000 80 chr10:93683469-93683549 1.0000 80 chr2:74734789-74734869 1.0000 80 chr9:130186607-130186687 1.0000 80 chr8:145638933-145639013 1.0000 80 chr19:13949954-13950034 1.0000 80 chr7:6769330-6769410 1.0000 80 chr16:25118436-25118516 1.0000 80 chr21:46293603-46293683 1.0000 80 chr19:17033031-17033111 1.0000 80 chr6:21987839-21987919 1.0000 80 chr1:45657003-45657083 1.0000 80 chr2:86669937-86670017 1.0000 80 chr12:123868270-12386835 1.0000 80 chr6:43138913-43138993 1.0000 80 chr10:11936695-11936775 1.0000 80 chr1:55230353-55230433 1.0000 80 chr19:4182541-4182621 1.0000 80 chr2:220110176-220110256 1.0000 80 chr2:234160178-234160258 1.0000 80 chr2:237994458-237994538 1.0000 80 chr11:17281630-17281710 1.0000 80 chr5:443201-443281 1.0000 80 chr6:90348418-90348498 1.0000 80 chr13:111365354-11136543 1.0000 80 chr1:40506343-40506423 1.0000 80 chr17:41755425-41755505 1.0000 80 chr9:139294636-139294716 1.0000 80 chrX:153626441-153626521 1.0000 80 chr6:151550557-151550637 1.0000 80 chr8:59323818-59323898 1.0000 80 chr18:39535067-39535147 1.0000 80 chrX:48815616-48815696 1.0000 80 chr19:57901063-57901143 1.0000 80 chr21:36118008-36118088 1.0000 80 chr11:11832443-11832523 1.0000 80 chr7:111846530-111846610 1.0000 80 chr4:140216966-140217046 1.0000 80 chr16:70557427-70557507 1.0000 80 chr3:124620298-124620378 1.0000 80 chr15:40615727-40615807 1.0000 80 chr6:153323843-153323923 1.0000 80 chr14:57735642-57735722 1.0000 80 chr2:238875577-238875657 1.0000 80 chr9:35103152-35103232 1.0000 80 chr22:22020493-22020573 1.0000 80 chr11:69197237-69197317 1.0000 80 chr9:115308572-115308652 1.0000 80 chr19:8645796-8645876 1.0000 80 chr12:122681637-12268171 1.0000 80 chr16:89724079-89724159 1.0000 80 chr1:222484323-222484403 1.0000 80 chr15:91191941-91192021 1.0000 80 chr3:38178866-38178946 1.0000 80 chr4:25378828-25378908 1.0000 80 chr3:58045568-58045648 1.0000 80 chr19:633593-633673 1.0000 80 chr16:70333036-70333116 1.0000 80 chr17:65362692-65362772 1.0000 80 chr3:169482149-169482229 1.0000 80 chr1:38273837-38273917 1.0000 80 chr20:49347596-49347676 1.0000 80 chr8:146012747-146012827 1.0000 80 chr9:131644302-131644382 1.0000 80 chr2:183989030-183989110 1.0000 80 chr10:43633845-43633925 1.0000 80 chr12:122125034-12212511 1.0000 80 chr19:16653286-16653366 1.0000 80 chr7:38895606-38895686 1.0000 80 chr19:4457886-4457966 1.0000 80 chr5:158690220-158690300 1.0000 80 chr1:154976629-154976709 1.0000 80 chr7:5085396-5085476 1.0000 80 chr6:70506707-70506787 1.0000 80 chr5:1345188-1345268 1.0000 80 chr20:43104497-43104577 1.0000 80 chr7:92077821-92077901 1.0000 80 chr7:75157478-75157558 1.0000 80 chr6:27447498-27447578 1.0000 80 chr19:8578760-8578840 1.0000 80 chr7:44084197-44084277 1.0000 80 chr13:111805951-11180603 1.0000 80 chr12:56584072-56584152 1.0000 80 chr6:97345836-97345916 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ELK1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ELK1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.2 C 0.295 G 0.306 T 0.199 Background letter frequencies (from file dataset with add-one prior applied): A 0.2 C 0.295 G 0.306 T 0.199 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCGGAAGT MEME-1 width = 8 sites = 133 llr = 1171 E-value = 1.1e-164 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :2::aa1: pos.-specific C 98:::::2 probability G 1:aa::9: matrix T :::::::8 bits 2.3 * 2.1 ** 1.9 ** 1.6 **** Relative 1.4 **** * Entropy 1.2 ******** (12.7 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCGGAAGT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:8578760-8578840 17 1.98e-05 CGGGCCGGGC CCGGAAGT AGGGCGCTCT chr7:75157478-75157558 36 1.98e-05 CAGGAGTGCA CCGGAAGT CCGCCTCCCA chr5:1345188-1345268 19 1.98e-05 ccgccgccTG CCGGAAGT GGACGCGCCG chr1:154976629-154976709 17 1.98e-05 GTTTGGGACA CCGGAAGT GGGTGCTGGG chr19:16653286-16653366 54 1.98e-05 CTGGGAAACT CCGGAAGT GAGAGCGGGA chr12:122125034-12212511 50 1.98e-05 GACGCTCCTG CCGGAAGT GGGCGGGATC chr10:43633845-43633925 37 1.98e-05 CTCGCGCGCG CCGGAAGT GGCCTCTCAg chr2:183989030-183989110 44 1.98e-05 TAGCGCAGGT CCGGAAGT TACGCAACCC chr17:65362692-65362772 3 1.98e-05 CA CCGGAAGT TGCCCGCGCA chr19:633593-633673 31 1.98e-05 GAAACCCCAG CCGGAAGT AGACTCCCAG chr4:25378828-25378908 14 1.98e-05 AGTCCCGACG CCGGAAGT GCCTGGAGCG chr3:38178866-38178946 17 1.98e-05 GAAATGCAGA CCGGAAGT CTTTCCACCT chr11:69197237-69197317 46 1.98e-05 agcagaggga ccggaagt gcgcctgccc chr6:153323843-153323923 10 1.98e-05 TGACCGGAA CCGGAAGT TCCGGACACA chr3:124620298-124620378 5 1.98e-05 CCCG CCGGAAGT TGAGTTTTCT chr4:140216966-140217046 45 1.98e-05 CACCTGGCGG CCGGAAGT GCGGGACTCG chr7:111846530-111846610 48 1.98e-05 CCTCCCCATC CCGGAAGT GGGCGCGGCA chr9:139294636-139294716 30 1.98e-05 GCGCCGCGCG CCGGAAGT CCCGCCTCCT chr17:41755425-41755505 71 1.98e-05 CAGAAATCAG CCGGAAGT TC chr1:40506343-40506423 40 1.98e-05 CAGTGAGGGC CCGGAAGT GGGTCGCGCG chr1:55230353-55230433 53 1.98e-05 AATCACCGTT CCGGAAGT ACTTTCTAGG chr12:123868270-12386835 39 1.98e-05 CCACAGAGAA CCGGAAGT CCCAGATCCG chr6:21987839-21987919 8 1.98e-05 TCACCGT CCGGAAGT GCTGTTGAGG chr21:46293603-46293683 13 1.98e-05 AGCCGCGGCG CCGGAAGT GGACCTGCGA chr19:13949954-13950034 33 1.98e-05 TGGGCCGCCT CCGGAAGT GAGACAGCAC chr8:145638933-145639013 46 1.98e-05 TAAGTCCCGC CCGGAAGT GGAGGAGGAA chr9:130186607-130186687 40 1.98e-05 GTGCGCATGA CCGGAAGT GGCGCCAATC chr17:40086831-40086911 30 1.98e-05 GGGGGCGGAA CCGGAAGT CGCTGTACAT chr1:247275221-247275301 12 1.98e-05 CGGGGAGTGA CCGGAAGT GGCCTCTGCA chr5:34839189-34839269 4 1.98e-05 GAA CCGGAAGT GCCCCGCGTC chr11:67030321-67030401 34 1.98e-05 gcctgccact ccggaagt ggggaagggc chr3:32090499-32090579 7 1.98e-05 caacat ccggaagt taccctatat chr12:56320929-56321009 22 1.98e-05 CCCCTCCCCA CCGGAAGT GGAGTCCCGA chr19:16296008-16296088 10 1.98e-05 AATGGGAGA CCGGAAGT GGGCGCCAAA chr12:110562102-11056218 27 1.98e-05 GGCCGCTCGC CCGGAAGT GACGTAACTC chr9:19049319-19049399 55 1.98e-05 GAGATCGCCG CCGGAAGT GGGTGGTGGC chr8:145137492-145137572 31 1.98e-05 GTCTCTGGGA CCGGAAGT GCGGGCGAGC chr8:53627040-53627120 40 1.98e-05 CTACGCAGGT CCGGAAGT CGGCAGCCTG chr7:154795722-154795802 26 1.98e-05 ACCTGCACGA CCGGAAGT TGGGAGAAGA chr7:100861324-100861404 72 1.98e-05 GTACAAGCTA CCGGAAGT G chr5:176882482-176882562 51 1.98e-05 ATCCGGGCCG CCGGAAGT GGGCGGGCGT chr14:23564657-23564737 47 1.98e-05 GGGTCCGAGG CCGGAAGT GCGTGGGCTG chr9:131218252-131218332 13 1.98e-05 GACGCGTGGC CCGGAAGT GGGCGGCCCT chr12:56401163-56401243 64 1.98e-05 GGTAGTGGGA CCGGAAGT TGTTAGGGG chrX:13752805-13752885 48 1.98e-05 TAGCAGGTTT CCGGAAGT TGCCGGACTG chr22:27068933-27069013 40 1.98e-05 GGGGCCGTGA CCGGAAGT CCTTGGGAAA chr17:80606276-80606356 37 1.98e-05 GCCGCCGCGG CCGGAAGT GCCGGAcgta chr3:100428094-100428174 29 1.98e-05 TTCGAGAAAA CCGGAAGT GCGTGGTCAC chr10:16478964-16479044 43 1.98e-05 AGTTGGCCTG CCGGAAGT TCCCAGGGAG chr12:498451-498531 16 1.98e-05 CAGGACTTTT CCGGAAGT TACCGTGCTG chr9:77567830-77567910 64 1.98e-05 GCCCTCGCGA CCGGAAGT GCGCGCTCG chr7:6746598-6746678 43 1.98e-05 CAGGAATGCA CCGGAAGT CCGCCTCCCG chr6:28129480-28129560 43 1.98e-05 GGGACACGCC CCGGAAGT ACTGAGAGGG chr1:28995168-28995248 64 1.98e-05 GCGGCGGCGG CCGGAAGT GTTGAAGCC chr5:74532783-74532863 25 1.98e-05 GCTCCCGTGG CCGGAAGT GGGAGGCCGC chr19:42829587-42829667 12 1.98e-05 GGGGATTTCC CCGGAAGT CTCCCTTTAT chr1:43222782-43222862 13 1.98e-05 ACAAAAGAGA CCGGAAGT GCCATCTTAA chr11:61872733-61872813 19 1.98e-05 atggcaacat ccggaagt taccctatat chr7:130756926-130757006 21 1.98e-05 aaggcaatgt ccggaagt taccctatat chr19:19256963-19257043 24 1.98e-05 CCCATCCGTA CCGGAAGT GTGCGCAGTA chr7:73548737-73548817 11 1.98e-05 acggcaacac ccggaagt taccctatat chr9:33165892-33165972 37 1.98e-05 CAGGCTGCTA CCGGAAGT ACCAGAAATG chr6:68595723-68595803 55 1.98e-05 atatggtctg ccggaagt aaacgcatat chr6:151550557-151550637 5 3.33e-05 atgt caggaagt taccctatat chr11:100885790-10088587 16 3.33e-05 atggcaatgt caggaagt taccctatat chr11:57282307-57282387 29 3.33e-05 CGGACTTCGG CAGGAAGT CTGGCGGCTG chr8:103404224-103404304 13 3.33e-05 atggcaacgt caggaagt taccctatat chr20:46020849-46020929 53 3.33e-05 ggtcttggtc caggaagt tgcctgcatt chr6:164759138-164759218 27 3.33e-05 atgaaaacat caggaagt taccctatat chr2:208637330-208637410 12 3.33e-05 tggcaaccgt caggaagt taccctgtat chr18:12904071-12904151 24 3.33e-05 atggcaacgt caggaagt taccctacat chr7:97884730-97884810 26 3.33e-05 atggcaacgt caggaagt taccctatat chr8:98775170-98775250 24 3.33e-05 atggcaatgt caggaagt taccgtatat chr19:50878139-50878219 22 3.33e-05 atggcaacgt caggaagt tcccctatat chr6:841685-841765 51 3.33e-05 atggcaacgt caggaagt taccctatat chr3:45103633-45103713 9 3.33e-05 ggcaatat caggaagt taccttatat chr1:52137692-52137772 29 3.33e-05 tgagaggaca caggaagt ccaaccatat chr11:65477372-65477452 33 3.33e-05 atggcaacgg caggaagt taccgaatat chr10:73291460-73291540 46 3.33e-05 CCTGTGCAGG CAGGAAGT GGTGACATTT chr12:50616459-50616539 24 3.33e-05 GGAGCTGAAG CAGGAAGT GATAAAACAG chr22:22020493-22020573 53 6.27e-05 TCACTTCCTC CCGGAAGC TGCCGCCCTG chr19:57901063-57901143 44 6.27e-05 TAAGACAAGT CCGGAAGC GGTGTCGAAA chrX:153626441-153626521 30 6.27e-05 AGATGGCCAG CCGGAAGC GGGCTTCTCG chr5:443201-443281 61 6.27e-05 GGCGCCGTTG CCGGAAGC GGAAGTGCCC chr19:4182541-4182621 48 6.27e-05 GCCGCTTCCG CCGGAAGC GGGGCGGGGC chr10:11936695-11936775 13 6.27e-05 CTGAGGCCCA CCGGAAGC AGGGAGCACT chr8:91013191-91013271 12 6.27e-05 AGTCAAAACG CCGGAAGC TGCCCTTAGT chr22:29949759-29949839 25 6.27e-05 GGCGTAGAGG CCGGAAGC TCAGCGCGGA chr8:145980979-145981059 18 6.27e-05 ACGCCGGGAA CCGGAAGC CAGCCGCGGT chr11:108093717-10809379 63 6.27e-05 AGGGTTTGAA CCGGAAGC GGGAGTAGGT chr19:13262665-13262745 17 6.27e-05 ATATGGGCAA CCGGAAGC GGCCCGCGCG chr19:14800814-14800894 42 6.27e-05 GGCCCCGAGA CCGGAAGC GGAAGTGCGC chr4:10118472-10118552 25 6.27e-05 CGCCCCGAAC CCGGAAGC GCGGTCCCGC chrX:15873125-15873205 25 6.27e-05 GAGGTGCGAA CCGGAAGC CGGGCCACGT chr22:21983637-21983717 21 6.27e-05 CCAGCAGCTC CCGGAAGC AGCTTAGTTG chr10:48402465-48402545 17 6.27e-05 GACACTTGGA CCGGAAGC TGGCTCCTCA chr1:222484323-222484403 43 7.57e-05 TGAGCCTCCG CCGGAAAT CCAGTGAGTG chr20:62284659-62284739 20 7.57e-05 CCGGAGCCTA CCGGAAAT GGTGCTGGCC chr8:146228262-146228342 12 7.57e-05 GCCCCCTGGG CCGGAAAT GCCTAATCTG chr21:34753049-34753129 43 7.57e-05 GTCTGTGCTC CCGGAAAT CCACATTTGG chr19:8645796-8645876 14 1.16e-04 AGCACATCTG GCGGAAGT AGGCTCGGCT chr6:90348418-90348498 55 1.16e-04 GCGCGCAGGA GCGGAAGT GGGGTTCGAC chr5:67730242-67730322 73 1.16e-04 CTTAGAGAAA CAGGAAGC chr19:40926879-40926959 55 1.16e-04 TCTGCTCCTC CAGGAAGC GCCACTCTGC chr8:42270484-42270564 56 1.16e-04 CAGATAAGGT CAGGAAGC CTGAGGCCTG chr11:11832443-11832523 39 1.49e-04 GACTTGCAGG ACGGAAGT CTTGGGGAGC chr2:237994458-237994538 16 1.49e-04 TGACGGCGCC CCGGAACT GACGGTCTGG chr1:159047115-159047195 47 1.49e-04 gatggttaat ccggaact gtcatggcgt chr8:110391470-110391550 15 1.49e-04 tcgactgcta ccggaact gaccctccaa chr5:119848668-119848748 43 1.49e-04 tatggtcact ccggaact gtcatggcgt chr20:35787857-35787937 24 1.49e-04 ttcttagaag ccggaact ctaatgtcat chr12:12506875-12506955 35 1.49e-04 CTTCCAAGAA ACGGAAGT GATAAGGCCC chr3:171180168-171180248 51 1.58e-04 GTGTGGGCTG CAGGAAAT ACCATAAAAG chr1:38273837-38273917 36 1.72e-04 CCGCTTCCGG GAGGAAGT GACGCTCCCA chr21:36118008-36118088 37 1.72e-04 GGGCCTGAGA GAGGAAGT GATTATTGGA chr4:184270280-184270360 29 1.72e-04 gtggcaacgt gaggaagt tgccctatat chr5:169730276-169730356 33 1.72e-04 AGGTGGGTAG GAGGAAGT ACTTATTTGG chr9:35103152-35103232 36 2.13e-04 TTCCGCTCCC CCGGATGT ACTTCCGGCA chr22:21213169-21213249 45 2.13e-04 GTTGCGCGCG CCGGATGT GGGCCCCCCC chr1:174933690-174933770 37 2.13e-04 CTTGTCATAT AAGGAAGT TCCTTCCACC chr12:9917418-9917498 55 2.13e-04 AGACGTCAGA AAGGAAGT AAAGATGAGG chr6:15896145-15896225 28 2.13e-04 agggtaactt ccggatgt tgccatgaca chr1:169278661-169278741 50 2.53e-04 atgacaatga ccggaaga ggccataaaa chr1:86042701-86042781 50 2.53e-04 CCGCGCGCCG CCGGAAAC CTCGATTCTT chr5:133450195-133450275 47 2.53e-04 AGGGTGCGCT CCGGAAGA GCGAGCCCTT chr5:139641076-139641156 13 2.53e-04 GATACGGCAA CCGGAAAC CCATAAAAGG chr6:70506707-70506787 53 2.79e-04 CGAGGCCGCG CCAGAAGT CGCCATCTTC chr1:26963150-26963230 25 2.79e-04 atggcaacat tcggaagt taccctatat chr19:12904419-12904499 22 3.23e-04 CGCTGACGCA GCGGAAGC GCTGCCCATA chr16:3661694-3661774 70 3.23e-04 GCGGGGCGAG GCGGAAGC GGC chr6:43138913-43138993 24 3.71e-04 AGCGGAGGTG CCGGAACC ACGGACCAAT chr4:88480837-88480917 33 4.11e-04 CAAGGGACAA CAGGAAAC AAATGCCATA chr15:91191941-91192021 32 4.20e-04 atggcaacgt acggaaat taccctatat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:8578760-8578840 2e-05 16_[+1]_56 chr7:75157478-75157558 2e-05 35_[+1]_37 chr5:1345188-1345268 2e-05 18_[+1]_54 chr1:154976629-154976709 2e-05 16_[+1]_56 chr19:16653286-16653366 2e-05 53_[+1]_19 chr12:122125034-12212511 2e-05 49_[+1]_23 chr10:43633845-43633925 2e-05 36_[+1]_36 chr2:183989030-183989110 2e-05 43_[+1]_29 chr17:65362692-65362772 2e-05 2_[+1]_70 chr19:633593-633673 2e-05 30_[+1]_42 chr4:25378828-25378908 2e-05 13_[+1]_59 chr3:38178866-38178946 2e-05 16_[+1]_56 chr11:69197237-69197317 2e-05 45_[+1]_27 chr6:153323843-153323923 2e-05 9_[+1]_63 chr3:124620298-124620378 2e-05 4_[+1]_68 chr4:140216966-140217046 2e-05 44_[+1]_28 chr7:111846530-111846610 2e-05 47_[+1]_25 chr9:139294636-139294716 2e-05 29_[+1]_43 chr17:41755425-41755505 2e-05 70_[+1]_2 chr1:40506343-40506423 2e-05 39_[+1]_33 chr1:55230353-55230433 2e-05 52_[+1]_20 chr12:123868270-12386835 2e-05 38_[+1]_34 chr6:21987839-21987919 2e-05 7_[+1]_65 chr21:46293603-46293683 2e-05 12_[+1]_60 chr19:13949954-13950034 2e-05 32_[+1]_40 chr8:145638933-145639013 2e-05 45_[+1]_27 chr9:130186607-130186687 2e-05 39_[+1]_33 chr17:40086831-40086911 2e-05 29_[+1]_43 chr1:247275221-247275301 2e-05 11_[+1]_61 chr5:34839189-34839269 2e-05 3_[+1]_69 chr11:67030321-67030401 2e-05 33_[+1]_39 chr3:32090499-32090579 2e-05 6_[+1]_66 chr12:56320929-56321009 2e-05 21_[+1]_51 chr19:16296008-16296088 2e-05 9_[+1]_63 chr12:110562102-11056218 2e-05 26_[+1]_46 chr9:19049319-19049399 2e-05 54_[+1]_18 chr8:145137492-145137572 2e-05 30_[+1]_42 chr8:53627040-53627120 2e-05 39_[+1]_33 chr7:154795722-154795802 2e-05 25_[+1]_47 chr7:100861324-100861404 2e-05 71_[+1]_1 chr5:176882482-176882562 2e-05 50_[+1]_22 chr14:23564657-23564737 2e-05 46_[+1]_26 chr9:131218252-131218332 2e-05 12_[+1]_60 chr12:56401163-56401243 2e-05 63_[+1]_9 chrX:13752805-13752885 2e-05 47_[+1]_25 chr22:27068933-27069013 2e-05 39_[+1]_33 chr17:80606276-80606356 2e-05 36_[+1]_36 chr3:100428094-100428174 2e-05 28_[+1]_44 chr10:16478964-16479044 2e-05 42_[+1]_30 chr12:498451-498531 2e-05 15_[+1]_57 chr9:77567830-77567910 2e-05 63_[+1]_9 chr7:6746598-6746678 2e-05 42_[+1]_30 chr6:28129480-28129560 2e-05 42_[+1]_30 chr1:28995168-28995248 2e-05 63_[+1]_9 chr5:74532783-74532863 2e-05 24_[+1]_48 chr19:42829587-42829667 2e-05 11_[+1]_61 chr1:43222782-43222862 2e-05 12_[+1]_60 chr11:61872733-61872813 2e-05 18_[+1]_54 chr7:130756926-130757006 2e-05 20_[+1]_52 chr19:19256963-19257043 2e-05 23_[+1]_49 chr7:73548737-73548817 2e-05 10_[+1]_62 chr9:33165892-33165972 2e-05 36_[+1]_36 chr6:68595723-68595803 2e-05 54_[+1]_18 chr6:151550557-151550637 3.3e-05 4_[+1]_68 chr11:100885790-10088587 3.3e-05 15_[+1]_57 chr11:57282307-57282387 3.3e-05 28_[+1]_44 chr8:103404224-103404304 3.3e-05 12_[+1]_60 chr20:46020849-46020929 3.3e-05 52_[+1]_20 chr6:164759138-164759218 3.3e-05 26_[+1]_46 chr2:208637330-208637410 3.3e-05 11_[+1]_61 chr18:12904071-12904151 3.3e-05 23_[+1]_49 chr7:97884730-97884810 3.3e-05 25_[+1]_47 chr8:98775170-98775250 3.3e-05 23_[+1]_49 chr19:50878139-50878219 3.3e-05 21_[+1]_51 chr6:841685-841765 3.3e-05 50_[+1]_22 chr3:45103633-45103713 3.3e-05 8_[+1]_64 chr1:52137692-52137772 3.3e-05 28_[+1]_44 chr11:65477372-65477452 3.3e-05 32_[+1]_40 chr10:73291460-73291540 3.3e-05 45_[+1]_27 chr12:50616459-50616539 3.3e-05 23_[+1]_49 chr22:22020493-22020573 6.3e-05 52_[+1]_20 chr19:57901063-57901143 6.3e-05 43_[+1]_29 chrX:153626441-153626521 6.3e-05 29_[+1]_43 chr5:443201-443281 6.3e-05 60_[+1]_12 chr19:4182541-4182621 6.3e-05 47_[+1]_25 chr10:11936695-11936775 6.3e-05 12_[+1]_60 chr8:91013191-91013271 6.3e-05 11_[+1]_61 chr22:29949759-29949839 6.3e-05 24_[+1]_48 chr8:145980979-145981059 6.3e-05 17_[+1]_55 chr11:108093717-10809379 6.3e-05 62_[+1]_10 chr19:13262665-13262745 6.3e-05 16_[+1]_56 chr19:14800814-14800894 6.3e-05 41_[+1]_31 chr4:10118472-10118552 6.3e-05 24_[+1]_48 chrX:15873125-15873205 6.3e-05 24_[+1]_48 chr22:21983637-21983717 6.3e-05 20_[+1]_52 chr10:48402465-48402545 6.3e-05 16_[+1]_56 chr1:222484323-222484403 7.6e-05 42_[+1]_30 chr20:62284659-62284739 7.6e-05 19_[+1]_53 chr8:146228262-146228342 7.6e-05 11_[+1]_61 chr21:34753049-34753129 7.6e-05 42_[+1]_30 chr19:8645796-8645876 0.00012 13_[+1]_59 chr6:90348418-90348498 0.00012 54_[+1]_18 chr5:67730242-67730322 0.00012 72_[+1] chr19:40926879-40926959 0.00012 54_[+1]_18 chr8:42270484-42270564 0.00012 55_[+1]_17 chr11:11832443-11832523 0.00015 38_[+1]_34 chr2:237994458-237994538 0.00015 15_[+1]_57 chr1:159047115-159047195 0.00015 46_[+1]_26 chr8:110391470-110391550 0.00015 14_[+1]_58 chr5:119848668-119848748 0.00015 42_[+1]_30 chr20:35787857-35787937 0.00015 23_[+1]_49 chr12:12506875-12506955 0.00015 34_[+1]_38 chr3:171180168-171180248 0.00016 50_[+1]_22 chr1:38273837-38273917 0.00017 35_[+1]_37 chr21:36118008-36118088 0.00017 36_[+1]_36 chr4:184270280-184270360 0.00017 28_[+1]_44 chr5:169730276-169730356 0.00017 32_[+1]_40 chr9:35103152-35103232 0.00021 35_[+1]_37 chr22:21213169-21213249 0.00021 44_[+1]_28 chr1:174933690-174933770 0.00021 36_[+1]_36 chr12:9917418-9917498 0.00021 54_[+1]_18 chr6:15896145-15896225 0.00021 27_[+1]_45 chr1:169278661-169278741 0.00025 49_[+1]_23 chr1:86042701-86042781 0.00025 49_[+1]_23 chr5:133450195-133450275 0.00025 46_[+1]_26 chr5:139641076-139641156 0.00025 12_[+1]_60 chr6:70506707-70506787 0.00028 52_[+1]_20 chr1:26963150-26963230 0.00028 24_[+1]_48 chr19:12904419-12904499 0.00032 21_[+1]_51 chr16:3661694-3661774 0.00032 69_[+1]_3 chr6:43138913-43138993 0.00037 23_[+1]_49 chr4:88480837-88480917 0.00041 32_[+1]_40 chr15:91191941-91192021 0.00042 31_[+1]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCGGAAGT width=8 seqs=133 chr19:8578760-8578840 ( 17) CCGGAAGT 1 chr7:75157478-75157558 ( 36) CCGGAAGT 1 chr5:1345188-1345268 ( 19) CCGGAAGT 1 chr1:154976629-154976709 ( 17) CCGGAAGT 1 chr19:16653286-16653366 ( 54) CCGGAAGT 1 chr12:122125034-12212511 ( 50) CCGGAAGT 1 chr10:43633845-43633925 ( 37) CCGGAAGT 1 chr2:183989030-183989110 ( 44) CCGGAAGT 1 chr17:65362692-65362772 ( 3) CCGGAAGT 1 chr19:633593-633673 ( 31) CCGGAAGT 1 chr4:25378828-25378908 ( 14) CCGGAAGT 1 chr3:38178866-38178946 ( 17) CCGGAAGT 1 chr11:69197237-69197317 ( 46) CCGGAAGT 1 chr6:153323843-153323923 ( 10) CCGGAAGT 1 chr3:124620298-124620378 ( 5) CCGGAAGT 1 chr4:140216966-140217046 ( 45) CCGGAAGT 1 chr7:111846530-111846610 ( 48) CCGGAAGT 1 chr9:139294636-139294716 ( 30) CCGGAAGT 1 chr17:41755425-41755505 ( 71) CCGGAAGT 1 chr1:40506343-40506423 ( 40) CCGGAAGT 1 chr1:55230353-55230433 ( 53) CCGGAAGT 1 chr12:123868270-12386835 ( 39) CCGGAAGT 1 chr6:21987839-21987919 ( 8) CCGGAAGT 1 chr21:46293603-46293683 ( 13) CCGGAAGT 1 chr19:13949954-13950034 ( 33) CCGGAAGT 1 chr8:145638933-145639013 ( 46) CCGGAAGT 1 chr9:130186607-130186687 ( 40) CCGGAAGT 1 chr17:40086831-40086911 ( 30) CCGGAAGT 1 chr1:247275221-247275301 ( 12) CCGGAAGT 1 chr5:34839189-34839269 ( 4) CCGGAAGT 1 chr11:67030321-67030401 ( 34) CCGGAAGT 1 chr3:32090499-32090579 ( 7) CCGGAAGT 1 chr12:56320929-56321009 ( 22) CCGGAAGT 1 chr19:16296008-16296088 ( 10) CCGGAAGT 1 chr12:110562102-11056218 ( 27) CCGGAAGT 1 chr9:19049319-19049399 ( 55) CCGGAAGT 1 chr8:145137492-145137572 ( 31) CCGGAAGT 1 chr8:53627040-53627120 ( 40) CCGGAAGT 1 chr7:154795722-154795802 ( 26) CCGGAAGT 1 chr7:100861324-100861404 ( 72) CCGGAAGT 1 chr5:176882482-176882562 ( 51) CCGGAAGT 1 chr14:23564657-23564737 ( 47) CCGGAAGT 1 chr9:131218252-131218332 ( 13) CCGGAAGT 1 chr12:56401163-56401243 ( 64) CCGGAAGT 1 chrX:13752805-13752885 ( 48) CCGGAAGT 1 chr22:27068933-27069013 ( 40) CCGGAAGT 1 chr17:80606276-80606356 ( 37) CCGGAAGT 1 chr3:100428094-100428174 ( 29) CCGGAAGT 1 chr10:16478964-16479044 ( 43) CCGGAAGT 1 chr12:498451-498531 ( 16) CCGGAAGT 1 chr9:77567830-77567910 ( 64) CCGGAAGT 1 chr7:6746598-6746678 ( 43) CCGGAAGT 1 chr6:28129480-28129560 ( 43) CCGGAAGT 1 chr1:28995168-28995248 ( 64) CCGGAAGT 1 chr5:74532783-74532863 ( 25) CCGGAAGT 1 chr19:42829587-42829667 ( 12) CCGGAAGT 1 chr1:43222782-43222862 ( 13) CCGGAAGT 1 chr11:61872733-61872813 ( 19) CCGGAAGT 1 chr7:130756926-130757006 ( 21) CCGGAAGT 1 chr19:19256963-19257043 ( 24) CCGGAAGT 1 chr7:73548737-73548817 ( 11) CCGGAAGT 1 chr9:33165892-33165972 ( 37) CCGGAAGT 1 chr6:68595723-68595803 ( 55) CCGGAAGT 1 chr6:151550557-151550637 ( 5) CAGGAAGT 1 chr11:100885790-10088587 ( 16) CAGGAAGT 1 chr11:57282307-57282387 ( 29) CAGGAAGT 1 chr8:103404224-103404304 ( 13) CAGGAAGT 1 chr20:46020849-46020929 ( 53) CAGGAAGT 1 chr6:164759138-164759218 ( 27) CAGGAAGT 1 chr2:208637330-208637410 ( 12) CAGGAAGT 1 chr18:12904071-12904151 ( 24) CAGGAAGT 1 chr7:97884730-97884810 ( 26) CAGGAAGT 1 chr8:98775170-98775250 ( 24) CAGGAAGT 1 chr19:50878139-50878219 ( 22) CAGGAAGT 1 chr6:841685-841765 ( 51) CAGGAAGT 1 chr3:45103633-45103713 ( 9) CAGGAAGT 1 chr1:52137692-52137772 ( 29) CAGGAAGT 1 chr11:65477372-65477452 ( 33) CAGGAAGT 1 chr10:73291460-73291540 ( 46) CAGGAAGT 1 chr12:50616459-50616539 ( 24) CAGGAAGT 1 chr22:22020493-22020573 ( 53) CCGGAAGC 1 chr19:57901063-57901143 ( 44) CCGGAAGC 1 chrX:153626441-153626521 ( 30) CCGGAAGC 1 chr5:443201-443281 ( 61) CCGGAAGC 1 chr19:4182541-4182621 ( 48) CCGGAAGC 1 chr10:11936695-11936775 ( 13) CCGGAAGC 1 chr8:91013191-91013271 ( 12) CCGGAAGC 1 chr22:29949759-29949839 ( 25) CCGGAAGC 1 chr8:145980979-145981059 ( 18) CCGGAAGC 1 chr11:108093717-10809379 ( 63) CCGGAAGC 1 chr19:13262665-13262745 ( 17) CCGGAAGC 1 chr19:14800814-14800894 ( 42) CCGGAAGC 1 chr4:10118472-10118552 ( 25) CCGGAAGC 1 chrX:15873125-15873205 ( 25) CCGGAAGC 1 chr22:21983637-21983717 ( 21) CCGGAAGC 1 chr10:48402465-48402545 ( 17) CCGGAAGC 1 chr1:222484323-222484403 ( 43) CCGGAAAT 1 chr20:62284659-62284739 ( 20) CCGGAAAT 1 chr8:146228262-146228342 ( 12) CCGGAAAT 1 chr21:34753049-34753129 ( 43) CCGGAAAT 1 chr19:8645796-8645876 ( 14) GCGGAAGT 1 chr6:90348418-90348498 ( 55) GCGGAAGT 1 chr5:67730242-67730322 ( 73) CAGGAAGC 1 chr19:40926879-40926959 ( 55) CAGGAAGC 1 chr8:42270484-42270564 ( 56) CAGGAAGC 1 chr11:11832443-11832523 ( 39) ACGGAAGT 1 chr2:237994458-237994538 ( 16) CCGGAACT 1 chr1:159047115-159047195 ( 47) CCGGAACT 1 chr8:110391470-110391550 ( 15) CCGGAACT 1 chr5:119848668-119848748 ( 43) CCGGAACT 1 chr20:35787857-35787937 ( 24) CCGGAACT 1 chr12:12506875-12506955 ( 35) ACGGAAGT 1 chr3:171180168-171180248 ( 51) CAGGAAAT 1 chr1:38273837-38273917 ( 36) GAGGAAGT 1 chr21:36118008-36118088 ( 37) GAGGAAGT 1 chr4:184270280-184270360 ( 29) GAGGAAGT 1 chr5:169730276-169730356 ( 33) GAGGAAGT 1 chr9:35103152-35103232 ( 36) CCGGATGT 1 chr22:21213169-21213249 ( 45) CCGGATGT 1 chr1:174933690-174933770 ( 37) AAGGAAGT 1 chr12:9917418-9917498 ( 55) AAGGAAGT 1 chr6:15896145-15896225 ( 28) CCGGATGT 1 chr1:169278661-169278741 ( 50) CCGGAAGA 1 chr1:86042701-86042781 ( 50) CCGGAAAC 1 chr5:133450195-133450275 ( 47) CCGGAAGA 1 chr5:139641076-139641156 ( 13) CCGGAAAC 1 chr6:70506707-70506787 ( 53) CCAGAAGT 1 chr1:26963150-26963230 ( 25) TCGGAAGT 1 chr19:12904419-12904499 ( 22) GCGGAAGC 1 chr16:3661694-3661774 ( 70) GCGGAAGC 1 chr6:43138913-43138993 ( 24) CCGGAACC 1 chr4:88480837-88480917 ( 33) CAGGAAAC 1 chr15:91191941-91192021 ( 32) ACGGAAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.86775 E= 1.1e-164 -241 160 -235 -473 8 142 -1370 -1370 -473 -1370 170 -1370 -1370 -1370 171 -1370 232 -1370 -1370 -1370 229 -1370 -1370 -314 -156 -271 154 -1370 -373 -65 -1370 200 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 133 E= 1.1e-164 0.037594 0.894737 0.060150 0.007519 0.210526 0.789474 0.000000 0.000000 0.007519 0.000000 0.992481 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.977444 0.000000 0.000000 0.022556 0.067669 0.045113 0.887218 0.000000 0.015038 0.187970 0.000000 0.796992 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCGGAAGT MEME-1 regular expression -------------------------------------------------------------------------------- C[CA]GGAAGT -------------------------------------------------------------------------------- Time 4.91 secs. ******************************************************************************** ******************************************************************************** MOTIF ACTTCCKG MEME-2 width = 8 sites = 133 llr = 997 E-value = 1.5e-087 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6:::::1: pos.-specific C :8:1aa:1 probability G 21::::69 matrix T 11a9::3: bits 2.3 * 2.1 * 1.9 *** 1.6 **** Relative 1.4 **** Entropy 1.2 **** * (10.8 bits) 0.9 **** * 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel ACTTCCGG consensus G T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr13:111805951-11180603 43 1.90e-05 TGAGGACGTC ACTTCCGG CGCCGGGGCT chr6:27447498-27447578 56 1.90e-05 AGAAAAGCAC ACTTCCGG TAAACACAGT chr7:92077821-92077901 62 1.90e-05 CGGGTGCTGA ACTTCCGG TTTTACTTAG chr20:43104497-43104577 20 1.90e-05 CTGGATCGTC ACTTCCGG CGCGAGAGGC chr7:5085396-5085476 25 1.90e-05 CCGGAGGCTG ACTTCCGG TGCACTCCTG chr5:158690220-158690300 41 1.90e-05 CAAACCACCC ACTTCCGG TTTTTCAGCC chr16:89724079-89724159 43 1.90e-05 TCGCCGCCCC ACTTCCGG TCGCACGGGA chr9:35103152-35103232 44 1.90e-05 CCCCGGATGT ACTTCCGG CAGCTCCCTC chr15:40615727-40615807 44 1.90e-05 CCCTCGCGGC ACTTCCGG ACCCCGGCGT chr16:70557427-70557507 25 1.90e-05 CCCATTCGGC ACTTCCGG TCCCGCGAGG chrX:48815616-48815696 31 1.90e-05 CTGTAGCGTC ACTTCCGG TCCCACCCAC chr1:45657003-45657083 44 1.90e-05 tgatgaaagc acttccgg cagctgggca chr16:25118436-25118516 30 1.90e-05 CTCTCGCGTC ACTTCCGG CGCGCCGTCC chr7:6769330-6769410 12 1.90e-05 TGGGAGGCGG ACTTCCGG TGAACTCCTG chr2:74734789-74734869 31 1.90e-05 CCAGCCGGCC ACTTCCGG TGCCGCCTGC chr10:93683469-93683549 37 1.90e-05 AGCTTACGTC ACTTCCGG CGCGCTGACG chr2:55746687-55746767 47 1.90e-05 AGTTGTCTTC ACTTCCGG GCCGCGGTCT chr5:79703689-79703769 5 1.90e-05 AGGC ACTTCCGG TAAGAAATCT chr11:506823-506903 16 1.90e-05 CCGGGCAAGG ACTTCCGG CAAGCCCCAA chrX:117479869-117479949 36 1.90e-05 CTTCTCGGCT ACTTCCGG CCCTCACCGA chr3:42922556-42922636 19 1.90e-05 GGGCGGGTGC ACTTCCGG CCCCCGAAGC chr20:45386839-45386919 27 1.90e-05 CCCACACAGC ACTTCCGG CAGATCCTGG chr13:115079776-11507985 18 1.90e-05 CACGTGCGGC ACTTCCGG GGCGGGGCGG chr19:1174247-1174327 34 1.90e-05 GGCCCCGCGC ACTTCCGG TCATGCCGCG chr1:100232144-100232224 45 1.90e-05 AGCCTAACCA ACTTCCGG TTTTGTTACA chr9:130981128-130981208 33 1.90e-05 GATTCCGCCC ACTTCCGG CCACGCCTCC chr9:88969311-88969391 55 1.90e-05 CTTCGGCCCC ACTTCCGG CGCTCAGCGC chr20:626286-626366 60 1.90e-05 GGGAAACGCA ACTTCCGG CTACCAGCAG chr11:76758784-76758864 29 1.90e-05 atatagggta acttccgg tcgttgccat chr3:37865749-37865829 24 3.14e-05 tactacggta acttcctg acgttgccat chr11:59315371-59315451 70 3.14e-05 atatagggta acttcctg aca chr20:55407676-55407756 43 3.14e-05 atataaggta acttcctg acgttgccat chr6:147208465-147208545 25 3.14e-05 atatagggta acttcctg atgttgccat chr3:21084782-21084862 62 3.14e-05 atatagggta acttcctg acgtttataa chr20:61023288-61023368 57 3.14e-05 aaataaggcc acttcctg gggtgctggg chr1:26034733-26034813 45 3.14e-05 atatatggta acttcctg atgttgccat chr14:74227013-74227093 37 3.14e-05 GGCGCCGCCC ACTTCCTG CGACCAAATA chr22:41260175-41260255 46 3.14e-05 atatagggta acttcctg acgttgccat chr7:12787589-12787669 39 3.14e-05 atattgggta acttcctg acgtggccgt chr5:125849906-125849986 49 3.14e-05 atatagggaa acttcctg tcgttgccat chr11:95976499-95976579 40 3.14e-05 AACGGCAGGC ACTTCCTG CTAGAGGAGG chr7:157100704-157100784 47 3.14e-05 atatatggta acttcctg acgttgccat chr20:35787857-35787937 60 3.14e-05 tatgggagta acttcctg ccaaatatac chr5:169730276-169730356 51 3.14e-05 ACTTATTTGG ACTTCCTG TCAAACCTTC chr10:73291460-73291540 32 3.14e-05 CATATTTGGC ACTTCCTG TGCAGGCAGG chr6:97345836-97345916 71 8.58e-05 CACGAGGGCC GCTTCCGG CG chr6:70506707-70506787 71 8.58e-05 CGCCATCTTC GCTTCCGG TC chr1:154976629-154976709 63 8.58e-05 GGCTGTCCAG GCTTCCGG GCCAGGTGGA chr20:49347596-49347676 40 8.58e-05 GTGCGCTCGC GCTTCCGG CCGGCCTCCC chr1:38273837-38273917 58 8.58e-05 CTCCCAGCCA GCTTCCGG TCCAGGAGAC chr16:70333036-70333116 42 8.58e-05 GTGGCGCGCC GCTTCCGG TCTGCAGCCT chr1:40506343-40506423 7 8.58e-05 CGGCTC ATTTCCGG TGGGGGCGCC chr5:443201-443281 45 8.58e-05 CCGGACCCGT GCTTCCGG CGCCGTTGCC chr2:234160178-234160258 16 8.58e-05 TGCAGCTGAC GCTTCCGG CTACAGGCTG chr2:220110176-220110256 31 8.58e-05 TGTCAGCACT GCTTCCGG TCGGTGGCGC chr17:43394622-43394702 40 8.58e-05 AATGGGCACT ATTTCCGG ACGATGTTTG chr16:3661694-3661774 42 8.58e-05 ggcggccAGC GCTTCCGG TCGGCAGGAG chr6:28129480-28129560 27 8.58e-05 CCGCCCAGAA ATTTCCGG GACACGCCCC chr11:126350733-12635081 49 8.58e-05 TGTAATCCCA GCTTCCGG TTTCCTCACG chr10:72124400-72124480 6 8.58e-05 GCTCG GCTTCCGG TCCTTGGCTT chr19:50819466-50819546 66 8.58e-05 TATGGAAGGA GCTTCCGG GCTGGCT chr2:55361171-55361251 48 8.58e-05 atatatggta acttccag acggttgcca chr20:49955283-49955363 59 8.58e-05 atataaggca acttccag gtgttgctat chr5:137800766-137800846 70 8.58e-05 TGGCCCGGCC GCTTCCGG CTC chr19:40926879-40926959 20 8.58e-05 CGCCTCATCC ACTTCCAG AAATGGGCAC chr10:124895425-12489550 62 8.58e-05 TTATGGTCTG ATTTCCGG CCTCTCGCCT chr7:44084197-44084277 22 1.32e-04 TACCATTTCC GCTTCCTG CCGTGGGGCG chr19:4457886-4457966 68 1.32e-04 TCTCTGTGGT TCTTCCGG ACTCC chr8:145980979-145981059 47 1.32e-04 CCGCCCGGAT TCTTCCGG GGCCGCTCTG chr1:11967904-11967984 50 1.32e-04 CATTTAAGGT ATTTCCTG AAACTGGAGC chr17:53894871-53894951 19 1.32e-04 GAAGGTCAGT TCTTCCGG TAGAATGGGA chr19:34742703-34742783 62 1.32e-04 aatatggtcc tcttccgg ggcttcccaa chr2:208637330-208637410 54 1.52e-04 aggaaccctc agttccgg gaattgcccg chr18:12904071-12904151 66 1.52e-04 aggaaccctc agttccgg gaactgc chrX:18693082-18693162 66 1.52e-04 GACTCACAGC AGTTCCGG TCCCTCC chr7:130756926-130757006 63 1.52e-04 aggaactctc agttccgg gaaatctcca chr7:38895606-38895686 1 1.83e-04 . tcttcctg gtttgcagac chr3:58045568-58045648 29 1.83e-04 TGTTTGGGCA TCTTCCTG TGTACTCCCG chr12:122681637-12268171 27 1.83e-04 ggggttacaa tcttcctg ggtgtcgccc chr13:111365354-11136543 42 1.83e-04 ATGCGCCGCC ACTTCCGC CCGTGCCCGG chr19:12900743-12900823 8 1.83e-04 TCCCACC TCTTCCTG TGCCCTAATA chr19:597638-597718 71 1.83e-04 GGTTTCTAGG TCTTCCTG GT chr8:146228262-146228342 31 1.83e-04 CCTAATCTGA ACTTCCGC CCTGCCCTTC chr7:2119369-2119449 44 1.83e-04 CCATAAATTC ACTTCCGC CCCAGGCTGC chr6:151550557-151550637 46 1.95e-04 aagaaccctc agttcctg gaactgccca chr1:26963150-26963230 67 1.95e-04 aggggccctc agttcctg ggaaat chr22:22020493-22020573 45 2.07e-04 CCCAAAGGTC ACTTCCTC CCGGAAGCTG chr8:99617736-99617816 54 2.07e-04 TTCCTCTCTT ACTTCCTC CCTCTCTGTC chr4:184270280-184270360 69 2.20e-04 agggaccctc aattccgg gaat chr10:64576430-64576510 35 2.20e-04 GGCGGGGAGG AATTCCGG TTCTCTGGGA chr6:21987839-21987919 56 2.76e-04 GCCGACCCAG ACTCCCGG TAATTCCCTG chr11:64764563-64764643 30 2.76e-04 CATGAACTGG CCTTCCGG TTGGGCCCCT chr1:36181227-36181307 65 2.76e-04 CGAATAAGCT CCTTCCGG TTGTCTAG chr17:16189437-16189517 17 2.76e-04 GGTGGCTGAA CCTTCCGG CTTGCGCTGT chr6:158402531-158402611 37 2.76e-04 AGCCTGGCGG ACTCCCGG GCCGGGCTGC chr14:70163770-70163850 8 3.32e-04 gggtggg aattcctg gaactgaggg chr19:50169078-50169158 49 3.32e-04 CCTTTTTTGG GTTTCCGG CCAGAGGCAT chr12:9917418-9917498 9 3.81e-04 GCAGCTTT CCTTCCTG TGTGACCTTA chr19:14800814-14800894 17 3.81e-04 AGCCACAGCC ACTTCCGT TCCCGGCGGC chr1:229416455-229416535 21 3.81e-04 gatacaggac acttccgt caccacaaga chr19:17001455-17001535 34 3.81e-04 cacttcacgt ccttcctg ggacctcaga chr2:145338316-145338396 46 4.19e-04 CTACATGAAG GTTTCCTG TTAGGTGATG chr12:123868270-12386835 15 4.70e-04 TCAAAGGTCG GGTTCCGG TCAAGCCCAC chr3:32090499-32090579 49 4.70e-04 aggacccctc agttccag gaaatccctg chr6:164759138-164759218 69 4.70e-04 aggaaccctc agttccag ggaa chr7:97884730-97884810 68 4.70e-04 gggaaacctt agttccag gaatt chr12:833750-833830 27 4.70e-04 TATGTGAGTC ACTTCCTT TCTCCTTGCC chr19:16653286-16653366 17 5.31e-04 TTCTAGGGCC GCTTCCGC CCGCCACTTA chr11:17281630-17281710 67 5.31e-04 GGCCCAACCC TTTTCCTG TTGTGC chr17:79428118-79428198 26 5.31e-04 TTTGGCAACG GCTTCCGC GCCGACTCCT chr14:75760968-75761048 32 5.31e-04 ccggcccgcc gcTTCCGC TCTGCCCATA chr17:77784004-77784084 13 5.70e-04 CCTGTATTTA GGTTCCTG CCCTTATATG chr10:43633845-43633925 22 6.15e-04 cggcggcTTC ATTTCCTC GCGCGCGCCG chr8:110391470-110391550 44 6.15e-04 tatgggcttt gcttcctc tttctacagt chr5:137827830-137827910 21 6.15e-04 CCTACAAGGC GCTTCCTC CCGGCCCCAG chr18:39535067-39535147 33 6.47e-04 TTCGGCGGGG AGTTCCGC CGCGTCGGAA chr19:50876301-50876381 51 6.47e-04 caaatatggg tgttcctg taaccgtcct chr6:126240288-126240368 35 6.47e-04 AATTTGGGTG TGTTCCTG TAGAAATGTT chr11:108093717-10809379 19 6.58e-04 TGGCGTTGCT TCTTCCTC CAGAAGTGGG chr8:22552893-22552973 63 7.12e-04 TTTGGCTGCA GATTCCGG TCCCAAGATT chr12:56584072-56584152 17 8.30e-04 TCCCGCACGC ATTCCCGG ATTGCAGTGC chr19:633593-633673 41 8.30e-04 CCGGAAGTAG ACTCCCAG GATGCAGCGG chr22:27068933-27069013 68 8.30e-04 GATCCGTCCC ATTCCCGG AAGCT chr6:841685-841765 7 8.30e-04 aaagac actcccag cagcaccatg chr5:1345188-1345268 41 9.93e-04 GCGCCGCGCG GCTCCCTG GGAAACGGAG chr9:115308572-115308652 52 9.93e-04 agttccaaga attccctg cccctttcct chr12:56401163-56401243 5 9.93e-04 GCAG TCTCCCGG GCTTGGGGAC chr6:138170655-138170735 48 1.10e-03 GTGAGACCAA TTTTCCAG TGCAAATCCT chr12:498451-498531 67 1.22e-03 GAAACGGAAT CCTTCCGC AGCTGC chr8:98775170-98775250 69 1.22e-03 aggaaccttc ggttccag gaat chr1:222484323-222484403 23 1.34e-03 ACAGCATGTG ACATCCTG ACTGAGCCTC chr17:40086831-40086911 70 1.34e-03 AAGAAACGGA GCTTCCAC AAA chr11:61872733-61872813 61 1.67e-03 aggaactctc atttctgg gaattctctg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr13:111805951-11180603 1.9e-05 42_[+2]_30 chr6:27447498-27447578 1.9e-05 55_[+2]_17 chr7:92077821-92077901 1.9e-05 61_[+2]_11 chr20:43104497-43104577 1.9e-05 19_[+2]_53 chr7:5085396-5085476 1.9e-05 24_[+2]_48 chr5:158690220-158690300 1.9e-05 40_[+2]_32 chr16:89724079-89724159 1.9e-05 42_[+2]_30 chr9:35103152-35103232 1.9e-05 43_[+2]_29 chr15:40615727-40615807 1.9e-05 43_[+2]_29 chr16:70557427-70557507 1.9e-05 24_[+2]_48 chrX:48815616-48815696 1.9e-05 30_[+2]_42 chr1:45657003-45657083 1.9e-05 43_[+2]_29 chr16:25118436-25118516 1.9e-05 29_[+2]_43 chr7:6769330-6769410 1.9e-05 11_[+2]_61 chr2:74734789-74734869 1.9e-05 30_[+2]_42 chr10:93683469-93683549 1.9e-05 36_[+2]_36 chr2:55746687-55746767 1.9e-05 46_[+2]_26 chr5:79703689-79703769 1.9e-05 4_[+2]_68 chr11:506823-506903 1.9e-05 15_[+2]_57 chrX:117479869-117479949 1.9e-05 35_[+2]_37 chr3:42922556-42922636 1.9e-05 18_[+2]_54 chr20:45386839-45386919 1.9e-05 26_[+2]_46 chr13:115079776-11507985 1.9e-05 17_[+2]_55 chr19:1174247-1174327 1.9e-05 33_[+2]_39 chr1:100232144-100232224 1.9e-05 44_[+2]_28 chr9:130981128-130981208 1.9e-05 32_[+2]_40 chr9:88969311-88969391 1.9e-05 54_[+2]_18 chr20:626286-626366 1.9e-05 59_[+2]_13 chr11:76758784-76758864 1.9e-05 28_[+2]_44 chr3:37865749-37865829 3.1e-05 23_[+2]_49 chr11:59315371-59315451 3.1e-05 69_[+2]_3 chr20:55407676-55407756 3.1e-05 42_[+2]_30 chr6:147208465-147208545 3.1e-05 24_[+2]_48 chr3:21084782-21084862 3.1e-05 61_[+2]_11 chr20:61023288-61023368 3.1e-05 56_[+2]_16 chr1:26034733-26034813 3.1e-05 44_[+2]_28 chr14:74227013-74227093 3.1e-05 36_[+2]_36 chr22:41260175-41260255 3.1e-05 45_[+2]_27 chr7:12787589-12787669 3.1e-05 38_[+2]_34 chr5:125849906-125849986 3.1e-05 48_[+2]_24 chr11:95976499-95976579 3.1e-05 39_[+2]_33 chr7:157100704-157100784 3.1e-05 46_[+2]_26 chr20:35787857-35787937 3.1e-05 59_[+2]_13 chr5:169730276-169730356 3.1e-05 50_[+2]_22 chr10:73291460-73291540 3.1e-05 31_[+2]_41 chr6:97345836-97345916 8.6e-05 70_[+2]_2 chr6:70506707-70506787 8.6e-05 70_[+2]_2 chr1:154976629-154976709 8.6e-05 62_[+2]_10 chr20:49347596-49347676 8.6e-05 39_[+2]_33 chr1:38273837-38273917 8.6e-05 57_[+2]_15 chr16:70333036-70333116 8.6e-05 41_[+2]_31 chr1:40506343-40506423 8.6e-05 6_[+2]_66 chr5:443201-443281 8.6e-05 44_[+2]_28 chr2:234160178-234160258 8.6e-05 15_[+2]_57 chr2:220110176-220110256 8.6e-05 30_[+2]_42 chr17:43394622-43394702 8.6e-05 39_[+2]_33 chr16:3661694-3661774 8.6e-05 41_[+2]_31 chr6:28129480-28129560 8.6e-05 26_[+2]_46 chr11:126350733-12635081 8.6e-05 48_[+2]_24 chr10:72124400-72124480 8.6e-05 5_[+2]_67 chr19:50819466-50819546 8.6e-05 65_[+2]_7 chr2:55361171-55361251 8.6e-05 47_[+2]_25 chr20:49955283-49955363 8.6e-05 58_[+2]_14 chr5:137800766-137800846 8.6e-05 69_[+2]_3 chr19:40926879-40926959 8.6e-05 19_[+2]_53 chr10:124895425-12489550 8.6e-05 61_[+2]_11 chr7:44084197-44084277 0.00013 21_[+2]_51 chr19:4457886-4457966 0.00013 67_[+2]_5 chr8:145980979-145981059 0.00013 46_[+2]_26 chr1:11967904-11967984 0.00013 49_[+2]_23 chr17:53894871-53894951 0.00013 18_[+2]_54 chr19:34742703-34742783 0.00013 61_[+2]_11 chr2:208637330-208637410 0.00015 53_[+2]_19 chr18:12904071-12904151 0.00015 65_[+2]_7 chrX:18693082-18693162 0.00015 65_[+2]_7 chr7:130756926-130757006 0.00015 62_[+2]_10 chr7:38895606-38895686 0.00018 [+2]_72 chr3:58045568-58045648 0.00018 28_[+2]_44 chr12:122681637-12268171 0.00018 26_[+2]_46 chr13:111365354-11136543 0.00018 41_[+2]_31 chr19:12900743-12900823 0.00018 7_[+2]_65 chr19:597638-597718 0.00018 70_[+2]_2 chr8:146228262-146228342 0.00018 30_[+2]_42 chr7:2119369-2119449 0.00018 43_[+2]_29 chr6:151550557-151550637 0.0002 45_[+2]_27 chr1:26963150-26963230 0.0002 66_[+2]_6 chr22:22020493-22020573 0.00021 44_[+2]_28 chr8:99617736-99617816 0.00021 53_[+2]_19 chr4:184270280-184270360 0.00022 68_[+2]_4 chr10:64576430-64576510 0.00022 34_[+2]_38 chr6:21987839-21987919 0.00028 55_[+2]_17 chr11:64764563-64764643 0.00028 29_[+2]_43 chr1:36181227-36181307 0.00028 64_[+2]_8 chr17:16189437-16189517 0.00028 16_[+2]_56 chr6:158402531-158402611 0.00028 36_[+2]_36 chr14:70163770-70163850 0.00033 7_[+2]_65 chr19:50169078-50169158 0.00033 48_[+2]_24 chr12:9917418-9917498 0.00038 8_[+2]_64 chr19:14800814-14800894 0.00038 16_[+2]_56 chr1:229416455-229416535 0.00038 20_[+2]_52 chr19:17001455-17001535 0.00038 33_[+2]_39 chr2:145338316-145338396 0.00042 45_[+2]_27 chr12:123868270-12386835 0.00047 14_[+2]_58 chr3:32090499-32090579 0.00047 48_[+2]_24 chr6:164759138-164759218 0.00047 68_[+2]_4 chr7:97884730-97884810 0.00047 67_[+2]_5 chr12:833750-833830 0.00047 26_[+2]_46 chr19:16653286-16653366 0.00053 16_[+2]_56 chr11:17281630-17281710 0.00053 66_[+2]_6 chr17:79428118-79428198 0.00053 25_[+2]_47 chr14:75760968-75761048 0.00053 31_[+2]_41 chr17:77784004-77784084 0.00057 12_[+2]_60 chr10:43633845-43633925 0.00061 21_[+2]_51 chr8:110391470-110391550 0.00061 43_[+2]_29 chr5:137827830-137827910 0.00061 20_[+2]_52 chr18:39535067-39535147 0.00065 32_[+2]_40 chr19:50876301-50876381 0.00065 50_[+2]_22 chr6:126240288-126240368 0.00065 34_[+2]_38 chr11:108093717-10809379 0.00066 18_[+2]_54 chr8:22552893-22552973 0.00071 62_[+2]_10 chr12:56584072-56584152 0.00083 16_[+2]_56 chr19:633593-633673 0.00083 40_[+2]_32 chr22:27068933-27069013 0.00083 67_[+2]_5 chr6:841685-841765 0.00083 6_[+2]_66 chr5:1345188-1345268 0.00099 40_[+2]_32 chr9:115308572-115308652 0.00099 51_[+2]_21 chr12:56401163-56401243 0.00099 4_[+2]_68 chr6:138170655-138170735 0.0011 47_[+2]_25 chr12:498451-498531 0.0012 66_[+2]_6 chr8:98775170-98775250 0.0012 68_[+2]_4 chr1:222484323-222484403 0.0013 22_[+2]_50 chr17:40086831-40086911 0.0013 69_[+2]_3 chr11:61872733-61872813 0.0017 60_[+2]_12 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACTTCCKG width=8 seqs=133 chr13:111805951-11180603 ( 43) ACTTCCGG 1 chr6:27447498-27447578 ( 56) ACTTCCGG 1 chr7:92077821-92077901 ( 62) ACTTCCGG 1 chr20:43104497-43104577 ( 20) ACTTCCGG 1 chr7:5085396-5085476 ( 25) ACTTCCGG 1 chr5:158690220-158690300 ( 41) ACTTCCGG 1 chr16:89724079-89724159 ( 43) ACTTCCGG 1 chr9:35103152-35103232 ( 44) ACTTCCGG 1 chr15:40615727-40615807 ( 44) ACTTCCGG 1 chr16:70557427-70557507 ( 25) ACTTCCGG 1 chrX:48815616-48815696 ( 31) ACTTCCGG 1 chr1:45657003-45657083 ( 44) ACTTCCGG 1 chr16:25118436-25118516 ( 30) ACTTCCGG 1 chr7:6769330-6769410 ( 12) ACTTCCGG 1 chr2:74734789-74734869 ( 31) ACTTCCGG 1 chr10:93683469-93683549 ( 37) ACTTCCGG 1 chr2:55746687-55746767 ( 47) ACTTCCGG 1 chr5:79703689-79703769 ( 5) ACTTCCGG 1 chr11:506823-506903 ( 16) ACTTCCGG 1 chrX:117479869-117479949 ( 36) ACTTCCGG 1 chr3:42922556-42922636 ( 19) ACTTCCGG 1 chr20:45386839-45386919 ( 27) ACTTCCGG 1 chr13:115079776-11507985 ( 18) ACTTCCGG 1 chr19:1174247-1174327 ( 34) ACTTCCGG 1 chr1:100232144-100232224 ( 45) ACTTCCGG 1 chr9:130981128-130981208 ( 33) ACTTCCGG 1 chr9:88969311-88969391 ( 55) ACTTCCGG 1 chr20:626286-626366 ( 60) ACTTCCGG 1 chr11:76758784-76758864 ( 29) ACTTCCGG 1 chr3:37865749-37865829 ( 24) ACTTCCTG 1 chr11:59315371-59315451 ( 70) ACTTCCTG 1 chr20:55407676-55407756 ( 43) ACTTCCTG 1 chr6:147208465-147208545 ( 25) ACTTCCTG 1 chr3:21084782-21084862 ( 62) ACTTCCTG 1 chr20:61023288-61023368 ( 57) ACTTCCTG 1 chr1:26034733-26034813 ( 45) ACTTCCTG 1 chr14:74227013-74227093 ( 37) ACTTCCTG 1 chr22:41260175-41260255 ( 46) ACTTCCTG 1 chr7:12787589-12787669 ( 39) ACTTCCTG 1 chr5:125849906-125849986 ( 49) ACTTCCTG 1 chr11:95976499-95976579 ( 40) ACTTCCTG 1 chr7:157100704-157100784 ( 47) ACTTCCTG 1 chr20:35787857-35787937 ( 60) ACTTCCTG 1 chr5:169730276-169730356 ( 51) ACTTCCTG 1 chr10:73291460-73291540 ( 32) ACTTCCTG 1 chr6:97345836-97345916 ( 71) GCTTCCGG 1 chr6:70506707-70506787 ( 71) GCTTCCGG 1 chr1:154976629-154976709 ( 63) GCTTCCGG 1 chr20:49347596-49347676 ( 40) GCTTCCGG 1 chr1:38273837-38273917 ( 58) GCTTCCGG 1 chr16:70333036-70333116 ( 42) GCTTCCGG 1 chr1:40506343-40506423 ( 7) ATTTCCGG 1 chr5:443201-443281 ( 45) GCTTCCGG 1 chr2:234160178-234160258 ( 16) GCTTCCGG 1 chr2:220110176-220110256 ( 31) GCTTCCGG 1 chr17:43394622-43394702 ( 40) ATTTCCGG 1 chr16:3661694-3661774 ( 42) GCTTCCGG 1 chr6:28129480-28129560 ( 27) ATTTCCGG 1 chr11:126350733-12635081 ( 49) GCTTCCGG 1 chr10:72124400-72124480 ( 6) GCTTCCGG 1 chr19:50819466-50819546 ( 66) GCTTCCGG 1 chr2:55361171-55361251 ( 48) ACTTCCAG 1 chr20:49955283-49955363 ( 59) ACTTCCAG 1 chr5:137800766-137800846 ( 70) GCTTCCGG 1 chr19:40926879-40926959 ( 20) ACTTCCAG 1 chr10:124895425-12489550 ( 62) ATTTCCGG 1 chr7:44084197-44084277 ( 22) GCTTCCTG 1 chr19:4457886-4457966 ( 68) TCTTCCGG 1 chr8:145980979-145981059 ( 47) TCTTCCGG 1 chr1:11967904-11967984 ( 50) ATTTCCTG 1 chr17:53894871-53894951 ( 19) TCTTCCGG 1 chr19:34742703-34742783 ( 62) TCTTCCGG 1 chr2:208637330-208637410 ( 54) AGTTCCGG 1 chr18:12904071-12904151 ( 66) AGTTCCGG 1 chrX:18693082-18693162 ( 66) AGTTCCGG 1 chr7:130756926-130757006 ( 63) AGTTCCGG 1 chr7:38895606-38895686 ( 1) TCTTCCTG 1 chr3:58045568-58045648 ( 29) TCTTCCTG 1 chr12:122681637-12268171 ( 27) TCTTCCTG 1 chr13:111365354-11136543 ( 42) ACTTCCGC 1 chr19:12900743-12900823 ( 8) TCTTCCTG 1 chr19:597638-597718 ( 71) TCTTCCTG 1 chr8:146228262-146228342 ( 31) ACTTCCGC 1 chr7:2119369-2119449 ( 44) ACTTCCGC 1 chr6:151550557-151550637 ( 46) AGTTCCTG 1 chr1:26963150-26963230 ( 67) AGTTCCTG 1 chr22:22020493-22020573 ( 45) ACTTCCTC 1 chr8:99617736-99617816 ( 54) ACTTCCTC 1 chr4:184270280-184270360 ( 69) AATTCCGG 1 chr10:64576430-64576510 ( 35) AATTCCGG 1 chr6:21987839-21987919 ( 56) ACTCCCGG 1 chr11:64764563-64764643 ( 30) CCTTCCGG 1 chr1:36181227-36181307 ( 65) CCTTCCGG 1 chr17:16189437-16189517 ( 17) CCTTCCGG 1 chr6:158402531-158402611 ( 37) ACTCCCGG 1 chr14:70163770-70163850 ( 8) AATTCCTG 1 chr19:50169078-50169158 ( 49) GTTTCCGG 1 chr12:9917418-9917498 ( 9) CCTTCCTG 1 chr19:14800814-14800894 ( 17) ACTTCCGT 1 chr1:229416455-229416535 ( 21) ACTTCCGT 1 chr19:17001455-17001535 ( 34) CCTTCCTG 1 chr2:145338316-145338396 ( 46) GTTTCCTG 1 chr12:123868270-12386835 ( 15) GGTTCCGG 1 chr3:32090499-32090579 ( 49) AGTTCCAG 1 chr6:164759138-164759218 ( 69) AGTTCCAG 1 chr7:97884730-97884810 ( 68) AGTTCCAG 1 chr12:833750-833830 ( 27) ACTTCCTT 1 chr19:16653286-16653366 ( 17) GCTTCCGC 1 chr11:17281630-17281710 ( 67) TTTTCCTG 1 chr17:79428118-79428198 ( 26) GCTTCCGC 1 chr14:75760968-75761048 ( 32) GCTTCCGC 1 chr17:77784004-77784084 ( 13) GGTTCCTG 1 chr10:43633845-43633925 ( 22) ATTTCCTC 1 chr8:110391470-110391550 ( 44) GCTTCCTC 1 chr5:137827830-137827910 ( 21) GCTTCCTC 1 chr18:39535067-39535147 ( 33) AGTTCCGC 1 chr19:50876301-50876381 ( 51) TGTTCCTG 1 chr6:126240288-126240368 ( 35) TGTTCCTG 1 chr11:108093717-10809379 ( 19) TCTTCCTC 1 chr8:22552893-22552973 ( 63) GATTCCGG 1 chr12:56584072-56584152 ( 17) ATTCCCGG 1 chr19:633593-633673 ( 41) ACTCCCAG 1 chr22:27068933-27069013 ( 68) ATTCCCGG 1 chr6:841685-841765 ( 7) ACTCCCAG 1 chr5:1345188-1345268 ( 41) GCTCCCTG 1 chr9:115308572-115308652 ( 52) ATTCCCTG 1 chr12:56401163-56401243 ( 5) TCTCCCGG 1 chr6:138170655-138170735 ( 48) TTTTCCAG 1 chr12:498451-498531 ( 67) CCTTCCGC 1 chr8:98775170-98775250 ( 69) GGTTCCAG 1 chr1:222484323-222484403 ( 23) ACATCCTG 1 chr17:40086831-40086911 ( 70) GCTTCCAC 1 chr11:61872733-61872813 ( 61) ATTTCTGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.13415 E= 1.5e-087 166 -271 -54 -82 -273 135 -144 -92 -473 -1370 -1370 232 -1370 -212 -1370 223 -1370 176 -1370 -1370 -1370 175 -1370 -473 -127 -1370 96 70 -1370 -139 150 -314 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 133 E= 1.5e-087 0.631579 0.045113 0.210526 0.112782 0.030075 0.751880 0.112782 0.105263 0.007519 0.000000 0.000000 0.992481 0.000000 0.067669 0.000000 0.932331 0.000000 1.000000 0.000000 0.000000 0.000000 0.992481 0.000000 0.007519 0.082707 0.000000 0.593985 0.323308 0.000000 0.112782 0.864662 0.022556 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACTTCCKG MEME-2 regular expression -------------------------------------------------------------------------------- [AG]CTTCC[GT]G -------------------------------------------------------------------------------- Time 8.46 secs. ******************************************************************************** ******************************************************************************** MOTIF CCATATAW MEME-3 width = 8 sites = 103 llr = 848 E-value = 7.6e-084 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::629193 pos.-specific C aa2::::: probability G :::::::1 matrix T ::281916 bits 2.3 2.1 1.9 * *** 1.6 ** **** Relative 1.4 ** **** Entropy 1.2 ** **** (11.9 bits) 0.9 ** ***** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCATATAT consensus TA A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:115308572-115308652 11 5.49e-06 agggaagcta ccatatat ggtctgatgg chr2:86669937-86670017 11 5.49e-06 TGGGATATGA CCATATAT GGAGGGATGG chr4:10118472-10118552 66 5.49e-06 CCAGCTTTGA CCATATAT AGTCAAG chr1:26034733-26034813 33 5.49e-06 cttttttaga ccatatat ggtaacttcc chr2:55361171-55361251 36 5.49e-06 ccctttcaga ccatatat ggtaacttcc chr7:157100704-157100784 35 5.49e-06 cctttctaga ccatatat ggtaacttcc chr19:57901063-57901143 10 1.10e-05 CTTTATCTG CCATATAA GGACTGATCA chr6:43138913-43138993 64 1.10e-05 CTGGGGCTCA CCATATAA GGAGCGGCC chr2:106015501-106015581 57 1.10e-05 TGTCATTTGA CCATATAA GGAGATGCAC chr17:77784004-77784084 64 1.10e-05 AGCGGCCGCA CCATATAA GGGCACGCG chr4:88480837-88480917 46 1.10e-05 GAAACAAATG CCATATAA GGGCATCCCA chr20:55407676-55407756 31 1.10e-05 cctttttaga ccatataa ggtaacttcc chr22:31480916-31480996 22 1.10e-05 CGGGGCCGGG CCATATAA GGAAAAGCTA chr6:158402531-158402611 55 1.10e-05 GCCGGGCTGC CCATATAA GGCTGCGGGC chr20:49955283-49955363 47 1.10e-05 cggttttaga ccatataa ggcaacttcc chr7:38895606-38895686 35 1.65e-05 cccgctgtgt ccttatat ggccggcagg chr11:111849271-11184935 43 1.65e-05 CTCCTTCTGC CCTTATAT GGGAGATAAC chr22:36851246-36851326 50 1.65e-05 GCGACGCTCG CCTTATAT GGGCAGGCTC chr12:9917418-9917498 22 1.65e-05 TCCTGTGTGA CCTTATAT GTAGAATCCA chr3:45103633-45103713 19 1.65e-05 caggaagtta ccttatat ggtctaaaag chr10:112257556-11225763 39 1.65e-05 CCATATTTGG CCTTATAT GGGCAGCCGC chr12:833750-833830 43 1.65e-05 TTTCTCCTTG CCTTATAT GGTAGCACCA chr1:203259757-203259837 52 1.65e-05 GAAGTGCTTC CCTTATAT GGGCACAGAC chr17:41132112-41132192 46 1.65e-05 AGCTGCCTCT CCTTATAT GGTCGGGAGA chr11:17281630-17281710 48 2.20e-05 CACTGACTTC CCAAATAT GGGCCCAACC chr6:138170655-138170735 21 2.20e-05 GAGGAAGCTC CCAAATAT GGGCATAGAG chr19:50876301-50876381 40 2.20e-05 cacttttaca ccaaatat gggtgttcct chr10:6186820-6186900 11 2.20e-05 CAGGCTTTGA CCAAATAT GTCCCTTTCC chr1:86042701-86042781 7 2.20e-05 CTTTCA CCAAATAT GGGCCGGGGC chr20:35787857-35787937 68 2.20e-05 taacttcctg ccaaatat acttt chr19:34742703-34742783 49 2.20e-05 ctccaccctc ccaaatat ggtcctcttc chr15:91191941-91192021 42 3.01e-05 acggaaatta ccctatat ggtcgaaaag chr6:151550557-151550637 15 3.01e-05 caggaagtta ccctatat ggtctaaaag chr11:100885790-10088587 26 3.01e-05 caggaagtta ccctatat ggtcaaaaag chr8:103404224-103404304 23 3.01e-05 caggaagtta ccctatat ggtctaaaaa chr3:32090499-32090579 17 3.01e-05 ccggaagtta ccctatat ggtctaaaga chr6:164759138-164759218 37 3.01e-05 caggaagtta ccctatat ggtccgaaaa chr4:184270280-184270360 39 3.01e-05 gaggaagttg ccctatat ggtctaaggg chr7:97884730-97884810 36 3.01e-05 caggaagtta ccctatat ggtctgaaaa chr19:50878139-50878219 32 3.01e-05 caggaagttc ccctatat ggtctaaacg chr1:26963150-26963230 35 3.01e-05 tcggaagtta ccctatat ggtctaaaaa chr6:841685-841765 61 3.01e-05 caggaagtta ccctatat ggtctaaaaa chr11:61872733-61872813 29 3.01e-05 ccggaagtta ccctatat ggtctaaaaa chr7:130756926-130757006 31 3.01e-05 ccggaagtta ccctatat ggtctaaaaa chr7:73548737-73548817 21 3.01e-05 ccggaagtta ccctatat ggtctaaaag chr12:50616459-50616539 47 3.56e-05 AACAGGATGG CCTTATAA GGACAAAATG chr11:35364890-35364970 27 4.66e-05 tccgaaacaa ccatattt ggtgtaaaaa chr14:56665962-56666042 22 4.66e-05 CTCCACATGC CCATATTT GGAAACTGAA chr2:145338316-145338396 21 4.66e-05 CTGGAACCAG CCAAATAA GGTCATGCTA chr17:16189437-16189517 48 4.66e-05 AGCCACAAGA CCAAATAA GGGCGTGTGA chr20:61023288-61023368 45 4.66e-05 gaccctattt ccaaataa ggccacttcc chr14:74227013-74227093 48 4.66e-05 CTTCCTGCGA CCAAATAA GGCCGGGGAA chr17:79428118-79428198 11 4.66e-05 GTGGCCACAC CCATATTT GGCAACGGCT chr14:75760968-75761048 45 4.66e-05 TCCGCTCTGC CCATATTT GGCTCAGCCA chr10:73291460-73291540 21 4.66e-05 TAGACAACAC CCATATTT GGCACTTCCT chr19:52184972-52185052 41 4.66e-05 atatccgtgc ccaaataa ggcaaatgtc chr20:46020849-46020929 35 5.20e-05 actctctttt ccatttat ggtcttggtc chr8:99617736-99617816 21 5.20e-05 atccgcctgc cCATTTAT GGTGATAACA chr19:12900743-12900823 19 7.41e-05 CTTCCTGTGC CCTAATAT GGGCGGCGGG chr11:59315371-59315451 58 7.41e-05 tctttttaga ccatatag ggtaacttcc chr6:147208465-147208545 13 7.41e-05 tctttttaga ccatatag ggtaacttcc chr19:13262665-13262745 3 7.41e-05 GT CCTAATAT GGGCAACCGG chr3:21084782-21084862 50 7.41e-05 cattttcaga ccatatag ggtaacttcc chr14:70163770-70163850 43 7.41e-05 ccttttcaga ccatatag ggtgacttcc chr22:41260175-41260255 34 7.41e-05 ccatttcaga ccatatag ggtaacttcc chr5:125849906-125849986 37 7.41e-05 cccttgtaga ccatatag ggaaacttcc chr6:15896145-15896225 12 7.41e-05 ctgttttaga ccatatag ggtaacttcc chr11:76758784-76758864 17 7.41e-05 cctcttaaaa ccatatag ggtaacttcc chr2:187440140-187440220 16 7.96e-05 GGAAATGATA CCATAAAT GGCCAAGTGG chr7:2119369-2119449 34 7.96e-05 CGCAGGGAGA CCATAAAT TCACTTCCGC chr10:16859445-16859525 38 8.51e-05 CCGACCCTAC CCATATTA GGAGAACAGC chr10:48402465-48402545 54 8.51e-05 GTTCTTATGC CCATATTA AGCCTCTCTG chr1:11967904-11967984 39 9.43e-05 AACGCATGAA CCATTTAA GGTATTTCCT chr12:122681637-12268171 59 1.13e-04 atcattatcc cctaataa ggtcataccc chr19:17001455-17001535 58 1.13e-04 cagaatgtga ccttattt ggaaataggg chr5:137800766-137800846 38 1.13e-04 TTGGGCAGCA CCTTATTT GGAGTGGCCC chr3:169482149-169482229 14 1.19e-04 TGTAATACAA CCATAAAA GGCAACAAAA chr3:171180168-171180248 60 1.19e-04 GCAGGAAATA CCATAAAA GGAGAGATTG chr1:169278661-169278741 60 1.19e-04 ccggaagagg ccataaaa agacaaaaag chr5:139641076-139641156 21 1.19e-04 AACCGGAAAC CCATAAAA GGACCGGGAG chr11:11832443-11832523 60 1.30e-04 GGGGAGCATT CCTTTTAT GGGTGACAGA chr5:67730242-67730322 23 1.30e-04 AGGGCGATGA CCAAATTT GAAAGAAGCA chr1:229416455-229416535 52 1.30e-04 ctcctgttgc ccttttat aggcacagac chr8:98775170-98775250 34 1.56e-04 caggaagtta ccgtatat ggtctaatat chr8:110391470-110391550 29 1.56e-04 aactgaccct ccaattat gggctttgct chr19:42829587-42829667 22 2.05e-04 CCGGAAGTCT CCCTTTAT GGAGGGTTGG chr15:40615727-40615807 65 2.20e-04 CCGGCGTCGC CCTTTTAA GGGGCAGC chr5:119848668-119848748 28 2.63e-04 tttttctaga ctaaatat ggtcactccg chr7:12787589-12787669 27 2.99e-04 ccttttcaga ccatattg ggtaacttcc chr6:126240288-126240368 22 2.99e-04 TGCTCTAAAT CCTAATTT GGGTGTGTTC chr1:28995168-28995248 31 3.24e-04 GGGACGCGTC CCCTTTAA GGCGCCAGCT chr5:133450195-133450275 60 3.24e-04 GAAGAGCGAG CCCTTTAA GGCTATGCCG chr10:64576430-64576510 57 3.24e-04 CTGGGACTTT CCAAAAAA GGCGAAGATC chr3:37865749-37865829 9 3.49e-04 tttctaga ccatatac tacggtaact chr11:57282307-57282387 51 3.49e-04 CGGCTGCTGA CTTTATAA GGGCAGCGGT chr1:52137692-52137772 52 3.49e-04 catatgaggc ctttataa gggcattgaa chr6:70506707-70506787 11 3.93e-04 TAGTAAGAGG CCGAATAT GCACCAGCCG chr1:222484323-222484403 68 3.93e-04 GTGCTGATGC CCATTTTA GGGCC chr19:17033031-17033111 13 3.93e-04 CATTTGGAGT CCCTAAAA CTGCTCCACA chrX:13752805-13752885 31 3.93e-04 CTCGGGAAGG CTATATTT AGCAGGTTTC chr11:65477372-65477452 43 3.93e-04 caggaagtta ccgaatat ggtctaaaaa chr19:12904419-12904499 35 4.23e-04 GAAGCGCTGC CCATACAA GGACCGATTC chr5:137827830-137827910 41 4.23e-04 GGCCCCAGGC CCATACAA GGCGCTTCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:115308572-115308652 5.5e-06 10_[+3]_62 chr2:86669937-86670017 5.5e-06 10_[+3]_62 chr4:10118472-10118552 5.5e-06 65_[+3]_7 chr1:26034733-26034813 5.5e-06 32_[+3]_40 chr2:55361171-55361251 5.5e-06 35_[+3]_37 chr7:157100704-157100784 5.5e-06 34_[+3]_38 chr19:57901063-57901143 1.1e-05 9_[+3]_63 chr6:43138913-43138993 1.1e-05 63_[+3]_9 chr2:106015501-106015581 1.1e-05 56_[+3]_16 chr17:77784004-77784084 1.1e-05 63_[+3]_9 chr4:88480837-88480917 1.1e-05 45_[+3]_27 chr20:55407676-55407756 1.1e-05 30_[+3]_42 chr22:31480916-31480996 1.1e-05 21_[+3]_51 chr6:158402531-158402611 1.1e-05 54_[+3]_18 chr20:49955283-49955363 1.1e-05 46_[+3]_26 chr7:38895606-38895686 1.6e-05 34_[+3]_38 chr11:111849271-11184935 1.6e-05 42_[+3]_30 chr22:36851246-36851326 1.6e-05 49_[+3]_23 chr12:9917418-9917498 1.6e-05 21_[+3]_51 chr3:45103633-45103713 1.6e-05 18_[+3]_54 chr10:112257556-11225763 1.6e-05 38_[+3]_34 chr12:833750-833830 1.6e-05 42_[+3]_30 chr1:203259757-203259837 1.6e-05 51_[+3]_21 chr17:41132112-41132192 1.6e-05 45_[+3]_27 chr11:17281630-17281710 2.2e-05 47_[+3]_25 chr6:138170655-138170735 2.2e-05 20_[+3]_52 chr19:50876301-50876381 2.2e-05 39_[+3]_33 chr10:6186820-6186900 2.2e-05 10_[+3]_62 chr1:86042701-86042781 2.2e-05 6_[+3]_66 chr20:35787857-35787937 2.2e-05 67_[+3]_5 chr19:34742703-34742783 2.2e-05 48_[+3]_24 chr15:91191941-91192021 3e-05 41_[+3]_31 chr6:151550557-151550637 3e-05 14_[+3]_58 chr11:100885790-10088587 3e-05 25_[+3]_47 chr8:103404224-103404304 3e-05 22_[+3]_50 chr3:32090499-32090579 3e-05 16_[+3]_56 chr6:164759138-164759218 3e-05 36_[+3]_36 chr4:184270280-184270360 3e-05 38_[+3]_34 chr7:97884730-97884810 3e-05 35_[+3]_37 chr19:50878139-50878219 3e-05 31_[+3]_41 chr1:26963150-26963230 3e-05 34_[+3]_38 chr6:841685-841765 3e-05 60_[+3]_12 chr11:61872733-61872813 3e-05 28_[+3]_44 chr7:130756926-130757006 3e-05 30_[+3]_42 chr7:73548737-73548817 3e-05 20_[+3]_52 chr12:50616459-50616539 3.6e-05 46_[+3]_26 chr11:35364890-35364970 4.7e-05 26_[+3]_46 chr14:56665962-56666042 4.7e-05 21_[+3]_51 chr2:145338316-145338396 4.7e-05 20_[+3]_52 chr17:16189437-16189517 4.7e-05 47_[+3]_25 chr20:61023288-61023368 4.7e-05 44_[+3]_28 chr14:74227013-74227093 4.7e-05 47_[+3]_25 chr17:79428118-79428198 4.7e-05 10_[+3]_62 chr14:75760968-75761048 4.7e-05 44_[+3]_28 chr10:73291460-73291540 4.7e-05 20_[+3]_52 chr19:52184972-52185052 4.7e-05 40_[+3]_32 chr20:46020849-46020929 5.2e-05 34_[+3]_38 chr8:99617736-99617816 5.2e-05 20_[+3]_52 chr19:12900743-12900823 7.4e-05 18_[+3]_54 chr11:59315371-59315451 7.4e-05 57_[+3]_15 chr6:147208465-147208545 7.4e-05 12_[+3]_60 chr19:13262665-13262745 7.4e-05 2_[+3]_70 chr3:21084782-21084862 7.4e-05 49_[+3]_23 chr14:70163770-70163850 7.4e-05 42_[+3]_30 chr22:41260175-41260255 7.4e-05 33_[+3]_39 chr5:125849906-125849986 7.4e-05 36_[+3]_36 chr6:15896145-15896225 7.4e-05 11_[+3]_61 chr11:76758784-76758864 7.4e-05 16_[+3]_56 chr2:187440140-187440220 8e-05 15_[+3]_57 chr7:2119369-2119449 8e-05 33_[+3]_39 chr10:16859445-16859525 8.5e-05 37_[+3]_35 chr10:48402465-48402545 8.5e-05 53_[+3]_19 chr1:11967904-11967984 9.4e-05 38_[+3]_34 chr12:122681637-12268171 0.00011 58_[+3]_14 chr19:17001455-17001535 0.00011 57_[+3]_15 chr5:137800766-137800846 0.00011 37_[+3]_35 chr3:169482149-169482229 0.00012 13_[+3]_59 chr3:171180168-171180248 0.00012 59_[+3]_13 chr1:169278661-169278741 0.00012 59_[+3]_13 chr5:139641076-139641156 0.00012 20_[+3]_52 chr11:11832443-11832523 0.00013 59_[+3]_13 chr5:67730242-67730322 0.00013 22_[+3]_50 chr1:229416455-229416535 0.00013 51_[+3]_21 chr8:98775170-98775250 0.00016 33_[+3]_39 chr8:110391470-110391550 0.00016 28_[+3]_44 chr19:42829587-42829667 0.00021 21_[+3]_51 chr15:40615727-40615807 0.00022 64_[+3]_8 chr5:119848668-119848748 0.00026 27_[+3]_45 chr7:12787589-12787669 0.0003 26_[+3]_46 chr6:126240288-126240368 0.0003 21_[+3]_51 chr1:28995168-28995248 0.00032 30_[+3]_42 chr5:133450195-133450275 0.00032 59_[+3]_13 chr10:64576430-64576510 0.00032 56_[+3]_16 chr3:37865749-37865829 0.00035 8_[+3]_64 chr11:57282307-57282387 0.00035 50_[+3]_22 chr1:52137692-52137772 0.00035 51_[+3]_21 chr6:70506707-70506787 0.00039 10_[+3]_62 chr1:222484323-222484403 0.00039 67_[+3]_5 chr19:17033031-17033111 0.00039 12_[+3]_60 chrX:13752805-13752885 0.00039 30_[+3]_42 chr11:65477372-65477452 0.00039 42_[+3]_30 chr19:12904419-12904499 0.00042 34_[+3]_38 chr5:137827830-137827910 0.00042 40_[+3]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCATATAW width=8 seqs=103 chr9:115308572-115308652 ( 11) CCATATAT 1 chr2:86669937-86670017 ( 11) CCATATAT 1 chr4:10118472-10118552 ( 66) CCATATAT 1 chr1:26034733-26034813 ( 33) CCATATAT 1 chr2:55361171-55361251 ( 36) CCATATAT 1 chr7:157100704-157100784 ( 35) CCATATAT 1 chr19:57901063-57901143 ( 10) CCATATAA 1 chr6:43138913-43138993 ( 64) CCATATAA 1 chr2:106015501-106015581 ( 57) CCATATAA 1 chr17:77784004-77784084 ( 64) CCATATAA 1 chr4:88480837-88480917 ( 46) CCATATAA 1 chr20:55407676-55407756 ( 31) CCATATAA 1 chr22:31480916-31480996 ( 22) CCATATAA 1 chr6:158402531-158402611 ( 55) CCATATAA 1 chr20:49955283-49955363 ( 47) CCATATAA 1 chr7:38895606-38895686 ( 35) CCTTATAT 1 chr11:111849271-11184935 ( 43) CCTTATAT 1 chr22:36851246-36851326 ( 50) CCTTATAT 1 chr12:9917418-9917498 ( 22) CCTTATAT 1 chr3:45103633-45103713 ( 19) CCTTATAT 1 chr10:112257556-11225763 ( 39) CCTTATAT 1 chr12:833750-833830 ( 43) CCTTATAT 1 chr1:203259757-203259837 ( 52) CCTTATAT 1 chr17:41132112-41132192 ( 46) CCTTATAT 1 chr11:17281630-17281710 ( 48) CCAAATAT 1 chr6:138170655-138170735 ( 21) CCAAATAT 1 chr19:50876301-50876381 ( 40) CCAAATAT 1 chr10:6186820-6186900 ( 11) CCAAATAT 1 chr1:86042701-86042781 ( 7) CCAAATAT 1 chr20:35787857-35787937 ( 68) CCAAATAT 1 chr19:34742703-34742783 ( 49) CCAAATAT 1 chr15:91191941-91192021 ( 42) CCCTATAT 1 chr6:151550557-151550637 ( 15) CCCTATAT 1 chr11:100885790-10088587 ( 26) CCCTATAT 1 chr8:103404224-103404304 ( 23) CCCTATAT 1 chr3:32090499-32090579 ( 17) CCCTATAT 1 chr6:164759138-164759218 ( 37) CCCTATAT 1 chr4:184270280-184270360 ( 39) CCCTATAT 1 chr7:97884730-97884810 ( 36) CCCTATAT 1 chr19:50878139-50878219 ( 32) CCCTATAT 1 chr1:26963150-26963230 ( 35) CCCTATAT 1 chr6:841685-841765 ( 61) CCCTATAT 1 chr11:61872733-61872813 ( 29) CCCTATAT 1 chr7:130756926-130757006 ( 31) CCCTATAT 1 chr7:73548737-73548817 ( 21) CCCTATAT 1 chr12:50616459-50616539 ( 47) CCTTATAA 1 chr11:35364890-35364970 ( 27) CCATATTT 1 chr14:56665962-56666042 ( 22) CCATATTT 1 chr2:145338316-145338396 ( 21) CCAAATAA 1 chr17:16189437-16189517 ( 48) CCAAATAA 1 chr20:61023288-61023368 ( 45) CCAAATAA 1 chr14:74227013-74227093 ( 48) CCAAATAA 1 chr17:79428118-79428198 ( 11) CCATATTT 1 chr14:75760968-75761048 ( 45) CCATATTT 1 chr10:73291460-73291540 ( 21) CCATATTT 1 chr19:52184972-52185052 ( 41) CCAAATAA 1 chr20:46020849-46020929 ( 35) CCATTTAT 1 chr8:99617736-99617816 ( 21) CCATTTAT 1 chr19:12900743-12900823 ( 19) CCTAATAT 1 chr11:59315371-59315451 ( 58) CCATATAG 1 chr6:147208465-147208545 ( 13) CCATATAG 1 chr19:13262665-13262745 ( 3) CCTAATAT 1 chr3:21084782-21084862 ( 50) CCATATAG 1 chr14:70163770-70163850 ( 43) CCATATAG 1 chr22:41260175-41260255 ( 34) CCATATAG 1 chr5:125849906-125849986 ( 37) CCATATAG 1 chr6:15896145-15896225 ( 12) CCATATAG 1 chr11:76758784-76758864 ( 17) CCATATAG 1 chr2:187440140-187440220 ( 16) CCATAAAT 1 chr7:2119369-2119449 ( 34) CCATAAAT 1 chr10:16859445-16859525 ( 38) CCATATTA 1 chr10:48402465-48402545 ( 54) CCATATTA 1 chr1:11967904-11967984 ( 39) CCATTTAA 1 chr12:122681637-12268171 ( 59) CCTAATAA 1 chr19:17001455-17001535 ( 58) CCTTATTT 1 chr5:137800766-137800846 ( 38) CCTTATTT 1 chr3:169482149-169482229 ( 14) CCATAAAA 1 chr3:171180168-171180248 ( 60) CCATAAAA 1 chr1:169278661-169278741 ( 60) CCATAAAA 1 chr5:139641076-139641156 ( 21) CCATAAAA 1 chr11:11832443-11832523 ( 60) CCTTTTAT 1 chr5:67730242-67730322 ( 23) CCAAATTT 1 chr1:229416455-229416535 ( 52) CCTTTTAT 1 chr8:98775170-98775250 ( 34) CCGTATAT 1 chr8:110391470-110391550 ( 29) CCAATTAT 1 chr19:42829587-42829667 ( 22) CCCTTTAT 1 chr15:40615727-40615807 ( 65) CCTTTTAA 1 chr5:119848668-119848748 ( 28) CTAAATAT 1 chr7:12787589-12787669 ( 27) CCATATTG 1 chr6:126240288-126240368 ( 22) CCTAATTT 1 chr1:28995168-28995248 ( 31) CCCTTTAA 1 chr5:133450195-133450275 ( 60) CCCTTTAA 1 chr10:64576430-64576510 ( 57) CCAAAAAA 1 chr3:37865749-37865829 ( 9) CCATATAC 1 chr11:57282307-57282387 ( 51) CTTTATAA 1 chr1:52137692-52137772 ( 52) CTTTATAA 1 chr6:70506707-70506787 ( 11) CCGAATAT 1 chr1:222484323-222484403 ( 68) CCATTTTA 1 chr19:17033031-17033111 ( 13) CCCTAAAA 1 chrX:13752805-13752885 ( 31) CTATATTT 1 chr11:65477372-65477452 ( 43) CCGAATAT 1 chr19:12904419-12904499 ( 35) CCATACAA 1 chr5:137827830-137827910 ( 41) CCATACAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.98401 E= 7.6e-084 -1333 176 -1333 -1333 -1333 170 -1333 -236 157 -75 -339 3 10 -1333 -1333 198 216 -1333 -1333 -90 -136 -392 -1333 218 211 -1333 -1333 -55 68 -492 -181 155 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 103 E= 7.6e-084 0.000000 1.000000 0.000000 0.000000 0.000000 0.961165 0.000000 0.038835 0.592233 0.174757 0.029126 0.203883 0.213592 0.000000 0.000000 0.786408 0.893204 0.000000 0.000000 0.106796 0.077670 0.019417 0.000000 0.902913 0.864078 0.000000 0.000000 0.135922 0.320388 0.009709 0.087379 0.582524 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATATAW MEME-3 regular expression -------------------------------------------------------------------------------- CC[AT][TA]ATA[TA] -------------------------------------------------------------------------------- Time 11.71 secs. ******************************************************************************** ******************************************************************************** MOTIF CCATGGCA MEME-4 width = 8 sites = 34 llr = 310 E-value = 6.3e-014 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::9::1:a pos.-specific C aa:1::a: probability G ::11a9:: matrix T :::9:::: bits 2.3 2.1 * 1.9 * ** 1.6 *** * ** Relative 1.4 ***** ** Entropy 1.2 ******** (13.1 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCATGGCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr15:91191941-91192021 20 1.91e-05 ttcacaagtg ccatggca acgtacggaa chr3:37865749-37865829 38 1.91e-05 cctgacgttg ccatggca tctgcaaact chr11:100885790-10088587 4 1.91e-05 atg ccatggca atgtcaggaa chr5:34839189-34839269 67 1.91e-05 CGTTCCGTTC CCATGGCA ACGGTA chr8:103404224-103404304 1 1.91e-05 . ccatggca acgtcaggaa chr20:55407676-55407756 57 1.91e-05 cctgacgttg ccatggca tctgtaaact chr6:147208465-147208545 39 1.91e-05 cctgatgttg ccatggca tttgtaaact chr18:12904071-12904151 12 1.91e-05 gtttacaatg ccatggca acgtcaggaa chr7:97884730-97884810 14 1.91e-05 tttatagatg ccatggca acgtcaggaa chr8:98775170-98775250 12 1.91e-05 gtttccaaag ccatggca atgtcaggaa chr19:50878139-50878219 10 1.91e-05 ttacaaatg ccatggca acgtcaggaa chr1:26034733-26034813 59 1.91e-05 cctgatgttg ccatggca tttataaata chr6:841685-841765 39 1.91e-05 tttgcaaatg ccatggca acgtcaggaa chr22:41260175-41260255 60 1.91e-05 cctgacgttg ccatggca tctgtaaact chr5:125849906-125849986 63 1.91e-05 cctgtcgttg ccatggca tttgtaaaat chr7:157100704-157100784 61 1.91e-05 cctgacgttg ccatggca tttgtaaact chr11:65477372-65477452 21 1.91e-05 cctaccagtg ccatggca acggcaggaa chr11:61872733-61872813 7 1.91e-05 catacg ccatggca acatccggaa chr11:76758784-76758864 43 1.91e-05 ccggtcgttg ccatggca tttgtaaact chr11:35364890-35364970 7 3.16e-05 ccagca ccatgaca gttccgaaac chr1:169278661-169278741 38 3.16e-05 ctgaaaatca ccatgaca atgaccggaa chr6:15896145-15896225 38 3.16e-05 ccggatgttg ccatgaca cctgtaaacc chr1:247275221-247275301 45 4.41e-05 GTCCCTGGGC CCATGTCA GGGACGGCTC chr6:97345836-97345916 12 1.57e-04 GCTTCTCTGC CCAGGGCA TTTAAAAGGG chr1:55230353-55230433 25 1.57e-04 CGTTGATTGG CCAGGGCA GCCTTGAGTA chr4:88480837-88480917 61 1.57e-04 TAAGGGCATC CCACGGCA GCTGCTGCTT chr4:184270280-184270360 17 1.57e-04 tttagagatg ccgtggca acgtgaggaa chr14:70163770-70163850 68 1.57e-04 tcctatgtag ccgtggca tttgt chr1:26963150-26963230 13 1.57e-04 tttataaatg acatggca acattcggaa chr20:49955283-49955363 73 1.57e-04 ccaggtgttg ctatggca chr5:139641076-139641156 66 1.57e-04 GAGCTCAAAG CCACGGCA GGCACAG chr19:597839-597919 34 1.95e-04 TTCTAGGTCT CCTTGGCA GTTTCTAGGT chr7:130756926-130757006 9 1.95e-04 tacaaatc ccaaggca atgtccggaa chr2:55361171-55361251 63 2.14e-04 cagacggttg ccatggct tttgtaaact -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:91191941-91192021 1.9e-05 19_[+4]_53 chr3:37865749-37865829 1.9e-05 37_[+4]_35 chr11:100885790-10088587 1.9e-05 3_[+4]_69 chr5:34839189-34839269 1.9e-05 66_[+4]_6 chr8:103404224-103404304 1.9e-05 [+4]_72 chr20:55407676-55407756 1.9e-05 56_[+4]_16 chr6:147208465-147208545 1.9e-05 38_[+4]_34 chr18:12904071-12904151 1.9e-05 11_[+4]_61 chr7:97884730-97884810 1.9e-05 13_[+4]_59 chr8:98775170-98775250 1.9e-05 11_[+4]_61 chr19:50878139-50878219 1.9e-05 9_[+4]_63 chr1:26034733-26034813 1.9e-05 58_[+4]_14 chr6:841685-841765 1.9e-05 38_[+4]_34 chr22:41260175-41260255 1.9e-05 59_[+4]_13 chr5:125849906-125849986 1.9e-05 62_[+4]_10 chr7:157100704-157100784 1.9e-05 60_[+4]_12 chr11:65477372-65477452 1.9e-05 20_[+4]_52 chr11:61872733-61872813 1.9e-05 6_[+4]_66 chr11:76758784-76758864 1.9e-05 42_[+4]_30 chr11:35364890-35364970 3.2e-05 6_[+4]_66 chr1:169278661-169278741 3.2e-05 37_[+4]_35 chr6:15896145-15896225 3.2e-05 37_[+4]_35 chr1:247275221-247275301 4.4e-05 44_[+4]_28 chr6:97345836-97345916 0.00016 11_[+4]_61 chr1:55230353-55230433 0.00016 24_[+4]_48 chr4:88480837-88480917 0.00016 60_[+4]_12 chr4:184270280-184270360 0.00016 16_[+4]_56 chr14:70163770-70163850 0.00016 67_[+4]_5 chr1:26963150-26963230 0.00016 12_[+4]_60 chr20:49955283-49955363 0.00016 72_[+4] chr5:139641076-139641156 0.00016 65_[+4]_7 chr19:597839-597919 0.0002 33_[+4]_39 chr7:130756926-130757006 0.0002 8_[+4]_64 chr2:55361171-55361251 0.00021 62_[+4]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCATGGCA width=8 seqs=34 chr15:91191941-91192021 ( 20) CCATGGCA 1 chr3:37865749-37865829 ( 38) CCATGGCA 1 chr11:100885790-10088587 ( 4) CCATGGCA 1 chr5:34839189-34839269 ( 67) CCATGGCA 1 chr8:103404224-103404304 ( 1) CCATGGCA 1 chr20:55407676-55407756 ( 57) CCATGGCA 1 chr6:147208465-147208545 ( 39) CCATGGCA 1 chr18:12904071-12904151 ( 12) CCATGGCA 1 chr7:97884730-97884810 ( 14) CCATGGCA 1 chr8:98775170-98775250 ( 12) CCATGGCA 1 chr19:50878139-50878219 ( 10) CCATGGCA 1 chr1:26034733-26034813 ( 59) CCATGGCA 1 chr6:841685-841765 ( 39) CCATGGCA 1 chr22:41260175-41260255 ( 60) CCATGGCA 1 chr5:125849906-125849986 ( 63) CCATGGCA 1 chr7:157100704-157100784 ( 61) CCATGGCA 1 chr11:65477372-65477452 ( 21) CCATGGCA 1 chr11:61872733-61872813 ( 7) CCATGGCA 1 chr11:76758784-76758864 ( 43) CCATGGCA 1 chr11:35364890-35364970 ( 7) CCATGACA 1 chr1:169278661-169278741 ( 38) CCATGACA 1 chr6:15896145-15896225 ( 38) CCATGACA 1 chr1:247275221-247275301 ( 45) CCATGTCA 1 chr6:97345836-97345916 ( 12) CCAGGGCA 1 chr1:55230353-55230433 ( 25) CCAGGGCA 1 chr4:88480837-88480917 ( 61) CCACGGCA 1 chr4:184270280-184270360 ( 17) CCGTGGCA 1 chr14:70163770-70163850 ( 68) CCGTGGCA 1 chr1:26963150-26963230 ( 13) ACATGGCA 1 chr20:49955283-49955363 ( 73) CTATGGCA 1 chr5:139641076-139641156 ( 66) CCACGGCA 1 chr19:597839-597919 ( 34) CCTTGGCA 1 chr7:130756926-130757006 ( 9) CCAAGGCA 1 chr2:55361171-55361251 ( 63) CCATGGCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.86128 E= 6.3e-014 -276 172 -1173 -1173 -1173 172 -1173 -276 219 -1173 -238 -276 -276 -232 -238 210 -1173 -1173 171 -1173 -118 -1173 153 -276 -1173 176 -1173 -1173 228 -1173 -1173 -276 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 34 E= 6.3e-014 0.029412 0.970588 0.000000 0.000000 0.000000 0.970588 0.000000 0.029412 0.911765 0.000000 0.058824 0.029412 0.029412 0.058824 0.058824 0.852941 0.000000 0.000000 1.000000 0.000000 0.088235 0.000000 0.882353 0.029412 0.000000 1.000000 0.000000 0.000000 0.970588 0.000000 0.000000 0.029412 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCATGGCA MEME-4 regular expression -------------------------------------------------------------------------------- CCATGGCA -------------------------------------------------------------------------------- Time 14.81 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTYTAGA MEME-5 width = 8 sites = 40 llr = 335 E-value = 4.8e-008 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::2:a2a pos.-specific C ::232::: probability G 1::22:8: matrix T aa846::: bits 2.3 * 2.1 ** * * 1.9 ** * * 1.6 ** * * Relative 1.4 *** * * Entropy 1.2 *** *** (12.1 bits) 0.9 *** *** 0.7 *** **** 0.5 *** **** 0.2 ******** 0.0 -------- Multilevel TTTTTAGA consensus CCC A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:27447498-27447578 41 3.82e-06 CTTAAACTTT TTTTTAGA AAAGCACACT chr11:59315371-59315451 50 3.82e-06 gttcctcatc tttttaga ccatataggg chr20:55407676-55407756 23 3.82e-06 ctgcctcccc tttttaga ccatataagg chr6:147208465-147208545 5 3.82e-06 cctc tttttaga ccatataggg chr1:26034733-26034813 25 3.82e-06 gttcctccct tttttaga ccatatatgg chr2:238875577-238875657 15 6.32e-06 TTGAATTTTT TTTTTAAA GCGCCCGCTG chr11:11832443-11832523 23 1.58e-05 CAGACTGCCC TTTATAGA CTTGCAGGAC chr3:37865749-37865829 1 1.58e-05 . tttctaga ccatatacta chr7:97884730-97884810 4 1.58e-05 cag tttataga tgccatggca chr7:157100704-157100784 27 1.58e-05 gttcctcccc tttctaga ccatatatgg chr5:119848668-119848748 20 1.58e-05 gtgccacctt tttctaga ctaaatatgg chr17:43394622-43394702 54 2.17e-05 CCGGACGATG TTTGTAGA AGGGAGATCG chr14:70163770-70163850 35 2.74e-05 gttcctcccc ttttcaga ccatataggg chr7:12787589-12787669 19 2.74e-05 gttcctcccc ttttcaga ccatattggg chr3:21084782-21084862 73 3.94e-05 cttcctgacg tttataaa chr19:50876301-50876381 8 3.94e-05 aggagat ttttgaga actgtggtgc chr1:26963150-26963230 3 3.94e-05 ag tttataaa tgacatggca chr20:35787857-35787937 14 4.51e-05 ccttccaaat ttcttaga agccggaact chr2:55361171-55361251 71 4.89e-05 tgccatggct tttgtaaa ct chr5:125849906-125849986 71 4.89e-05 tgccatggca tttgtaaa at chr11:76758784-76758864 51 4.89e-05 tgccatggca tttgtaaa ctgtcatggc chr19:55166485-55166565 14 6.67e-05 CACCTGGCTG TTTCCAGA GACCCGGCTA chr3:100428094-100428174 18 8.89e-05 AAATACCCGC TTTCGAGA AAACCGGAAG chr4:184270280-184270360 7 8.89e-05 ggacag tttagaga tgccgtggca chr7:38895606-38895686 10 1.12e-04 tcttcctgg tttgcaga cagccttccc chr9:115308572-115308652 65 1.12e-04 ccctgcccct ttcctaga aaacttat chrX:18693082-18693162 50 1.12e-04 TGGGACTTTA TTCATAGA CTCACAGCAG chr6:153323843-153323923 53 1.21e-04 ACACCCAGAA TTTGGAGA TAAGGGTGAG chr6:164759138-164759218 5 1.39e-04 agag tttacaaa tgccatgaaa chr8:98775170-98775250 3 1.39e-04 ag tttccaaa gccatggcaa chr20:49955283-49955363 39 1.62e-04 gttcttcccg gttttaga ccatataagg chr6:15896145-15896225 4 1.62e-04 cct gttttaga ccatataggg chr11:35364890-35364970 60 1.86e-04 ggcaccacag ttctgaga aatcttcacc chr19:50878139-50878219 66 1.86e-04 gaaccctcaa ttctgaga attgcct chr6:841685-841765 29 1.86e-04 accatgacag tttgcaaa tgccatggca chr10:48402465-48402545 72 1.86e-04 AGCCTCTCTG TTCTGAGA A chr6:151550557-151550637 69 2.36e-04 gcccacacct ttcccaga aaaa chr3:32090499-32090579 72 2.36e-04 ccctgcccat ttcccaga a chr17:41132112-41132192 9 2.36e-04 GGCCGCTA TCTTTAGA TCCTGGGGAC chr1:55230353-55230433 63 3.75e-04 CCGGAAGTAC TTTCTAGG AACTTGGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:27447498-27447578 3.8e-06 40_[+5]_32 chr11:59315371-59315451 3.8e-06 49_[+5]_23 chr20:55407676-55407756 3.8e-06 22_[+5]_50 chr6:147208465-147208545 3.8e-06 4_[+5]_68 chr1:26034733-26034813 3.8e-06 24_[+5]_48 chr2:238875577-238875657 6.3e-06 14_[+5]_58 chr11:11832443-11832523 1.6e-05 22_[+5]_50 chr3:37865749-37865829 1.6e-05 [+5]_72 chr7:97884730-97884810 1.6e-05 3_[+5]_69 chr7:157100704-157100784 1.6e-05 26_[+5]_46 chr5:119848668-119848748 1.6e-05 19_[+5]_53 chr17:43394622-43394702 2.2e-05 53_[+5]_19 chr14:70163770-70163850 2.7e-05 34_[+5]_38 chr7:12787589-12787669 2.7e-05 18_[+5]_54 chr3:21084782-21084862 3.9e-05 72_[+5] chr19:50876301-50876381 3.9e-05 7_[+5]_65 chr1:26963150-26963230 3.9e-05 2_[+5]_70 chr20:35787857-35787937 4.5e-05 13_[+5]_59 chr2:55361171-55361251 4.9e-05 70_[+5]_2 chr5:125849906-125849986 4.9e-05 70_[+5]_2 chr11:76758784-76758864 4.9e-05 50_[+5]_22 chr19:55166485-55166565 6.7e-05 13_[+5]_59 chr3:100428094-100428174 8.9e-05 17_[+5]_55 chr4:184270280-184270360 8.9e-05 6_[+5]_66 chr7:38895606-38895686 0.00011 9_[+5]_63 chr9:115308572-115308652 0.00011 64_[+5]_8 chrX:18693082-18693162 0.00011 49_[+5]_23 chr6:153323843-153323923 0.00012 52_[+5]_20 chr6:164759138-164759218 0.00014 4_[+5]_68 chr8:98775170-98775250 0.00014 2_[+5]_70 chr20:49955283-49955363 0.00016 38_[+5]_34 chr6:15896145-15896225 0.00016 3_[+5]_69 chr11:35364890-35364970 0.00019 59_[+5]_13 chr19:50878139-50878219 0.00019 65_[+5]_7 chr6:841685-841765 0.00019 28_[+5]_44 chr10:48402465-48402545 0.00019 71_[+5]_1 chr6:151550557-151550637 0.00024 68_[+5]_4 chr3:32090499-32090579 0.00024 71_[+5]_1 chr17:41132112-41132192 0.00024 8_[+5]_64 chr1:55230353-55230433 0.00038 62_[+5]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTYTAGA width=8 seqs=40 chr6:27447498-27447578 ( 41) TTTTTAGA 1 chr11:59315371-59315451 ( 50) TTTTTAGA 1 chr20:55407676-55407756 ( 23) TTTTTAGA 1 chr6:147208465-147208545 ( 5) TTTTTAGA 1 chr1:26034733-26034813 ( 25) TTTTTAGA 1 chr2:238875577-238875657 ( 15) TTTTTAAA 1 chr11:11832443-11832523 ( 23) TTTATAGA 1 chr3:37865749-37865829 ( 1) TTTCTAGA 1 chr7:97884730-97884810 ( 4) TTTATAGA 1 chr7:157100704-157100784 ( 27) TTTCTAGA 1 chr5:119848668-119848748 ( 20) TTTCTAGA 1 chr17:43394622-43394702 ( 54) TTTGTAGA 1 chr14:70163770-70163850 ( 35) TTTTCAGA 1 chr7:12787589-12787669 ( 19) TTTTCAGA 1 chr3:21084782-21084862 ( 73) TTTATAAA 1 chr19:50876301-50876381 ( 8) TTTTGAGA 1 chr1:26963150-26963230 ( 3) TTTATAAA 1 chr20:35787857-35787937 ( 14) TTCTTAGA 1 chr2:55361171-55361251 ( 71) TTTGTAAA 1 chr5:125849906-125849986 ( 71) TTTGTAAA 1 chr11:76758784-76758864 ( 51) TTTGTAAA 1 chr19:55166485-55166565 ( 14) TTTCCAGA 1 chr3:100428094-100428174 ( 18) TTTCGAGA 1 chr4:184270280-184270360 ( 7) TTTAGAGA 1 chr7:38895606-38895686 ( 10) TTTGCAGA 1 chr9:115308572-115308652 ( 65) TTCCTAGA 1 chrX:18693082-18693162 ( 50) TTCATAGA 1 chr6:153323843-153323923 ( 53) TTTGGAGA 1 chr6:164759138-164759218 ( 5) TTTACAAA 1 chr8:98775170-98775250 ( 3) TTTCCAAA 1 chr20:49955283-49955363 ( 39) GTTTTAGA 1 chr6:15896145-15896225 ( 4) GTTTTAGA 1 chr11:35364890-35364970 ( 60) TTCTGAGA 1 chr19:50878139-50878219 ( 66) TTCTGAGA 1 chr6:841685-841765 ( 29) TTTGCAAA 1 chr10:48402465-48402545 ( 72) TTCTGAGA 1 chr6:151550557-151550637 ( 69) TTCCCAGA 1 chr3:32090499-32090579 ( 72) TTCCCAGA 1 chr17:41132112-41132192 ( 9) TCTTTAGA 1 chr1:55230353-55230433 ( 63) TTTCTAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.08256 E= 4.8e-008 -1197 -1197 -261 225 -1197 -356 -1197 229 -1197 -56 -1197 200 -19 -24 -81 100 -1197 -39 -81 159 232 -1197 -1197 -1197 17 -1197 134 -1197 229 -1197 -361 -1197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 40 E= 4.8e-008 0.000000 0.000000 0.050000 0.950000 0.000000 0.025000 0.000000 0.975000 0.000000 0.200000 0.000000 0.800000 0.175000 0.250000 0.175000 0.400000 0.000000 0.225000 0.175000 0.600000 1.000000 0.000000 0.000000 0.000000 0.225000 0.000000 0.775000 0.000000 0.975000 0.000000 0.025000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTYTAGA MEME-5 regular expression -------------------------------------------------------------------------------- TT[TC][TC][TC]A[GA]A -------------------------------------------------------------------------------- Time 17.91 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:34742703-34742783 8.40e-05 48_[+3(2.20e-05)]_24 chr12:50616459-50616539 4.22e-03 23_[+1(3.33e-05)]_15_[+3(3.56e-05)]_\ 26 chr12:12506875-12506955 1.03e-01 80 chr19:52184972-52185052 1.54e-02 40_[+3(4.66e-05)]_32 chr10:73291460-73291540 4.81e-06 20_[+3(4.66e-05)]_3_[+2(3.14e-05)]_\ 6_[+1(3.33e-05)]_27 chr10:124895425-12489550 6.03e-02 61_[+2(8.58e-05)]_11 chr5:169730276-169730356 1.28e-03 50_[+2(3.14e-05)]_22 chr8:99617736-99617816 2.85e-02 20_[+3(5.20e-05)]_52 chr17:41132112-41132192 5.45e-04 45_[+3(1.65e-05)]_27 chr8:22552893-22552973 7.47e-02 80 chr6:68595723-68595803 2.16e-02 54_[+1(1.98e-05)]_18 chr20:35787857-35787937 8.35e-07 13_[+5(4.51e-05)]_38_[+2(3.14e-05)]_\ [+3(2.20e-05)]_5 chr14:75760968-75761048 2.96e-02 44_[+3(4.66e-05)]_28 chr5:139641076-139641156 2.29e-03 80 chr11:76758784-76758864 5.60e-07 16_[+3(7.41e-05)]_4_[+2(1.90e-05)]_\ 6_[+4(1.91e-05)]_[+5(4.89e-05)]_22 chr10:64576430-64576510 1.07e-03 80 chr5:119848668-119848748 2.65e-04 19_[+5(1.58e-05)]_53 chr5:133450195-133450275 5.08e-03 80 chr5:137827830-137827910 1.28e-01 80 chr10:48402465-48402545 3.92e-04 16_[+1(6.27e-05)]_29_[+3(8.51e-05)]_\ 19 chr9:33165892-33165972 4.21e-02 36_[+1(1.98e-05)]_36 chr17:79428118-79428198 7.97e-03 10_[+3(4.66e-05)]_62 chr7:73548737-73548817 3.06e-04 10_[+1(1.98e-05)]_2_[+3(3.01e-05)]_\ 52 chr19:19256963-19257043 1.20e-02 23_[+1(1.98e-05)]_49 chr7:130756926-130757006 2.51e-06 20_[+1(1.98e-05)]_2_[+3(3.01e-05)]_\ 42 chr11:61872733-61872813 1.70e-06 6_[+4(1.91e-05)]_4_[+1(1.98e-05)]_2_\ [+3(3.01e-05)]_44 chr6:15896145-15896225 7.55e-08 11_[+3(7.41e-05)]_4_[+2(1.90e-05)]_\ 6_[+4(3.16e-05)]_35 chr6:126240288-126240368 1.60e-02 80 chr8:42270484-42270564 1.74e-01 80 chr1:203259757-203259837 1.63e-02 51_[+3(1.65e-05)]_21 chr8:110391470-110391550 1.20e-03 80 chr11:65477372-65477452 1.14e-04 20_[+4(1.91e-05)]_4_[+1(3.33e-05)]_\ 40 chr21:34753049-34753129 1.16e-02 42_[+1(7.57e-05)]_30 chr1:86042701-86042781 8.63e-04 6_[+3(2.20e-05)]_66 chr7:157100704-157100784 1.19e-08 26_[+5(1.58e-05)]_[+3(5.49e-06)]_4_\ [+2(3.14e-05)]_6_[+4(1.91e-05)]_[+5(4.89e-05)]_4 chr12:833750-833830 9.24e-03 42_[+3(1.65e-05)]_30 chr19:55166485-55166565 5.82e-02 13_[+5(6.67e-05)]_24_[+5(6.67e-05)]_\ 27 chr7:2119369-2119449 7.99e-04 33_[+3(7.96e-05)]_39 chr11:95976499-95976579 2.01e-03 39_[+2(3.14e-05)]_33 chr1:52137692-52137772 2.09e-03 28_[+1(3.33e-05)]_44 chr5:125849906-125849986 5.92e-07 36_[+3(7.41e-05)]_4_[+2(3.14e-05)]_\ 6_[+4(1.91e-05)]_[+5(4.89e-05)]_2 chr10:6186820-6186900 8.55e-02 10_[+3(2.20e-05)]_62 chr19:40926879-40926959 2.96e-03 19_[+2(8.58e-05)]_53 chr5:137800766-137800846 1.56e-03 69_[+2(8.58e-05)]_3 chr7:12787589-12787669 1.20e-04 18_[+5(2.74e-05)]_12_[+2(3.14e-05)]_\ 14_[+5(4.89e-05)]_12 chr10:112257556-11225763 1.90e-02 28_[+3(4.66e-05)]_2_[+3(1.65e-05)]_\ 34 chr22:41260175-41260255 6.93e-06 33_[+3(7.41e-05)]_4_[+2(3.14e-05)]_\ 6_[+4(1.91e-05)]_13 chr20:49955283-49955363 4.63e-06 46_[+3(1.10e-05)]_4_[+2(8.58e-05)]_\ 14 chr3:45103633-45103713 6.09e-04 8_[+1(3.33e-05)]_2_[+3(1.65e-05)]_\ 54 chr14:74227013-74227093 6.75e-04 36_[+2(3.14e-05)]_3_[+3(4.66e-05)]_\ 25 chr2:55361171-55361251 1.29e-06 35_[+3(5.49e-06)]_4_[+2(8.58e-05)]_\ 15_[+5(4.89e-05)]_2 chr12:52445110-52445190 8.26e-01 80 chr6:841685-841765 1.29e-07 19_[+4(3.16e-05)]_11_[+4(1.91e-05)]_\ 4_[+1(3.33e-05)]_2_[+3(3.01e-05)]_12 chr1:26034733-26034813 3.69e-09 24_[+5(3.82e-06)]_[+3(5.49e-06)]_4_\ [+2(3.14e-05)]_6_[+4(1.91e-05)]_[+5(3.94e-05)]_6 chr6:158402531-158402611 4.94e-03 54_[+3(1.10e-05)]_18 chr1:26963150-26963230 3.71e-07 2_[+5(3.94e-05)]_24_[+3(3.01e-05)]_\ 38 chr20:61023288-61023368 2.48e-04 44_[+3(4.66e-05)]_4_[+2(3.14e-05)]_\ 16 chr1:43222782-43222862 1.73e-02 12_[+1(1.98e-05)]_60 chr17:53894871-53894951 1.63e-01 80 chr20:626286-626366 6.84e-02 59_[+2(1.90e-05)]_13 chr1:159047115-159047195 4.29e-02 80 chr19:42829587-42829667 8.50e-04 11_[+1(1.98e-05)]_61 chr5:74532783-74532863 4.19e-02 24_[+1(1.98e-05)]_48 chr9:88969311-88969391 1.35e-01 54_[+2(1.90e-05)]_18 chr19:50169078-50169158 5.55e-02 80 chr9:130981128-130981208 1.23e-01 32_[+2(1.90e-05)]_40 chr17:16189437-16189517 1.49e-02 47_[+3(4.66e-05)]_25 chr19:50819466-50819546 6.23e-02 65_[+2(8.58e-05)]_7 chr19:50876301-50876381 4.39e-04 7_[+5(3.94e-05)]_24_[+3(2.20e-05)]_\ 33 chr19:50878139-50878219 1.04e-06 9_[+4(1.91e-05)]_4_[+1(3.33e-05)]_2_\ [+3(3.01e-05)]_41 chr19:17001455-17001535 1.41e-03 80 chr1:169278661-169278741 6.90e-05 18_[+4(3.16e-05)]_11_[+4(3.16e-05)]_\ 35 chr1:28995168-28995248 1.47e-02 63_[+1(1.98e-05)]_9 chr2:187440140-187440220 1.94e-02 15_[+3(7.96e-05)]_57 chr22:21983637-21983717 7.70e-02 20_[+1(6.27e-05)]_52 chr1:229416455-229416535 3.71e-04 80 chr10:16859445-16859525 2.20e-02 37_[+3(8.51e-05)]_35 chr1:100232144-100232224 2.10e-02 44_[+2(1.90e-05)]_28 chrX:18693082-18693162 1.04e-03 80 chr10:72124400-72124480 2.14e-02 5_[+2(8.58e-05)]_67 chr11:126350733-12635081 9.96e-02 48_[+2(8.58e-05)]_24 chr1:11967904-11967984 3.68e-03 38_[+3(9.43e-05)]_34 chr5:67730242-67730322 1.57e-03 80 chr6:28129480-28129560 3.67e-04 26_[+2(8.58e-05)]_8_[+1(1.98e-05)]_\ 30 chrX:15873125-15873205 1.25e-01 24_[+1(6.27e-05)]_13_[+1(6.27e-05)]_\ 27 chr4:10118472-10118552 7.21e-04 24_[+1(6.27e-05)]_33_[+3(5.49e-06)]_\ 7 chr19:14800814-14800894 4.13e-02 41_[+1(6.27e-05)]_31 chr1:36181227-36181307 1.41e-01 80 chr8:98775170-98775250 5.54e-07 11_[+4(1.91e-05)]_4_[+1(3.33e-05)]_\ 49 chr7:6746598-6746678 4.89e-02 42_[+1(1.98e-05)]_30 chr9:77567830-77567910 1.76e-01 63_[+1(1.98e-05)]_9 chr2:145338316-145338396 2.54e-02 20_[+3(4.66e-05)]_52 chr14:70163770-70163850 7.27e-06 34_[+5(2.74e-05)]_[+3(7.41e-05)]_30 chr7:97884730-97884810 9.67e-09 3_[+5(1.58e-05)]_2_[+4(1.91e-05)]_4_\ [+1(3.33e-05)]_2_[+3(3.01e-05)]_37 chr22:31480916-31480996 2.46e-02 21_[+3(1.10e-05)]_51 chr12:498451-498531 9.15e-03 15_[+1(1.98e-05)]_57 chr14:56665962-56666042 3.67e-03 21_[+3(4.66e-05)]_51 chr19:1174247-1174327 1.33e-01 33_[+2(1.90e-05)]_39 chr4:184270280-184270360 5.41e-07 6_[+5(8.89e-05)]_24_[+3(3.01e-05)]_\ 34 chr3:21084782-21084862 3.39e-05 41_[+5(2.74e-05)]_[+3(7.41e-05)]_4_\ [+2(3.14e-05)]_3_[+5(3.94e-05)] chr10:16478964-16479044 2.51e-03 42_[+1(1.98e-05)]_30 chr18:12904071-12904151 6.76e-06 11_[+4(1.91e-05)]_4_[+1(3.33e-05)]_\ 49 chr19:13262665-13262745 2.11e-03 2_[+3(7.41e-05)]_6_[+1(6.27e-05)]_\ 56 chr2:208637330-208637410 5.24e-03 11_[+1(3.33e-05)]_61 chr3:100428094-100428174 3.67e-03 17_[+5(8.89e-05)]_3_[+1(1.98e-05)]_\ 44 chr6:147208465-147208545 4.20e-08 4_[+5(3.82e-06)]_[+3(7.41e-05)]_4_\ [+2(3.14e-05)]_6_[+4(1.91e-05)]_[+5(4.89e-05)]_26 chr17:80606276-80606356 8.32e-02 36_[+1(1.98e-05)]_36 chr22:27068933-27069013 8.56e-03 39_[+1(1.98e-05)]_24_[+1(6.27e-05)]_\ 1 chr16:3661694-3661774 4.42e-02 41_[+2(8.58e-05)]_31 chr13:115079776-11507985 3.04e-02 17_[+2(1.90e-05)]_55 chrX:13752805-13752885 5.77e-04 47_[+1(1.98e-05)]_25 chr20:55407676-55407756 1.24e-08 22_[+5(3.82e-06)]_[+3(1.10e-05)]_4_\ [+2(3.14e-05)]_6_[+4(1.91e-05)]_16 chr12:9917418-9917498 1.95e-04 21_[+3(1.65e-05)]_51 chr6:164759138-164759218 3.82e-06 26_[+1(3.33e-05)]_2_[+3(3.01e-05)]_\ 36 chr11:108093717-10809379 3.05e-02 62_[+1(6.27e-05)]_10 chr1:174933690-174933770 2.07e-03 80 chr17:43394622-43394702 5.02e-04 21_[+5(6.67e-05)]_10_[+2(8.58e-05)]_\ 6_[+5(2.17e-05)]_19 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44_[+2(8.58e-05)]_8_[+1(6.27e-05)]_\ 12 chr6:90348418-90348498 2.54e-01 80 chr13:111365354-11136543 3.98e-01 80 chr1:40506343-40506423 5.56e-03 6_[+2(8.58e-05)]_25_[+1(1.98e-05)]_\ 33 chr17:41755425-41755505 1.63e-02 70_[+1(1.98e-05)]_2 chr9:139294636-139294716 1.77e-02 29_[+1(1.98e-05)]_43 chrX:153626441-153626521 8.50e-02 29_[+1(6.27e-05)]_43 chr6:151550557-151550637 1.14e-05 4_[+1(3.33e-05)]_2_[+3(3.01e-05)]_\ 58 chr8:59323818-59323898 9.53e-01 80 chr18:39535067-39535147 2.67e-01 80 chrX:48815616-48815696 3.56e-02 30_[+2(1.90e-05)]_42 chr19:57901063-57901143 2.98e-04 9_[+3(1.10e-05)]_26_[+1(6.27e-05)]_\ 29 chr21:36118008-36118088 7.10e-02 80 chr11:11832443-11832523 1.50e-04 22_[+5(1.58e-05)]_50 chr7:111846530-111846610 4.75e-02 47_[+1(1.98e-05)]_25 chr4:140216966-140217046 1.17e-01 44_[+1(1.98e-05)]_28 chr16:70557427-70557507 2.45e-02 24_[+2(1.90e-05)]_48 chr3:124620298-124620378 4.64e-02 4_[+1(1.98e-05)]_68 chr15:40615727-40615807 2.19e-03 43_[+2(1.90e-05)]_29 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9.88e-03 27_[+2(8.58e-05)]_22_[+2(8.58e-05)]_\ 15 chr20:49347596-49347676 5.01e-02 39_[+2(8.58e-05)]_33 chr8:146012747-146012827 8.57e-01 80 chr9:131644302-131644382 7.26e-01 80 chr2:183989030-183989110 2.15e-02 43_[+1(1.98e-05)]_29 chr10:43633845-43633925 2.06e-02 36_[+1(1.98e-05)]_36 chr12:122125034-12212511 1.04e-01 49_[+1(1.98e-05)]_23 chr19:16653286-16653366 1.11e-02 53_[+1(1.98e-05)]_19 chr7:38895606-38895686 8.26e-05 34_[+3(1.65e-05)]_38 chr19:4457886-4457966 2.68e-01 80 chr5:158690220-158690300 2.77e-03 40_[+2(1.90e-05)]_32 chr1:154976629-154976709 2.30e-03 16_[+1(1.98e-05)]_38_[+2(8.58e-05)]_\ 10 chr7:5085396-5085476 6.51e-02 24_[+2(1.90e-05)]_48 chr6:70506707-70506787 2.36e-03 70_[+2(8.58e-05)]_2 chr5:1345188-1345268 2.90e-02 18_[+1(1.98e-05)]_54 chr20:43104497-43104577 7.87e-02 19_[+2(1.90e-05)]_53 chr7:92077821-92077901 1.53e-02 61_[+2(1.90e-05)]_11 chr7:75157478-75157558 3.45e-02 35_[+1(1.98e-05)]_37 chr6:27447498-27447578 1.06e-04 40_[+5(3.82e-06)]_7_[+2(1.90e-05)]_\ 17 chr19:8578760-8578840 5.08e-02 16_[+1(1.98e-05)]_56 chr7:44084197-44084277 1.45e-01 80 chr13:111805951-11180603 1.44e-02 42_[+2(1.90e-05)]_11_[+2(3.14e-05)]_\ 11 chr12:56584072-56584152 1.37e-01 80 chr6:97345836-97345916 8.94e-03 70_[+2(8.58e-05)]_2 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n09.farnam.hpc.yale.internal ********************************************************************************