******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/CTCFL.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr6:130686575-130686655 1.0000 80 chr12:53605709-53605789 1.0000 80 chr12:54785165-54785245 1.0000 80 chr7:25935122-25935202 1.0000 80 chr6:33382552-33382632 1.0000 80 chr19:3429642-3429722 1.0000 80 chr1:46998626-46998706 1.0000 80 chr18:7567210-7567290 1.0000 80 chr4:140973401-140973481 1.0000 80 chr12:51984631-51984711 1.0000 80 chr5:176883491-176883571 1.0000 80 chr17:53045584-53045664 1.0000 80 chr19:6218637-6218717 1.0000 80 chr11:61250155-61250235 1.0000 80 chr22:19741155-19741235 1.0000 80 chr3:46759398-46759478 1.0000 80 chr16:28502797-28502877 1.0000 80 chr2:20442136-20442216 1.0000 80 chr17:73611635-73611715 1.0000 80 chr9:96075009-96075089 1.0000 80 chr14:74225153-74225233 1.0000 80 chr2:173539564-173539644 1.0000 80 chr2:24387405-24387485 1.0000 80 chr9:34675208-34675288 1.0000 80 chr21:43267697-43267777 1.0000 80 chr15:74913553-74913633 1.0000 80 chr21:47300478-47300558 1.0000 80 chr19:39209645-39209725 1.0000 80 chr9:133576581-133576661 1.0000 80 chr19:47232153-47232233 1.0000 80 chr4:3454337-3454417 1.0000 80 chr22:41418305-41418385 1.0000 80 chr1:55267236-55267316 1.0000 80 chr16:89976842-89976922 1.0000 80 chr11:102139574-10213965 1.0000 80 chr3:129062899-129062979 1.0000 80 chrX:48828895-48828975 1.0000 80 chr17:73236864-73236944 1.0000 80 chr5:76941438-76941518 1.0000 80 chr9:126803395-126803475 1.0000 80 chr5:33589007-33589087 1.0000 80 chr9:134615526-134615606 1.0000 80 chr11:61519927-61520007 1.0000 80 chr17:26839313-26839393 1.0000 80 chr7:129795018-129795098 1.0000 80 chr12:121881173-12188125 1.0000 80 chr17:36819488-36819568 1.0000 80 chr11:46413583-46413663 1.0000 80 chr8:144130371-144130451 1.0000 80 chr16:58034660-58034740 1.0000 80 chr18:3063112-3063192 1.0000 80 chr6:151186763-151186843 1.0000 80 chr22:23197998-23198078 1.0000 80 chr12:53441134-53441214 1.0000 80 chr15:80527309-80527389 1.0000 80 chr16:30969594-30969674 1.0000 80 chr5:14872039-14872119 1.0000 80 chr6:32053714-32053794 1.0000 80 chr1:203024466-203024546 1.0000 80 chr7:150753479-150753559 1.0000 80 chr21:47745290-47745370 1.0000 80 chr14:100259569-10025964 1.0000 80 chr18:12328047-12328127 1.0000 80 chr11:66131513-66131593 1.0000 80 chr6:34158054-34158134 1.0000 80 chr16:58232055-58232135 1.0000 80 chr1:27659417-27659497 1.0000 80 chr11:47182749-47182829 1.0000 80 chr9:131769174-131769254 1.0000 80 chr7:6677464-6677544 1.0000 80 chr5:125937001-125937081 1.0000 80 chr19:41858518-41858598 1.0000 80 chr4:40553024-40553104 1.0000 80 chr3:167458924-167459004 1.0000 80 chr5:982729-982809 1.0000 80 chr19:1837735-1837815 1.0000 80 chr21:38120182-38120262 1.0000 80 chr20:56101733-56101813 1.0000 80 chr8:74207225-74207305 1.0000 80 chr19:18561862-18561942 1.0000 80 chr12:133345121-13334520 1.0000 80 chr19:35633944-35634024 1.0000 80 chr6:33179584-33179664 1.0000 80 chr10:112316932-11231701 1.0000 80 chr6:37528355-37528435 1.0000 80 chr16:21611268-21611348 1.0000 80 chr1:11397717-11397797 1.0000 80 chr8:143632630-143632710 1.0000 80 chr21:44271040-44271120 1.0000 80 chr9:130587982-130588062 1.0000 80 chr11:109963836-10996391 1.0000 80 chr22:42353770-42353850 1.0000 80 chr3:128564862-128564942 1.0000 80 chr6:144263398-144263478 1.0000 80 chr3:12917580-12917660 1.0000 80 chr8:11365876-11365956 1.0000 80 chr6:29596541-29596621 1.0000 80 chr12:57943759-57943839 1.0000 80 chr16:2867170-2867250 1.0000 80 chr5:153570299-153570379 1.0000 80 chr4:3075347-3075427 1.0000 80 chr19:18272238-18272318 1.0000 80 chr7:50198891-50198971 1.0000 80 chr17:32907798-32907878 1.0000 80 chr16:88695227-88695307 1.0000 80 chr11:4203457-4203537 1.0000 80 chr1:6142512-6142592 1.0000 80 chr1:181999181-181999261 1.0000 80 chr19:42733570-42733650 1.0000 80 chr7:131231528-131231608 1.0000 80 chrX:53106835-53106915 1.0000 80 chr1:110602842-110602922 1.0000 80 chr19:51611068-51611148 1.0000 80 chr17:33416456-33416536 1.0000 80 chr7:134923074-134923154 1.0000 80 chr9:129276616-129276696 1.0000 80 chr11:64397612-64397692 1.0000 80 chr1:22965917-22965997 1.0000 80 chr3:129047664-129047744 1.0000 80 chr15:41222866-41222946 1.0000 80 chr12:113612328-11361240 1.0000 80 chr1:156389826-156389906 1.0000 80 chr12:48166879-48166959 1.0000 80 chr17:73521073-73521153 1.0000 80 chr11:61504748-61504828 1.0000 80 chr14:23525497-23525577 1.0000 80 chr1:40075410-40075490 1.0000 80 chr6:42228803-42228883 1.0000 80 chr19:46367431-46367511 1.0000 80 chr3:195293812-195293892 1.0000 80 chr1:27693049-27693129 1.0000 80 chr20:633996-634076 1.0000 80 chr15:40799388-40799468 1.0000 80 chr15:40812058-40812138 1.0000 80 chr1:205554110-205554190 1.0000 80 chr14:23322796-23322876 1.0000 80 chr1:208267261-208267341 1.0000 80 chr9:504432-504512 1.0000 80 chr10:71168440-71168520 1.0000 80 chr2:17081835-17081915 1.0000 80 chrX:16901121-16901201 1.0000 80 chr6:36807772-36807852 1.0000 80 chr6:26087686-26087766 1.0000 80 chr19:41814558-41814638 1.0000 80 chr16:18995186-18995266 1.0000 80 chr20:48100834-48100914 1.0000 80 chr19:49501399-49501479 1.0000 80 chr7:151329531-151329611 1.0000 80 chr7:98030614-98030694 1.0000 80 chr11:119612146-11961222 1.0000 80 chr5:149555249-149555329 1.0000 80 chr11:19139032-19139112 1.0000 80 chr3:126108267-126108347 1.0000 80 chr19:18977470-18977550 1.0000 80 chr1:162597658-162597738 1.0000 80 chr9:134269322-134269402 1.0000 80 chr10:121362148-12136222 1.0000 80 chr12:133137901-13313798 1.0000 80 chr2:65215934-65216014 1.0000 80 chr16:30420925-30421005 1.0000 80 chr2:95540090-95540170 1.0000 80 chr1:86047048-86047128 1.0000 80 chr4:155548050-155548130 1.0000 80 chr11:120081772-12008185 1.0000 80 chr1:114472638-114472718 1.0000 80 chr17:73996655-73996735 1.0000 80 chr10:82295740-82295820 1.0000 80 chr8:21946566-21946646 1.0000 80 chr2:190627902-190627982 1.0000 80 chr11:44654482-44654562 1.0000 80 chr7:135389015-135389095 1.0000 80 chr16:30996405-30996485 1.0000 80 chr17:79977942-79978022 1.0000 80 chr5:176037179-176037259 1.0000 80 chr12:50156937-50157017 1.0000 80 chr7:100202417-100202497 1.0000 80 chr16:1388274-1388354 1.0000 80 chr1:156326859-156326939 1.0000 80 chr2:17329730-17329810 1.0000 80 chr2:86116251-86116331 1.0000 80 chr9:136223794-136223874 1.0000 80 chr5:61064712-61064792 1.0000 80 chr1:156594277-156594357 1.0000 80 chr21:36007762-36007842 1.0000 80 chr1:12061785-12061865 1.0000 80 chr6:30690535-30690615 1.0000 80 chr12:53273412-53273492 1.0000 80 chr10:106113459-10611353 1.0000 80 chr19:56821092-56821172 1.0000 80 chr5:54523149-54523229 1.0000 80 chr1:150952079-150952159 1.0000 80 chr11:36766271-36766351 1.0000 80 chr1:1284753-1284833 1.0000 80 chr6:25153434-25153514 1.0000 80 chr17:1552238-1552318 1.0000 80 chr16:3078344-3078424 1.0000 80 chr9:127557338-127557418 1.0000 80 chr11:75236970-75237050 1.0000 80 chr19:14542865-14542945 1.0000 80 chr7:127660362-127660442 1.0000 80 chr22:42062784-42062864 1.0000 80 chr12:67835717-67835797 1.0000 80 chr20:49204808-49204888 1.0000 80 chr19:41312928-41313008 1.0000 80 chr8:131694243-131694323 1.0000 80 chr16:30662746-30662826 1.0000 80 chr1:207108958-207109038 1.0000 80 chr15:59430542-59430622 1.0000 80 chr7:1680144-1680224 1.0000 80 chr17:79071324-79071404 1.0000 80 chr2:202969133-202969213 1.0000 80 chr7:100289420-100289500 1.0000 80 chr17:80509849-80509929 1.0000 80 chr17:37202316-37202396 1.0000 80 chr4:170696073-170696153 1.0000 80 chr5:179636202-179636282 1.0000 80 chr19:38716994-38717074 1.0000 80 chr4:74124280-74124360 1.0000 80 chr16:12354575-12354655 1.0000 80 chr19:50184091-50184171 1.0000 80 chr6:37673331-37673411 1.0000 80 chr19:39964918-39964998 1.0000 80 chr3:135969152-135969232 1.0000 80 chr2:12188823-12188903 1.0000 80 chr16:87883708-87883788 1.0000 80 chr19:8570634-8570714 1.0000 80 chr3:123166937-123167017 1.0000 80 chr8:72917539-72917619 1.0000 80 chr17:36886363-36886443 1.0000 80 chr1:17746474-17746554 1.0000 80 chr1:1307568-1307648 1.0000 80 chr12:56099748-56099828 1.0000 80 chr16:84992792-84992872 1.0000 80 chr22:23152602-23152682 1.0000 80 chr2:42411661-42411741 1.0000 80 chr3:58449549-58449629 1.0000 80 chr16:81069303-81069383 1.0000 80 chr1:249120862-249120942 1.0000 80 chr7:2594900-2594980 1.0000 80 chr19:33793459-33793539 1.0000 80 chr3:9904401-9904481 1.0000 80 chr17:75370600-75370680 1.0000 80 chr9:37411425-37411505 1.0000 80 chr3:38688224-38688304 1.0000 80 chr3:184063599-184063679 1.0000 80 chr1:33358623-33358703 1.0000 80 chr3:183959795-183959875 1.0000 80 chr1:166134256-166134336 1.0000 80 chr16:2053965-2054045 1.0000 80 chr10:88109395-88109475 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_CTCFL/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/CTCFL.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.153 C 0.346 G 0.348 T 0.153 Background letter frequencies (from file dataset with add-one prior applied): A 0.153 C 0.346 G 0.348 T 0.153 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CGCCCCCT MEME-1 width = 8 sites = 122 llr = 907 E-value = 6.7e-069 ******************************************************************************** -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::::1::: pos.-specific C 6:aa88a: probability G 19:::::: matrix T 31::12:a bits 2.7 * 2.4 * 2.2 * 1.9 * Relative 1.6 ** ** Entropy 1.4 ** ** (10.7 bits) 1.1 *** *** 0.8 ******* 0.5 ******** 0.3 ******** 0.0 -------- Multilevel CGCCCCCT consensus T T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:183959795-183959875 36 1.32e-04 GTGTGAAGGC TGCCCCCT GCTGCTTGGG chr1:33358623-33358703 50 1.32e-04 AGCGCAGTGC CGCCCCCT TGGCCCGGCG chr9:37411425-37411505 34 1.32e-04 CTCCCTGGGC TGCCCCCT GTTGGTCATG chr19:33793459-33793539 27 1.32e-04 CAGGCCGCGT CGCCCCCT AGAGTCCGAG chr2:42411661-42411741 28 1.32e-04 CCCCTTACTG CGCCCCCT ACATGGATTC chr5:179636202-179636282 17 1.32e-04 CGCGGCGCTG CGCCCCCT CGTGGCACTC chr4:170696073-170696153 13 1.32e-04 GGTTCCCACG CGCCCCCT AGGGTGGGTG chr7:100289420-100289500 28 1.32e-04 TTTGAAAGAC TGCCCCCT GCCGGAGACA chr17:79071324-79071404 37 1.32e-04 CAGGGGAGGC CGCCCCCT TGCGGAGGCC chr20:49204808-49204888 1 1.32e-04 . TGCCCCCT GGCTGCTCCT chr7:127660362-127660442 52 1.32e-04 ctgtaaatgg cgccccct ggagttgtAA chr11:36766271-36766351 34 1.32e-04 ATGTGAATGG CGCCCCCT GGTGTGGCAT chr2:86116251-86116331 32 1.32e-04 CAGAGCAGGG CGCCCCCT GCAGGGACGC chr11:44654482-44654562 20 1.32e-04 gagtcagccc tgccccct gccgggccct chr2:190627902-190627982 28 1.32e-04 AATCTAGCGG CGCCCCCT AGCAGGGTTA chr1:86047048-86047128 30 1.32e-04 TGCCTGCCAC TGCCCCCT GGAGGCGCCC chr16:30420925-30421005 39 1.32e-04 AATGCTCTGC TGCCCCCT AGTGGGCCTG chr12:133137901-13313798 34 1.32e-04 GTGTCTGGGG CGCCCCCT TGTGGCCCTG chr10:121362148-12136222 42 1.32e-04 gagcaaagac tgccccct agaggagtcc chr1:162597658-162597738 30 1.32e-04 aaggtgacTC TGCCCCCT AGGGGTTTGT chr19:18977470-18977550 25 1.32e-04 CGAGGCCGAG CGCCCCCT GCTGGCCCGC chr3:126108267-126108347 53 1.32e-04 TTCGCCCGTC TGCCCCCT AGCGCCCTGC chr11:19139032-19139112 44 1.32e-04 CTGGCCAGGG CGCCCCCT GGGGCCGGTA chr7:98030614-98030694 27 1.32e-04 GGCCACGGTG CGCCCCCT CGCGGCTCTC chr1:205554110-205554190 29 1.32e-04 CCTCAGAGGG CGCCCCCT ACTGGGGGAC chr7:134923074-134923154 44 1.32e-04 GTGGGAAGTC TGCCCCCT ATGGGGGAGG chr17:33416456-33416536 23 1.32e-04 CCTCCGCTCG CGCCCCCT GGCGGAGCTG chr1:110602842-110602922 37 1.32e-04 GACACCAGTG CGCCCCCT GCTGGTGGGG chrX:53106835-53106915 30 1.32e-04 TGAGGACTCA CGCCCCCT GCTGGGGCAC chr7:131231528-131231608 20 1.32e-04 TGAAGGGCAG TGCCCCCT AGGGGTGAGC chr1:181999181-181999261 38 1.32e-04 GGTCAGGCGC CGCCCCCT TGTGGTCTCG chr22:42353770-42353850 49 1.32e-04 GCGCATGCAG CGCCCCCT GGTGGACCGC chr8:143632630-143632710 29 1.32e-04 AGCCAGAGCC CGCCCCCT GCTGGCTTGG chr5:982729-982809 29 1.32e-04 GGGCCGGGGA TGCCCCCT AGCGGACTGG chr19:41858518-41858598 29 1.32e-04 GGCACTCCGG CGCCCCCT GGGGGCCCCC chr7:6677464-6677544 40 1.32e-04 CGGCTCCGGA CGCCCCCT GGGGGGCGGG chr9:131769174-131769254 18 1.32e-04 ACGCTGCAGA CGCCCCCT AGAGGAACTT chr11:47182749-47182829 16 1.32e-04 GGGAGGATAC TGCCCCCT TGTGGGGGCC chr16:58232055-58232135 41 1.32e-04 AGGCTCACAG CGCCCCCT GGAGCGCGGG chr14:100259569-10025964 36 1.32e-04 ccgccgaggc cgccccct cgcgggcgga chr6:151186763-151186843 49 1.32e-04 CCGGGTGCAG TGCCCCCT AGGGGCCCCT chr16:58034660-58034740 21 1.32e-04 ggagcgaggc CGCCCCCT GCCGGGGACC chr11:46413583-46413663 32 1.32e-04 GGGGACGCGG CGCCCCCT CGCGGGCTGG chr17:36819488-36819568 36 1.32e-04 gctgctgtgc tgccccct agggccctgc chr17:26839313-26839393 38 1.32e-04 TTCTGAACAC TGCCCCCT GGAAGGATCA chr9:134615526-134615606 17 1.32e-04 gccgccacag cGCCCCCT GTGGGCCCGG chr9:126803395-126803475 41 1.32e-04 CGGACGAGGG CGCCCCCT GGCGGGGCAC chr17:73236864-73236944 10 1.32e-04 TGCCCCTGA CGCCCCCT GTGGGCCGCA chr16:89976842-89976922 33 1.32e-04 GCTGCTGCTC TGCCCCCT GGCGGCCCCT chr4:3454337-3454417 68 1.32e-04 ccaagcctgc tgccccct gggtt chr19:47232153-47232233 26 1.32e-04 TGCCCTGGAG CGCCCCCT GCTGGGCCTT chr21:47300478-47300558 26 1.32e-04 atacatactg cgccccct tgtgggccaa chr2:24387405-24387485 13 1.32e-04 ACGATGAGGG TGCCCCCT GGTGGAGCCA chr11:61250155-61250235 18 1.32e-04 CCAGAGCTAC CGCCCCCT GGAGGTGCCT chr5:176883491-176883571 40 1.32e-04 AGGGTGAGGA CGCCCCCT GGTGGCAAGG chr12:51984631-51984711 24 1.32e-04 TCCCGCGCGG CGCCCCCT GCCGGCGCCC chr19:3429642-3429722 33 1.32e-04 CAGTCCGTGC TGCCCCCT GGGGGCCGGG chr7:25935122-25935202 25 1.32e-04 AAATGAAACT CGCCCCCT GCTGGCCCGC chr8:72917539-72917619 39 1.90e-04 CGTTTCTCGG CGCCCTCT CCTGGGTCAG chr19:50184091-50184171 37 1.90e-04 TGGTCTCTGC CGCCCTCT AGTGACCGGC chr12:67835717-67835797 27 1.90e-04 ATGGGGAAGG CGCCCTCT TGTGGAACTC chr1:150952079-150952159 69 1.90e-04 TGGCTGCTGA CGCCCTCT TGTG chr19:56821092-56821172 10 1.90e-04 TGCGGGGCG CGCCCTCT AGTGGGAGGT chr12:53273412-53273492 52 1.90e-04 GGCAATGTGG CGCCCTCT GCGGGGAGCC chr19:41814558-41814638 34 1.90e-04 TGGGCTACAG CGCCCTCT GCTGGCCTCT chr10:71168440-71168520 43 1.90e-04 TTCTCCCGGG CGCCCTCT TGCGGACCGG chr3:195293812-195293892 36 1.90e-04 AGGAGCCAAA TGCCCTCT GGCGGGGGGC chr1:40075410-40075490 45 1.90e-04 gtgttcaaag cgccctct ggcggccggg chr12:113612328-11361240 35 1.90e-04 GCTCTCGTGC TGCCCTCT AGTGACTGCA chr6:29596541-29596621 33 1.90e-04 AGCACCCTGC CGCCCTCT GCTGGGCTCT chr3:128564862-128564942 38 1.90e-04 CACGGACTGG CGCCCTCT GCAGGTCCCG chr4:40553024-40553104 19 1.90e-04 CTGAACAAGC TGCCCTCT TGTGGTTCTG chr22:41418305-41418385 24 1.90e-04 CCTGGGCCGG CGCCCTCT CTCGGCGCAG chr15:74913553-74913633 61 1.90e-04 CTCTGTTTGG TGCCCTCT ATCGATCGTC chr18:7567210-7567290 27 1.90e-04 cgggcgctca cgccctct agcgggccgc chr17:80509849-80509929 37 3.06e-04 GGGCCCTGGG CTCCCCCT TGTGGAGTCC chr16:3078344-3078424 32 3.06e-04 CCTGCGTGAG CGCCACCT TCTGGCGGAT chr6:30690535-30690615 39 3.06e-04 AGACGTCTGC TGCCACCT GGTGGCGGGA chr11:120081772-12008185 64 3.06e-04 CGTGCGTCCG CGCCACCT CGCGGGCGA chr5:149555249-149555329 37 3.06e-04 GTGGAGAGCC CTccccct ggtggtacag chr11:119612146-11961222 22 3.06e-04 ACGGGCACGG CGCCACCT AGCGGTCGTG chr20:48100834-48100914 28 3.06e-04 GGCAGGACGG CGCCACCT GCGGGTCGGA chr2:17081835-17081915 1 3.06e-04 . cgccacct gcaggctgag chr1:208267261-208267341 27 3.06e-04 TGCAGTCTGG CGCCACCT GGTGGGGCTC chr15:40799388-40799468 38 3.06e-04 GTGGGAGCGG CTCCCCCT GCAGGATCTG chr17:73521073-73521153 37 3.06e-04 TGGCGAGAGG CGCCACCT GCAGCTGGGC chr1:156389826-156389906 68 3.06e-04 GGCTTCCTTG CTCCCCCT CAACT chr16:30969594-30969674 25 3.06e-04 CCCGAAGAGG TGCCACCT TTCGGCCGGA chr18:3063112-3063192 37 3.06e-04 gactgacagg ctccccct gctgggctgc chr12:121881173-12188125 26 3.06e-04 AGACTCCTGG CGCCACCT TGTGGCTGGT chr19:39209645-39209725 32 3.06e-04 CCGGGCCTGG CTCCCCCT GCAGGAGCGC chr2:173539564-173539644 34 3.06e-04 GCGTCCAAGG CGCCACCT TGCGGGGACA chr14:74225153-74225233 33 3.06e-04 CCTGGCCAGG CTCCCCCT GCTGGAGCAA chr22:19741155-19741235 32 3.06e-04 GCAAGTGTGG CTCCCCCT GCTGGGGCCA chr6:33382552-33382632 12 3.06e-04 GCTCGGATGC CTCCCCCT GTGGAGCCCC chr22:23197998-23198078 35 3.58e-04 CCTCAGGATC CTCCCTCT GAGGCCACCA chr19:41312928-41313008 30 4.16e-04 GCAGACGCTG CGCCTCCT AGTGGGCTCC chr9:130587982-130588062 27 4.16e-04 TCAGGATGTG CGCCTCCT TGTGGCCGGC chr5:125937001-125937081 44 4.16e-04 CGAGCCCTGG CGCCTCCT GGAGGCCGGC chr1:203024466-203024546 35 4.16e-04 CGACCCGCAC TGCCTCCT GCTGGTCCTG chr2:12188823-12188903 48 4.82e-04 gtggctccag agccccct agagggccag chr15:40812058-40812138 1 4.82e-04 . AGCCCCCT TGTGGGTCCC chr19:42733570-42733650 58 4.82e-04 CCAGGCCCCC TTCCACCT CTGGGGTGTC chr8:131694243-131694323 36 5.74e-04 ttaagtttct ggccccct tgtggttggg chr2:65215934-65216014 10 5.74e-04 ACCGCCCCG GGCCCCCT CACCGCGCCC chr6:37528355-37528435 32 5.74e-04 tgcactccct ggccccct tgtggttgga chr3:167458924-167459004 36 5.74e-04 ACTGCTTTGA GGCCCCCT TCTGGTTCTG chr9:96075009-96075089 36 5.74e-04 gaatggtctt ggccccct tgtggagagt chr17:75370600-75370680 47 6.29e-04 ACTTGGGCAG AGCCCTCT GGTGGGCCGG chr1:17746474-17746554 3 6.29e-04 TT TTCCATCT GCCAGGCGCT chr21:36007762-36007842 43 6.29e-04 aacatggtgg agccctct tgtgggggag chr12:56099748-56099828 61 6.69e-04 GAGGCAGTCA GGCCCTCT GGGAAAGGCC chr7:100202417-100202497 58 6.95e-04 GTCCAGCCAG TTCCTCCT CCCGCTTCCA chr6:26087686-26087766 10 6.95e-04 CCGGCGCTT CTCCTCCT GATGCTTTTG chr19:6218637-6218717 2 6.95e-04 C CTCCTCCT GCAGCTGTCC chr8:144130371-144130451 63 8.12e-04 cagcagcggg ggccacct cagtcgggcc chr17:73611635-73611715 69 8.12e-04 AGGGCCCTGG GGCCACCT GGTG chr4:74124280-74124360 57 8.23e-04 gggctccctt ctccttct gcagccgtcg chr17:37202316-37202396 49 8.23e-04 GGGGGCTCCG TTCCTTCT GGGCCAAAGC chr11:61504748-61504828 52 8.39e-04 TGCTGAGGTG AGCCATCT GGGGCTTCAG chr1:6142512-6142592 58 8.74e-04 ggggaccaca gtccctct GGTGCCAAAG chr10:112316932-11231701 45 8.74e-04 gacgtcttag ggccatct tagaatttgg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:183959795-183959875 0.00013 35_[+1]_37 chr1:33358623-33358703 0.00013 49_[+1]_23 chr9:37411425-37411505 0.00013 33_[+1]_39 chr19:33793459-33793539 0.00013 26_[+1]_46 chr2:42411661-42411741 0.00013 27_[+1]_45 chr5:179636202-179636282 0.00013 16_[+1]_56 chr4:170696073-170696153 0.00013 12_[+1]_60 chr7:100289420-100289500 0.00013 27_[+1]_45 chr17:79071324-79071404 0.00013 36_[+1]_36 chr20:49204808-49204888 0.00013 [+1]_72 chr7:127660362-127660442 0.00013 51_[+1]_21 chr11:36766271-36766351 0.00013 33_[+1]_39 chr2:86116251-86116331 0.00013 31_[+1]_41 chr11:44654482-44654562 0.00013 19_[+1]_53 chr2:190627902-190627982 0.00013 27_[+1]_45 chr1:86047048-86047128 0.00013 29_[+1]_43 chr16:30420925-30421005 0.00013 38_[+1]_34 chr12:133137901-13313798 0.00013 33_[+1]_39 chr10:121362148-12136222 0.00013 41_[+1]_31 chr1:162597658-162597738 0.00013 29_[+1]_43 chr19:18977470-18977550 0.00013 24_[+1]_48 chr3:126108267-126108347 0.00013 52_[+1]_20 chr11:19139032-19139112 0.00013 43_[+1]_29 chr7:98030614-98030694 0.00013 26_[+1]_46 chr1:205554110-205554190 0.00013 28_[+1]_44 chr7:134923074-134923154 0.00013 43_[+1]_29 chr17:33416456-33416536 0.00013 22_[+1]_50 chr1:110602842-110602922 0.00013 36_[+1]_36 chrX:53106835-53106915 0.00013 29_[+1]_43 chr7:131231528-131231608 0.00013 19_[+1]_53 chr1:181999181-181999261 0.00013 37_[+1]_35 chr22:42353770-42353850 0.00013 48_[+1]_24 chr8:143632630-143632710 0.00013 28_[+1]_44 chr5:982729-982809 0.00013 28_[+1]_44 chr19:41858518-41858598 0.00013 28_[+1]_44 chr7:6677464-6677544 0.00013 39_[+1]_33 chr9:131769174-131769254 0.00013 17_[+1]_55 chr11:47182749-47182829 0.00013 15_[+1]_57 chr16:58232055-58232135 0.00013 40_[+1]_32 chr14:100259569-10025964 0.00013 35_[+1]_37 chr6:151186763-151186843 0.00013 48_[+1]_24 chr16:58034660-58034740 0.00013 20_[+1]_52 chr11:46413583-46413663 0.00013 31_[+1]_41 chr17:36819488-36819568 0.00013 35_[+1]_37 chr17:26839313-26839393 0.00013 37_[+1]_35 chr9:134615526-134615606 0.00013 16_[+1]_56 chr9:126803395-126803475 0.00013 40_[+1]_32 chr17:73236864-73236944 0.00013 9_[+1]_63 chr16:89976842-89976922 0.00013 32_[+1]_40 chr4:3454337-3454417 0.00013 67_[+1]_5 chr19:47232153-47232233 0.00013 25_[+1]_47 chr21:47300478-47300558 0.00013 25_[+1]_47 chr2:24387405-24387485 0.00013 12_[+1]_60 chr11:61250155-61250235 0.00013 17_[+1]_55 chr5:176883491-176883571 0.00013 39_[+1]_33 chr12:51984631-51984711 0.00013 23_[+1]_49 chr19:3429642-3429722 0.00013 32_[+1]_40 chr7:25935122-25935202 0.00013 24_[+1]_48 chr8:72917539-72917619 0.00019 38_[+1]_34 chr19:50184091-50184171 0.00019 36_[+1]_36 chr12:67835717-67835797 0.00019 26_[+1]_46 chr1:150952079-150952159 0.00019 68_[+1]_4 chr19:56821092-56821172 0.00019 9_[+1]_63 chr12:53273412-53273492 0.00019 51_[+1]_21 chr19:41814558-41814638 0.00019 33_[+1]_39 chr10:71168440-71168520 0.00019 42_[+1]_30 chr3:195293812-195293892 0.00019 35_[+1]_37 chr1:40075410-40075490 0.00019 44_[+1]_28 chr12:113612328-11361240 0.00019 34_[+1]_38 chr6:29596541-29596621 0.00019 32_[+1]_40 chr3:128564862-128564942 0.00019 37_[+1]_35 chr4:40553024-40553104 0.00019 18_[+1]_54 chr22:41418305-41418385 0.00019 23_[+1]_49 chr15:74913553-74913633 0.00019 60_[+1]_12 chr18:7567210-7567290 0.00019 26_[+1]_46 chr17:80509849-80509929 0.00031 36_[+1]_36 chr16:3078344-3078424 0.00031 31_[+1]_41 chr6:30690535-30690615 0.00031 38_[+1]_34 chr11:120081772-12008185 0.00031 63_[+1]_9 chr5:149555249-149555329 0.00031 36_[+1]_36 chr11:119612146-11961222 0.00031 21_[+1]_51 chr20:48100834-48100914 0.00031 27_[+1]_45 chr2:17081835-17081915 0.00031 [+1]_72 chr1:208267261-208267341 0.00031 26_[+1]_46 chr15:40799388-40799468 0.00031 37_[+1]_35 chr17:73521073-73521153 0.00031 36_[+1]_36 chr1:156389826-156389906 0.00031 67_[+1]_5 chr16:30969594-30969674 0.00031 24_[+1]_48 chr18:3063112-3063192 0.00031 36_[+1]_36 chr12:121881173-12188125 0.00031 25_[+1]_47 chr19:39209645-39209725 0.00031 31_[+1]_41 chr2:173539564-173539644 0.00031 33_[+1]_39 chr14:74225153-74225233 0.00031 32_[+1]_40 chr22:19741155-19741235 0.00031 31_[+1]_41 chr6:33382552-33382632 0.00031 11_[+1]_61 chr22:23197998-23198078 0.00036 34_[+1]_38 chr19:41312928-41313008 0.00042 29_[+1]_43 chr9:130587982-130588062 0.00042 26_[+1]_46 chr5:125937001-125937081 0.00042 43_[+1]_29 chr1:203024466-203024546 0.00042 34_[+1]_38 chr2:12188823-12188903 0.00048 47_[+1]_25 chr15:40812058-40812138 0.00048 [+1]_72 chr19:42733570-42733650 0.00048 57_[+1]_15 chr8:131694243-131694323 0.00057 35_[+1]_37 chr2:65215934-65216014 0.00057 9_[+1]_63 chr6:37528355-37528435 0.00057 31_[+1]_41 chr3:167458924-167459004 0.00057 35_[+1]_37 chr9:96075009-96075089 0.00057 35_[+1]_37 chr17:75370600-75370680 0.00063 46_[+1]_26 chr1:17746474-17746554 0.00063 2_[+1]_70 chr21:36007762-36007842 0.00063 42_[+1]_30 chr12:56099748-56099828 0.00067 60_[+1]_12 chr7:100202417-100202497 0.00069 57_[+1]_15 chr6:26087686-26087766 0.00069 9_[+1]_63 chr19:6218637-6218717 0.00069 1_[+1]_71 chr8:144130371-144130451 0.00081 62_[+1]_10 chr17:73611635-73611715 0.00081 68_[+1]_4 chr4:74124280-74124360 0.00082 56_[+1]_16 chr17:37202316-37202396 0.00082 48_[+1]_24 chr11:61504748-61504828 0.00084 51_[+1]_21 chr1:6142512-6142592 0.00087 57_[+1]_15 chr10:112316932-11231701 0.00087 44_[+1]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CGCCCCCT width=8 seqs=122 chr3:183959795-183959875 ( 36) TGCCCCCT 1 chr1:33358623-33358703 ( 50) CGCCCCCT 1 chr9:37411425-37411505 ( 34) TGCCCCCT 1 chr19:33793459-33793539 ( 27) CGCCCCCT 1 chr2:42411661-42411741 ( 28) CGCCCCCT 1 chr5:179636202-179636282 ( 17) CGCCCCCT 1 chr4:170696073-170696153 ( 13) CGCCCCCT 1 chr7:100289420-100289500 ( 28) TGCCCCCT 1 chr17:79071324-79071404 ( 37) CGCCCCCT 1 chr20:49204808-49204888 ( 1) TGCCCCCT 1 chr7:127660362-127660442 ( 52) CGCCCCCT 1 chr11:36766271-36766351 ( 34) CGCCCCCT 1 chr2:86116251-86116331 ( 32) CGCCCCCT 1 chr11:44654482-44654562 ( 20) TGCCCCCT 1 chr2:190627902-190627982 ( 28) CGCCCCCT 1 chr1:86047048-86047128 ( 30) TGCCCCCT 1 chr16:30420925-30421005 ( 39) TGCCCCCT 1 chr12:133137901-13313798 ( 34) CGCCCCCT 1 chr10:121362148-12136222 ( 42) TGCCCCCT 1 chr1:162597658-162597738 ( 30) TGCCCCCT 1 chr19:18977470-18977550 ( 25) CGCCCCCT 1 chr3:126108267-126108347 ( 53) TGCCCCCT 1 chr11:19139032-19139112 ( 44) CGCCCCCT 1 chr7:98030614-98030694 ( 27) CGCCCCCT 1 chr1:205554110-205554190 ( 29) CGCCCCCT 1 chr7:134923074-134923154 ( 44) TGCCCCCT 1 chr17:33416456-33416536 ( 23) CGCCCCCT 1 chr1:110602842-110602922 ( 37) CGCCCCCT 1 chrX:53106835-53106915 ( 30) CGCCCCCT 1 chr7:131231528-131231608 ( 20) TGCCCCCT 1 chr1:181999181-181999261 ( 38) CGCCCCCT 1 chr22:42353770-42353850 ( 49) CGCCCCCT 1 chr8:143632630-143632710 ( 29) CGCCCCCT 1 chr5:982729-982809 ( 29) TGCCCCCT 1 chr19:41858518-41858598 ( 29) CGCCCCCT 1 chr7:6677464-6677544 ( 40) CGCCCCCT 1 chr9:131769174-131769254 ( 18) CGCCCCCT 1 chr11:47182749-47182829 ( 16) TGCCCCCT 1 chr16:58232055-58232135 ( 41) CGCCCCCT 1 chr14:100259569-10025964 ( 36) CGCCCCCT 1 chr6:151186763-151186843 ( 49) TGCCCCCT 1 chr16:58034660-58034740 ( 21) CGCCCCCT 1 chr11:46413583-46413663 ( 32) CGCCCCCT 1 chr17:36819488-36819568 ( 36) TGCCCCCT 1 chr17:26839313-26839393 ( 38) TGCCCCCT 1 chr9:134615526-134615606 ( 17) CGCCCCCT 1 chr9:126803395-126803475 ( 41) CGCCCCCT 1 chr17:73236864-73236944 ( 10) CGCCCCCT 1 chr16:89976842-89976922 ( 33) TGCCCCCT 1 chr4:3454337-3454417 ( 68) TGCCCCCT 1 chr19:47232153-47232233 ( 26) CGCCCCCT 1 chr21:47300478-47300558 ( 26) CGCCCCCT 1 chr2:24387405-24387485 ( 13) TGCCCCCT 1 chr11:61250155-61250235 ( 18) CGCCCCCT 1 chr5:176883491-176883571 ( 40) CGCCCCCT 1 chr12:51984631-51984711 ( 24) CGCCCCCT 1 chr19:3429642-3429722 ( 33) TGCCCCCT 1 chr7:25935122-25935202 ( 25) CGCCCCCT 1 chr8:72917539-72917619 ( 39) CGCCCTCT 1 chr19:50184091-50184171 ( 37) CGCCCTCT 1 chr12:67835717-67835797 ( 27) CGCCCTCT 1 chr1:150952079-150952159 ( 69) CGCCCTCT 1 chr19:56821092-56821172 ( 10) CGCCCTCT 1 chr12:53273412-53273492 ( 52) CGCCCTCT 1 chr19:41814558-41814638 ( 34) CGCCCTCT 1 chr10:71168440-71168520 ( 43) CGCCCTCT 1 chr3:195293812-195293892 ( 36) TGCCCTCT 1 chr1:40075410-40075490 ( 45) CGCCCTCT 1 chr12:113612328-11361240 ( 35) TGCCCTCT 1 chr6:29596541-29596621 ( 33) CGCCCTCT 1 chr3:128564862-128564942 ( 38) CGCCCTCT 1 chr4:40553024-40553104 ( 19) TGCCCTCT 1 chr22:41418305-41418385 ( 24) CGCCCTCT 1 chr15:74913553-74913633 ( 61) TGCCCTCT 1 chr18:7567210-7567290 ( 27) CGCCCTCT 1 chr17:80509849-80509929 ( 37) CTCCCCCT 1 chr16:3078344-3078424 ( 32) CGCCACCT 1 chr6:30690535-30690615 ( 39) TGCCACCT 1 chr11:120081772-12008185 ( 64) CGCCACCT 1 chr5:149555249-149555329 ( 37) CTCCCCCT 1 chr11:119612146-11961222 ( 22) CGCCACCT 1 chr20:48100834-48100914 ( 28) CGCCACCT 1 chr2:17081835-17081915 ( 1) CGCCACCT 1 chr1:208267261-208267341 ( 27) CGCCACCT 1 chr15:40799388-40799468 ( 38) CTCCCCCT 1 chr17:73521073-73521153 ( 37) CGCCACCT 1 chr1:156389826-156389906 ( 68) CTCCCCCT 1 chr16:30969594-30969674 ( 25) TGCCACCT 1 chr18:3063112-3063192 ( 37) CTCCCCCT 1 chr12:121881173-12188125 ( 26) CGCCACCT 1 chr19:39209645-39209725 ( 32) CTCCCCCT 1 chr2:173539564-173539644 ( 34) CGCCACCT 1 chr14:74225153-74225233 ( 33) CTCCCCCT 1 chr22:19741155-19741235 ( 32) CTCCCCCT 1 chr6:33382552-33382632 ( 12) CTCCCCCT 1 chr22:23197998-23198078 ( 35) CTCCCTCT 1 chr19:41312928-41313008 ( 30) CGCCTCCT 1 chr9:130587982-130588062 ( 27) CGCCTCCT 1 chr5:125937001-125937081 ( 44) CGCCTCCT 1 chr1:203024466-203024546 ( 35) TGCCTCCT 1 chr2:12188823-12188903 ( 48) AGCCCCCT 1 chr15:40812058-40812138 ( 1) AGCCCCCT 1 chr19:42733570-42733650 ( 58) TTCCACCT 1 chr8:131694243-131694323 ( 36) GGCCCCCT 1 chr2:65215934-65216014 ( 10) GGCCCCCT 1 chr6:37528355-37528435 ( 32) GGCCCCCT 1 chr3:167458924-167459004 ( 36) GGCCCCCT 1 chr9:96075009-96075089 ( 36) GGCCCCCT 1 chr17:75370600-75370680 ( 47) AGCCCTCT 1 chr1:17746474-17746554 ( 3) TTCCATCT 1 chr21:36007762-36007842 ( 43) AGCCCTCT 1 chr12:56099748-56099828 ( 61) GGCCCTCT 1 chr7:100202417-100202497 ( 58) TTCCTCCT 1 chr6:26087686-26087766 ( 10) CTCCTCCT 1 chr19:6218637-6218717 ( 2) CTCCTCCT 1 chr8:144130371-144130451 ( 63) GGCCACCT 1 chr17:73611635-73611715 ( 69) GGCCACCT 1 chr4:74124280-74124360 ( 57) CTCCTTCT 1 chr17:37202316-37202396 ( 49) TTCCTTCT 1 chr11:61504748-61504828 ( 52) AGCCATCT 1 chr1:6142512-6142592 ( 58) GTCCCTCT 1 chr10:112316932-11231701 ( 45) GGCCATCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.93543 E= 6.7e-069 -190 83 -209 78 -1357 -1357 129 -5 -1357 153 -1357 -1357 -1357 153 -1357 -1357 -13 119 -1357 -105 -1357 117 -1357 53 -1357 153 -1357 -1357 -1357 -1357 -1357 271 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 122 E= 6.7e-069 0.040984 0.614754 0.081967 0.262295 0.000000 0.000000 0.852459 0.147541 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.139344 0.786885 0.000000 0.073770 0.000000 0.778689 0.000000 0.221311 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CGCCCCCT MEME-1 regular expression -------------------------------------------------------------------------------- [CT]GCCC[CT]CT -------------------------------------------------------------------------------- Time 5.06 secs. ******************************************************************************** ******************************************************************************** MOTIF AGGGGGCG MEME-2 width = 8 sites = 107 llr = 767 E-value = 8.5e-039 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 Description -------------------------------------------------------------------------------- Simplified A a:2:::12 pos.-specific C ::::::9: probability G :a89aa:7 matrix T :::1:::1 bits 2.7 * 2.4 * 2.2 * 1.9 * Relative 1.6 * Entropy 1.4 ** ** (10.3 bits) 1.1 ** **** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel AGGGGGCG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:2053965-2054045 15 9.40e-05 CCTCTCCACC AGGGGGCG GCAAGGCCAG chr16:81069303-81069383 50 9.40e-05 cgcggccggc agggggcg ccgcggccgc chr17:36886363-36886443 35 9.40e-05 CCCGCCCGGC AGGGGGCG CCGGGACCGA chr3:123166937-123167017 60 9.40e-05 cgccgccCGC AGGGGGCG CCCGGGTgct chr16:87883708-87883788 49 9.40e-05 TACAGCCAGC AGGGGGCG CCAGGAGCAA chr6:37673331-37673411 43 9.40e-05 CATAAACTAC AGGGGGCG CCATTCACAT chr19:38716994-38717074 38 9.40e-05 CTCATCCACC AGGGGGCG CCCCAGCCGA chr7:1680144-1680224 42 9.40e-05 GTGTCTCGGA AGGGGGCG CTGTGGCACG chr1:12061785-12061865 39 9.40e-05 CAATCCTCCT AGGGGGCG CTCTCGCAGA chr16:1388274-1388354 55 9.40e-05 GCCGCCCTGC AGGGGGCG CAGGGACTTA chr7:100202417-100202497 41 9.40e-05 AGGGGCCAGA AGGGGGCG TCCAGCCAGT chr5:176037179-176037259 33 9.40e-05 CGGAACCGCG AGGGGGCG GTGACCGCGG chr17:79977942-79978022 43 9.40e-05 CAGCTCCACT AGGGGGCG CCAGGGCCCT chr16:30996405-30996485 36 9.40e-05 AGCGGCCGCC AGGGGGCG CCTTGGGGCA chr9:134269322-134269402 40 9.40e-05 GAGGCGCGGC AGGGGGCG CTGCGCGGGC chr6:36807772-36807852 41 9.40e-05 GGAACGCCAG Agggggcg cccgcagggg chr19:46367431-46367511 41 9.40e-05 GCGATCCCGC AGGGGGCG CCCCAGTCCG chr11:64397612-64397692 27 9.40e-05 CCTCCCCCAT AGGGGGCG CATTCGCACC chr7:131231528-131231608 67 9.40e-05 ATAGGAAGGC AGGGGGCG CCATCT chr19:18272238-18272318 50 9.40e-05 cgccgccgcc AGGGGGCG CTCCCGACGG chr1:11397717-11397797 37 9.40e-05 TCAGGCCCCC AGGGGGCG CACCTCCCCC chr16:21611268-21611348 39 9.40e-05 CGGCTCCGCG AGGGGGCG GCCCGGCCCT chr6:33179584-33179664 36 9.40e-05 GAGGGCCTGG AGGGGGCG CCTCTGACAC chr19:35633944-35634024 69 9.40e-05 GGGCCCCAGC AGGGGGCG CCCC chr20:56101733-56101813 43 9.40e-05 GAGGGCCTGC AGGGGGCG CTGGGGAACC chr1:27659417-27659497 34 9.40e-05 CACAACAGCC AGGGGGCG CCCTGACCTC chr11:66131513-66131593 37 9.40e-05 TTGGCCCAGT AGGGGGCG CCAGCAAGGC chr18:12328047-12328127 39 9.40e-05 AAGGTCCAGC AGGGGGCG CCTGTTCTCC chr22:23197998-23198078 52 9.40e-05 TGAGGCCACC AGGGGGCG GGGGTGGCAC chr7:129795018-129795098 42 9.40e-05 CAGCGCCGCC AGGGGGCG TCCTCTTGCA chr5:33589007-33589087 38 9.40e-05 CCAACccact agggggcg tgctgcagac chr5:76941438-76941518 55 9.40e-05 cccggccccc agggggcg cagcgcccgc chr9:133576581-133576661 42 9.40e-05 CTCTTCCTCC AGGGGGCG CTGCAGCTCA chr9:34675208-34675288 10 9.40e-05 AGGGCCTGC AGGGGGCG TCCAGTGCCT chr2:20442136-20442216 50 9.40e-05 ccgggccgcc agggggcg cTCTCGGCGG chr1:46998626-46998706 42 9.40e-05 CTGGTCCGCT Agggggcg gcgcgcgccc chr12:54785165-54785245 41 9.40e-05 GGGCTCCGCG AGGGGGCG TCCTGGCCCC chr12:53605709-53605789 36 9.40e-05 TGACTCCCCT AGGGGGCG CCCAGCACAG chr10:88109395-88109475 18 1.77e-04 GCAGACCTAC AGGGGGCA GGACAGGGCT chr3:38688224-38688304 39 1.77e-04 ATGGTGCGCC AGGGGGCA GCACACCTCA chr3:9904401-9904481 29 1.77e-04 CGGGACCCGC AGAGGGCG CCTGTCCGTG chr1:17746474-17746554 48 1.77e-04 CGCGGCCAGC AGAGGGCG CCCGCGCCAC chr15:59430542-59430622 63 1.77e-04 GGGCCCCAAC AGGGGGCA GCAGCACCGA chr1:207108958-207109038 61 1.77e-04 GTCCACCAGC AGGGGGCA GCGGCCATTC chr7:127660362-127660442 16 1.77e-04 tgcaaactcc agggggca ctaatcactt chr10:106113459-10611353 29 1.77e-04 TAGCGCCCCT AGAGGGCG TGTCCGTTGC chr1:156594277-156594357 40 1.77e-04 GGGGCCCGAG AGAGGGCG CCAGGCGAGC chr12:50156937-50157017 36 1.77e-04 TGGGACCAGC AGAGGGCG CCAACTTCAG chr7:135389015-135389095 34 1.77e-04 GAGGCCCTGC AGAGGGCG CCATAATGGG chr2:95540090-95540170 58 1.77e-04 ACCGCCCACT AGAGGGCG GCAAACTCCT chr19:49501399-49501479 55 1.77e-04 ggcctcccct agggggca gcacttgatc chr19:42733570-42733650 24 1.77e-04 GGAATCCAGT AGGGGGCA TACCCATTGC chr16:88695227-88695307 54 1.77e-04 CCCAGCCCCT AGGGGGCA GGGCAGAGGG chr17:32907798-32907878 41 1.77e-04 CAGATCCTGC AGGGGGCA CCAGCTGGGG chr3:12917580-12917660 45 1.77e-04 CGGGACCCGC AGAGGGCG CCCGTCCGCG chr10:112316932-11231701 27 1.77e-04 gtgcaccaca agggggca gacgtcttag chr17:73236864-73236944 59 1.77e-04 TCCAGCCAGG AGAGGGCG TTGCTTGTGC chr3:129062899-129062979 32 1.77e-04 CGGGACCTGC AGAGGGCG CCCGCCCGTG chr11:102139574-10213965 56 1.77e-04 CGGCTGCTGC AGAGGGCG TTGCCCGACT chr19:6218637-6218717 37 1.77e-04 CTCAGCCACC AGGGGGCA GTAAAAGCCA chr1:156389826-156389906 41 1.95e-04 GGGGACCACC AGAGGGCA CCACAATGAG chr12:133345121-13334520 34 1.95e-04 GAGGCCCAGC AGAGGGCA GCACCTGGAT chr19:39964918-39964998 42 2.36e-04 AGCTACCACC AGGTGGCG CCAAGCCCAG chr22:42062784-42062864 46 2.36e-04 TCCATCCGCC AGGTGGCG ACACAGCCGG chr5:54523149-54523229 45 2.36e-04 TGAGCGCCAG AGGTGGCG CCTTCAGCCC chr1:156326859-156326939 37 2.36e-04 CTCCGCCGCT AGGTGGCG GGCTGGCTCA chr6:144263398-144263478 31 2.36e-04 GTGGACCACC AGGTGGCG TCGCACATCC chr21:44271040-44271120 37 2.36e-04 CCCATCCAGC AGGTGGCG CAGCCTCCCC chr17:73996655-73996735 47 2.78e-04 GGGGGCCAGG AGGGGGAG CTGCAACCCA chrX:16901121-16901201 35 2.78e-04 CAGTCCCCAC AGGGGGAG CCACAGGTTC chr14:23525497-23525577 37 2.78e-04 CCTCCCCACA AGGGGGAG CCCCACTCTC chr17:37202316-37202396 38 3.55e-04 CGGATCCACC AGGGGGCT CCGTTCCTTC chr1:150952079-150952159 39 3.55e-04 AGGGGCCACT AGGGGGCT CGAGACTCTC chr15:40812058-40812138 57 3.55e-04 CCAAGCCGCA AGGTGGCA GTGCTGTTCG chr3:129047664-129047744 43 3.55e-04 CCTGTCCCAC AGGTGGCA GCACTCGCCG chr11:4203457-4203537 49 3.55e-04 CAGAGCCACA AGGTGGCA CCCAAGCACC chr8:11365876-11365956 43 3.55e-04 TTCCTCCGCT AGGGGGCT CTGGCACAAG chr22:19741155-19741235 59 3.55e-04 ACAGAAGGGA AGGGGGCT AGCAGGGACT chr17:75370600-75370680 66 3.92e-04 GTGGGCCGGG AGGGGGAA AGGCTGT chr16:28502797-28502877 51 3.92e-04 ATGGTCCAAC AGAGGGAG CCGGGGCTCC chr22:42353770-42353850 23 4.33e-04 CCGGGCCTGC AGGAGGCG CACAAGTGGC chr8:74207225-74207305 42 4.33e-04 ggcTGCCGGC AGGAGGCG CCGAGCCGGG chr7:6677464-6677544 24 4.33e-04 TCTCTGCAGG AGGAGGCG GCTCCGGACG chr19:14542865-14542945 20 5.01e-04 CACCGCCGCC AGGGAGCG CTCCCTGCCG chr10:82295740-82295820 43 5.01e-04 TGCGGCCGCC AGGGAGCG CCCCAGGCCT chr6:42228803-42228883 41 5.01e-04 TTTCTCCACC AGAGGGCT CCTCAGCGCC chrX:48828895-48828975 43 5.01e-04 CTCCTCCGCT AGAGGGCT CTGCTTCTGG chr7:25935122-25935202 55 5.09e-04 CGGCGCTTTC AGAGGGAA GGGGAGCCAG chr7:2594900-2594980 56 5.69e-04 GAGAGTCCAG AAGGGGCG CCAGAGCAGG chr7:100289420-100289500 45 5.69e-04 TGCCGGAGAC AAGGGGCG AGGACACGCT chr8:21946566-21946646 72 5.69e-04 CCGGGCCGGG AAggggcg g chr19:1837735-1837815 57 5.69e-04 ACCGCCCAGC AGGTGGAG CCACACGGCA chr4:140973401-140973481 43 5.69e-04 CGGATCCACA AGGTGGAG CCACTGCGGG chr11:119612146-11961222 48 6.41e-04 TGGGCCGCGG AGAGAGCG TCCCTGTCCT chr9:504432-504512 59 6.41e-04 CTCTGGGCGG AGGGAGCA GCCGGGGCTT chr5:982729-982809 17 7.53e-04 TGTTGTGGGG AGGGGCCG GGGATGCCCC chr9:126803395-126803475 25 7.53e-04 GAGCCGCCGC AGGGGCCG GACGAGGGCG chr6:33382552-33382632 37 8.24e-04 CCCCTACTGG AGATGGAG CACTCACCAG chr2:65215934-65216014 42 9.48e-04 CCCTGGCGGG AGAGGCCG GCGAGCTCTG chr22:41418305-41418385 4 9.48e-04 CCC AGAGGCCG CACCTGGGCC chr3:46759398-46759478 59 9.48e-04 GGCGCCCCCC AGGGGCCA CCCGCCACGG chr5:179636202-179636282 46 1.06e-03 GGCAGCGCGG AGCGGGCG GGGCGCGGGG chr14:100259569-10025964 53 1.06e-03 tcgcgggcgg agcgggcg cTGGGCTCGC chr16:84992792-84992872 58 1.14e-03 CCCGTCCTGC AGGGGGTG CAGTGTGTTT chr6:151186763-151186843 73 1.34e-03 CCCTGGGACG AGGAGGAA chr11:61504748-61504828 34 1.49e-03 ACTCCCCGCC AGGGGGCC TGCTGAGGTG chr1:22965917-22965997 43 1.72e-03 GCCTGTAAAA TGGGGGCG CTATTGCTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:2053965-2054045 9.4e-05 14_[+2]_58 chr16:81069303-81069383 9.4e-05 49_[+2]_23 chr17:36886363-36886443 9.4e-05 34_[+2]_38 chr3:123166937-123167017 9.4e-05 59_[+2]_13 chr16:87883708-87883788 9.4e-05 48_[+2]_24 chr6:37673331-37673411 9.4e-05 42_[+2]_30 chr19:38716994-38717074 9.4e-05 37_[+2]_35 chr7:1680144-1680224 9.4e-05 41_[+2]_31 chr1:12061785-12061865 9.4e-05 38_[+2]_34 chr16:1388274-1388354 9.4e-05 54_[+2]_18 chr7:100202417-100202497 9.4e-05 40_[+2]_32 chr5:176037179-176037259 9.4e-05 32_[+2]_40 chr17:79977942-79978022 9.4e-05 42_[+2]_30 chr16:30996405-30996485 9.4e-05 35_[+2]_37 chr9:134269322-134269402 9.4e-05 39_[+2]_33 chr6:36807772-36807852 9.4e-05 40_[+2]_32 chr19:46367431-46367511 9.4e-05 40_[+2]_32 chr11:64397612-64397692 9.4e-05 26_[+2]_46 chr7:131231528-131231608 9.4e-05 66_[+2]_6 chr19:18272238-18272318 9.4e-05 49_[+2]_23 chr1:11397717-11397797 9.4e-05 36_[+2]_36 chr16:21611268-21611348 9.4e-05 38_[+2]_34 chr6:33179584-33179664 9.4e-05 35_[+2]_37 chr19:35633944-35634024 9.4e-05 68_[+2]_4 chr20:56101733-56101813 9.4e-05 42_[+2]_30 chr1:27659417-27659497 9.4e-05 33_[+2]_39 chr11:66131513-66131593 9.4e-05 36_[+2]_36 chr18:12328047-12328127 9.4e-05 38_[+2]_34 chr22:23197998-23198078 9.4e-05 51_[+2]_21 chr7:129795018-129795098 9.4e-05 41_[+2]_31 chr5:33589007-33589087 9.4e-05 37_[+2]_35 chr5:76941438-76941518 9.4e-05 54_[+2]_18 chr9:133576581-133576661 9.4e-05 41_[+2]_31 chr9:34675208-34675288 9.4e-05 9_[+2]_63 chr2:20442136-20442216 9.4e-05 49_[+2]_23 chr1:46998626-46998706 9.4e-05 41_[+2]_31 chr12:54785165-54785245 9.4e-05 40_[+2]_32 chr12:53605709-53605789 9.4e-05 35_[+2]_37 chr10:88109395-88109475 0.00018 17_[+2]_55 chr3:38688224-38688304 0.00018 38_[+2]_34 chr3:9904401-9904481 0.00018 28_[+2]_44 chr1:17746474-17746554 0.00018 47_[+2]_25 chr15:59430542-59430622 0.00018 62_[+2]_10 chr1:207108958-207109038 0.00018 60_[+2]_12 chr7:127660362-127660442 0.00018 15_[+2]_57 chr10:106113459-10611353 0.00018 28_[+2]_44 chr1:156594277-156594357 0.00018 39_[+2]_33 chr12:50156937-50157017 0.00018 35_[+2]_37 chr7:135389015-135389095 0.00018 33_[+2]_39 chr2:95540090-95540170 0.00018 57_[+2]_15 chr19:49501399-49501479 0.00018 54_[+2]_18 chr19:42733570-42733650 0.00018 23_[+2]_49 chr16:88695227-88695307 0.00018 53_[+2]_19 chr17:32907798-32907878 0.00018 40_[+2]_32 chr3:12917580-12917660 0.00018 44_[+2]_28 chr10:112316932-11231701 0.00018 26_[+2]_46 chr17:73236864-73236944 0.00018 58_[+2]_14 chr3:129062899-129062979 0.00018 31_[+2]_41 chr11:102139574-10213965 0.00018 55_[+2]_17 chr19:6218637-6218717 0.00018 36_[+2]_36 chr1:156389826-156389906 0.00019 40_[+2]_32 chr12:133345121-13334520 0.00019 33_[+2]_39 chr19:39964918-39964998 0.00024 41_[+2]_31 chr22:42062784-42062864 0.00024 45_[+2]_27 chr5:54523149-54523229 0.00024 44_[+2]_28 chr1:156326859-156326939 0.00024 36_[+2]_36 chr6:144263398-144263478 0.00024 30_[+2]_42 chr21:44271040-44271120 0.00024 36_[+2]_36 chr17:73996655-73996735 0.00028 46_[+2]_26 chrX:16901121-16901201 0.00028 34_[+2]_38 chr14:23525497-23525577 0.00028 36_[+2]_36 chr17:37202316-37202396 0.00036 37_[+2]_35 chr1:150952079-150952159 0.00036 38_[+2]_34 chr15:40812058-40812138 0.00036 56_[+2]_16 chr3:129047664-129047744 0.00036 42_[+2]_30 chr11:4203457-4203537 0.00036 48_[+2]_24 chr8:11365876-11365956 0.00036 42_[+2]_30 chr22:19741155-19741235 0.00036 58_[+2]_14 chr17:75370600-75370680 0.00039 65_[+2]_7 chr16:28502797-28502877 0.00039 50_[+2]_22 chr22:42353770-42353850 0.00043 22_[+2]_50 chr8:74207225-74207305 0.00043 41_[+2]_31 chr7:6677464-6677544 0.00043 23_[+2]_49 chr19:14542865-14542945 0.0005 19_[+2]_53 chr10:82295740-82295820 0.0005 42_[+2]_30 chr6:42228803-42228883 0.0005 40_[+2]_32 chrX:48828895-48828975 0.0005 42_[+2]_30 chr7:25935122-25935202 0.00051 54_[+2]_18 chr7:2594900-2594980 0.00057 55_[+2]_17 chr7:100289420-100289500 0.00057 44_[+2]_28 chr8:21946566-21946646 0.00057 71_[+2]_1 chr19:1837735-1837815 0.00057 56_[+2]_16 chr4:140973401-140973481 0.00057 42_[+2]_30 chr11:119612146-11961222 0.00064 47_[+2]_25 chr9:504432-504512 0.00064 58_[+2]_14 chr5:982729-982809 0.00075 16_[+2]_56 chr9:126803395-126803475 0.00075 24_[+2]_48 chr6:33382552-33382632 0.00082 36_[+2]_36 chr2:65215934-65216014 0.00095 41_[+2]_31 chr22:41418305-41418385 0.00095 3_[+2]_69 chr3:46759398-46759478 0.00095 58_[+2]_14 chr5:179636202-179636282 0.0011 45_[+2]_27 chr14:100259569-10025964 0.0011 52_[+2]_20 chr16:84992792-84992872 0.0011 57_[+2]_15 chr6:151186763-151186843 0.0013 72_[+2] chr11:61504748-61504828 0.0015 33_[+2]_39 chr1:22965917-22965997 0.0017 42_[+2]_30 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGGGGGCG width=8 seqs=107 chr16:2053965-2054045 ( 15) AGGGGGCG 1 chr16:81069303-81069383 ( 50) AGGGGGCG 1 chr17:36886363-36886443 ( 35) AGGGGGCG 1 chr3:123166937-123167017 ( 60) AGGGGGCG 1 chr16:87883708-87883788 ( 49) AGGGGGCG 1 chr6:37673331-37673411 ( 43) AGGGGGCG 1 chr19:38716994-38717074 ( 38) AGGGGGCG 1 chr7:1680144-1680224 ( 42) AGGGGGCG 1 chr1:12061785-12061865 ( 39) AGGGGGCG 1 chr16:1388274-1388354 ( 55) AGGGGGCG 1 chr7:100202417-100202497 ( 41) AGGGGGCG 1 chr5:176037179-176037259 ( 33) AGGGGGCG 1 chr17:79977942-79978022 ( 43) AGGGGGCG 1 chr16:30996405-30996485 ( 36) AGGGGGCG 1 chr9:134269322-134269402 ( 40) AGGGGGCG 1 chr6:36807772-36807852 ( 41) AGGGGGCG 1 chr19:46367431-46367511 ( 41) AGGGGGCG 1 chr11:64397612-64397692 ( 27) AGGGGGCG 1 chr7:131231528-131231608 ( 67) AGGGGGCG 1 chr19:18272238-18272318 ( 50) AGGGGGCG 1 chr1:11397717-11397797 ( 37) AGGGGGCG 1 chr16:21611268-21611348 ( 39) AGGGGGCG 1 chr6:33179584-33179664 ( 36) AGGGGGCG 1 chr19:35633944-35634024 ( 69) AGGGGGCG 1 chr20:56101733-56101813 ( 43) AGGGGGCG 1 chr1:27659417-27659497 ( 34) AGGGGGCG 1 chr11:66131513-66131593 ( 37) AGGGGGCG 1 chr18:12328047-12328127 ( 39) AGGGGGCG 1 chr22:23197998-23198078 ( 52) AGGGGGCG 1 chr7:129795018-129795098 ( 42) AGGGGGCG 1 chr5:33589007-33589087 ( 38) AGGGGGCG 1 chr5:76941438-76941518 ( 55) AGGGGGCG 1 chr9:133576581-133576661 ( 42) AGGGGGCG 1 chr9:34675208-34675288 ( 10) AGGGGGCG 1 chr2:20442136-20442216 ( 50) AGGGGGCG 1 chr1:46998626-46998706 ( 42) AGGGGGCG 1 chr12:54785165-54785245 ( 41) AGGGGGCG 1 chr12:53605709-53605789 ( 36) AGGGGGCG 1 chr10:88109395-88109475 ( 18) AGGGGGCA 1 chr3:38688224-38688304 ( 39) AGGGGGCA 1 chr3:9904401-9904481 ( 29) AGAGGGCG 1 chr1:17746474-17746554 ( 48) AGAGGGCG 1 chr15:59430542-59430622 ( 63) AGGGGGCA 1 chr1:207108958-207109038 ( 61) AGGGGGCA 1 chr7:127660362-127660442 ( 16) AGGGGGCA 1 chr10:106113459-10611353 ( 29) AGAGGGCG 1 chr1:156594277-156594357 ( 40) AGAGGGCG 1 chr12:50156937-50157017 ( 36) AGAGGGCG 1 chr7:135389015-135389095 ( 34) AGAGGGCG 1 chr2:95540090-95540170 ( 58) AGAGGGCG 1 chr19:49501399-49501479 ( 55) AGGGGGCA 1 chr19:42733570-42733650 ( 24) AGGGGGCA 1 chr16:88695227-88695307 ( 54) AGGGGGCA 1 chr17:32907798-32907878 ( 41) AGGGGGCA 1 chr3:12917580-12917660 ( 45) AGAGGGCG 1 chr10:112316932-11231701 ( 27) AGGGGGCA 1 chr17:73236864-73236944 ( 59) AGAGGGCG 1 chr3:129062899-129062979 ( 32) AGAGGGCG 1 chr11:102139574-10213965 ( 56) AGAGGGCG 1 chr19:6218637-6218717 ( 37) AGGGGGCA 1 chr1:156389826-156389906 ( 41) AGAGGGCA 1 chr12:133345121-13334520 ( 34) AGAGGGCA 1 chr19:39964918-39964998 ( 42) AGGTGGCG 1 chr22:42062784-42062864 ( 46) AGGTGGCG 1 chr5:54523149-54523229 ( 45) AGGTGGCG 1 chr1:156326859-156326939 ( 37) AGGTGGCG 1 chr6:144263398-144263478 ( 31) AGGTGGCG 1 chr21:44271040-44271120 ( 37) AGGTGGCG 1 chr17:73996655-73996735 ( 47) AGGGGGAG 1 chrX:16901121-16901201 ( 35) AGGGGGAG 1 chr14:23525497-23525577 ( 37) AGGGGGAG 1 chr17:37202316-37202396 ( 38) AGGGGGCT 1 chr1:150952079-150952159 ( 39) AGGGGGCT 1 chr15:40812058-40812138 ( 57) AGGTGGCA 1 chr3:129047664-129047744 ( 43) AGGTGGCA 1 chr11:4203457-4203537 ( 49) AGGTGGCA 1 chr8:11365876-11365956 ( 43) AGGGGGCT 1 chr22:19741155-19741235 ( 59) AGGGGGCT 1 chr17:75370600-75370680 ( 66) AGGGGGAA 1 chr16:28502797-28502877 ( 51) AGAGGGAG 1 chr22:42353770-42353850 ( 23) AGGAGGCG 1 chr8:74207225-74207305 ( 42) AGGAGGCG 1 chr7:6677464-6677544 ( 24) AGGAGGCG 1 chr19:14542865-14542945 ( 20) AGGGAGCG 1 chr10:82295740-82295820 ( 43) AGGGAGCG 1 chr6:42228803-42228883 ( 41) AGAGGGCT 1 chrX:48828895-48828975 ( 43) AGAGGGCT 1 chr7:25935122-25935202 ( 55) AGAGGGAA 1 chr7:2594900-2594980 ( 56) AAGGGGCG 1 chr7:100289420-100289500 ( 45) AAGGGGCG 1 chr8:21946566-21946646 ( 72) AAGGGGCG 1 chr19:1837735-1837815 ( 57) AGGTGGAG 1 chr4:140973401-140973481 ( 43) AGGTGGAG 1 chr11:119612146-11961222 ( 48) AGAGAGCG 1 chr9:504432-504512 ( 59) AGGGAGCA 1 chr5:982729-982809 ( 17) AGGGGCCG 1 chr9:126803395-126803475 ( 25) AGGGGCCG 1 chr6:33382552-33382632 ( 37) AGATGGAG 1 chr2:65215934-65216014 ( 42) AGAGGCCG 1 chr22:41418305-41418385 ( 4) AGAGGCCG 1 chr3:46759398-46759478 ( 59) AGGGGCCA 1 chr5:179636202-179636282 ( 46) AGCGGGCG 1 chr14:100259569-10025964 ( 53) AGCGGGCG 1 chr16:84992792-84992872 ( 58) AGGGGGTG 1 chr6:151186763-151186843 ( 73) AGGAGGAA 1 chr11:61504748-61504828 ( 34) AGGGGGCC 1 chr1:22965917-22965997 ( 43) TGGGGGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.19392 E= 8.5e-039 270 -1339 -1339 -403 -245 -1339 148 -1339 36 -421 117 -1339 -203 -1339 129 -45 -203 -1339 147 -1339 -1339 -289 145 -1339 -71 137 -1339 -403 36 -521 108 -145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 107 E= 8.5e-039 0.990654 0.000000 0.000000 0.009346 0.028037 0.000000 0.971963 0.000000 0.196262 0.018692 0.785047 0.000000 0.037383 0.000000 0.850467 0.112150 0.037383 0.000000 0.962617 0.000000 0.000000 0.046729 0.953271 0.000000 0.093458 0.897196 0.000000 0.009346 0.196262 0.009346 0.738318 0.056075 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGGGGGCG MEME-2 regular expression -------------------------------------------------------------------------------- AGGGGGCG -------------------------------------------------------------------------------- Time 8.62 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTCTGAW MEME-3 width = 8 sites = 13 llr = 127 E-value = 3.1e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1:::::75 pos.-specific C :3:a:3:: probability G ::2::7:: matrix T 978:a:35 bits 2.7 * 2.4 * * 2.2 * * 1.9 * * * * Relative 1.6 * *** ** Entropy 1.4 ***** ** (14.1 bits) 1.1 ***** ** 0.8 ***** ** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTTCTGAT consensus C CTA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:26839313-26839393 27 3.09e-06 AGATCACTGC TTTCTGAA CACTGCCCCC chr2:190627902-190627982 62 6.17e-06 AACGGAAGTG TTTCTCAT CGGACAGTGT chr7:150753479-150753559 63 6.17e-06 gaaacagggt tttctcat tCTCTAACAC chr19:39209645-39209725 58 6.17e-06 GCCACTGTGC TTTCTGTT CTCGGCAGCC chr7:127660362-127660442 39 9.25e-06 cactttgcca tttctgta aatggcgccc chr12:53605709-53605789 11 9.25e-06 CTCCCTAACC TTTCTCAA CTGCCCCTGA chr6:30690535-30690615 71 1.43e-05 GAATGACAAG TCTCTGAT CC chr5:982729-982809 54 1.43e-05 TGGGATGGTG TCTCTGAT GCAGAGATGT chr15:74913553-74913633 50 2.78e-05 TGGCTCTGTT TCTCTGTT TGGTGCCCTC chr17:79071324-79071404 73 3.98e-05 TTAAGAGCCG ATTCTGAA chr1:6142512-6142592 21 4.34e-05 cactgatcac ttgctgaa ctccccgtgg chr1:55267236-55267316 19 4.34e-05 gaaccccagt ttgctgaa ggccgggccc chr9:133576581-133576661 29 4.99e-05 GGTGCAGCTG TCTCTCTT CCTCCAGGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:26839313-26839393 3.1e-06 26_[+3]_46 chr2:190627902-190627982 6.2e-06 61_[+3]_11 chr7:150753479-150753559 6.2e-06 62_[+3]_10 chr19:39209645-39209725 6.2e-06 57_[+3]_15 chr7:127660362-127660442 9.2e-06 38_[+3]_34 chr12:53605709-53605789 9.2e-06 10_[+3]_62 chr6:30690535-30690615 1.4e-05 70_[+3]_2 chr5:982729-982809 1.4e-05 53_[+3]_19 chr15:74913553-74913633 2.8e-05 49_[+3]_23 chr17:79071324-79071404 4e-05 72_[+3] chr1:6142512-6142592 4.3e-05 20_[+3]_52 chr1:55267236-55267316 4.3e-05 18_[+3]_54 chr9:133576581-133576661 5e-05 28_[+3]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTCTGAW width=8 seqs=13 chr17:26839313-26839393 ( 27) TTTCTGAA 1 chr2:190627902-190627982 ( 62) TTTCTCAT 1 chr7:150753479-150753559 ( 63) TTTCTCAT 1 chr19:39209645-39209725 ( 58) TTTCTGTT 1 chr7:127660362-127660442 ( 39) TTTCTGTA 1 chr12:53605709-53605789 ( 11) TTTCTCAA 1 chr6:30690535-30690615 ( 71) TCTCTGAT 1 chr5:982729-982809 ( 54) TCTCTGAT 1 chr15:74913553-74913633 ( 50) TCTCTGTT 1 chr17:79071324-79071404 ( 73) ATTCTGAA 1 chr1:6142512-6142592 ( 21) TTGCTGAA 1 chr1:55267236-55267316 ( 19) TTGCTGAA 1 chr9:133576581-133576661 ( 29) TCTCTCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.985 E= 3.1e+003 -99 -1035 -1035 259 -1035 -17 -1035 218 -1035 -1035 -118 247 -1035 153 -1035 -1035 -1035 -1035 -1035 271 -1035 -17 99 -1035 218 -1035 -1035 101 159 -1035 -1035 182 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 13 E= 3.1e+003 0.076923 0.000000 0.000000 0.923077 0.000000 0.307692 0.000000 0.692308 0.000000 0.000000 0.153846 0.846154 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.307692 0.692308 0.000000 0.692308 0.000000 0.000000 0.307692 0.461538 0.000000 0.000000 0.538462 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTCTGAW MEME-3 regular expression -------------------------------------------------------------------------------- T[TC]TCT[GC][AT][TA] -------------------------------------------------------------------------------- Time 11.99 secs. ******************************************************************************** ******************************************************************************** MOTIF ATATAWTT MEME-4 width = 8 sites = 4 llr = 50 E-value = 4.6e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A a383a5:: pos.-specific C ::3::::: probability G :::::::: matrix T :8:8:5aa bits 2.7 * * ** 2.4 * * ** 2.2 * * ** 1.9 ** ** ** Relative 1.6 ******** Entropy 1.4 ******** (17.9 bits) 1.1 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATATAATT consensus ACA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:40553024-40553104 37 6.01e-07 TGTGGTTCTG ATATATTT CCTGAGCACA chr17:80509849-80509929 72 1.80e-06 GTGAGGCACC ATAAAATT A chr8:131694243-131694323 1 1.80e-06 . aaatattt tccggcacat chr19:49501399-49501479 70 3.16e-06 gcagcacttg atctaatt cag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:40553024-40553104 6e-07 36_[+4]_36 chr17:80509849-80509929 1.8e-06 71_[+4]_1 chr8:131694243-131694323 1.8e-06 [+4]_72 chr19:49501399-49501479 3.2e-06 69_[+4]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATATAWTT width=8 seqs=4 chr4:40553024-40553104 ( 37) ATATATTT 1 chr17:80509849-80509929 ( 72) ATAAAATT 1 chr8:131694243-131694323 ( 1) AAATATTT 1 chr19:49501399-49501479 ( 70) ATCTAATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.8924 E= 4.6e+003 271 -865 -865 -865 71 -865 -865 229 229 -47 -865 -865 71 -865 -865 229 271 -865 -865 -865 171 -865 -865 171 -865 -865 -865 271 -865 -865 -865 271 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 4 E= 4.6e+003 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.000000 0.750000 0.750000 0.250000 0.000000 0.000000 0.250000 0.000000 0.000000 0.750000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATAWTT MEME-4 regular expression -------------------------------------------------------------------------------- A[TA][AC][TA]A[AT]TT -------------------------------------------------------------------------------- Time 15.34 secs. ******************************************************************************** ******************************************************************************** MOTIF TTKTTTGT MEME-5 width = 8 sites = 5 llr = 60 E-value = 1.9e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :2:::::: pos.-specific C ::::::2: probability G ::6:::8: matrix T a84aaa:a bits 2.7 * *** * 2.4 * *** * 2.2 * *** * 1.9 ** *** * Relative 1.6 ** *** * Entropy 1.4 ** *** * (17.4 bits) 1.1 ****** * 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTGTTTGT consensus AT C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:42411661-42411741 71 6.83e-07 TCTTGCTTAG TTTTTTGT GA chr15:59430542-59430622 8 2.24e-06 CGACTGG TTGTTTGT CTCCTGACCC chrX:16901121-16901201 57 2.24e-06 AGGTTCCAGC TTGTTTGT TGCCAGGTGC chr3:58449549-58449629 8 3.60e-06 AGGTGAC TATTTTGT TGCCCAGGCT chr1:12061785-12061865 7 6.70e-06 GCCAAG TTGTTTCT GGACTAATGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:42411661-42411741 6.8e-07 70_[+5]_2 chr15:59430542-59430622 2.2e-06 7_[+5]_65 chrX:16901121-16901201 2.2e-06 56_[+5]_16 chr3:58449549-58449629 3.6e-06 7_[+5]_65 chr1:12061785-12061865 6.7e-06 6_[+5]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTKTTTGT width=8 seqs=5 chr2:42411661-42411741 ( 71) TTTTTTGT 1 chr15:59430542-59430622 ( 8) TTGTTTGT 1 chrX:16901121-16901201 ( 57) TTGTTTGT 1 chr3:58449549-58449629 ( 8) TATTTTGT 1 chr1:12061785-12061865 ( 7) TTGTTTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.7769 E= 1.9e+004 -897 -897 -897 271 39 -897 -897 239 -897 -897 78 139 -897 -897 -897 271 -897 -897 -897 271 -897 -897 -897 271 -897 -79 120 -897 -897 -897 -897 271 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 5 E= 1.9e+004 0.000000 0.000000 0.000000 1.000000 0.200000 0.000000 0.000000 0.800000 0.000000 0.000000 0.600000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTKTTTGT MEME-5 regular expression -------------------------------------------------------------------------------- T[TA][GT]TTT[GC]T -------------------------------------------------------------------------------- Time 18.65 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:130686575-130686655 4.14e-01 80 chr12:53605709-53605789 6.41e-04 10_[+3(9.25e-06)]_17_[+2(9.40e-05)]_\ 37 chr12:54785165-54785245 1.57e-01 40_[+2(9.40e-05)]_32 chr7:25935122-25935202 8.10e-03 80 chr6:33382552-33382632 1.25e-01 80 chr19:3429642-3429722 1.93e-01 80 chr1:46998626-46998706 3.22e-01 41_[+2(9.40e-05)]_31 chr18:7567210-7567290 3.25e-01 80 chr4:140973401-140973481 2.72e-01 80 chr12:51984631-51984711 1.37e-01 80 chr5:176883491-176883571 1.17e-01 80 chr17:53045584-53045664 5.17e-01 80 chr19:6218637-6218717 9.24e-02 80 chr11:61250155-61250235 2.31e-01 80 chr22:19741155-19741235 9.01e-02 80 chr3:46759398-46759478 2.76e-01 80 chr16:28502797-28502877 1.73e-01 80 chr2:20442136-20442216 2.89e-01 49_[+2(9.40e-05)]_23 chr17:73611635-73611715 4.23e-02 80 chr9:96075009-96075089 3.63e-02 80 chr14:74225153-74225233 3.03e-01 80 chr2:173539564-173539644 3.53e-01 80 chr2:24387405-24387485 2.70e-01 80 chr9:34675208-34675288 1.37e-02 9_[+2(9.40e-05)]_63 chr21:43267697-43267777 7.47e-01 80 chr15:74913553-74913633 1.92e-04 49_[+3(2.78e-05)]_23 chr21:47300478-47300558 3.50e-02 80 chr19:39209645-39209725 7.00e-04 57_[+3(6.17e-06)]_15 chr9:133576581-133576661 3.11e-03 28_[+3(4.99e-05)]_5_[+2(9.40e-05)]_\ 31 chr19:47232153-47232233 3.57e-01 80 chr4:3454337-3454417 1.56e-01 80 chr22:41418305-41418385 1.17e-01 80 chr1:55267236-55267316 2.92e-02 18_[+3(4.34e-05)]_54 chr16:89976842-89976922 1.57e-01 80 chr11:102139574-10213965 4.52e-01 80 chr3:129062899-129062979 5.24e-01 80 chrX:48828895-48828975 6.31e-02 80 chr17:73236864-73236944 8.01e-04 66_[+5(9.02e-05)]_6 chr5:76941438-76941518 3.40e-01 54_[+2(9.40e-05)]_18 chr9:126803395-126803475 1.10e-01 80 chr5:33589007-33589087 1.63e-01 37_[+2(9.40e-05)]_35 chr9:134615526-134615606 4.70e-01 80 chr11:61519927-61520007 8.20e-01 80 chr17:26839313-26839393 5.04e-06 26_[+3(3.09e-06)]_46 chr7:129795018-129795098 8.78e-02 41_[+2(9.40e-05)]_31 chr12:121881173-12188125 1.62e-01 80 chr17:36819488-36819568 1.85e-01 80 chr11:46413583-46413663 1.19e-01 80 chr8:144130371-144130451 4.90e-02 24_[+3(8.69e-05)]_48 chr16:58034660-58034740 4.49e-01 80 chr18:3063112-3063192 3.17e-02 80 chr6:151186763-151186843 1.71e-01 80 chr22:23197998-23198078 3.21e-02 51_[+2(9.40e-05)]_21 chr12:53441134-53441214 8.26e-01 80 chr15:80527309-80527389 2.61e-01 80 chr16:30969594-30969674 1.25e-01 80 chr5:14872039-14872119 9.05e-01 80 chr6:32053714-32053794 2.22e-01 80 chr1:203024466-203024546 1.27e-01 80 chr7:150753479-150753559 2.32e-03 62_[+3(6.17e-06)]_10 chr21:47745290-47745370 4.12e-01 80 chr14:100259569-10025964 1.52e-01 80 chr18:12328047-12328127 1.28e-01 38_[+2(9.40e-05)]_34 chr11:66131513-66131593 2.03e-01 36_[+2(9.40e-05)]_36 chr6:34158054-34158134 3.77e-01 80 chr16:58232055-58232135 2.54e-01 80 chr1:27659417-27659497 1.42e-01 33_[+2(9.40e-05)]_39 chr11:47182749-47182829 2.22e-01 80 chr9:131769174-131769254 9.02e-02 80 chr7:6677464-6677544 7.29e-03 80 chr5:125937001-125937081 3.55e-01 80 chr19:41858518-41858598 2.77e-01 80 chr4:40553024-40553104 7.99e-07 36_[+4(6.01e-07)]_36 chr3:167458924-167459004 8.93e-02 80 chr5:982729-982809 3.81e-05 53_[+3(1.43e-05)]_19 chr19:1837735-1837815 4.45e-01 80 chr21:38120182-38120262 4.08e-01 80 chr20:56101733-56101813 3.23e-01 42_[+2(9.40e-05)]_30 chr8:74207225-74207305 7.31e-01 80 chr19:18561862-18561942 4.30e-01 80 chr12:133345121-13334520 2.78e-01 80 chr19:35633944-35634024 2.33e-02 68_[+2(9.40e-05)]_4 chr6:33179584-33179664 2.04e-01 35_[+2(9.40e-05)]_37 chr10:112316932-11231701 7.70e-03 80 chr6:37528355-37528435 1.46e-01 80 chr16:21611268-21611348 4.36e-02 38_[+2(9.40e-05)]_34 chr1:11397717-11397797 9.61e-03 36_[+2(9.40e-05)]_36 chr8:143632630-143632710 1.20e-01 80 chr21:44271040-44271120 6.25e-02 80 chr9:130587982-130588062 1.34e-01 80 chr11:109963836-10996391 9.93e-01 80 chr22:42353770-42353850 1.70e-02 80 chr3:128564862-128564942 3.13e-01 80 chr6:144263398-144263478 4.09e-02 80 chr3:12917580-12917660 4.03e-01 80 chr8:11365876-11365956 3.77e-02 80 chr6:29596541-29596621 2.23e-01 80 chr12:57943759-57943839 8.52e-01 80 chr16:2867170-2867250 2.35e-01 34_[+2(9.40e-05)]_27_[+2(9.40e-05)]_\ 3 chr5:153570299-153570379 9.31e-01 80 chr4:3075347-3075427 9.36e-01 80 chr19:18272238-18272318 3.06e-01 49_[+2(9.40e-05)]_23 chr7:50198891-50198971 9.05e-01 80 chr17:32907798-32907878 1.39e-01 80 chr16:88695227-88695307 2.40e-01 80 chr11:4203457-4203537 2.21e-01 80 chr1:6142512-6142592 7.17e-03 20_[+3(4.34e-05)]_52 chr1:181999181-181999261 9.12e-02 80 chr19:42733570-42733650 4.82e-03 80 chr7:131231528-131231608 3.14e-02 66_[+2(9.40e-05)]_6 chrX:53106835-53106915 1.58e-01 80 chr1:110602842-110602922 1.65e-01 80 chr19:51611068-51611148 8.88e-01 80 chr17:33416456-33416536 4.67e-01 80 chr7:134923074-134923154 1.10e-01 80 chr9:129276616-129276696 7.68e-01 80 chr11:64397612-64397692 5.84e-02 26_[+2(9.40e-05)]_46 chr1:22965917-22965997 2.54e-02 80 chr3:129047664-129047744 2.32e-01 80 chr15:41222866-41222946 4.87e-02 80 chr12:113612328-11361240 1.56e-01 80 chr1:156389826-156389906 2.06e-02 80 chr12:48166879-48166959 9.46e-01 80 chr17:73521073-73521153 5.33e-01 80 chr11:61504748-61504828 5.64e-02 80 chr14:23525497-23525577 2.72e-02 80 chr1:40075410-40075490 2.77e-01 80 chr6:42228803-42228883 3.09e-03 27_[+5(9.47e-05)]_45 chr19:46367431-46367511 8.83e-02 40_[+2(9.40e-05)]_32 chr3:195293812-195293892 9.19e-03 80 chr1:27693049-27693129 9.95e-01 80 chr20:633996-634076 6.80e-01 80 chr15:40799388-40799468 7.35e-02 80 chr15:40812058-40812138 9.51e-03 80 chr1:205554110-205554190 2.50e-02 80 chr14:23322796-23322876 5.77e-01 80 chr1:208267261-208267341 1.19e-02 80 chr9:504432-504512 4.11e-01 80 chr10:71168440-71168520 1.09e-01 80 chr2:17081835-17081915 7.17e-02 80 chrX:16901121-16901201 6.09e-04 56_[+5(2.24e-06)]_16 chr6:36807772-36807852 3.63e-01 40_[+2(9.40e-05)]_32 chr6:26087686-26087766 9.51e-02 80 chr19:41814558-41814638 1.34e-01 80 chr16:18995186-18995266 4.58e-01 80 chr20:48100834-48100914 2.89e-01 80 chr19:49501399-49501479 5.38e-04 69_[+4(3.16e-06)]_3 chr7:151329531-151329611 9.58e-01 80 chr7:98030614-98030694 3.20e-01 80 chr11:119612146-11961222 1.17e-01 80 chr5:149555249-149555329 1.05e-01 80 chr11:19139032-19139112 3.02e-01 80 chr3:126108267-126108347 1.92e-01 80 chr19:18977470-18977550 8.71e-02 80 chr1:162597658-162597738 1.50e-03 80 chr9:134269322-134269402 3.95e-01 39_[+2(9.40e-05)]_33 chr10:121362148-12136222 6.50e-02 80 chr12:133137901-13313798 6.70e-02 80 chr2:65215934-65216014 2.09e-01 80 chr16:30420925-30421005 1.75e-02 80 chr2:95540090-95540170 7.63e-02 80 chr1:86047048-86047128 2.15e-01 80 chr4:155548050-155548130 3.12e-01 80 chr11:120081772-12008185 4.46e-01 80 chr1:114472638-114472718 3.29e-01 80 chr17:73996655-73996735 2.20e-01 80 chr10:82295740-82295820 4.70e-01 80 chr8:21946566-21946646 4.46e-01 80 chr2:190627902-190627982 2.91e-05 61_[+3(6.17e-06)]_11 chr11:44654482-44654562 1.44e-01 80 chr7:135389015-135389095 8.87e-02 80 chr16:30996405-30996485 1.87e-01 35_[+2(9.40e-05)]_37 chr17:79977942-79978022 1.67e-01 42_[+2(9.40e-05)]_30 chr5:176037179-176037259 2.20e-01 32_[+2(9.40e-05)]_40 chr12:50156937-50157017 1.46e-01 80 chr7:100202417-100202497 1.33e-02 40_[+2(9.40e-05)]_32 chr16:1388274-1388354 7.54e-03 54_[+2(9.40e-05)]_18 chr1:156326859-156326939 4.59e-01 80 chr2:17329730-17329810 1.49e-01 80 chr2:86116251-86116331 4.75e-01 80 chr9:136223794-136223874 2.72e-01 80 chr5:61064712-61064792 2.45e-01 80 chr1:156594277-156594357 1.60e-01 80 chr21:36007762-36007842 1.39e-01 80 chr1:12061785-12061865 9.49e-06 6_[+5(6.70e-06)]_24_[+2(9.40e-05)]_\ 34 chr6:30690535-30690615 1.10e-03 70_[+3(1.43e-05)]_2 chr12:53273412-53273492 2.10e-01 80 chr10:106113459-10611353 3.22e-02 80 chr19:56821092-56821172 2.57e-01 80 chr5:54523149-54523229 1.57e-01 80 chr1:150952079-150952159 9.48e-03 80 chr11:36766271-36766351 4.09e-02 80 chr1:1284753-1284833 9.48e-01 80 chr6:25153434-25153514 8.60e-01 80 chr17:1552238-1552318 5.14e-01 80 chr16:3078344-3078424 4.14e-01 80 chr9:127557338-127557418 2.07e-01 80 chr11:75236970-75237050 9.98e-01 80 chr19:14542865-14542945 1.13e-01 80 chr7:127660362-127660442 9.74e-07 38_[+3(9.25e-06)]_34 chr22:42062784-42062864 1.62e-01 80 chr12:67835717-67835797 1.57e-02 80 chr20:49204808-49204888 5.66e-02 80 chr19:41312928-41313008 3.72e-01 80 chr8:131694243-131694323 6.71e-05 [+4(1.80e-06)]_72 chr16:30662746-30662826 6.69e-01 80 chr1:207108958-207109038 2.01e-01 80 chr15:59430542-59430622 4.52e-04 7_[+5(2.24e-06)]_65 chr7:1680144-1680224 5.02e-02 41_[+2(9.40e-05)]_31 chr17:79071324-79071404 5.47e-04 72_[+3(3.98e-05)] chr2:202969133-202969213 6.70e-01 80 chr7:100289420-100289500 4.66e-03 80 chr17:80509849-80509929 7.16e-04 71_[+4(1.80e-06)]_1 chr17:37202316-37202396 2.16e-02 80 chr4:170696073-170696153 4.05e-01 80 chr5:179636202-179636282 1.51e-01 80 chr19:38716994-38717074 2.74e-02 37_[+2(9.40e-05)]_35 chr4:74124280-74124360 3.66e-01 80 chr16:12354575-12354655 1.93e-01 80 chr19:50184091-50184171 8.81e-02 80 chr6:37673331-37673411 2.10e-02 42_[+2(9.40e-05)]_30 chr19:39964918-39964998 3.94e-01 80 chr3:135969152-135969232 3.29e-01 80 chr2:12188823-12188903 1.82e-01 80 chr16:87883708-87883788 2.94e-02 48_[+2(9.40e-05)]_24 chr19:8570634-8570714 7.59e-01 80 chr3:123166937-123167017 4.10e-01 59_[+2(9.40e-05)]_13 chr8:72917539-72917619 1.50e-02 80 chr17:36886363-36886443 2.56e-01 34_[+2(9.40e-05)]_38 chr1:17746474-17746554 2.61e-02 80 chr1:1307568-1307648 8.19e-01 80 chr12:56099748-56099828 4.56e-01 80 chr16:84992792-84992872 2.06e-01 80 chr22:23152602-23152682 3.69e-01 80 chr2:42411661-42411741 2.79e-05 70_[+5(6.83e-07)]_2 chr3:58449549-58449629 1.20e-04 7_[+5(3.60e-06)]_65 chr16:81069303-81069383 8.54e-02 49_[+2(9.40e-05)]_23 chr1:249120862-249120942 2.05e-01 80 chr7:2594900-2594980 1.04e-01 80 chr19:33793459-33793539 1.52e-01 80 chr3:9904401-9904481 4.54e-01 80 chr17:75370600-75370680 1.22e-01 80 chr9:37411425-37411505 1.55e-02 80 chr3:38688224-38688304 2.24e-03 80 chr3:184063599-184063679 9.83e-02 80 chr1:33358623-33358703 4.77e-01 80 chr3:183959795-183959875 4.96e-02 80 chr1:166134256-166134336 1.43e-01 80 chr16:2053965-2054045 2.38e-01 14_[+2(9.40e-05)]_58 chr10:88109395-88109475 2.25e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n07.farnam.hpc.yale.internal ********************************************************************************