******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/CTCF.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr15:39110031-39110111 1.0000 80 chr12:130516273-13051635 1.0000 80 chr18:42792850-42792930 1.0000 80 chr3:184521201-184521281 1.0000 80 chr16:8729361-8729441 1.0000 80 chr14:69378463-69378543 1.0000 80 chr5:43627267-43627347 1.0000 80 chrX:132926623-132926703 1.0000 80 chr13:40517068-40517148 1.0000 80 chr3:51753297-51753377 1.0000 80 chr9:34664432-34664512 1.0000 80 chrX:9963952-9964032 1.0000 80 chr9:97890039-97890119 1.0000 80 chr8:81152965-81153045 1.0000 80 chr4:146478960-146479040 1.0000 80 chr1:8035473-8035553 1.0000 80 chr17:78623986-78624066 1.0000 80 chr13:100568896-10056897 1.0000 80 chr20:11993049-11993129 1.0000 80 chr4:16918514-16918594 1.0000 80 chr9:131626010-131626090 1.0000 80 chr6:148899459-148899539 1.0000 80 chr14:106501592-10650167 1.0000 80 chr8:29493641-29493721 1.0000 80 chr1:120217563-120217643 1.0000 80 chr1:24711815-24711895 1.0000 80 chr2:223555444-223555524 1.0000 80 chr19:13200130-13200210 1.0000 80 chr18:11519223-11519303 1.0000 80 chr6:109235596-109235676 1.0000 80 chr13:30046637-30046717 1.0000 80 chr10:98135199-98135279 1.0000 80 chr15:70805239-70805319 1.0000 80 chr16:57625458-57625538 1.0000 80 chr2:48772546-48772626 1.0000 80 chr17:49399920-49400000 1.0000 80 chr19:42924322-42924402 1.0000 80 chr12:53937384-53937464 1.0000 80 chr10:134036726-13403680 1.0000 80 chr8:27283841-27283921 1.0000 80 chr7:133538698-133538778 1.0000 80 chr1:200885453-200885533 1.0000 80 chr21:47016766-47016846 1.0000 80 chr3:31608674-31608754 1.0000 80 chr12:107798947-10779902 1.0000 80 chr9:90788454-90788534 1.0000 80 chr20:25275230-25275310 1.0000 80 chr4:140578291-140578371 1.0000 80 chr2:190008023-190008103 1.0000 80 chr17:37392097-37392177 1.0000 80 chr2:210288540-210288620 1.0000 80 chr14:25148278-25148358 1.0000 80 chrX:152805056-152805136 1.0000 80 chr5:176883476-176883556 1.0000 80 chr19:6048107-6048187 1.0000 80 chrX:38487092-38487172 1.0000 80 chr2:238421574-238421654 1.0000 80 chr2:42997845-42997925 1.0000 80 chr3:51672042-51672122 1.0000 80 chr11:131564878-13156495 1.0000 80 chr5:169766040-169766120 1.0000 80 chr20:1484435-1484515 1.0000 80 chr12:111736800-11173688 1.0000 80 chr1:66708489-66708569 1.0000 80 chr2:15044068-15044148 1.0000 80 chr12:119458724-11945880 1.0000 80 chr3:46759418-46759498 1.0000 80 chr5:179190315-179190395 1.0000 80 chr4:148788091-148788171 1.0000 80 chr2:44706698-44706778 1.0000 80 chr11:36768770-36768850 1.0000 80 chr3:164924665-164924745 1.0000 80 chr16:88814445-88814525 1.0000 80 chr17:72350334-72350414 1.0000 80 chrX:40433174-40433254 1.0000 80 chr11:120173893-12017397 1.0000 80 chr4:57826568-57826648 1.0000 80 chr15:79299597-79299677 1.0000 80 chr12:262470-262550 1.0000 80 chr15:45722597-45722677 1.0000 80 chr7:4837849-4837929 1.0000 80 chr12:125391451-12539153 1.0000 80 chr11:107870647-10787072 1.0000 80 chr12:6147417-6147497 1.0000 80 chr5:61064688-61064768 1.0000 80 chr16:84992800-84992880 1.0000 80 chr14:96567052-96567132 1.0000 80 chr12:29470861-29470941 1.0000 80 chr2:78900306-78900386 1.0000 80 chr19:36542300-36542380 1.0000 80 chr10:88109394-88109474 1.0000 80 chr17:75210921-75211001 1.0000 80 chr15:30218175-30218255 1.0000 80 chr11:62092526-62092606 1.0000 80 chr22:43263889-43263969 1.0000 80 chr11:111299925-11130000 1.0000 80 chr1:201192142-201192222 1.0000 80 chr11:6272496-6272576 1.0000 80 chr12:49947439-49947519 1.0000 80 chrX:152665688-152665768 1.0000 80 chr12:54595246-54595326 1.0000 80 chr19:50982508-50982588 1.0000 80 chr7:4035016-4035096 1.0000 80 chr9:36008921-36009001 1.0000 80 chr10:118976264-11897634 1.0000 80 chr3:127174539-127174619 1.0000 80 chr4:48965229-48965309 1.0000 80 chr14:106986566-10698664 1.0000 80 chr8:127888986-127889066 1.0000 80 chr4:83660612-83660692 1.0000 80 chr2:72364754-72364834 1.0000 80 chr15:90442030-90442110 1.0000 80 chr16:28519529-28519609 1.0000 80 chr4:82297052-82297132 1.0000 80 chr17:46755908-46755988 1.0000 80 chr3:139072926-139073006 1.0000 80 chr22:41973035-41973115 1.0000 80 chr8:86133000-86133080 1.0000 80 chrX:73770296-73770376 1.0000 80 chr11:67415740-67415820 1.0000 80 chr19:56821091-56821171 1.0000 80 chr11:60253536-60253616 1.0000 80 chr16:48387637-48387717 1.0000 80 chr15:74913561-74913641 1.0000 80 chr17:19266320-19266400 1.0000 80 chr17:4443661-4443741 1.0000 80 chr22:32774812-32774892 1.0000 80 chr9:138304567-138304647 1.0000 80 chr19:4804062-4804142 1.0000 80 chr2:17081818-17081898 1.0000 80 chr15:64973765-64973845 1.0000 80 chr14:69255770-69255850 1.0000 80 chr18:9792718-9792798 1.0000 80 chr16:23446892-23446972 1.0000 80 chr9:95397115-95397195 1.0000 80 chr9:98980590-98980670 1.0000 80 chr1:204593292-204593372 1.0000 80 chr13:28107383-28107463 1.0000 80 chr1:19233687-19233767 1.0000 80 chr20:36569914-36569994 1.0000 80 chr19:15695603-15695683 1.0000 80 chr10:7729364-7729444 1.0000 80 chr17:42160979-42161059 1.0000 80 chr7:131229805-131229885 1.0000 80 chr9:136608253-136608333 1.0000 80 chr17:61045960-61046040 1.0000 80 chr20:33894911-33894991 1.0000 80 chr2:135208563-135208643 1.0000 80 chrX:108729106-108729186 1.0000 80 chr9:134731618-134731698 1.0000 80 chrX:12789729-12789809 1.0000 80 chr1:155176788-155176868 1.0000 80 chr8:20233854-20233934 1.0000 80 chr12:104026493-10402657 1.0000 80 chr6:152085569-152085649 1.0000 80 chr14:90866028-90866108 1.0000 80 chr1:86965841-86965921 1.0000 80 chr3:73143344-73143424 1.0000 80 chr22:47826629-47826709 1.0000 80 chr6:29040038-29040118 1.0000 80 chr10:106051314-10605139 1.0000 80 chr9:71199492-71199572 1.0000 80 chr21:43801659-43801739 1.0000 80 chrX:100023870-100023950 1.0000 80 chr13:112051235-11205131 1.0000 80 chr3:52035629-52035709 1.0000 80 chrX:104166964-104167044 1.0000 80 chr16:68544220-68544300 1.0000 80 chr8:41815469-41815549 1.0000 80 chr16:24528455-24528535 1.0000 80 chr1:44760545-44760625 1.0000 80 chr3:52419342-52419422 1.0000 80 chr17:34131874-34131954 1.0000 80 chr12:110348859-11034893 1.0000 80 chr1:54535899-54535979 1.0000 80 chr10:5671965-5672045 1.0000 80 chr8:140353259-140353339 1.0000 80 chr12:119882398-11988247 1.0000 80 chr2:28789768-28789848 1.0000 80 chr11:9142650-9142730 1.0000 80 chr2:11568-11648 1.0000 80 chr15:27262509-27262589 1.0000 80 chr12:31399183-31399263 1.0000 80 chr11:59961243-59961323 1.0000 80 chr7:148224858-148224938 1.0000 80 chr19:50073559-50073639 1.0000 80 chr11:6319969-6320049 1.0000 80 chr7:149015286-149015366 1.0000 80 chr16:48151557-48151637 1.0000 80 chr15:74257204-74257284 1.0000 80 chr16:74743450-74743530 1.0000 80 chr12:14607186-14607266 1.0000 80 chr9:34675208-34675288 1.0000 80 chr8:10786088-10786168 1.0000 80 chr1:7727755-7727835 1.0000 80 chr8:139739784-139739864 1.0000 80 chr15:74420003-74420083 1.0000 80 chr18:60251685-60251765 1.0000 80 chr1:203840321-203840401 1.0000 80 chr20:44221374-44221454 1.0000 80 chr5:149217413-149217493 1.0000 80 chrX:155196687-155196767 1.0000 80 chr16:8223262-8223342 1.0000 80 chr1:181394186-181394266 1.0000 80 chr19:4677266-4677346 1.0000 80 chr13:46700862-46700942 1.0000 80 chr1:224922411-224922491 1.0000 80 chr20:412220-412300 1.0000 80 chr12:54140551-54140631 1.0000 80 chr7:91808336-91808416 1.0000 80 chr3:119540003-119540083 1.0000 80 chr22:37252530-37252610 1.0000 80 chr7:22599625-22599705 1.0000 80 chr16:27190969-27191049 1.0000 80 chr11:76802353-76802433 1.0000 80 chr6:164768661-164768741 1.0000 80 chr2:20155747-20155827 1.0000 80 chr16:11626148-11626228 1.0000 80 chr5:179095545-179095625 1.0000 80 chr19:46580956-46581036 1.0000 80 chr3:48477532-48477612 1.0000 80 chr11:2952116-2952196 1.0000 80 chr6:33600450-33600530 1.0000 80 chrX:138208827-138208907 1.0000 80 chr8:57154649-57154729 1.0000 80 chr14:22568645-22568725 1.0000 80 chr13:20534389-20534469 1.0000 80 chr3:115538779-115538859 1.0000 80 chr1:34098785-34098865 1.0000 80 chr18:45275646-45275726 1.0000 80 chr9:7234291-7234371 1.0000 80 chr18:68101275-68101355 1.0000 80 chr1:118385644-118385724 1.0000 80 chr4:152722881-152722961 1.0000 80 chr20:31683898-31683978 1.0000 80 chr11:5621665-5621745 1.0000 80 chr17:47485492-47485572 1.0000 80 chr3:126108243-126108323 1.0000 80 chr5:145770202-145770282 1.0000 80 chr3:113874397-113874477 1.0000 80 chr14:21560786-21560866 1.0000 80 chr16:28102404-28102484 1.0000 80 chrX:64815426-64815506 1.0000 80 chr12:26587409-26587489 1.0000 80 chrX:153212910-153212990 1.0000 80 chr10:102321895-10232197 1.0000 80 chr15:90514919-90514999 1.0000 80 chr7:101151219-101151299 1.0000 80 chr13:112157646-11215772 1.0000 80 chr14:107147764-10714784 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_CTCF/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/CTCF.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.195 C 0.301 G 0.3 T 0.203 Background letter frequencies (from file dataset with add-one prior applied): A 0.195 C 0.301 G 0.3 T 0.203 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CCTGCWGG MEME-1 width = 8 sites = 250 llr = 1336 E-value = 4.0e-085 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::3115:1 pos.-specific C 7a:26::1 probability G 1::62:a7 matrix T 2:7:14:1 bits 2.4 2.1 1.9 1.7 * * Relative 1.4 * * Entropy 1.2 ** ** (7.7 bits) 0.9 ** ** 0.7 ** ** 0.5 **** *** 0.2 ******** 0.0 -------- Multilevel CCTGCAGG consensus T ACGT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr9:34675208-34675288 5 2.91e-05 AGGG CCTGCAGG GGGCGTCCAG chr2:28789768-28789848 2 2.91e-05 C CCTGCAGG TGGCGCGGGC chr12:110348859-11034893 26 2.91e-05 ACAGGCGGAT CCTGCAGG CCCTCCTCGA chr16:68544220-68544300 29 2.91e-05 CCGGGCGCCC CCTGCAGG TTGTACGGGC chr17:42160979-42161059 41 2.91e-05 TCACTGTCCA CCTGCAGG GCAGGAGAGC chr9:95397115-95397195 19 2.91e-05 CACAGAACGA CCTGCAGG AGCGCTGCTC chr2:17081818-17081898 23 2.91e-05 caatacgcca cctgcagg ctgagatcat chr16:84992800-84992880 45 2.91e-05 CAAGGCCCGT CCTGCAGG GGGTGCAGTG chr15:45722597-45722677 55 2.91e-05 CGCAGAATGT CCTGCAGG GGGCGCCCGG chr2:15044068-15044148 12 2.91e-05 CCGGTTACCA CCTGCAGG GGGCGGCATC chr21:47016766-47016846 12 2.91e-05 CCCGGAGGGC CCTGCAGG TGTCACACCG chr1:200885453-200885533 18 2.91e-05 CCGTGCTTGC CCTGCAGG GACCGCTCCA chr12:130516273-13051635 16 2.91e-05 TCTGGGTCCA CCTGCAGG TCAACTTTGA chr1:203840321-203840401 50 5.95e-05 CTGCTTCAGC CCTGCTGG TGAGAAGATT chr7:148224858-148224938 28 5.95e-05 ttcagtgccg cctgctgg ttcctacttc chr17:34131874-34131954 55 5.95e-05 cagttcagat cctgctgg gcctctctgt chr3:52419342-52419422 70 5.95e-05 GTATGCACCC CCTGCTGG AGG chr1:204593292-204593372 6 5.95e-05 TGCCC CCTGCTGG GCCCCTCAGC chr9:138304567-138304647 13 5.95e-05 GCGCTCGCCC CCTGCTGG ACGCTCGCGG chrX:73770296-73770376 11 5.95e-05 TCGCGCGCCC CCTGCTGG CCACCAGAGA chr4:48965229-48965309 5 5.95e-05 GCCA CCTGCTGG TCATGGTGCA chr17:72350334-72350414 55 5.95e-05 AGGGGCGACA CCTGCTGG CACCCGCGAC chr4:148788091-148788171 10 5.95e-05 ATGCTGCCA CCTGCTGG TCAACTCTTG chr1:66708489-66708569 6 5.95e-05 CCCCA CCTGCTGG GCTTGGAGGC chr14:106501592-10650167 49 5.95e-05 CTGAGTGCCC CCTGCTGG TCTTGAGCAC chr17:78623986-78624066 23 5.95e-05 AGAGGGGACC CCTGCTGG CCAGCCCTGT chr4:146478960-146479040 26 5.95e-05 ACTAGCACCC CCTGCTGG ATTGAGATAC chr16:8729361-8729441 62 5.95e-05 GCCTAGCGCC CCTGCTGG TACCTCTCTC chr20:36569914-36569994 7 7.91e-05 GAAACA TCTGCAGG CTGCATGCAG chr5:169766040-169766120 73 7.91e-05 CAGGGTGACC TCTGCAGG chr10:134036726-13403680 28 7.91e-05 AGCAGAGGGA TCTGCAGG GAAGGCTCTG chr17:47485492-47485572 68 1.07e-04 CCCAGGACTT CCAGCAGG CGGAG chr11:5621665-5621745 59 1.07e-04 GCTAGATCCC CCAGCAGG GCCGCTAGGA chr16:11626148-11626228 20 1.07e-04 GAAGAAGTAA CCAGCAGG GGGCAGTGAG chr3:119540003-119540083 12 1.07e-04 CACTTCAGTG CCAGCAGG AGGCGCATCG chr15:74420003-74420083 38 1.07e-04 CAAGCGGCTT CCAGCAGG GGGCGCGCGC chr22:47826629-47826709 29 1.07e-04 catcacgtgt ccagcagg ggctgcgAAC chr19:15695603-15695683 38 1.07e-04 CCACAGACAG CCAGCAGG GGGCGTCGGA chr22:32774812-32774892 71 1.07e-04 CCCACTGGAG CCAGCAGG AG chr16:48387637-48387717 61 1.07e-04 CCTGTTCCAC CCAGCAGG GGCAACAAGG chr10:118976264-11897634 62 1.07e-04 AAGCTTTGCG CCAGCAGG TGGCGCGTCC chr14:96567052-96567132 11 1.07e-04 TGAGCCAGGA CCAGCAGG GGTCAGTGTG chr20:25275230-25275310 13 1.07e-04 CAGCCGTGTC CCAGCAGG CCAGTAGAGG chr12:53937384-53937464 52 1.07e-04 TGCCTCAAAG CCAGCAGG GGGAAGACCG chr19:42924322-42924402 14 1.07e-04 ggtcacacgg ccagcagg gggcagctcc chr19:13200130-13200210 61 1.07e-04 CCTGTTCCCT CCAGCAGG GCTCCATCTG chr9:131626010-131626090 11 1.07e-04 CCCGAGTCGG CCAGCAGG GGGCGCAAGG chr15:39110031-39110111 49 1.07e-04 CCAGGCTGTT CCAGCAGG GGGCGGCCAC chr7:101151219-101151299 9 1.28e-04 gactgcca tctgctgg aaaactgccg chr15:90514919-90514999 46 1.28e-04 GTGAGCGCTC TCTGCTGG AGGATCCCGG chr18:68101275-68101355 43 1.28e-04 aaggctgcca tctgctgg ccaagagaat chr11:76802353-76802433 25 1.28e-04 TCTGCCACCC TCTGCTGG CCGCCTGTGG chr2:11568-11648 39 1.28e-04 tccagcgccc tctgctgg cgtcggagca chrX:12789729-12789809 39 1.28e-04 cactgcgcCC TCTGCTGG AGGGTCCGAG chr19:50982508-50982588 54 1.28e-04 cactgctccc tctgctgg cagaccccct chr21:43801659-43801739 20 1.86e-04 cctagaggcc ccagctgg tctggcctca chr12:104026493-10402657 17 1.86e-04 cacactgcac cctggagg cagaaagagg chr16:28519529-28519609 73 1.86e-04 CACAGCGGGT CCTGGAGG chr4:83660612-83660692 41 1.86e-04 CCCGCACTGC CCTGGAGG GAGGTCGTGG chr11:120173893-12017397 3 1.86e-04 TA CCTGGAGG GGAAGCTCGC chr19:6048107-6048187 20 1.86e-04 ccaagtgacc cctggagg gcagtgtgag chr2:190008023-190008103 28 1.86e-04 CCTAGGGTCA CCTGGAGG TGGCACTGTT chrX:153212910-153212990 5 2.34e-04 TCTC CCTCCAGG GGGCTCCCGT chr2:20155747-20155827 66 2.34e-04 GACAGCAAAG CCTCCAGG GTGCGCT chr6:164768661-164768741 71 2.34e-04 AACAGCCACC CCTACAGG AT chr11:9142650-9142730 31 2.34e-04 ACTTCTGCCC CCTCCAGG CTCCACTCTG chrX:152665688-152665768 57 2.34e-04 ACGCCGACAG CCTCCAGG GGGCGCTCAC chr10:88109394-88109474 14 2.34e-04 CACAGGCAGA CCTACAGG GGGCAGGACA chr5:43627267-43627347 20 2.34e-04 tgcaacttta cctccagg gggcaatctg chr3:48477532-48477612 70 2.64e-04 GAGAGCGACA CCTGGTGG CCA chr1:224922411-224922491 14 2.64e-04 ATCTGCCCCT CCTGGTGG TTTTGACTCC chr18:60251685-60251765 71 2.64e-04 CGCAATGCCA CCTGGTGG GG chr15:74257204-74257284 53 2.64e-04 TTGCCCGCCC CCTGGTGG TAAATGCCGT chr9:136608253-136608333 5 2.64e-04 CGCC CCTGGTGG CCACACGTGA chr15:30218175-30218255 20 2.64e-04 AGCAGCACCT CCTGGTGG CCAGCAAGCC chr5:176883476-176883556 60 2.64e-04 GAGGACGCCC CCTGGTGG CAAGGAGGTG chr13:30046637-30046717 57 2.64e-04 CATAGCTCCG CCTGGTGG TCACAGGTTT chr14:21560786-21560866 66 3.14e-04 AGCAGCTCCT CCTCCTGG CTGGAGC chr16:48151557-48151637 62 3.14e-04 CTGGGGATGG CCTCCTGG GGGTCACAGG chr18:9792718-9792798 34 3.14e-04 gtttggtgcc cctactgg tgggatctgg chr3:51672042-51672122 70 3.14e-04 TGTGCTGACC CCTCCTGG CCA chr14:69378463-69378543 73 3.14e-04 GGTTAGCGCC CCTCCTGG chrX:138208827-138208907 62 3.33e-04 CTGAAGAAAG TCAGCAGG AGAGTACAAC chr11:59961243-59961323 16 3.53e-04 CTGGTGTCTG CCTGCAGT ACTACAATCT chr1:44760545-44760625 30 4.31e-04 TATGATGCCC TCTGGAGG CTCCGCAGAG chrX:104166964-104167044 51 4.31e-04 tgtacagtgc tcagctgg ttcttgcctg chr1:86965841-86965921 24 4.31e-04 TAAATGTATT CCTGTAGG GGGCGATATA chr10:7729364-7729444 50 4.31e-04 GTCACTTCCA TCAGCTGG AAACAGGCGA chr1:19233687-19233767 13 4.31e-04 CAAAGCCTGC TCAGCTGG CTCCAAGCTG chr2:78900306-78900386 70 4.31e-04 ttagtcgttc cctgcaga tgg chr5:61064688-61064768 18 4.31e-04 ccacccttca cctgtagg tggagtgtca chr11:36768770-36768850 8 4.31e-04 GCTGCCA TCTGGAGG GCAACTGTTG chr7:133538698-133538778 59 4.31e-04 CCATTTGCCC TCTGGAGG CAGTGTTTAA chr2:223555444-223555524 65 4.31e-04 CGGCATCTGG CCTGCAGA GGGTGCAC chr14:107147764-10714784 39 5.60e-04 TTGAGCGCCC CCTGCTGT CCTGAGTGCA chr5:149217413-149217493 52 5.60e-04 TGCCgaatcc gctgcagg atttgttgcg chr12:14607186-14607266 67 5.60e-04 TAGTGCTTCC CCTGCTGT CTGTCT chr8:20233854-20233934 15 5.60e-04 TTGGGGGCCC CCTGCTGT TAGGCATAAG chr20:33894911-33894991 44 5.60e-04 CAATGCTCCC CCTGCTGT CCACAGGGCA chr17:4443661-4443741 52 5.60e-04 GAGTGTGCCC CCTGCTGT AGGCTCTGCT chr11:67415740-67415820 37 5.60e-04 CTAGAGGCGG GCTGCAGG TGGCGCACAG chr8:86133000-86133080 22 5.60e-04 TGCCACTCTC CCAGGAGG AGGCGCTGTG chr15:90442030-90442110 35 5.60e-04 GGGTTTCAGC CCTGCTGT AGTTCCTCAA chr12:125391451-12539153 11 5.60e-04 GCTTGGGAGT GCTGCAGG CTTCATGACT chr15:79299597-79299677 28 5.60e-04 AACCAGTGGC CCTGAAGG CTGCTGTACC chr12:26587409-26587489 60 6.67e-04 ATACATTGGC TCTGGTGG TCAAGAAAGG chr8:57154649-57154729 14 6.67e-04 CATGCTGCTA TCTGGTGG TATACTGCTG chr7:149015286-149015366 68 6.67e-04 TCTTTCTAcc ccaacagg aggag chr11:6319969-6320049 63 6.67e-04 GCATCAGTGG CCACCAGG CTGCAGCTCT chr1:155176788-155176868 15 6.67e-04 TGAGATGCCC CCACCAGG TGGCGCAAAG chr9:134731618-134731698 2 6.67e-04 C TCTGGTGG CCACGGGAAG chr2:135208563-135208643 72 6.67e-04 AAGTATCTGA CCAACAGG G chr22:41973035-41973115 55 6.67e-04 GTGGCCTGGG CCACCAGG TGGAGCATGG chr17:75210921-75211001 24 6.67e-04 CTCTGTGCCC TCTGGTGG CTCATTGTCC chr12:111736800-11173688 19 6.67e-04 GGTGCTGCCA TCTGGTGG GCAGAGTCAG chrX:38487092-38487172 59 6.67e-04 TGCTAAGTCC TCTGGTGG CCACAGTAGG chrX:152805056-152805136 64 6.67e-04 TGCTGTCTGT CCACCAGG TGTCAGTGT chr4:140578291-140578371 15 6.67e-04 CTGAGCTGCC TCTGGTGG TGTTATCCCG chr16:57625458-57625538 20 6.67e-04 CCCATAGCAA CCACCAGG GGTCAGGGCT chrX:9963952-9964032 18 6.67e-04 CGGACTAGTG CCACCAGG GGGCGCGCGG chr3:184521201-184521281 19 6.67e-04 GCCAGCACCA TCTGGTGG CCATGGGCCA chr3:113874397-113874477 29 7.79e-04 aaaggcgccc tctcctgg ctggcaaatc chr12:49947439-49947519 16 7.79e-04 ttactgtcag ccaggtgg cagtcttaac chr3:164924665-164924745 68 7.79e-04 CCAGTTGCCA GCTGCTGG AGAGA chr6:109235596-109235676 70 7.79e-04 CCTGCCACCA CCTGATGG CAG chr14:22568645-22568725 7 9.05e-04 GCACTG CCACCTGG TGTCCCGCTG chr2:72364754-72364834 67 9.05e-04 CCTTGGGGGC CCTAGAGG GCAGGC chr12:262470-262550 8 9.05e-04 GATTCCC CCTAGAGG AGGGTGGGGA chr5:179190315-179190395 58 9.05e-04 AAGCAAACGT CCTGCAGC TGTGGGGCGG chr8:27283841-27283921 5 9.05e-04 CTGT CCACCTGG TGTTAGCTAC chr10:5671965-5672045 34 9.18e-04 taggtggagc tctgcagt gcacagcctg chr4:152722881-152722961 56 1.04e-03 GCACAGTGCC CCTAGTGG CAGAAGAGAA chr16:8223262-8223342 62 1.04e-03 GAGGTCGCCA CCTAGTGG CCAGCAAGAC chr20:44221374-44221454 68 1.04e-03 ccaaatgtcc cctagtgg gcaca chr17:61045960-61046040 20 1.04e-03 CCCCCTACTG TCTGTAGG AAGAGGTGTT chr12:6147417-6147497 6 1.04e-03 CACCA CCTAGTGG CTGCTATAAG chr11:131564878-13156495 8 1.04e-03 ATTGCGA CCTGCTGC CACCAGAGGG chr2:42997845-42997925 7 1.04e-03 ACACAC CCTAGTGG TCACTGGTCA chr7:22599625-22599705 9 1.13e-03 CCTCTTTA CCAGCAGA GGGCAAGTCC chr1:7727755-7727835 70 1.13e-03 GCCTGGCAGC CCAGCAGA GGG chr13:28107383-28107463 15 1.13e-03 GTCCATCGAG CCAGCAGA GGGCGCTGAA chr14:106986566-10698664 30 1.13e-03 CTGATCACTC TCTGAAGG TCCTGAGCGC chr11:6272496-6272576 51 1.13e-03 CCAGGTCTGA CCAGCAGA GAGCAGAAGG chr10:98135199-98135279 59 1.13e-03 cgaacatttc ccagcaga tggcggtctt chr3:51753297-51753377 7 1.13e-03 GGCTCA CCAGCAGA GGGCACTAAG chr7:131229805-131229885 13 1.29e-03 GACTCAAAAA GCAGCAGG GGGCAGAGGC chr9:36008921-36009001 20 1.29e-03 gggtgcactc ccagaagg cagggaccct chr4:57826568-57826648 54 1.29e-03 tttccagttg tcaccagg actgacagca chr16:88814445-88814525 2 1.29e-03 C CCAGAAGG GCGGCACCCA chr18:11519223-11519303 30 1.29e-03 TTCTTGCACC TCTGTTGG CGGATGCGTG chr1:24711815-24711895 62 1.29e-03 AGTGAGGCAG GCAGCAGG AGGCACTGTG chr17:37392097-37392177 7 1.41e-03 AGGACC TCAGGTGG AAAAGACTGA chr13:20534389-20534469 23 1.70e-03 ACGACGGGCT TCTGCAGC TGCTCACGTT chr6:33600450-33600530 73 1.70e-03 TGGAAGGCGC ACTGCAGG chr16:27190969-27191049 34 1.70e-03 cgcgagagcg gcagctgg gacccagtta chr22:37252530-37252610 23 1.70e-03 CATTCAACCT CCTCTAGG TGGCGCTGCG chr19:4677266-4677346 27 1.70e-03 GAAGGAGGGC TCTCGAGG CACTGACGGA chrX:155196687-155196767 63 1.70e-03 CTGACAGCCA CCAGATGG CATGTGAACC chr8:140353259-140353339 1 1.70e-03 . CCTGGTGT TTTTCCCCCA chrX:100023870-100023950 3 1.70e-03 CA CCTGGTGT CTATCTGTAG chr6:29040038-29040118 2 1.70e-03 G GCAGCTGG ACGGCAAGGG chr14:90866028-90866108 43 1.70e-03 tgccgccact gcagctgg tgccaagggg chr16:23446892-23446972 55 1.70e-03 CTGTCCGCCC CCTTCTGG CCAAAATGTA chr19:4804062-4804142 39 1.70e-03 CATTGCGGCA CCTTCTGG GTCCCCACAG chrX:40433174-40433254 68 1.70e-03 aaggccctcg ccagatgg cagca chr2:44706698-44706778 63 1.70e-03 TTGTTCAGAT CCTATAGG TGGCAGCAGT chr12:107798947-10779902 16 1.70e-03 actgctcagc tctagagg gcactagtca chr13:40517068-40517148 49 1.70e-03 GGGGCTGCCC TCTAGAGG CGGAGCTGAG chr16:28102404-28102484 2 1.90e-03 A CCAGCAGC ACCGCAAGGA chr3:115538779-115538859 58 1.90e-03 TCACCTTTGT CCACGAGG TGGCAATAGT chr12:54140551-54140631 4 1.90e-03 CGC CCTCCTGT GGCCGCTGAG chr8:10786088-10786168 66 1.90e-03 CGGAAACGCC GCTCCAGG CAAGTGA chr15:27262509-27262589 59 1.90e-03 TGGCACTCCC CCTACTGT CATTCCATCG chr3:139072926-139073006 13 1.90e-03 AGGTAAAGGC CCTCCTGT GGTCATTCTG chr1:201192142-201192222 38 1.90e-03 TGGCCATTCT GCTCCAGG CCTGCAAATC chr2:238421574-238421654 55 1.90e-03 ACTTGGATTC CCAGCAGC TCCCCCAAGC chr4:16918514-16918594 20 1.90e-03 TGCCTCAGCG CCTCCTGT CTCCCTCTAG chr20:412220-412300 13 2.09e-03 AGAGGGCGCC TCTGCTGC TGAAGGCCTG chr19:56821091-56821171 16 2.09e-03 GGGCGCGCCC TCTAGTGG GAGGTAGGGG chr11:111299925-11130000 24 2.09e-03 GGAGgcgccc cctactga caaagcttaa chr1:120217563-120217643 58 2.09e-03 actactggcc tctagtgg gcagaggcca chr18:42792850-42792930 33 2.09e-03 CCTGGCGCCA TCTAGTGG GGGATCCAAC chr1:181394186-181394266 70 2.30e-03 TATGGTGCCC CCAAGTGG TTG chr12:54595246-54595326 23 2.30e-03 AAAACCTGGT CCTGGAGC CCCCTTGTGG chr11:107870647-10787072 56 2.30e-03 ACCACCCATC CCAGCTGC TGCAAACCCA chr6:148899459-148899539 66 2.30e-03 CCACAGCGCT GCTCCTGG GGACAGT chr8:81152965-81153045 19 2.42e-03 GCAGCGCCGC CCTCCAGC ACTCCGCGCA chr3:52035629-52035709 27 2.59e-03 CCCACCTAGC CCAGGAGT GAGCCGGGAT chr20:1484435-1484515 32 2.59e-03 TCTGGCTGGT GCTGCAGT AAGCCACGGT chr5:145770202-145770282 44 2.84e-03 accaaaactg tctccaga cattgcccca chr20:31683898-31683978 54 2.84e-03 GAAGGATCAT TCTCTAGG GTGGTAACAG chr19:46580956-46581036 36 2.84e-03 TGAGCAGTCT CCTACTGC CATCTAGGGA chr1:54535899-54535979 59 2.84e-03 TAAAGTATTT CCACCAGT AGAGGGTACT chr9:71199492-71199572 2 2.84e-03 T CCTCCTGC CCTCCACAAG chr17:19266320-19266400 62 2.84e-03 GGAGGGAGGC GCTGCAGA GCACGGGCGA chr1:8035473-8035553 52 2.84e-03 GGTGCTGTTG GCTGCAGA AGGGGACATG chr9:7234291-7234371 51 3.18e-03 acttggtttt tctggtga ctagccccat chr13:46700862-46700942 69 3.18e-03 TTCCATTAAG GCTGAAGG CTCT chr16:74743450-74743530 46 3.18e-03 CTGCATGCTG CCACCAGA GGGCAGCAGA chr16:24528455-24528535 54 3.18e-03 TCATGGGAGT CCACTAGG GGGCAGCCAT chr4:82297052-82297132 6 3.18e-03 tctga ccactagg atgtgcaact chr1:34098785-34098865 43 3.48e-03 GGTGAGGGCA GCTGCTGA AGGCCCCGCT chr12:119882398-11988247 48 3.48e-03 cttctcatgg ccacaagg tggcgctgta chr6:152085569-152085649 63 3.48e-03 CCAGTGGGGG GCTGCTGA GCGCAGGGAG chr8:29493641-29493721 48 3.48e-03 CAACAGCTGA CCACAAGG AGCGCCAGTG chr15:64973765-64973845 65 3.80e-03 TGGAGTGCCA CCTTGTGG TTTTTTTA chr12:119458724-11945880 51 3.80e-03 GAAAGTGATT CCTAGAGA CGGTGGGGGG chr13:112051235-11205131 49 4.10e-03 GCGCGTGCTC TCTACAGC GTGTGGATGC chr22:43263889-43263969 10 4.10e-03 AACACTCCC CCTAGTGT CAACTCAGGG chr15:70805239-70805319 6 4.10e-03 TTGGC TCTACAGC ACCCTCTTCC chr1:118385644-118385724 26 4.32e-03 gccgtcttcc ccaacagc tgcattacct chr5:179095545-179095625 7 4.32e-03 cagcca ccaccagc tttctatgac chr3:46759418-46759498 58 4.62e-03 CCGCCACGGC GCTCGTGG TGTCTGACCC chr17:49399920-49400000 8 4.62e-03 GCCACCT TCTGTTGT AGAGTGTTAA chr13:100568896-10056897 65 4.62e-03 TCCCATTTCA CCAGTAGA GGGAAGAG chrX:132926623-132926703 56 4.62e-03 CTGCTTCCAT CCAGTAGA GGGCCAGAAG chr19:36542300-36542380 37 4.93e-03 ctgatctgac tcaggtgt tcacaggctc chr20:11993049-11993129 49 4.93e-03 ccattgggaa cctttagg gggcagtgta chrX:108729106-108729186 25 5.27e-03 TCAGTGCTGC CCTCTAGT AGTCAGCTCC chr12:29470861-29470941 49 5.27e-03 TGATGCTAAG GCAGCTGT CACCACCTAG chr14:25148278-25148358 24 5.27e-03 TGCATTGCGC CCTCTAGT GTCCAGACTG chr2:210288540-210288620 45 5.27e-03 GGCGGCTGCG GCAGAAGG CGAAGCGGTC chr9:90788454-90788534 26 5.27e-03 TGCCCCCTTG TCACAAGG GGGCGGCAGG chr3:31608674-31608754 17 5.27e-03 CTTTGCCTGG CCTTAAGG GGGCACTGTG chr18:45275646-45275726 5 6.56e-03 GACC CCTggcgg ccgccgcgcg chr9:98980590-98980670 27 6.56e-03 CACACTGCCC CCTGGCGG CCATCCCCTG chr7:4837849-4837929 62 6.56e-03 GCCGTAGCGC ACACCAGG GGGCAGCGTG chrX:64815426-64815506 36 7.30e-03 GGTTGCTACA GCAAGTGG TCTAGTTGGG chr8:139739784-139739864 14 7.30e-03 CTGCATGGCC ACTAGAGG GCGAGAAATA chr8:127888986-127889066 6 7.30e-03 TTCCT CCTCTAGC CACATGATGG chr7:91808336-91808416 67 7.59e-03 TGCGAGGACC TCCGCAGG CGCAGC chr3:73143344-73143424 18 7.59e-03 CACACGTGTC GCTGTAGT CTCAGATACG chr8:41815469-41815549 12 8.02e-03 CTGCCTTCCC CCATCTGT CCACTGGAGC chr14:69255770-69255850 64 8.54e-03 GCCCTCTGGC GCTGAAGA GGTAATGTA chr10:106051314-10605139 29 9.04e-03 TCCTCCTTCC CCTTGTGT TCCAGGGCGC chr11:60253536-60253616 62 9.04e-03 CACACTTGCC GCTTGAGG CCACTACTGA chr11:62092526-62092606 53 9.04e-03 GGAAACAGCG CCTCCTTG GGGCCAGAGC chr9:34664432-34664512 40 9.04e-03 TGATTGGGTG ACAGAAGG GGGCGGCAAA chr12:31399183-31399263 55 9.65e-03 gttggcgcca tctcccgg ggtcctcgtc chr17:46755908-46755988 54 9.65e-03 CCTCGGGCGG CCGGCAGG GGTCAGTGTT chr3:127174539-127174619 30 1.11e-02 GCCAGCGCCC CCTGCCGC CCCCAGAGCG chr7:4035016-4035096 52 1.21e-02 TATCTCTTCC TCTACTTG CGTTGTCCCC chr2:48772546-48772626 52 1.34e-02 CCTGCTACAA ACTCCTGC CCCTAGCGGC chr9:97890039-97890119 66 1.40e-02 CCATCTAGCG TCCACTGG TCAGCAC chr10:102321895-10232197 59 1.54e-02 CGGCGAGGTC GCAGTTGC GTTTCTCGCA chr15:74913561-74913641 44 1.54e-02 GCTCTGTTTC TCTGTTTG GTGCCCTCTA chr11:2952116-2952196 43 1.82e-02 TGGGAGTGAG ACACCTGC CTGGGGCCGG chr3:126108243-126108323 15 2.01e-02 CGCCCGGCGC GCTGACGG TGCGGGGCGC chr13:112157646-11215772 71 2.47e-02 CTTCCTCACA TCCACAGA CA chr19:50073559-50073639 45 2.67e-02 GAAACACAAA CCTCTGGG AGCTATGGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:34675208-34675288 2.9e-05 4_[+1]_68 chr2:28789768-28789848 2.9e-05 1_[+1]_71 chr12:110348859-11034893 2.9e-05 25_[+1]_47 chr16:68544220-68544300 2.9e-05 28_[+1]_44 chr17:42160979-42161059 2.9e-05 40_[+1]_32 chr9:95397115-95397195 2.9e-05 18_[+1]_54 chr2:17081818-17081898 2.9e-05 22_[+1]_50 chr16:84992800-84992880 2.9e-05 44_[+1]_28 chr15:45722597-45722677 2.9e-05 54_[+1]_18 chr2:15044068-15044148 2.9e-05 11_[+1]_61 chr21:47016766-47016846 2.9e-05 11_[+1]_61 chr1:200885453-200885533 2.9e-05 17_[+1]_55 chr12:130516273-13051635 2.9e-05 15_[+1]_57 chr1:203840321-203840401 5.9e-05 49_[+1]_23 chr7:148224858-148224938 5.9e-05 27_[+1]_45 chr17:34131874-34131954 5.9e-05 54_[+1]_18 chr3:52419342-52419422 5.9e-05 69_[+1]_3 chr1:204593292-204593372 5.9e-05 5_[+1]_67 chr9:138304567-138304647 5.9e-05 12_[+1]_60 chrX:73770296-73770376 5.9e-05 10_[+1]_62 chr4:48965229-48965309 5.9e-05 4_[+1]_68 chr17:72350334-72350414 5.9e-05 54_[+1]_18 chr4:148788091-148788171 5.9e-05 9_[+1]_63 chr1:66708489-66708569 5.9e-05 5_[+1]_67 chr14:106501592-10650167 5.9e-05 48_[+1]_24 chr17:78623986-78624066 5.9e-05 22_[+1]_50 chr4:146478960-146479040 5.9e-05 25_[+1]_47 chr16:8729361-8729441 5.9e-05 61_[+1]_11 chr20:36569914-36569994 7.9e-05 6_[+1]_66 chr5:169766040-169766120 7.9e-05 72_[+1] chr10:134036726-13403680 7.9e-05 27_[+1]_45 chr17:47485492-47485572 0.00011 67_[+1]_5 chr11:5621665-5621745 0.00011 58_[+1]_14 chr16:11626148-11626228 0.00011 19_[+1]_53 chr3:119540003-119540083 0.00011 11_[+1]_61 chr15:74420003-74420083 0.00011 37_[+1]_35 chr22:47826629-47826709 0.00011 28_[+1]_44 chr19:15695603-15695683 0.00011 37_[+1]_35 chr22:32774812-32774892 0.00011 70_[+1]_2 chr16:48387637-48387717 0.00011 60_[+1]_12 chr10:118976264-11897634 0.00011 61_[+1]_11 chr14:96567052-96567132 0.00011 10_[+1]_62 chr20:25275230-25275310 0.00011 12_[+1]_60 chr12:53937384-53937464 0.00011 51_[+1]_21 chr19:42924322-42924402 0.00011 13_[+1]_59 chr19:13200130-13200210 0.00011 60_[+1]_12 chr9:131626010-131626090 0.00011 10_[+1]_62 chr15:39110031-39110111 0.00011 48_[+1]_24 chr7:101151219-101151299 0.00013 8_[+1]_64 chr15:90514919-90514999 0.00013 45_[+1]_27 chr18:68101275-68101355 0.00013 42_[+1]_30 chr11:76802353-76802433 0.00013 24_[+1]_48 chr2:11568-11648 0.00013 38_[+1]_34 chrX:12789729-12789809 0.00013 38_[+1]_34 chr19:50982508-50982588 0.00013 53_[+1]_19 chr21:43801659-43801739 0.00019 19_[+1]_53 chr12:104026493-10402657 0.00019 16_[+1]_56 chr16:28519529-28519609 0.00019 72_[+1] chr4:83660612-83660692 0.00019 40_[+1]_32 chr11:120173893-12017397 0.00019 2_[+1]_70 chr19:6048107-6048187 0.00019 19_[+1]_53 chr2:190008023-190008103 0.00019 27_[+1]_45 chrX:153212910-153212990 0.00023 4_[+1]_68 chr2:20155747-20155827 0.00023 65_[+1]_7 chr6:164768661-164768741 0.00023 70_[+1]_2 chr11:9142650-9142730 0.00023 30_[+1]_42 chrX:152665688-152665768 0.00023 56_[+1]_16 chr10:88109394-88109474 0.00023 13_[+1]_59 chr5:43627267-43627347 0.00023 19_[+1]_53 chr3:48477532-48477612 0.00026 69_[+1]_3 chr1:224922411-224922491 0.00026 13_[+1]_59 chr18:60251685-60251765 0.00026 70_[+1]_2 chr15:74257204-74257284 0.00026 52_[+1]_20 chr9:136608253-136608333 0.00026 4_[+1]_68 chr15:30218175-30218255 0.00026 19_[+1]_53 chr5:176883476-176883556 0.00026 59_[+1]_13 chr13:30046637-30046717 0.00026 56_[+1]_16 chr14:21560786-21560866 0.00031 65_[+1]_7 chr16:48151557-48151637 0.00031 61_[+1]_11 chr18:9792718-9792798 0.00031 33_[+1]_39 chr3:51672042-51672122 0.00031 69_[+1]_3 chr14:69378463-69378543 0.00031 72_[+1] chrX:138208827-138208907 0.00033 61_[+1]_11 chr11:59961243-59961323 0.00035 15_[+1]_57 chr1:44760545-44760625 0.00043 29_[+1]_43 chrX:104166964-104167044 0.00043 50_[+1]_22 chr1:86965841-86965921 0.00043 23_[+1]_49 chr10:7729364-7729444 0.00043 49_[+1]_23 chr1:19233687-19233767 0.00043 12_[+1]_60 chr2:78900306-78900386 0.00043 69_[+1]_3 chr5:61064688-61064768 0.00043 17_[+1]_55 chr11:36768770-36768850 0.00043 7_[+1]_65 chr7:133538698-133538778 0.00043 58_[+1]_14 chr2:223555444-223555524 0.00043 64_[+1]_8 chr14:107147764-10714784 0.00056 38_[+1]_34 chr5:149217413-149217493 0.00056 51_[+1]_21 chr12:14607186-14607266 0.00056 66_[+1]_6 chr8:20233854-20233934 0.00056 14_[+1]_58 chr20:33894911-33894991 0.00056 43_[+1]_29 chr17:4443661-4443741 0.00056 51_[+1]_21 chr11:67415740-67415820 0.00056 36_[+1]_36 chr8:86133000-86133080 0.00056 21_[+1]_51 chr15:90442030-90442110 0.00056 34_[+1]_38 chr12:125391451-12539153 0.00056 10_[+1]_62 chr15:79299597-79299677 0.00056 27_[+1]_45 chr12:26587409-26587489 0.00067 59_[+1]_13 chr8:57154649-57154729 0.00067 13_[+1]_59 chr7:149015286-149015366 0.00067 67_[+1]_5 chr11:6319969-6320049 0.00067 62_[+1]_10 chr1:155176788-155176868 0.00067 14_[+1]_58 chr9:134731618-134731698 0.00067 1_[+1]_71 chr2:135208563-135208643 0.00067 71_[+1]_1 chr22:41973035-41973115 0.00067 54_[+1]_18 chr17:75210921-75211001 0.00067 23_[+1]_49 chr12:111736800-11173688 0.00067 18_[+1]_54 chrX:38487092-38487172 0.00067 58_[+1]_14 chrX:152805056-152805136 0.00067 63_[+1]_9 chr4:140578291-140578371 0.00067 14_[+1]_58 chr16:57625458-57625538 0.00067 19_[+1]_53 chrX:9963952-9964032 0.00067 17_[+1]_55 chr3:184521201-184521281 0.00067 18_[+1]_54 chr3:113874397-113874477 0.00078 28_[+1]_44 chr12:49947439-49947519 0.00078 15_[+1]_57 chr3:164924665-164924745 0.00078 67_[+1]_5 chr6:109235596-109235676 0.00078 69_[+1]_3 chr14:22568645-22568725 0.0009 6_[+1]_66 chr2:72364754-72364834 0.0009 66_[+1]_6 chr12:262470-262550 0.0009 7_[+1]_65 chr5:179190315-179190395 0.0009 57_[+1]_15 chr8:27283841-27283921 0.0009 4_[+1]_68 chr10:5671965-5672045 0.00092 33_[+1]_39 chr4:152722881-152722961 0.001 55_[+1]_17 chr16:8223262-8223342 0.001 61_[+1]_11 chr20:44221374-44221454 0.001 67_[+1]_5 chr17:61045960-61046040 0.001 19_[+1]_53 chr12:6147417-6147497 0.001 5_[+1]_67 chr11:131564878-13156495 0.001 7_[+1]_65 chr2:42997845-42997925 0.001 6_[+1]_66 chr7:22599625-22599705 0.0011 8_[+1]_64 chr1:7727755-7727835 0.0011 69_[+1]_3 chr13:28107383-28107463 0.0011 14_[+1]_58 chr14:106986566-10698664 0.0011 29_[+1]_43 chr11:6272496-6272576 0.0011 50_[+1]_22 chr10:98135199-98135279 0.0011 58_[+1]_14 chr3:51753297-51753377 0.0011 6_[+1]_66 chr7:131229805-131229885 0.0013 12_[+1]_60 chr9:36008921-36009001 0.0013 19_[+1]_53 chr4:57826568-57826648 0.0013 53_[+1]_19 chr16:88814445-88814525 0.0013 1_[+1]_71 chr18:11519223-11519303 0.0013 29_[+1]_43 chr1:24711815-24711895 0.0013 61_[+1]_11 chr17:37392097-37392177 0.0014 6_[+1]_66 chr13:20534389-20534469 0.0017 22_[+1]_50 chr6:33600450-33600530 0.0017 72_[+1] chr16:27190969-27191049 0.0017 33_[+1]_39 chr22:37252530-37252610 0.0017 22_[+1]_50 chr19:4677266-4677346 0.0017 26_[+1]_46 chrX:155196687-155196767 0.0017 62_[+1]_10 chr8:140353259-140353339 0.0017 [+1]_72 chrX:100023870-100023950 0.0017 2_[+1]_70 chr6:29040038-29040118 0.0017 1_[+1]_71 chr14:90866028-90866108 0.0017 42_[+1]_30 chr16:23446892-23446972 0.0017 54_[+1]_18 chr19:4804062-4804142 0.0017 38_[+1]_34 chrX:40433174-40433254 0.0017 67_[+1]_5 chr2:44706698-44706778 0.0017 62_[+1]_10 chr12:107798947-10779902 0.0017 15_[+1]_57 chr13:40517068-40517148 0.0017 48_[+1]_24 chr16:28102404-28102484 0.0019 1_[+1]_71 chr3:115538779-115538859 0.0019 57_[+1]_15 chr12:54140551-54140631 0.0019 3_[+1]_69 chr8:10786088-10786168 0.0019 65_[+1]_7 chr15:27262509-27262589 0.0019 58_[+1]_14 chr3:139072926-139073006 0.0019 12_[+1]_60 chr1:201192142-201192222 0.0019 37_[+1]_35 chr2:238421574-238421654 0.0019 54_[+1]_18 chr4:16918514-16918594 0.0019 19_[+1]_53 chr20:412220-412300 0.0021 12_[+1]_60 chr19:56821091-56821171 0.0021 15_[+1]_57 chr11:111299925-11130000 0.0021 23_[+1]_49 chr1:120217563-120217643 0.0021 57_[+1]_15 chr18:42792850-42792930 0.0021 32_[+1]_40 chr1:181394186-181394266 0.0023 69_[+1]_3 chr12:54595246-54595326 0.0023 22_[+1]_50 chr11:107870647-10787072 0.0023 55_[+1]_17 chr6:148899459-148899539 0.0023 65_[+1]_7 chr8:81152965-81153045 0.0024 18_[+1]_54 chr3:52035629-52035709 0.0026 26_[+1]_46 chr20:1484435-1484515 0.0026 31_[+1]_41 chr5:145770202-145770282 0.0028 43_[+1]_29 chr20:31683898-31683978 0.0028 53_[+1]_19 chr19:46580956-46581036 0.0028 35_[+1]_37 chr1:54535899-54535979 0.0028 58_[+1]_14 chr9:71199492-71199572 0.0028 1_[+1]_71 chr17:19266320-19266400 0.0028 61_[+1]_11 chr1:8035473-8035553 0.0028 51_[+1]_21 chr9:7234291-7234371 0.0032 50_[+1]_22 chr13:46700862-46700942 0.0032 68_[+1]_4 chr16:74743450-74743530 0.0032 45_[+1]_27 chr16:24528455-24528535 0.0032 53_[+1]_19 chr4:82297052-82297132 0.0032 5_[+1]_67 chr1:34098785-34098865 0.0035 42_[+1]_30 chr12:119882398-11988247 0.0035 47_[+1]_25 chr6:152085569-152085649 0.0035 62_[+1]_10 chr8:29493641-29493721 0.0035 47_[+1]_25 chr15:64973765-64973845 0.0038 64_[+1]_8 chr12:119458724-11945880 0.0038 50_[+1]_22 chr13:112051235-11205131 0.0041 48_[+1]_24 chr22:43263889-43263969 0.0041 9_[+1]_63 chr15:70805239-70805319 0.0041 5_[+1]_67 chr1:118385644-118385724 0.0043 25_[+1]_47 chr5:179095545-179095625 0.0043 6_[+1]_66 chr3:46759418-46759498 0.0046 57_[+1]_15 chr17:49399920-49400000 0.0046 7_[+1]_65 chr13:100568896-10056897 0.0046 64_[+1]_8 chrX:132926623-132926703 0.0046 55_[+1]_17 chr19:36542300-36542380 0.0049 36_[+1]_36 chr20:11993049-11993129 0.0049 48_[+1]_24 chrX:108729106-108729186 0.0053 24_[+1]_48 chr12:29470861-29470941 0.0053 48_[+1]_24 chr14:25148278-25148358 0.0053 23_[+1]_49 chr2:210288540-210288620 0.0053 44_[+1]_28 chr9:90788454-90788534 0.0053 25_[+1]_47 chr3:31608674-31608754 0.0053 16_[+1]_56 chr18:45275646-45275726 0.0066 4_[+1]_68 chr9:98980590-98980670 0.0066 26_[+1]_46 chr7:4837849-4837929 0.0066 61_[+1]_11 chrX:64815426-64815506 0.0073 35_[+1]_37 chr8:139739784-139739864 0.0073 13_[+1]_59 chr8:127888986-127889066 0.0073 5_[+1]_67 chr7:91808336-91808416 0.0076 66_[+1]_6 chr3:73143344-73143424 0.0076 17_[+1]_55 chr8:41815469-41815549 0.008 11_[+1]_61 chr14:69255770-69255850 0.0085 63_[+1]_9 chr10:106051314-10605139 0.009 28_[+1]_44 chr11:60253536-60253616 0.009 61_[+1]_11 chr11:62092526-62092606 0.009 52_[+1]_20 chr9:34664432-34664512 0.009 39_[+1]_33 chr12:31399183-31399263 0.0096 54_[+1]_18 chr17:46755908-46755988 0.0096 53_[+1]_19 chr3:127174539-127174619 0.011 29_[+1]_43 chr7:4035016-4035096 0.012 51_[+1]_21 chr2:48772546-48772626 0.013 51_[+1]_21 chr9:97890039-97890119 0.014 65_[+1]_7 chr10:102321895-10232197 0.015 58_[+1]_14 chr15:74913561-74913641 0.015 43_[+1]_29 chr11:2952116-2952196 0.018 42_[+1]_30 chr3:126108243-126108323 0.02 14_[+1]_58 chr13:112157646-11215772 0.025 70_[+1]_2 chr19:50073559-50073639 0.027 44_[+1]_28 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTGCWGG width=8 seqs=250 chr9:34675208-34675288 ( 5) CCTGCAGG 1 chr2:28789768-28789848 ( 2) CCTGCAGG 1 chr12:110348859-11034893 ( 26) CCTGCAGG 1 chr16:68544220-68544300 ( 29) CCTGCAGG 1 chr17:42160979-42161059 ( 41) CCTGCAGG 1 chr9:95397115-95397195 ( 19) CCTGCAGG 1 chr2:17081818-17081898 ( 23) CCTGCAGG 1 chr16:84992800-84992880 ( 45) CCTGCAGG 1 chr15:45722597-45722677 ( 55) CCTGCAGG 1 chr2:15044068-15044148 ( 12) CCTGCAGG 1 chr21:47016766-47016846 ( 12) CCTGCAGG 1 chr1:200885453-200885533 ( 18) CCTGCAGG 1 chr12:130516273-13051635 ( 16) CCTGCAGG 1 chr1:203840321-203840401 ( 50) CCTGCTGG 1 chr7:148224858-148224938 ( 28) CCTGCTGG 1 chr17:34131874-34131954 ( 55) CCTGCTGG 1 chr3:52419342-52419422 ( 70) CCTGCTGG 1 chr1:204593292-204593372 ( 6) CCTGCTGG 1 chr9:138304567-138304647 ( 13) CCTGCTGG 1 chrX:73770296-73770376 ( 11) CCTGCTGG 1 chr4:48965229-48965309 ( 5) CCTGCTGG 1 chr17:72350334-72350414 ( 55) CCTGCTGG 1 chr4:148788091-148788171 ( 10) CCTGCTGG 1 chr1:66708489-66708569 ( 6) CCTGCTGG 1 chr14:106501592-10650167 ( 49) CCTGCTGG 1 chr17:78623986-78624066 ( 23) CCTGCTGG 1 chr4:146478960-146479040 ( 26) CCTGCTGG 1 chr16:8729361-8729441 ( 62) CCTGCTGG 1 chr20:36569914-36569994 ( 7) TCTGCAGG 1 chr5:169766040-169766120 ( 73) TCTGCAGG 1 chr10:134036726-13403680 ( 28) TCTGCAGG 1 chr17:47485492-47485572 ( 68) CCAGCAGG 1 chr11:5621665-5621745 ( 59) CCAGCAGG 1 chr16:11626148-11626228 ( 20) CCAGCAGG 1 chr3:119540003-119540083 ( 12) CCAGCAGG 1 chr15:74420003-74420083 ( 38) CCAGCAGG 1 chr22:47826629-47826709 ( 29) CCAGCAGG 1 chr19:15695603-15695683 ( 38) CCAGCAGG 1 chr22:32774812-32774892 ( 71) CCAGCAGG 1 chr16:48387637-48387717 ( 61) CCAGCAGG 1 chr10:118976264-11897634 ( 62) CCAGCAGG 1 chr14:96567052-96567132 ( 11) CCAGCAGG 1 chr20:25275230-25275310 ( 13) CCAGCAGG 1 chr12:53937384-53937464 ( 52) CCAGCAGG 1 chr19:42924322-42924402 ( 14) CCAGCAGG 1 chr19:13200130-13200210 ( 61) CCAGCAGG 1 chr9:131626010-131626090 ( 11) CCAGCAGG 1 chr15:39110031-39110111 ( 49) CCAGCAGG 1 chr7:101151219-101151299 ( 9) TCTGCTGG 1 chr15:90514919-90514999 ( 46) TCTGCTGG 1 chr18:68101275-68101355 ( 43) TCTGCTGG 1 chr11:76802353-76802433 ( 25) TCTGCTGG 1 chr2:11568-11648 ( 39) TCTGCTGG 1 chrX:12789729-12789809 ( 39) TCTGCTGG 1 chr19:50982508-50982588 ( 54) TCTGCTGG 1 chr21:43801659-43801739 ( 20) CCAGCTGG 1 chr12:104026493-10402657 ( 17) CCTGGAGG 1 chr16:28519529-28519609 ( 73) CCTGGAGG 1 chr4:83660612-83660692 ( 41) CCTGGAGG 1 chr11:120173893-12017397 ( 3) CCTGGAGG 1 chr19:6048107-6048187 ( 20) CCTGGAGG 1 chr2:190008023-190008103 ( 28) CCTGGAGG 1 chrX:153212910-153212990 ( 5) CCTCCAGG 1 chr2:20155747-20155827 ( 66) CCTCCAGG 1 chr6:164768661-164768741 ( 71) CCTACAGG 1 chr11:9142650-9142730 ( 31) CCTCCAGG 1 chrX:152665688-152665768 ( 57) CCTCCAGG 1 chr10:88109394-88109474 ( 14) CCTACAGG 1 chr5:43627267-43627347 ( 20) CCTCCAGG 1 chr3:48477532-48477612 ( 70) CCTGGTGG 1 chr1:224922411-224922491 ( 14) CCTGGTGG 1 chr18:60251685-60251765 ( 71) CCTGGTGG 1 chr15:74257204-74257284 ( 53) CCTGGTGG 1 chr9:136608253-136608333 ( 5) CCTGGTGG 1 chr15:30218175-30218255 ( 20) CCTGGTGG 1 chr5:176883476-176883556 ( 60) CCTGGTGG 1 chr13:30046637-30046717 ( 57) CCTGGTGG 1 chr14:21560786-21560866 ( 66) CCTCCTGG 1 chr16:48151557-48151637 ( 62) CCTCCTGG 1 chr18:9792718-9792798 ( 34) CCTACTGG 1 chr3:51672042-51672122 ( 70) CCTCCTGG 1 chr14:69378463-69378543 ( 73) CCTCCTGG 1 chrX:138208827-138208907 ( 62) TCAGCAGG 1 chr11:59961243-59961323 ( 16) CCTGCAGT 1 chr1:44760545-44760625 ( 30) TCTGGAGG 1 chrX:104166964-104167044 ( 51) TCAGCTGG 1 chr1:86965841-86965921 ( 24) CCTGTAGG 1 chr10:7729364-7729444 ( 50) TCAGCTGG 1 chr1:19233687-19233767 ( 13) TCAGCTGG 1 chr2:78900306-78900386 ( 70) CCTGCAGA 1 chr5:61064688-61064768 ( 18) CCTGTAGG 1 chr11:36768770-36768850 ( 8) TCTGGAGG 1 chr7:133538698-133538778 ( 59) TCTGGAGG 1 chr2:223555444-223555524 ( 65) CCTGCAGA 1 chr14:107147764-10714784 ( 39) CCTGCTGT 1 chr5:149217413-149217493 ( 52) GCTGCAGG 1 chr12:14607186-14607266 ( 67) CCTGCTGT 1 chr8:20233854-20233934 ( 15) CCTGCTGT 1 chr20:33894911-33894991 ( 44) CCTGCTGT 1 chr17:4443661-4443741 ( 52) CCTGCTGT 1 chr11:67415740-67415820 ( 37) GCTGCAGG 1 chr8:86133000-86133080 ( 22) CCAGGAGG 1 chr15:90442030-90442110 ( 35) CCTGCTGT 1 chr12:125391451-12539153 ( 11) GCTGCAGG 1 chr15:79299597-79299677 ( 28) CCTGAAGG 1 chr12:26587409-26587489 ( 60) TCTGGTGG 1 chr8:57154649-57154729 ( 14) TCTGGTGG 1 chr7:149015286-149015366 ( 68) CCAACAGG 1 chr11:6319969-6320049 ( 63) CCACCAGG 1 chr1:155176788-155176868 ( 15) CCACCAGG 1 chr9:134731618-134731698 ( 2) TCTGGTGG 1 chr2:135208563-135208643 ( 72) CCAACAGG 1 chr22:41973035-41973115 ( 55) CCACCAGG 1 chr17:75210921-75211001 ( 24) TCTGGTGG 1 chr12:111736800-11173688 ( 19) TCTGGTGG 1 chrX:38487092-38487172 ( 59) TCTGGTGG 1 chrX:152805056-152805136 ( 64) CCACCAGG 1 chr4:140578291-140578371 ( 15) TCTGGTGG 1 chr16:57625458-57625538 ( 20) CCACCAGG 1 chrX:9963952-9964032 ( 18) CCACCAGG 1 chr3:184521201-184521281 ( 19) TCTGGTGG 1 chr3:113874397-113874477 ( 29) TCTCCTGG 1 chr12:49947439-49947519 ( 16) CCAGGTGG 1 chr3:164924665-164924745 ( 68) GCTGCTGG 1 chr6:109235596-109235676 ( 70) CCTGATGG 1 chr14:22568645-22568725 ( 7) CCACCTGG 1 chr2:72364754-72364834 ( 67) CCTAGAGG 1 chr12:262470-262550 ( 8) CCTAGAGG 1 chr5:179190315-179190395 ( 58) CCTGCAGC 1 chr8:27283841-27283921 ( 5) CCACCTGG 1 chr10:5671965-5672045 ( 34) TCTGCAGT 1 chr4:152722881-152722961 ( 56) CCTAGTGG 1 chr16:8223262-8223342 ( 62) CCTAGTGG 1 chr20:44221374-44221454 ( 68) CCTAGTGG 1 chr17:61045960-61046040 ( 20) TCTGTAGG 1 chr12:6147417-6147497 ( 6) CCTAGTGG 1 chr11:131564878-13156495 ( 8) CCTGCTGC 1 chr2:42997845-42997925 ( 7) CCTAGTGG 1 chr7:22599625-22599705 ( 9) CCAGCAGA 1 chr1:7727755-7727835 ( 70) CCAGCAGA 1 chr13:28107383-28107463 ( 15) CCAGCAGA 1 chr14:106986566-10698664 ( 30) TCTGAAGG 1 chr11:6272496-6272576 ( 51) CCAGCAGA 1 chr10:98135199-98135279 ( 59) CCAGCAGA 1 chr3:51753297-51753377 ( 7) CCAGCAGA 1 chr7:131229805-131229885 ( 13) GCAGCAGG 1 chr9:36008921-36009001 ( 20) CCAGAAGG 1 chr4:57826568-57826648 ( 54) TCACCAGG 1 chr16:88814445-88814525 ( 2) CCAGAAGG 1 chr18:11519223-11519303 ( 30) TCTGTTGG 1 chr1:24711815-24711895 ( 62) GCAGCAGG 1 chr17:37392097-37392177 ( 7) TCAGGTGG 1 chr13:20534389-20534469 ( 23) TCTGCAGC 1 chr6:33600450-33600530 ( 73) ACTGCAGG 1 chr16:27190969-27191049 ( 34) GCAGCTGG 1 chr22:37252530-37252610 ( 23) CCTCTAGG 1 chr19:4677266-4677346 ( 27) TCTCGAGG 1 chrX:155196687-155196767 ( 63) CCAGATGG 1 chr8:140353259-140353339 ( 1) CCTGGTGT 1 chrX:100023870-100023950 ( 3) CCTGGTGT 1 chr6:29040038-29040118 ( 2) GCAGCTGG 1 chr14:90866028-90866108 ( 43) GCAGCTGG 1 chr16:23446892-23446972 ( 55) CCTTCTGG 1 chr19:4804062-4804142 ( 39) CCTTCTGG 1 chrX:40433174-40433254 ( 68) CCAGATGG 1 chr2:44706698-44706778 ( 63) CCTATAGG 1 chr12:107798947-10779902 ( 16) TCTAGAGG 1 chr13:40517068-40517148 ( 49) TCTAGAGG 1 chr16:28102404-28102484 ( 2) CCAGCAGC 1 chr3:115538779-115538859 ( 58) CCACGAGG 1 chr12:54140551-54140631 ( 4) CCTCCTGT 1 chr8:10786088-10786168 ( 66) GCTCCAGG 1 chr15:27262509-27262589 ( 59) CCTACTGT 1 chr3:139072926-139073006 ( 13) CCTCCTGT 1 chr1:201192142-201192222 ( 38) GCTCCAGG 1 chr2:238421574-238421654 ( 55) CCAGCAGC 1 chr4:16918514-16918594 ( 20) CCTCCTGT 1 chr20:412220-412300 ( 13) TCTGCTGC 1 chr19:56821091-56821171 ( 16) TCTAGTGG 1 chr11:111299925-11130000 ( 24) CCTACTGA 1 chr1:120217563-120217643 ( 58) TCTAGTGG 1 chr18:42792850-42792930 ( 33) TCTAGTGG 1 chr1:181394186-181394266 ( 70) CCAAGTGG 1 chr12:54595246-54595326 ( 23) CCTGGAGC 1 chr11:107870647-10787072 ( 56) CCAGCTGC 1 chr6:148899459-148899539 ( 66) GCTCCTGG 1 chr8:81152965-81153045 ( 19) CCTCCAGC 1 chr3:52035629-52035709 ( 27) CCAGGAGT 1 chr20:1484435-1484515 ( 32) GCTGCAGT 1 chr5:145770202-145770282 ( 44) TCTCCAGA 1 chr20:31683898-31683978 ( 54) TCTCTAGG 1 chr19:46580956-46581036 ( 36) CCTACTGC 1 chr1:54535899-54535979 ( 59) CCACCAGT 1 chr9:71199492-71199572 ( 2) CCTCCTGC 1 chr17:19266320-19266400 ( 62) GCTGCAGA 1 chr1:8035473-8035553 ( 52) GCTGCAGA 1 chr9:7234291-7234371 ( 51) TCTGGTGA 1 chr13:46700862-46700942 ( 69) GCTGAAGG 1 chr16:74743450-74743530 ( 46) CCACCAGA 1 chr16:24528455-24528535 ( 54) CCACTAGG 1 chr4:82297052-82297132 ( 6) CCACTAGG 1 chr1:34098785-34098865 ( 43) GCTGCTGA 1 chr12:119882398-11988247 ( 48) CCACAAGG 1 chr6:152085569-152085649 ( 63) GCTGCTGA 1 chr8:29493641-29493721 ( 48) CCACAAGG 1 chr15:64973765-64973845 ( 65) CCTTGTGG 1 chr12:119458724-11945880 ( 51) CCTAGAGA 1 chr13:112051235-11205131 ( 49) TCTACAGC 1 chr22:43263889-43263969 ( 10) CCTAGTGT 1 chr15:70805239-70805319 ( 6) TCTACAGC 1 chr1:118385644-118385724 ( 26) CCAACAGC 1 chr5:179095545-179095625 ( 7) CCACCAGC 1 chr3:46759418-46759498 ( 58) GCTCGTGG 1 chr17:49399920-49400000 ( 8) TCTGTTGT 1 chr13:100568896-10056897 ( 65) CCAGTAGA 1 chrX:132926623-132926703 ( 56) CCAGTAGA 1 chr19:36542300-36542380 ( 37) TCAGGTGT 1 chr20:11993049-11993129 ( 49) CCTTTAGG 1 chrX:108729106-108729186 ( 25) CCTCTAGT 1 chr12:29470861-29470941 ( 49) GCAGCTGT 1 chr14:25148278-25148358 ( 24) CCTCTAGT 1 chr2:210288540-210288620 ( 45) GCAGAAGG 1 chr9:90788454-90788534 ( 26) TCACAAGG 1 chr3:31608674-31608754 ( 17) CCTTAAGG 1 chr18:45275646-45275726 ( 5) CCTGGCGG 1 chr9:98980590-98980670 ( 27) CCTGGCGG 1 chr7:4837849-4837929 ( 62) ACACCAGG 1 chrX:64815426-64815506 ( 36) GCAAGTGG 1 chr8:139739784-139739864 ( 14) ACTAGAGG 1 chr8:127888986-127889066 ( 6) CCTCTAGC 1 chr7:91808336-91808416 ( 67) TCCGCAGG 1 chr3:73143344-73143424 ( 18) GCTGTAGT 1 chr8:41815469-41815549 ( 12) CCATCTGT 1 chr14:69255770-69255850 ( 64) GCTGAAGA 1 chr10:106051314-10605139 ( 29) CCTTGTGT 1 chr11:60253536-60253616 ( 62) GCTTGAGG 1 chr11:62092526-62092606 ( 53) CCTCCTTG 1 chr9:34664432-34664512 ( 40) ACAGAAGG 1 chr12:31399183-31399263 ( 55) TCTCCCGG 1 chr17:46755908-46755988 ( 54) CCGGCAGG 1 chr3:127174539-127174619 ( 30) CCTGCCGC 1 chr7:4035016-4035096 ( 52) TCTACTTG 1 chr2:48772546-48772626 ( 52) ACTCCTGC 1 chr9:97890039-97890119 ( 66) TCCACTGG 1 chr10:102321895-10232197 ( 59) GCAGTTGC 1 chr15:74913561-74913641 ( 44) TCTGTTTG 1 chr11:2952116-2952196 ( 43) ACACCTGC 1 chr3:126108243-126108323 ( 15) GCTGACGG 1 chr13:112157646-11215772 ( 71) TCCACAGA 1 chr19:50073559-50073639 ( 45) CCTCTGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 6.16993 E= 4.0e-085 -302 111 -148 9 -1461 173 -1461 -1461 66 -465 -623 173 -61 -59 109 -267 -161 104 -35 -135 147 -391 -623 110 -1461 -1461 172 -408 -122 -191 128 -97 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 250 E= 4.0e-085 0.024000 0.652000 0.108000 0.216000 0.000000 1.000000 0.000000 0.000000 0.308000 0.012000 0.004000 0.676000 0.128000 0.200000 0.640000 0.032000 0.064000 0.620000 0.236000 0.080000 0.540000 0.020000 0.004000 0.436000 0.000000 0.000000 0.988000 0.012000 0.084000 0.080000 0.732000 0.104000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGCWGG MEME-1 regular expression -------------------------------------------------------------------------------- [CT]C[TA][GC][CG][AT]GG -------------------------------------------------------------------------------- Time 4.81 secs. ******************************************************************************** ******************************************************************************** MOTIF YGCCCYCT MEME-2 width = 8 sites = 85 llr = 624 E-value = 1.7e-023 ******************************************************************************** -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::::2::: pos.-specific C 5:9a75a: probability G :71::::: matrix T 53::15:a bits 2.4 2.1 * 1.9 * 1.7 * ** Relative 1.4 * ** Entropy 1.2 ** ** (10.6 bits) 0.9 **** *** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CGCCCCCT consensus TT AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr13:112051235-11205131 70 2.06e-05 TGGATGCGTG TGCCCTCT ACA chr9:95397115-95397195 53 2.06e-05 GGAGCAACAC TGCCCTCT GCAGGCTCAG chr14:69255770-69255850 53 2.06e-05 GGCCCACGGG TGCCCTCT GGCGCTGAAG chr19:4804062-4804142 5 2.06e-05 ATGG TGCCCTCT GGTGACACTG chr15:74913561-74913641 53 2.06e-05 CTCTGTTTGG TGCCCTCT ATCGATCGTC chr16:88814445-88814525 69 2.06e-05 GCCTCCTCTC TGCCCTCT GCTG chr18:11519223-11519303 46 2.06e-05 GGCGGATGCG TGCCCTCT AGTGGCAATT chr12:130516273-13051635 51 2.06e-05 CCGCTGCTGC TGCCCTCT AGTGGCGATT chr7:101151219-101151299 64 5.11e-05 gatatgatgg cgccctct agggttgtg chr7:149015286-149015366 1 5.11e-05 . CGCCCTCT TCAGGCATGC chr11:6319969-6320049 5 5.11e-05 AGCA CGCCCTCT GCTGACCAGC chr12:104026493-10402657 64 5.11e-05 gtcccgccag cgccctct actggcaaa chr2:135208563-135208643 11 5.11e-05 GGGCCAGTGC CGCCCTCT CCTGGGCTCT chr2:72364754-72364834 17 5.11e-05 CCATTTCCTG CGCCCTCT AGCGATGGCT chr14:106986566-10698664 6 5.11e-05 CTGAG CGCCCTCT GGTGTTCTGA chr15:79299597-79299677 52 5.11e-05 TACCACACAG CGCCCTCT GGTGCTTACG chr4:57826568-57826648 11 5.11e-05 gggaagctgc cgccctct agaggtaata chr12:107798947-10779902 55 5.11e-05 atgtgaatgg cgccctct agaattaagc chr13:112157646-11215772 55 8.17e-05 aaatccgtgc tGCCCCCT TCCTCACATC chr11:2952116-2952196 72 8.17e-05 GGGTCAACAC TGCCCCCT A chr5:179095545-179095625 30 8.17e-05 atgacaccag tgccccct cacgtccaca chr19:4677266-4677346 65 8.17e-05 AGCTCCCCAC TGCCCCCT AGGGGTTG chr8:20233854-20233934 70 8.17e-05 TGGTCTGCAT TGCCCCCT GGT chr17:61045960-61046040 67 8.17e-05 TTGTTATCAC TGCCCCCT TGTGTA chr17:42160979-42161059 70 8.17e-05 GGTTTCAGTG TGCCCCCT GCA chr12:262470-262550 66 8.17e-05 GCGGGTCGTC TGCCCCCT GCCGTTG chr9:90788454-90788534 16 8.17e-05 TCAGAGTTTA TGCCCCCT TGTCACAAGG chr14:107147764-10714784 72 1.41e-04 TGGTACTGAG CGCCCCCT G chr18:45275646-45275726 73 1.41e-04 GACGCTCTGG CGCCCCCT chr22:37252530-37252610 68 1.41e-04 CTGATCGCGG CGCCCCCT GGCGG chr1:181394186-181394266 24 1.41e-04 TCAATTTGTT TTCCCTCT TTTTCAGAAG chr8:140353259-140353339 49 1.41e-04 TGTGAAAGGC CGCCCCCT GGCGGTCCTC chr8:41815469-41815549 44 1.41e-04 TCACTTGCCC TTCCCTCT CCATTCCCCA chrX:73770296-73770376 71 1.41e-04 GGTAGCCGTG CGCCCCCT CC chr2:42997845-42997925 56 1.41e-04 AGCACACGTG CGCCCCCT GAGAGGGCTA chr1:200885453-200885533 52 1.41e-04 CGGAGCACAG CGCCCCCT GGAGAGGCTG chr14:106501592-10650167 6 1.41e-04 CTGAG CGCCCCCT GATGTCCTAA chr6:33600450-33600530 22 1.75e-04 CATCCTCCTG CTCCCTCT GCTGTTCAGA chr4:82297052-82297132 51 1.75e-04 ggtcaaagtg ctccctct gtgggtgggt chr19:36542300-36542380 52 1.75e-04 tgttcacagg ctccctct ggctgcaagc chr12:125391451-12539153 51 1.75e-04 GTCCCTGAAG CTCCCTCT TCCGGCAGAA chrX:40433174-40433254 21 1.75e-04 tgctctctgt ctccctct tgccttctgc chr1:66708489-66708569 60 1.75e-04 GGCAGTCTGC TGCCATCT GCTGGCTCAC chr5:169766040-169766120 10 1.75e-04 GAGCTTGAG CTCCCTCT AGTGAGGCAG chr19:42924322-42924402 72 1.75e-04 ctgtgtgctg ctccctct g chr4:16918514-16918594 28 1.75e-04 CGCCTCCTGT CTCCCTCT AGTGGCAGCC chr7:148224858-148224938 58 2.15e-04 ttcaGTTGGG cgccatct gctggttgtt chr11:120173893-12017397 18 2.15e-04 AGGGGAAGCT CGCCATCT AGTGGTTGAA chr9:97890039-97890119 54 2.15e-04 ATTGAGCCCG CGCCATCT AGCGTCCACT chr16:11626148-11626228 73 2.66e-04 CACTCACTAC TGCCACCT chr19:50073559-50073639 69 2.66e-04 GGAGCTCTCT CTCCCCCT ACTG chr20:33894911-33894991 12 2.66e-04 AGCAGCAATG CTCCCCCT GCTGTCCATA chr22:32774812-32774892 15 2.66e-04 GAGGCTGTGC TGCCACCT AGGGATGTGG chr4:148788091-148788171 71 2.66e-04 TGGGAAATTC TGCCACCT GG chr2:210288540-210288620 66 2.66e-04 AGCGGTCGTG CTCCCCCT CCCGGAC chr4:140578291-140578371 57 2.66e-04 CCTGGATTGA CTCCCCCT AGCGGTTTCA chr21:47016766-47016846 41 2.66e-04 TGCTCCACAC TGCCACCT GCTGTCAGCA chrX:104166964-104167044 73 3.04e-04 tgcctgctat cgccacct chr16:23446892-23446972 30 3.04e-04 TGCACAGCAG CGCCACCT CTGGCTCCTG chr2:17081818-17081898 55 3.04e-04 tcccacaata cgccacct gcaggctgag chr12:119458724-11945880 3 3.18e-04 GA TGCCTTCT CGCCCGTAGA chr16:57625458-57625538 47 3.18e-04 TGGCCACTTC TGCCTTCT TCCCTCATCC chr19:13200130-13200210 70 3.31e-04 TCCAGCAGGG CTCCATCT GGA chr12:54595246-54595326 64 3.65e-04 GGACAGGCAG TTCCACCT CCCACCACC chrX:152665688-152665768 9 3.65e-04 CTTTCCAA TTCCACCT GTAGGGGGCC chr20:1484435-1484515 57 3.65e-04 GGTACTGAAG TTCCACCT AGTTTCTGTC chr18:42792850-42792930 65 3.86e-04 TGCTCCATAG TGCCTCCT TAGGCTGG chr12:110348859-11034893 66 4.06e-04 GAGCCAGCGC CTCCACCT GGCCAGG chr3:31608674-31608754 60 4.06e-04 TGGTACAGTG CTCCACCT CGCTGCCTTT chr5:145770202-145770282 16 4.46e-04 agtagcacac cgcctcct agttgtgaca chr4:48965229-48965309 69 4.46e-04 TCTGAATGAG CGCCTCCT CGAG chrX:138208827-138208907 12 4.73e-04 GCAAGAATAA TGACCTCT AGAGGGAGCT chr17:47485492-47485572 26 5.27e-04 GGCTGCAGCC TGGCCTCT TGCCAGCAGA chr1:224922411-224922491 59 5.27e-04 AATTTCAGGC TGGCCTCT GGGAGGCGTC chr10:106051314-10605139 18 5.27e-04 CCCCGCGCGC TTCCTCCT TCCCCTTGTG chr6:109235596-109235676 37 5.27e-04 GCTGTAGAAG TTCCTCCT CACTGCCCAC chr15:74257204-74257284 11 5.98e-04 tggtcttgcc ctcctcct ggtggtaaat chr3:52419342-52419422 1 5.98e-04 . TGACCCCT AGCTGCTGCG chr9:134731618-134731698 73 5.98e-04 AACGGCGTCC CGGCCTCT chr18:9792718-9792798 60 5.98e-04 ggcagtacac tgacccct agaggcaagg chr19:50982508-50982588 31 5.98e-04 tcctgcatca cggcctct tcctgcactg chr12:49947439-49947519 56 5.98e-04 aaacctccat tgacccct tctggtgaga chr3:127174539-127174619 64 7.48e-04 CGCAGCCGAG CGGCCCCT AGCTGTGCA chr20:31683898-31683978 14 9.01e-04 TGGTCACTAT TGCCCTCA TGTGGCTGCA chr1:201192142-201192222 7 9.01e-04 AGGTAC TGCCCTCA CTTGGCGGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr13:112051235-11205131 2.1e-05 69_[+2]_3 chr9:95397115-95397195 2.1e-05 52_[+2]_20 chr14:69255770-69255850 2.1e-05 52_[+2]_20 chr19:4804062-4804142 2.1e-05 4_[+2]_68 chr15:74913561-74913641 2.1e-05 52_[+2]_20 chr16:88814445-88814525 2.1e-05 68_[+2]_4 chr18:11519223-11519303 2.1e-05 45_[+2]_27 chr12:130516273-13051635 2.1e-05 50_[+2]_22 chr7:101151219-101151299 5.1e-05 63_[+2]_9 chr7:149015286-149015366 5.1e-05 [+2]_72 chr11:6319969-6320049 5.1e-05 4_[+2]_68 chr12:104026493-10402657 5.1e-05 63_[+2]_9 chr2:135208563-135208643 5.1e-05 10_[+2]_62 chr2:72364754-72364834 5.1e-05 16_[+2]_56 chr14:106986566-10698664 5.1e-05 5_[+2]_67 chr15:79299597-79299677 5.1e-05 51_[+2]_21 chr4:57826568-57826648 5.1e-05 10_[+2]_62 chr12:107798947-10779902 5.1e-05 54_[+2]_18 chr13:112157646-11215772 8.2e-05 54_[+2]_18 chr11:2952116-2952196 8.2e-05 71_[+2]_1 chr5:179095545-179095625 8.2e-05 29_[+2]_43 chr19:4677266-4677346 8.2e-05 64_[+2]_8 chr8:20233854-20233934 8.2e-05 69_[+2]_3 chr17:61045960-61046040 8.2e-05 66_[+2]_6 chr17:42160979-42161059 8.2e-05 69_[+2]_3 chr12:262470-262550 8.2e-05 65_[+2]_7 chr9:90788454-90788534 8.2e-05 15_[+2]_57 chr14:107147764-10714784 0.00014 71_[+2]_1 chr18:45275646-45275726 0.00014 72_[+2] chr22:37252530-37252610 0.00014 67_[+2]_5 chr1:181394186-181394266 0.00014 23_[+2]_49 chr8:140353259-140353339 0.00014 48_[+2]_24 chr8:41815469-41815549 0.00014 43_[+2]_29 chrX:73770296-73770376 0.00014 70_[+2]_2 chr2:42997845-42997925 0.00014 55_[+2]_17 chr1:200885453-200885533 0.00014 51_[+2]_21 chr14:106501592-10650167 0.00014 5_[+2]_67 chr6:33600450-33600530 0.00017 21_[+2]_51 chr4:82297052-82297132 0.00017 50_[+2]_22 chr19:36542300-36542380 0.00017 51_[+2]_21 chr12:125391451-12539153 0.00017 50_[+2]_22 chrX:40433174-40433254 0.00017 20_[+2]_52 chr1:66708489-66708569 0.00017 59_[+2]_13 chr5:169766040-169766120 0.00017 9_[+2]_63 chr19:42924322-42924402 0.00017 71_[+2]_1 chr4:16918514-16918594 0.00017 27_[+2]_45 chr7:148224858-148224938 0.00022 57_[+2]_15 chr11:120173893-12017397 0.00022 17_[+2]_55 chr9:97890039-97890119 0.00022 53_[+2]_19 chr16:11626148-11626228 0.00027 72_[+2] chr19:50073559-50073639 0.00027 68_[+2]_4 chr20:33894911-33894991 0.00027 11_[+2]_61 chr22:32774812-32774892 0.00027 14_[+2]_58 chr4:148788091-148788171 0.00027 70_[+2]_2 chr2:210288540-210288620 0.00027 65_[+2]_7 chr4:140578291-140578371 0.00027 56_[+2]_16 chr21:47016766-47016846 0.00027 40_[+2]_32 chrX:104166964-104167044 0.0003 72_[+2] chr16:23446892-23446972 0.0003 29_[+2]_43 chr2:17081818-17081898 0.0003 54_[+2]_18 chr12:119458724-11945880 0.00032 2_[+2]_70 chr16:57625458-57625538 0.00032 46_[+2]_26 chr19:13200130-13200210 0.00033 69_[+2]_3 chr12:54595246-54595326 0.00037 63_[+2]_9 chrX:152665688-152665768 0.00037 8_[+2]_64 chr20:1484435-1484515 0.00037 56_[+2]_16 chr18:42792850-42792930 0.00039 64_[+2]_8 chr12:110348859-11034893 0.00041 65_[+2]_7 chr3:31608674-31608754 0.00041 59_[+2]_13 chr5:145770202-145770282 0.00045 15_[+2]_57 chr4:48965229-48965309 0.00045 68_[+2]_4 chrX:138208827-138208907 0.00047 11_[+2]_61 chr17:47485492-47485572 0.00053 25_[+2]_47 chr1:224922411-224922491 0.00053 58_[+2]_14 chr10:106051314-10605139 0.00053 17_[+2]_55 chr6:109235596-109235676 0.00053 36_[+2]_36 chr15:74257204-74257284 0.0006 10_[+2]_62 chr3:52419342-52419422 0.0006 [+2]_72 chr9:134731618-134731698 0.0006 72_[+2] chr18:9792718-9792798 0.0006 59_[+2]_13 chr19:50982508-50982588 0.0006 30_[+2]_42 chr12:49947439-49947519 0.0006 55_[+2]_17 chr3:127174539-127174619 0.00075 63_[+2]_9 chr20:31683898-31683978 0.0009 13_[+2]_59 chr1:201192142-201192222 0.0009 6_[+2]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YGCCCYCT width=8 seqs=85 chr13:112051235-11205131 ( 70) TGCCCTCT 1 chr9:95397115-95397195 ( 53) TGCCCTCT 1 chr14:69255770-69255850 ( 53) TGCCCTCT 1 chr19:4804062-4804142 ( 5) TGCCCTCT 1 chr15:74913561-74913641 ( 53) TGCCCTCT 1 chr16:88814445-88814525 ( 69) TGCCCTCT 1 chr18:11519223-11519303 ( 46) TGCCCTCT 1 chr12:130516273-13051635 ( 51) TGCCCTCT 1 chr7:101151219-101151299 ( 64) CGCCCTCT 1 chr7:149015286-149015366 ( 1) CGCCCTCT 1 chr11:6319969-6320049 ( 5) CGCCCTCT 1 chr12:104026493-10402657 ( 64) CGCCCTCT 1 chr2:135208563-135208643 ( 11) CGCCCTCT 1 chr2:72364754-72364834 ( 17) CGCCCTCT 1 chr14:106986566-10698664 ( 6) CGCCCTCT 1 chr15:79299597-79299677 ( 52) CGCCCTCT 1 chr4:57826568-57826648 ( 11) CGCCCTCT 1 chr12:107798947-10779902 ( 55) CGCCCTCT 1 chr13:112157646-11215772 ( 55) TGCCCCCT 1 chr11:2952116-2952196 ( 72) TGCCCCCT 1 chr5:179095545-179095625 ( 30) TGCCCCCT 1 chr19:4677266-4677346 ( 65) TGCCCCCT 1 chr8:20233854-20233934 ( 70) TGCCCCCT 1 chr17:61045960-61046040 ( 67) TGCCCCCT 1 chr17:42160979-42161059 ( 70) TGCCCCCT 1 chr12:262470-262550 ( 66) TGCCCCCT 1 chr9:90788454-90788534 ( 16) TGCCCCCT 1 chr14:107147764-10714784 ( 72) CGCCCCCT 1 chr18:45275646-45275726 ( 73) CGCCCCCT 1 chr22:37252530-37252610 ( 68) CGCCCCCT 1 chr1:181394186-181394266 ( 24) TTCCCTCT 1 chr8:140353259-140353339 ( 49) CGCCCCCT 1 chr8:41815469-41815549 ( 44) TTCCCTCT 1 chrX:73770296-73770376 ( 71) CGCCCCCT 1 chr2:42997845-42997925 ( 56) CGCCCCCT 1 chr1:200885453-200885533 ( 52) CGCCCCCT 1 chr14:106501592-10650167 ( 6) CGCCCCCT 1 chr6:33600450-33600530 ( 22) CTCCCTCT 1 chr4:82297052-82297132 ( 51) CTCCCTCT 1 chr19:36542300-36542380 ( 52) CTCCCTCT 1 chr12:125391451-12539153 ( 51) CTCCCTCT 1 chrX:40433174-40433254 ( 21) CTCCCTCT 1 chr1:66708489-66708569 ( 60) TGCCATCT 1 chr5:169766040-169766120 ( 10) CTCCCTCT 1 chr19:42924322-42924402 ( 72) CTCCCTCT 1 chr4:16918514-16918594 ( 28) CTCCCTCT 1 chr7:148224858-148224938 ( 58) CGCCATCT 1 chr11:120173893-12017397 ( 18) CGCCATCT 1 chr9:97890039-97890119 ( 54) CGCCATCT 1 chr16:11626148-11626228 ( 73) TGCCACCT 1 chr19:50073559-50073639 ( 69) CTCCCCCT 1 chr20:33894911-33894991 ( 12) CTCCCCCT 1 chr22:32774812-32774892 ( 15) TGCCACCT 1 chr4:148788091-148788171 ( 71) TGCCACCT 1 chr2:210288540-210288620 ( 66) CTCCCCCT 1 chr4:140578291-140578371 ( 57) CTCCCCCT 1 chr21:47016766-47016846 ( 41) TGCCACCT 1 chrX:104166964-104167044 ( 73) CGCCACCT 1 chr16:23446892-23446972 ( 30) CGCCACCT 1 chr2:17081818-17081898 ( 55) CGCCACCT 1 chr12:119458724-11945880 ( 3) TGCCTTCT 1 chr16:57625458-57625538 ( 47) TGCCTTCT 1 chr19:13200130-13200210 ( 70) CTCCATCT 1 chr12:54595246-54595326 ( 64) TTCCACCT 1 chrX:152665688-152665768 ( 9) TTCCACCT 1 chr20:1484435-1484515 ( 57) TTCCACCT 1 chr18:42792850-42792930 ( 65) TGCCTCCT 1 chr12:110348859-11034893 ( 66) CTCCACCT 1 chr3:31608674-31608754 ( 60) CTCCACCT 1 chr5:145770202-145770282 ( 16) CGCCTCCT 1 chr4:48965229-48965309 ( 69) CGCCTCCT 1 chrX:138208827-138208907 ( 12) TGACCTCT 1 chr17:47485492-47485572 ( 26) TGGCCTCT 1 chr1:224922411-224922491 ( 59) TGGCCTCT 1 chr10:106051314-10605139 ( 18) TTCCTCCT 1 chr6:109235596-109235676 ( 37) TTCCTCCT 1 chr15:74257204-74257284 ( 11) CTCCTCCT 1 chr3:52419342-52419422 ( 1) TGACCCCT 1 chr9:134731618-134731698 ( 73) CGGCCTCT 1 chr18:9792718-9792798 ( 60) TGACCCCT 1 chr19:50982508-50982588 ( 31) CGGCCTCT 1 chr12:49947439-49947519 ( 56) TGACCCCT 1 chr3:127174539-127174619 ( 64) CGGCCCCT 1 chr20:31683898-31683978 ( 14) TGCCCTCA 1 chr1:201192142-201192222 ( 7) TGCCCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.05851 E= 1.7e-023 -1305 81 -1305 121 -1305 -1305 128 41 -205 157 -235 -1305 -1305 173 -1305 -1305 4 123 -1305 -111 -1305 75 -1305 128 -1305 173 -1305 -1305 -305 -1305 -1305 226 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 85 E= 1.7e-023 0.000000 0.529412 0.000000 0.470588 0.000000 0.000000 0.729412 0.270588 0.047059 0.894118 0.058824 0.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.705882 0.000000 0.094118 0.000000 0.505882 0.000000 0.494118 0.000000 1.000000 0.000000 0.000000 0.023529 0.000000 0.000000 0.976471 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YGCCCYCT MEME-2 regular expression -------------------------------------------------------------------------------- [CT][GT]CC[CA][CT]CT -------------------------------------------------------------------------------- Time 8.09 secs. ******************************************************************************** ******************************************************************************** MOTIF AGRGGGCR MEME-3 width = 8 sites = 70 llr = 521 E-value = 1.3e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 Description -------------------------------------------------------------------------------- Simplified A a:71::34 pos.-specific C :::::17: probability G :a37a9:6 matrix T :::2::1: bits 2.4 * 2.1 * 1.9 * 1.7 ** * Relative 1.4 ** ** Entropy 1.2 *** ** (10.7 bits) 0.9 ****** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AGAGGGCG consensus GT AA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr20:412220-412300 3 2.78e-05 GC AGAGGGCG CCTCTGCTGC chr9:71199492-71199572 18 2.78e-05 GCCCTCCACA AGAGGGCG CCAGAATTCC chr20:36569914-36569994 23 2.78e-05 GGCTGCATGC AGAGGGCG CACTTTCTCA chr16:48387637-48387717 18 2.78e-05 TTCAGCAACC AGAGGGCG CTAATCCACA chr7:4837849-4837929 22 2.78e-05 GCGGGTCGGC AGAGGGCG CGGGGCGGAC chr12:119458724-11945880 18 2.78e-05 TCTCGCCCGT AGAGGGCG CTGTAGAGGC chr17:37392097-37392177 59 2.78e-05 GTCTAACTCC AGAGGGCG CTGTTCAGGG chr2:223555444-223555524 18 2.78e-05 AGGGCACACT AGAGGGCG CACTAAACCC chrX:132926623-132926703 23 2.78e-05 GCTGGACACC AGAGGGCG GTATACCCAC chr2:78900306-78900386 1 4.59e-05 . agagggca ctgttttggg chr11:131564878-13156495 20 4.59e-05 TGCTGCCACC AGAGGGCA GTGTTGGACG chrX:38487092-38487172 22 4.59e-05 TGCTTCCTCT AGAGGGCA GTGCCCTCCA chr8:27283841-27283921 64 4.59e-05 GTCAGGCACT AGAGGGCA CTCCAGGTA chr13:100568896-10056897 21 4.59e-05 GGCAGACACC AGAGGGCA ACATAATCTC chr17:47485492-47485572 41 6.39e-05 TCTTGCCAGC AGAGGGAG CCCCAAGCCC chrX:138208827-138208907 20 6.39e-05 AATGACCTCT AGAGGGAG CTGTGCTCCA chr1:203840321-203840401 18 6.39e-05 ATTGGGCAGC AGAGGGAG TTACAGCCCT chr4:57826568-57826648 71 6.39e-05 gactgacagc agagggag tt chr3:51672042-51672122 17 6.39e-05 GAGATCCTCA AGAGGGAG GTGTGGCAGG chr19:6048107-6048187 71 6.39e-05 GGTGACCTGC AGAGGGAG CA chr20:25275230-25275310 26 6.39e-05 GCAGGCCAGT AGAGGGAG CATGGGCCCA chr5:43627267-43627347 66 6.39e-05 tcaagccagc agagggag aacctct chr12:29470861-29470941 21 7.56e-05 TGAAGAAATT AGAGGGAA CACAGTGTGC chr4:152722881-152722961 20 9.44e-05 CTTCTCAGGA AGATGGCG CTGCCTCAGA chr3:164924665-164924745 17 9.44e-05 TAACGCCTCC AGATGGCG TGCTGGTGCT chr11:5621665-5621745 17 1.07e-04 ACAGAACACT AGATGGCA GCGCCAAGAA chrX:152805056-152805136 8 1.07e-04 CTGCAGC AGATGGCA GGCGTGAGCC chr1:34098785-34098865 9 1.49e-04 ACACCACA AGGGGGCG GTGTAGACAC chr16:27190969-27191049 18 1.49e-04 agtatactgt agggggcg cgagagcggc chr7:91808336-91808416 28 1.49e-04 CAGGACCGGT AGGGGGCG CGCGCGGTTG chr2:28789768-28789848 61 1.49e-04 TAAATTCACC AGGGGGCG CTGCCTCCCG chr1:86965841-86965921 66 1.49e-04 GACTTCCTGT AGGGGGCG ATAAAAT chr15:45722597-45722677 5 1.49e-04 CGGC AGGGGGCG CCAGCGCCCG chr7:133538698-133538778 15 1.49e-04 TATAGTCCCT AGGGGGCG GGGTGAGTCA chr6:109235596-109235676 20 1.49e-04 CCCCACCTCT AGGGGGCG CTGTAGAAGT chr1:54535899-54535979 18 1.77e-04 TATAATCACT AGGGGGCA ATAAGACCAT chr3:52035629-52035709 63 1.77e-04 ATCGTCCGCA AGGGGGCA GAGTGGGACC chr13:30046637-30046717 27 1.77e-04 ATTTGCCACC AGGGGGCA TTTTTCAGGC chr22:32774812-32774892 46 1.97e-04 GGGTCTGGAA AGATGGAA AGTAGTTCCC chr20:11993049-11993129 18 2.25e-04 aggctacacc agggggag acaaggctca chr3:139072926-139073006 72 2.62e-04 GCTGGACAGT AGAGGGTG C chr9:36008921-36009001 7 2.62e-04 gccact agagggtg cactcccaga chr12:53937384-53937464 22 2.62e-04 GTAGGCCACC AGAGGGTG TCTGTGTTGT chr14:69378463-69378543 31 2.62e-04 AATGGCCACT AGAGGGTG CTAGGGGAGC chr9:7234291-7234371 20 3.03e-04 tcaggtcggt aggtggcg ctgaaactga chr14:90866028-90866108 7 3.03e-04 tgcagt aggtggcg ctcttctgtc chr10:118976264-11897634 23 3.03e-04 AGCGGCCACC AGGTGGCG CGGCCAGACC chr2:44706698-44706778 21 3.03e-04 TGTCCCCAGT AGAGGGTA CTGCTGAGTA chr12:26587409-26587489 31 3.22e-04 CATGTACAAT AGGTGGCA GCAGAGCCTA chr7:22599625-22599705 67 3.22e-04 TTCCAGCACA AGGTGGCA GCACCG chr21:43801659-43801739 57 3.22e-04 ttctgcctcc aggtggca ccaacaggga chr5:179190315-179190395 10 3.22e-04 TCCACCCCT AGGTGGCA GGAGAAAGCA chr2:190008023-190008103 72 3.22e-04 AGTCACCCAG AGGTGGCA C chr10:134036726-13403680 61 3.22e-04 ATTTGCCAGG AGGTGGCA GCCGAGGCCC chr10:98135199-98135279 4 3.40e-04 gcc agaaggcg cctcccccga chr11:6272496-6272576 63 3.71e-04 AGCAGAGAGC AGAAGGCA CTTCTTCCTT chr2:42997845-42997925 65 3.71e-04 GCGCCCCCTG AGAGGGCT ACTATCCC chr3:51753297-51753377 67 3.71e-04 CCTGTGGCCT AGAAGGCA GCGGGC chr13:40517068-40517148 15 3.71e-04 AGCAGTCACT AGAGGGCT CACAGAGACG chr10:5671965-5672045 25 3.89e-04 ggcgtcctct aggtggag ctctgcagtg chr16:74743450-74743530 61 4.42e-04 AGAGGGCAGC AGAGGCCG GGAACAGGTG chr11:36768770-36768850 58 4.42e-04 TTGGGTGAAG AGGTGGAA GGTGACATAC chr18:68101275-68101355 8 4.68e-04 gcatata agaggcca tgtgagccca chr1:120217563-120217643 68 4.68e-04 tctagtgggc agaggcca gggtt chr12:110348859-11034893 43 4.80e-04 GCCCTCCTCG AGAAGGAG GACGAGAGCC chr11:9142650-9142730 7 5.29e-04 CAGGGG AGAGGGAT GGCCTCACTT chr8:41815469-41815549 62 5.29e-04 CCATTCCCCA AGGGGGTG CAATGTTTTG chrX:12789729-12789809 21 5.78e-04 ggtgcacagc agaggcag cactgcgcCC chr12:54595246-54595326 47 5.78e-04 GTGGCCGTGC AGAGGCAG GACAGGCAGT chr12:31399183-31399263 9 5.90e-04 ggcctcta agaggcaa cctcttagag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr20:412220-412300 2.8e-05 2_[+3]_70 chr9:71199492-71199572 2.8e-05 17_[+3]_55 chr20:36569914-36569994 2.8e-05 22_[+3]_50 chr16:48387637-48387717 2.8e-05 17_[+3]_55 chr7:4837849-4837929 2.8e-05 21_[+3]_51 chr12:119458724-11945880 2.8e-05 17_[+3]_55 chr17:37392097-37392177 2.8e-05 58_[+3]_14 chr2:223555444-223555524 2.8e-05 17_[+3]_55 chrX:132926623-132926703 2.8e-05 22_[+3]_50 chr2:78900306-78900386 4.6e-05 [+3]_72 chr11:131564878-13156495 4.6e-05 19_[+3]_53 chrX:38487092-38487172 4.6e-05 21_[+3]_51 chr8:27283841-27283921 4.6e-05 63_[+3]_9 chr13:100568896-10056897 4.6e-05 20_[+3]_52 chr17:47485492-47485572 6.4e-05 40_[+3]_32 chrX:138208827-138208907 6.4e-05 19_[+3]_53 chr1:203840321-203840401 6.4e-05 17_[+3]_55 chr4:57826568-57826648 6.4e-05 70_[+3]_2 chr3:51672042-51672122 6.4e-05 16_[+3]_56 chr19:6048107-6048187 6.4e-05 70_[+3]_2 chr20:25275230-25275310 6.4e-05 25_[+3]_47 chr5:43627267-43627347 6.4e-05 65_[+3]_7 chr12:29470861-29470941 7.6e-05 20_[+3]_52 chr4:152722881-152722961 9.4e-05 19_[+3]_53 chr3:164924665-164924745 9.4e-05 16_[+3]_56 chr11:5621665-5621745 0.00011 16_[+3]_56 chrX:152805056-152805136 0.00011 7_[+3]_65 chr1:34098785-34098865 0.00015 8_[+3]_64 chr16:27190969-27191049 0.00015 17_[+3]_55 chr7:91808336-91808416 0.00015 27_[+3]_45 chr2:28789768-28789848 0.00015 60_[+3]_12 chr1:86965841-86965921 0.00015 65_[+3]_7 chr15:45722597-45722677 0.00015 4_[+3]_68 chr7:133538698-133538778 0.00015 14_[+3]_58 chr6:109235596-109235676 0.00015 19_[+3]_53 chr1:54535899-54535979 0.00018 17_[+3]_55 chr3:52035629-52035709 0.00018 62_[+3]_10 chr13:30046637-30046717 0.00018 26_[+3]_46 chr22:32774812-32774892 0.0002 45_[+3]_27 chr20:11993049-11993129 0.00023 17_[+3]_55 chr3:139072926-139073006 0.00026 71_[+3]_1 chr9:36008921-36009001 0.00026 6_[+3]_66 chr12:53937384-53937464 0.00026 21_[+3]_51 chr14:69378463-69378543 0.00026 30_[+3]_42 chr9:7234291-7234371 0.0003 19_[+3]_53 chr14:90866028-90866108 0.0003 6_[+3]_66 chr10:118976264-11897634 0.0003 22_[+3]_50 chr2:44706698-44706778 0.0003 20_[+3]_52 chr12:26587409-26587489 0.00032 30_[+3]_42 chr7:22599625-22599705 0.00032 66_[+3]_6 chr21:43801659-43801739 0.00032 56_[+3]_16 chr5:179190315-179190395 0.00032 9_[+3]_63 chr2:190008023-190008103 0.00032 71_[+3]_1 chr10:134036726-13403680 0.00032 60_[+3]_12 chr10:98135199-98135279 0.00034 3_[+3]_69 chr11:6272496-6272576 0.00037 62_[+3]_10 chr2:42997845-42997925 0.00037 64_[+3]_8 chr3:51753297-51753377 0.00037 66_[+3]_6 chr13:40517068-40517148 0.00037 14_[+3]_58 chr10:5671965-5672045 0.00039 24_[+3]_48 chr16:74743450-74743530 0.00044 60_[+3]_12 chr11:36768770-36768850 0.00044 57_[+3]_15 chr18:68101275-68101355 0.00047 7_[+3]_65 chr1:120217563-120217643 0.00047 67_[+3]_5 chr12:110348859-11034893 0.00048 42_[+3]_30 chr11:9142650-9142730 0.00053 6_[+3]_66 chr8:41815469-41815549 0.00053 61_[+3]_11 chrX:12789729-12789809 0.00058 20_[+3]_52 chr12:54595246-54595326 0.00058 46_[+3]_26 chr12:31399183-31399263 0.00059 8_[+3]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGRGGGCR width=8 seqs=70 chr20:412220-412300 ( 3) AGAGGGCG 1 chr9:71199492-71199572 ( 18) AGAGGGCG 1 chr20:36569914-36569994 ( 23) AGAGGGCG 1 chr16:48387637-48387717 ( 18) AGAGGGCG 1 chr7:4837849-4837929 ( 22) AGAGGGCG 1 chr12:119458724-11945880 ( 18) AGAGGGCG 1 chr17:37392097-37392177 ( 59) AGAGGGCG 1 chr2:223555444-223555524 ( 18) AGAGGGCG 1 chrX:132926623-132926703 ( 23) AGAGGGCG 1 chr2:78900306-78900386 ( 1) AGAGGGCA 1 chr11:131564878-13156495 ( 20) AGAGGGCA 1 chrX:38487092-38487172 ( 22) AGAGGGCA 1 chr8:27283841-27283921 ( 64) AGAGGGCA 1 chr13:100568896-10056897 ( 21) AGAGGGCA 1 chr17:47485492-47485572 ( 41) AGAGGGAG 1 chrX:138208827-138208907 ( 20) AGAGGGAG 1 chr1:203840321-203840401 ( 18) AGAGGGAG 1 chr4:57826568-57826648 ( 71) AGAGGGAG 1 chr3:51672042-51672122 ( 17) AGAGGGAG 1 chr19:6048107-6048187 ( 71) AGAGGGAG 1 chr20:25275230-25275310 ( 26) AGAGGGAG 1 chr5:43627267-43627347 ( 66) AGAGGGAG 1 chr12:29470861-29470941 ( 21) AGAGGGAA 1 chr4:152722881-152722961 ( 20) AGATGGCG 1 chr3:164924665-164924745 ( 17) AGATGGCG 1 chr11:5621665-5621745 ( 17) AGATGGCA 1 chrX:152805056-152805136 ( 8) AGATGGCA 1 chr1:34098785-34098865 ( 9) AGGGGGCG 1 chr16:27190969-27191049 ( 18) AGGGGGCG 1 chr7:91808336-91808416 ( 28) AGGGGGCG 1 chr2:28789768-28789848 ( 61) AGGGGGCG 1 chr1:86965841-86965921 ( 66) AGGGGGCG 1 chr15:45722597-45722677 ( 5) AGGGGGCG 1 chr7:133538698-133538778 ( 15) AGGGGGCG 1 chr6:109235596-109235676 ( 20) AGGGGGCG 1 chr1:54535899-54535979 ( 18) AGGGGGCA 1 chr3:52035629-52035709 ( 63) AGGGGGCA 1 chr13:30046637-30046717 ( 27) AGGGGGCA 1 chr22:32774812-32774892 ( 46) AGATGGAA 1 chr20:11993049-11993129 ( 18) AGGGGGAG 1 chr3:139072926-139073006 ( 72) AGAGGGTG 1 chr9:36008921-36009001 ( 7) AGAGGGTG 1 chr12:53937384-53937464 ( 22) AGAGGGTG 1 chr14:69378463-69378543 ( 31) AGAGGGTG 1 chr9:7234291-7234371 ( 20) AGGTGGCG 1 chr14:90866028-90866108 ( 7) AGGTGGCG 1 chr10:118976264-11897634 ( 23) AGGTGGCG 1 chr2:44706698-44706778 ( 21) AGAGGGTA 1 chr12:26587409-26587489 ( 31) AGGTGGCA 1 chr7:22599625-22599705 ( 67) AGGTGGCA 1 chr21:43801659-43801739 ( 57) AGGTGGCA 1 chr5:179190315-179190395 ( 10) AGGTGGCA 1 chr2:190008023-190008103 ( 72) AGGTGGCA 1 chr10:134036726-13403680 ( 61) AGGTGGCA 1 chr10:98135199-98135279 ( 4) AGAAGGCG 1 chr11:6272496-6272576 ( 63) AGAAGGCA 1 chr2:42997845-42997925 ( 65) AGAGGGCT 1 chr3:51753297-51753377 ( 67) AGAAGGCA 1 chr13:40517068-40517148 ( 15) AGAGGGCT 1 chr10:5671965-5672045 ( 25) AGGTGGAG 1 chr16:74743450-74743530 ( 61) AGAGGCCG 1 chr11:36768770-36768850 ( 58) AGGTGGAA 1 chr18:68101275-68101355 ( 8) AGAGGCCA 1 chr1:120217563-120217643 ( 68) AGAGGCCA 1 chr12:110348859-11034893 ( 43) AGAAGGAG 1 chr11:9142650-9142730 ( 7) AGAGGGAT 1 chr8:41815469-41815549 ( 62) AGGGGGTG 1 chrX:12789729-12789809 ( 21) AGAGGCAG 1 chr12:54595246-54595326 ( 47) AGAGGCAG 1 chr12:31399183-31399263 ( 9) AGAGGCAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.84505 E= 1.3e-012 236 -1277 -1277 -1277 -1277 -1277 173 -1277 175 -1277 19 -1277 -177 -1277 125 17 -1277 -1277 173 -1277 -1277 -181 161 -1277 40 113 -1277 -125 87 -1277 100 -225 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 70 E= 1.3e-012 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.657143 0.000000 0.342857 0.000000 0.057143 0.000000 0.714286 0.228571 0.000000 0.000000 1.000000 0.000000 0.000000 0.085714 0.914286 0.000000 0.257143 0.657143 0.000000 0.085714 0.357143 0.000000 0.600000 0.042857 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGRGGGCR MEME-3 regular expression -------------------------------------------------------------------------------- AG[AG][GT]GG[CA][GA] -------------------------------------------------------------------------------- Time 11.23 secs. ******************************************************************************** ******************************************************************************** MOTIF AGAAATAA MEME-4 width = 8 sites = 2 llr = 25 E-value = 1.2e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 Description -------------------------------------------------------------------------------- Simplified A a:aaa:aa pos.-specific C :::::::: probability G :a:::::: matrix T :::::a:: bits 2.4 * ****** 2.1 * ****** 1.9 * ****** 1.7 ******** Relative 1.4 ******** Entropy 1.2 ******** (18.2 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel AGAAATAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:125391451-12539153 65 3.35e-06 CTCTTCCGGC AGAAATAA ATACTGCA chr9:90788454-90788534 52 3.35e-06 GGGGCATCTG AGAAATAA GCAGAAATTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:125391451-12539153 3.3e-06 64_[+4]_8 chr9:90788454-90788534 3.3e-06 51_[+4]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGAAATAA width=8 seqs=2 chr12:125391451-12539153 ( 65) AGAAATAA 1 chr9:90788454-90788534 ( 52) AGAAATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 1.2e+004 235 -765 -765 -765 -765 -765 173 -765 235 -765 -765 -765 235 -765 -765 -765 235 -765 -765 -765 -765 -765 -765 229 235 -765 -765 -765 235 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.2e+004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAATAA MEME-4 regular expression -------------------------------------------------------------------------------- AGAAATAA -------------------------------------------------------------------------------- Time 14.25 secs. ******************************************************************************** ******************************************************************************** MOTIF AMAGMAAA MEME-5 width = 8 sites = 10 llr = 100 E-value = 1.9e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a3a:4aaa pos.-specific C :6::4::: probability G :1:a1::: matrix T ::::1::: bits 2.4 * * *** 2.1 * * *** 1.9 * * *** 1.7 * ** *** Relative 1.4 * ** *** Entropy 1.2 * ** *** (14.5 bits) 0.9 * ** *** 0.7 **** *** 0.5 **** *** 0.2 ******** 0.0 -------- Multilevel ACAGAAAA consensus A C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:169766040-169766120 38 4.96e-06 TGGGGGCAGC ACAGAAAA CACCTCCAAC chr2:238421574-238421654 16 4.96e-06 CTGTGGGGCA ACAGAAAA CAGAAAACAG chr12:54595246-54595326 8 8.18e-06 CCAGCAA AAAGAAAA ACCTGGTCCT chr2:20155747-20155827 57 1.58e-05 ATGGAGACTG ACAGCAAA GCCTCCAGGG chrX:104166964-104167044 2 1.58e-05 g acagcaaa ctgcatgacc chrX:40433174-40433254 50 1.58e-05 atgggatagc acagcaaa aaggccctcg chr5:179190315-179190395 47 2.08e-05 GCATGAAAGT AAAGCAAA CGTCCTGCAG chrX:108729106-108729186 50 2.93e-05 TCCCACACTG AAAGTAAA GCCAAGGTTG chr7:131229805-131229885 34 4.19e-05 CAGAGGCACA ACAGGAAA GAGCCAGCCA chr19:6048107-6048187 53 4.19e-05 ctgGCTAGGG AGAGAAAA GGTGACCTGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:169766040-169766120 5e-06 37_[+5]_35 chr2:238421574-238421654 5e-06 15_[+5]_57 chr12:54595246-54595326 8.2e-06 7_[+5]_65 chr2:20155747-20155827 1.6e-05 56_[+5]_16 chrX:104166964-104167044 1.6e-05 1_[+5]_71 chrX:40433174-40433254 1.6e-05 49_[+5]_23 chr5:179190315-179190395 2.1e-05 46_[+5]_26 chrX:108729106-108729186 2.9e-05 49_[+5]_23 chr7:131229805-131229885 4.2e-05 33_[+5]_39 chr19:6048107-6048187 4.2e-05 52_[+5]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AMAGMAAA width=8 seqs=10 chr5:169766040-169766120 ( 38) ACAGAAAA 1 chr2:238421574-238421654 ( 16) ACAGAAAA 1 chr12:54595246-54595326 ( 8) AAAGAAAA 1 chr2:20155747-20155827 ( 57) ACAGCAAA 1 chrX:104166964-104167044 ( 2) ACAGCAAA 1 chrX:40433174-40433254 ( 50) ACAGCAAA 1 chr5:179190315-179190395 ( 47) AAAGCAAA 1 chrX:108729106-108729186 ( 50) AAAGTAAA 1 chr7:131229805-131229885 ( 34) ACAGGAAA 1 chr19:6048107-6048187 ( 53) AGAGAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.3073 E= 1.9e+004 236 -997 -997 -997 62 99 -158 -997 236 -997 -997 -997 -997 -997 173 -997 103 41 -158 -102 236 -997 -997 -997 236 -997 -997 -997 236 -997 -997 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 1.9e+004 1.000000 0.000000 0.000000 0.000000 0.300000 0.600000 0.100000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.400000 0.100000 0.100000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMAGMAAA MEME-5 regular expression -------------------------------------------------------------------------------- A[CA]AG[AC]AAA -------------------------------------------------------------------------------- Time 17.28 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:39110031-39110111 4.01e-03 80 chr12:130516273-13051635 2.51e-04 15_[+1(2.91e-05)]_27_[+2(2.06e-05)]_\ 22 chr18:42792850-42792930 2.07e-01 80 chr3:184521201-184521281 3.61e-01 80 chr16:8729361-8729441 4.83e-02 61_[+1(5.95e-05)]_11 chr14:69378463-69378543 1.04e-02 80 chr5:43627267-43627347 7.98e-03 65_[+3(6.39e-05)]_7 chrX:132926623-132926703 2.21e-03 22_[+3(2.78e-05)]_50 chr13:40517068-40517148 1.13e-03 43_[+2(2.06e-05)]_29 chr3:51753297-51753377 9.72e-03 11_[+3(4.59e-05)]_61 chr9:34664432-34664512 8.27e-02 80 chrX:9963952-9964032 1.65e-02 80 chr9:97890039-97890119 3.70e-01 80 chr8:81152965-81153045 6.47e-01 80 chr4:146478960-146479040 7.92e-02 25_[+1(5.95e-05)]_47 chr1:8035473-8035553 6.34e-01 80 chr17:78623986-78624066 5.23e-02 22_[+1(5.95e-05)]_50 chr13:100568896-10056897 1.78e-02 20_[+3(4.59e-05)]_41_[+3(7.56e-05)]_\ 3 chr20:11993049-11993129 6.29e-02 80 chr4:16918514-16918594 1.44e-02 80 chr9:131626010-131626090 4.54e-03 80 chr6:148899459-148899539 3.34e-01 80 chr14:106501592-10650167 2.00e-02 48_[+1(5.95e-05)]_24 chr8:29493641-29493721 5.23e-01 80 chr1:120217563-120217643 2.42e-02 80 chr1:24711815-24711895 7.48e-02 80 chr2:223555444-223555524 1.97e-03 17_[+3(2.78e-05)]_55 chr19:13200130-13200210 3.22e-02 80 chr18:11519223-11519303 1.22e-02 45_[+2(2.06e-05)]_27 chr6:109235596-109235676 1.26e-02 80 chr13:30046637-30046717 2.11e-03 80 chr10:98135199-98135279 3.78e-02 63_[+3(9.44e-05)]_9 chr15:70805239-70805319 4.64e-01 80 chr16:57625458-57625538 1.33e-02 80 chr2:48772546-48772626 5.63e-01 80 chr17:49399920-49400000 1.37e-01 80 chr19:42924322-42924402 1.77e-03 80 chr12:53937384-53937464 3.33e-03 80 chr10:134036726-13403680 5.05e-03 27_[+1(7.91e-05)]_45 chr8:27283841-27283921 9.52e-03 63_[+3(4.59e-05)]_9 chr7:133538698-133538778 1.64e-04 53_[+2(2.06e-05)]_19 chr1:200885453-200885533 2.03e-03 17_[+1(2.91e-05)]_55 chr21:47016766-47016846 1.26e-02 11_[+1(2.91e-05)]_61 chr3:31608674-31608754 1.46e-02 80 chr12:107798947-10779902 3.59e-05 18_[+3(4.59e-05)]_28_[+2(5.11e-05)]_\ 18 chr9:90788454-90788534 1.03e-05 15_[+2(8.17e-05)]_28_[+4(3.35e-06)]_\ 21 chr20:25275230-25275310 1.23e-02 25_[+3(6.39e-05)]_47 chr4:140578291-140578371 3.52e-02 80 chr2:190008023-190008103 9.62e-04 80 chr17:37392097-37392177 2.81e-02 58_[+3(2.78e-05)]_14 chr2:210288540-210288620 3.32e-02 80 chr14:25148278-25148358 4.60e-02 20_[+2(5.11e-05)]_52 chrX:152805056-152805136 4.61e-02 80 chr5:176883476-176883556 1.05e-02 80 chr19:6048107-6048187 4.28e-06 52_[+5(4.19e-05)]_10_[+3(6.39e-05)]_\ 2 chrX:38487092-38487172 1.28e-02 21_[+3(4.59e-05)]_51 chr2:238421574-238421654 5.06e-04 15_[+5(4.96e-06)]_57 chr2:42997845-42997925 4.82e-03 80 chr3:51672042-51672122 1.07e-03 16_[+3(6.39e-05)]_56 chr11:131564878-13156495 1.36e-02 19_[+3(4.59e-05)]_53 chr5:169766040-169766120 4.17e-06 37_[+5(4.96e-06)]_27_[+1(7.91e-05)] chr20:1484435-1484515 1.73e-01 80 chr12:111736800-11173688 2.38e-03 80 chr1:66708489-66708569 1.83e-02 5_[+1(5.95e-05)]_67 chr2:15044068-15044148 4.82e-03 11_[+1(2.91e-05)]_61 chr12:119458724-11945880 6.58e-03 17_[+3(2.78e-05)]_55 chr3:46759418-46759498 3.82e-01 80 chr5:179190315-179190395 2.21e-04 46_[+5(2.08e-05)]_26 chr4:148788091-148788171 2.35e-02 9_[+1(5.95e-05)]_63 chr2:44706698-44706778 3.95e-02 80 chr11:36768770-36768850 6.35e-03 80 chr3:164924665-164924745 2.81e-02 16_[+3(9.44e-05)]_56 chr16:88814445-88814525 2.64e-02 68_[+2(2.06e-05)]_4 chr17:72350334-72350414 2.22e-02 54_[+1(5.95e-05)]_18 chrX:40433174-40433254 6.36e-06 49_[+5(1.58e-05)]_23 chr11:120173893-12017397 1.98e-02 80 chr4:57826568-57826648 3.64e-05 10_[+2(5.11e-05)]_52_[+3(6.39e-05)]_\ 2 chr15:79299597-79299677 1.28e-02 51_[+2(5.11e-05)]_21 chr12:262470-262550 4.71e-02 65_[+2(8.17e-05)]_7 chr15:45722597-45722677 1.60e-02 54_[+1(2.91e-05)]_18 chr7:4837849-4837929 2.91e-03 21_[+3(2.78e-05)]_51 chr12:125391451-12539153 2.04e-05 64_[+4(3.35e-06)]_8 chr11:107870647-10787072 2.57e-01 80 chr12:6147417-6147497 7.59e-02 80 chr5:61064688-61064768 1.77e-02 80 chr16:84992800-84992880 4.71e-03 44_[+1(2.91e-05)]_28 chr14:96567052-96567132 1.56e-01 80 chr12:29470861-29470941 1.25e-03 20_[+3(7.56e-05)]_52 chr2:78900306-78900386 7.51e-03 [+3(4.59e-05)]_72 chr19:36542300-36542380 1.05e-01 80 chr10:88109394-88109474 1.19e-04 72_[+4(2.43e-05)] chr17:75210921-75211001 1.65e-02 18_[+2(2.06e-05)]_54 chr15:30218175-30218255 8.21e-02 80 chr11:62092526-62092606 9.71e-02 80 chr22:43263889-43263969 7.39e-02 80 chr11:111299925-11130000 2.42e-03 80 chr1:201192142-201192222 2.51e-01 80 chr11:6272496-6272576 2.55e-02 80 chr12:49947439-49947519 6.44e-03 80 chrX:152665688-152665768 6.18e-03 80 chr12:54595246-54595326 9.46e-06 7_[+5(8.18e-06)]_65 chr19:50982508-50982588 5.08e-02 80 chr7:4035016-4035096 8.01e-01 80 chr9:36008921-36009001 7.26e-02 80 chr10:118976264-11897634 4.94e-02 80 chr3:127174539-127174619 1.01e-01 80 chr4:48965229-48965309 2.22e-03 4_[+1(5.95e-05)]_68 chr14:106986566-10698664 7.59e-02 5_[+2(5.11e-05)]_67 chr8:127888986-127889066 3.31e-01 80 chr4:83660612-83660692 1.15e-01 80 chr2:72364754-72364834 1.33e-03 16_[+2(5.11e-05)]_45_[+3(4.59e-05)]_\ 3 chr15:90442030-90442110 2.62e-01 80 chr16:28519529-28519609 3.01e-01 80 chr4:82297052-82297132 2.33e-01 80 chr17:46755908-46755988 5.03e-01 80 chr3:139072926-139073006 2.00e-02 80 chr22:41973035-41973115 1.66e-04 4_[+4(2.43e-05)]_68 chr8:86133000-86133080 1.78e-01 80 chrX:73770296-73770376 6.93e-03 10_[+1(5.95e-05)]_62 chr11:67415740-67415820 1.28e-01 80 chr19:56821091-56821171 2.46e-02 10_[+2(5.11e-05)]_62 chr11:60253536-60253616 8.75e-01 80 chr16:48387637-48387717 1.17e-03 17_[+3(2.78e-05)]_55 chr15:74913561-74913641 6.33e-02 52_[+2(2.06e-05)]_20 chr17:19266320-19266400 1.27e-01 80 chr17:4443661-4443741 1.37e-02 46_[+2(8.17e-05)]_26 chr22:32774812-32774892 1.15e-03 80 chr9:138304567-138304647 7.92e-03 12_[+1(5.95e-05)]_60 chr19:4804062-4804142 8.43e-03 4_[+2(2.06e-05)]_68 chr2:17081818-17081898 2.99e-03 22_[+1(2.91e-05)]_29_[+1(2.91e-05)]_\ 13 chr15:64973765-64973845 1.49e-01 80 chr14:69255770-69255850 2.79e-03 52_[+2(2.06e-05)]_20 chr18:9792718-9792798 3.37e-03 80 chr16:23446892-23446972 6.60e-02 80 chr9:95397115-95397195 2.26e-04 18_[+1(2.91e-05)]_26_[+2(2.06e-05)]_\ 20 chr9:98980590-98980670 1.37e-01 21_[+2(8.17e-05)]_51 chr1:204593292-204593372 7.49e-03 5_[+1(5.95e-05)]_67 chr13:28107383-28107463 1.31e-02 19_[+3(2.78e-05)]_53 chr1:19233687-19233767 1.69e-01 80 chr20:36569914-36569994 3.45e-03 6_[+1(7.91e-05)]_8_[+3(2.78e-05)]_\ 50 chr19:15695603-15695683 8.89e-03 80 chr10:7729364-7729444 7.83e-02 80 chr17:42160979-42161059 6.14e-03 40_[+1(2.91e-05)]_21_[+2(8.17e-05)]_\ 3 chr7:131229805-131229885 9.92e-04 33_[+5(4.19e-05)]_39 chr9:136608253-136608333 2.87e-01 80 chr17:61045960-61046040 3.79e-02 66_[+2(8.17e-05)]_6 chr20:33894911-33894991 1.54e-02 80 chr2:135208563-135208643 6.37e-03 10_[+2(5.11e-05)]_62 chrX:108729106-108729186 5.18e-04 21_[+2(2.06e-05)]_20_[+5(2.93e-05)]_\ 23 chr9:134731618-134731698 9.64e-02 80 chrX:12789729-12789809 1.99e-04 33_[+2(5.11e-05)]_39 chr1:155176788-155176868 6.29e-03 80 chr8:20233854-20233934 8.77e-04 69_[+2(8.17e-05)]_3 chr12:104026493-10402657 6.92e-04 63_[+2(5.11e-05)]_9 chr6:152085569-152085649 2.26e-01 80 chr14:90866028-90866108 1.60e-01 80 chr1:86965841-86965921 2.23e-02 80 chr3:73143344-73143424 1.64e-01 80 chr22:47826629-47826709 4.83e-03 80 chr6:29040038-29040118 4.05e-01 80 chr10:106051314-10605139 1.84e-01 80 chr9:71199492-71199572 2.24e-02 17_[+3(2.78e-05)]_55 chr21:43801659-43801739 9.77e-03 80 chrX:100023870-100023950 2.26e-01 80 chr13:112051235-11205131 9.54e-02 17_[+2(5.11e-05)]_44_[+2(2.06e-05)]_\ 3 chr3:52035629-52035709 1.86e-01 80 chrX:104166964-104167044 4.83e-04 1_[+5(1.58e-05)]_71 chr16:68544220-68544300 3.60e-03 28_[+1(2.91e-05)]_44 chr8:41815469-41815549 6.68e-02 80 chr16:24528455-24528535 2.01e-02 80 chr1:44760545-44760625 4.50e-03 24_[+2(2.06e-05)]_48 chr3:52419342-52419422 8.54e-03 69_[+1(5.95e-05)]_3 chr17:34131874-34131954 2.90e-02 54_[+1(5.95e-05)]_18 chr12:110348859-11034893 1.39e-03 25_[+1(2.91e-05)]_47 chr1:54535899-54535979 7.80e-03 80 chr10:5671965-5672045 1.27e-02 80 chr8:140353259-140353339 1.02e-01 80 chr12:119882398-11988247 2.32e-03 80 chr2:28789768-28789848 9.75e-03 1_[+1(2.91e-05)]_71 chr11:9142650-9142730 3.05e-03 25_[+2(8.17e-05)]_47 chr2:11568-11648 2.10e-02 33_[+2(5.11e-05)]_39 chr15:27262509-27262589 6.73e-02 80 chr12:31399183-31399263 1.47e-02 80 chr11:59961243-59961323 2.10e-01 80 chr7:148224858-148224938 2.61e-02 27_[+1(5.95e-05)]_45 chr19:50073559-50073639 9.06e-02 80 chr11:6319969-6320049 3.66e-02 4_[+2(5.11e-05)]_68 chr7:149015286-149015366 7.41e-03 [+2(5.11e-05)]_72 chr16:48151557-48151637 2.18e-01 80 chr15:74257204-74257284 4.42e-02 80 chr16:74743450-74743530 5.92e-04 50_[+3(4.59e-05)]_22 chr12:14607186-14607266 4.59e-01 80 chr9:34675208-34675288 8.77e-04 4_[+1(2.91e-05)]_68 chr8:10786088-10786168 5.82e-01 80 chr1:7727755-7727835 1.13e-01 80 chr8:139739784-139739864 7.29e-04 16_[+3(2.78e-05)]_56 chr15:74420003-74420083 2.18e-02 80 chr18:60251685-60251765 1.54e-02 80 chr1:203840321-203840401 2.25e-04 17_[+3(6.39e-05)]_24_[+1(5.95e-05)]_\ 23 chr20:44221374-44221454 9.89e-03 80 chr5:149217413-149217493 8.42e-02 80 chrX:155196687-155196767 2.33e-02 80 chr16:8223262-8223342 1.41e-02 80 chr1:181394186-181394266 2.11e-02 80 chr19:4677266-4677346 3.22e-02 64_[+2(8.17e-05)]_8 chr13:46700862-46700942 9.03e-01 80 chr1:224922411-224922491 2.99e-03 80 chr20:412220-412300 1.44e-02 2_[+3(2.78e-05)]_70 chr12:54140551-54140631 4.96e-01 80 chr7:91808336-91808416 4.61e-02 80 chr3:119540003-119540083 3.48e-03 80 chr22:37252530-37252610 1.18e-02 80 chr7:22599625-22599705 3.68e-02 13_[+3(4.59e-05)]_59 chr16:27190969-27191049 3.97e-02 80 chr11:76802353-76802433 2.49e-02 80 chr6:164768661-164768741 4.19e-03 80 chr2:20155747-20155827 4.35e-03 56_[+5(1.58e-05)]_16 chr16:11626148-11626228 1.04e-05 80 chr5:179095545-179095625 1.55e-01 29_[+2(8.17e-05)]_43 chr19:46580956-46581036 4.99e-02 80 chr3:48477532-48477612 6.22e-02 80 chr11:2952116-2952196 2.93e-01 71_[+2(8.17e-05)]_1 chr6:33600450-33600530 9.48e-02 80 chrX:138208827-138208907 5.66e-05 19_[+3(6.39e-05)]_53 chr8:57154649-57154729 1.66e-01 80 chr14:22568645-22568725 1.47e-01 80 chr13:20534389-20534469 2.55e-01 80 chr3:115538779-115538859 1.12e-01 80 chr1:34098785-34098865 7.56e-02 80 chr18:45275646-45275726 1.62e-01 80 chr9:7234291-7234371 3.06e-01 80 chr18:68101275-68101355 8.04e-04 80 chr1:118385644-118385724 2.03e-01 80 chr4:152722881-152722961 8.12e-03 19_[+3(9.44e-05)]_53 chr20:31683898-31683978 2.25e-01 80 chr11:5621665-5621745 1.26e-03 80 chr17:47485492-47485572 7.03e-04 40_[+3(6.39e-05)]_32 chr3:126108243-126108323 1.00e+00 80 chr5:145770202-145770282 2.64e-02 80 chr3:113874397-113874477 1.46e-03 23_[+2(5.11e-05)]_49 chr14:21560786-21560866 7.43e-02 80 chr16:28102404-28102484 4.94e-02 80 chrX:64815426-64815506 2.18e-01 80 chr12:26587409-26587489 3.90e-02 80 chrX:153212910-153212990 5.77e-02 80 chr10:102321895-10232197 9.39e-01 80 chr15:90514919-90514999 7.71e-02 80 chr7:101151219-101151299 1.18e-04 63_[+2(5.11e-05)]_9 chr13:112157646-11215772 1.22e-01 54_[+2(8.17e-05)]_18 chr14:107147764-10714784 1.04e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************