******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/CREB3L1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr12:3792998-3793078 1.0000 80 chr19:7197637-7197717 1.0000 80 chr9:108301876-108301956 1.0000 80 chr1:230031414-230031494 1.0000 80 chr16:2812458-2812538 1.0000 80 chr11:75275252-75275332 1.0000 80 chr5:131563638-131563718 1.0000 80 chr4:119757209-119757289 1.0000 80 chr19:3590994-3591074 1.0000 80 chr2:238551174-238551254 1.0000 80 chr5:108745796-108745876 1.0000 80 chr7:97762586-97762666 1.0000 80 chr11:62341673-62341753 1.0000 80 chr3:128195661-128195741 1.0000 80 chr17:18684538-18684618 1.0000 80 chr16:55787143-55787223 1.0000 80 chr2:27255753-27255833 1.0000 80 chr12:117080650-11708073 1.0000 80 chr7:6523728-6523808 1.0000 80 chr14:93260600-93260680 1.0000 80 chr7:106648420-106648500 1.0000 80 chr2:220363557-220363637 1.0000 80 chr19:7197853-7197933 1.0000 80 chr12:6938584-6938664 1.0000 80 chr19:42722112-42722192 1.0000 80 chr19:49471598-49471678 1.0000 80 chr1:156093523-156093603 1.0000 80 chr3:122920683-122920763 1.0000 80 chr4:7755832-7755912 1.0000 80 chr3:128968432-128968512 1.0000 80 chr16:27246711-27246791 1.0000 80 chr13:100150807-10015088 1.0000 80 chrX:54466695-54466775 1.0000 80 chr2:71357270-71357350 1.0000 80 chr16:74402204-74402284 1.0000 80 chr20:35402420-35402500 1.0000 80 chr1:230297183-230297263 1.0000 80 chr18:55454651-55454731 1.0000 80 chr21:45139173-45139253 1.0000 80 chr12:46777749-46777829 1.0000 80 chr2:68589298-68589378 1.0000 80 chr1:22029347-22029427 1.0000 80 chr3:100120391-100120471 1.0000 80 chr1:142618904-142618984 1.0000 80 chr8:61429903-61429983 1.0000 80 chr22:38864030-38864110 1.0000 80 chr12:14518994-14519074 1.0000 80 chr5:143550141-143550221 1.0000 80 chr3:43728268-43728348 1.0000 80 chr4:56261725-56261805 1.0000 80 chr7:66656108-66656188 1.0000 80 chr19:50031056-50031136 1.0000 80 chr6:90062644-90062724 1.0000 80 chr12:107349648-10734972 1.0000 80 chrX:119737835-119737915 1.0000 80 chr1:46712693-46712773 1.0000 80 chr1:46770424-46770504 1.0000 80 chr6:50993053-50993133 1.0000 80 chr10:18948129-18948209 1.0000 80 chr20:30135033-30135113 1.0000 80 chr11:118758629-11875870 1.0000 80 chr6:36087112-36087192 1.0000 80 chr16:68298294-68298374 1.0000 80 chr7:130626370-130626450 1.0000 80 chr1:153950100-153950180 1.0000 80 chr10:102820984-10282106 1.0000 80 chr17:14212395-14212475 1.0000 80 chrX:149106777-149106857 1.0000 80 chr19:50353997-50354077 1.0000 80 chr19:38943517-38943597 1.0000 80 chr12:108297592-10829767 1.0000 80 chr3:47422101-47422181 1.0000 80 chrX:49020141-49020221 1.0000 80 chr12:132345416-13234549 1.0000 80 chr3:100428308-100428388 1.0000 80 chr3:156271899-156271979 1.0000 80 chr1:31535795-31535875 1.0000 80 chr12:112074396-11207447 1.0000 80 chr11:118443200-11844328 1.0000 80 chr6:21981634-21981714 1.0000 80 chr19:42463511-42463591 1.0000 80 chr9:37079524-37079604 1.0000 80 chr3:119217198-119217278 1.0000 80 chr19:46271711-46271791 1.0000 80 chr17:27899983-27900063 1.0000 80 chrX:154564085-154564165 1.0000 80 chr7:16793054-16793134 1.0000 80 chr16:15068954-15069034 1.0000 80 chr6:83902908-83902988 1.0000 80 chr22:46516185-46516265 1.0000 80 chr17:42856631-42856711 1.0000 80 chr1:184740443-184740523 1.0000 80 chr1:47647779-47647859 1.0000 80 chr19:47985069-47985149 1.0000 80 chr1:228270380-228270460 1.0000 80 chr17:4843537-4843617 1.0000 80 chr15:52313536-52313616 1.0000 80 chr7:107204058-107204138 1.0000 80 chr5:10761267-10761347 1.0000 80 chr7:50423919-50423999 1.0000 80 chr9:136242924-136243004 1.0000 80 chr20:61904140-61904220 1.0000 80 chr9:107510251-107510331 1.0000 80 chr16:22385858-22385938 1.0000 80 chrX:102942071-102942151 1.0000 80 chr17:38975221-38975301 1.0000 80 chr3:57583103-57583183 1.0000 80 chr16:85450073-85450153 1.0000 80 chr5:150138134-150138214 1.0000 80 chr2:69614722-69614802 1.0000 80 chr1:70017538-70017618 1.0000 80 chr2:208490072-208490152 1.0000 80 chr1:156556949-156557029 1.0000 80 chr11:14521367-14521447 1.0000 80 chr1:224180443-224180523 1.0000 80 chr10:81918513-81918593 1.0000 80 chr2:69614517-69614597 1.0000 80 chr16:84512423-84512503 1.0000 80 chr3:47029024-47029104 1.0000 80 chr3:122785786-122785866 1.0000 80 chr5:89825363-89825443 1.0000 80 chr5:108084595-108084675 1.0000 80 chr22:38430378-38430458 1.0000 80 chr4:119756371-119756451 1.0000 80 chr6:33168623-33168703 1.0000 80 chr16:55787354-55787434 1.0000 80 chr16:58468408-58468488 1.0000 80 chr5:139017876-139017956 1.0000 80 chr1:150208860-150208940 1.0000 80 chr17:77776489-77776569 1.0000 80 chr12:99038763-99038843 1.0000 80 chr19:45682947-45683027 1.0000 80 chr3:49761416-49761496 1.0000 80 chr19:51894079-51894159 1.0000 80 chr19:58361140-58361220 1.0000 80 chr2:158114349-158114429 1.0000 80 chr3:49131513-49131593 1.0000 80 chr7:148269196-148269276 1.0000 80 chr11:13484826-13484906 1.0000 80 chr17:15466677-15466757 1.0000 80 chr17:72956995-72957075 1.0000 80 chr5:177019132-177019212 1.0000 80 chr20:45313055-45313135 1.0000 80 chr14:31889890-31889970 1.0000 80 chr11:65292762-65292842 1.0000 80 chr1:12235419-12235499 1.0000 80 chr13:38923879-38923959 1.0000 80 chr4:39529359-39529439 1.0000 80 chr13:73356185-73356265 1.0000 80 chr19:18393254-18393334 1.0000 80 chr16:70148030-70148110 1.0000 80 chr15:76135413-76135493 1.0000 80 chr8:128747748-128747828 1.0000 80 chr11:66056873-66056953 1.0000 80 chr7:16460466-16460546 1.0000 80 chr21:38445567-38445647 1.0000 80 chr4:2263088-2263168 1.0000 80 chr3:171783403-171783483 1.0000 80 chr16:8159678-8159758 1.0000 80 chr6:15090076-15090156 1.0000 80 chr6:33168829-33168909 1.0000 80 chr15:79603526-79603606 1.0000 80 chr6:8435713-8435793 1.0000 80 chr13:46038964-46039044 1.0000 80 chr9:88555871-88555951 1.0000 80 chr12:21654727-21654807 1.0000 80 chr13:41768616-41768696 1.0000 80 chr3:194403684-194403764 1.0000 80 chr9:140269932-140270012 1.0000 80 chr17:74639682-74639762 1.0000 80 chr17:7760844-7760924 1.0000 80 chr16:11348822-11348902 1.0000 80 chr2:33824517-33824597 1.0000 80 chr17:46657581-46657661 1.0000 80 chr4:140374948-140375028 1.0000 80 chr19:56151548-56151628 1.0000 80 chr8:112052815-112052895 1.0000 80 chr19:17446629-17446709 1.0000 80 chr14:96709626-96709706 1.0000 80 chr19:7702671-7702751 1.0000 80 chr9:35732420-35732500 1.0000 80 chr8:27220302-27220382 1.0000 80 chr17:53046016-53046096 1.0000 80 chr11:6502546-6502626 1.0000 80 chr20:60101084-60101164 1.0000 80 chr12:7592711-7592791 1.0000 80 chr1:110162318-110162398 1.0000 80 chr12:121124295-12112437 1.0000 80 chr3:183851931-183852011 1.0000 80 chr9:6681681-6681761 1.0000 80 chr6:4371795-4371875 1.0000 80 chr5:114961783-114961863 1.0000 80 chr17:60247817-60247897 1.0000 80 chr12:10766123-10766203 1.0000 80 chr16:14580463-14580543 1.0000 80 chr1:230263554-230263634 1.0000 80 chr17:4167235-4167315 1.0000 80 chr19:4124131-4124211 1.0000 80 chr15:101137074-10113715 1.0000 80 chr8:22808325-22808405 1.0000 80 chrX:12968446-12968526 1.0000 80 chr20:33872625-33872705 1.0000 80 chr22:29168735-29168815 1.0000 80 chr19:48894144-48894224 1.0000 80 chr3:136471448-136471528 1.0000 80 chr22:20199633-20199713 1.0000 80 chr4:57333565-57333645 1.0000 80 chr3:139108446-139108526 1.0000 80 chrX:47518010-47518090 1.0000 80 chr2:54014222-54014302 1.0000 80 chr3:128968634-128968714 1.0000 80 chr6:44355226-44355306 1.0000 80 chr7:138794357-138794437 1.0000 80 chr6:121655881-121655961 1.0000 80 chr4:76649775-76649855 1.0000 80 chr13:33049733-33049813 1.0000 80 chr12:124068951-12406903 1.0000 80 chr12:53473341-53473421 1.0000 80 chr19:45927107-45927187 1.0000 80 chr11:62599429-62599509 1.0000 80 chr8:143719807-143719887 1.0000 80 chr16:70462633-70462713 1.0000 80 chrX:53711232-53711312 1.0000 80 chr17:73839988-73840068 1.0000 80 chr5:133984327-133984407 1.0000 80 chr11:59383541-59383621 1.0000 80 chr10:51565103-51565183 1.0000 80 chr2:70056676-70056756 1.0000 80 chr16:3332913-3332993 1.0000 80 chr7:25990690-25990770 1.0000 80 chr9:101984291-101984371 1.0000 80 chr5:54081613-54081693 1.0000 80 chr14:31091473-31091553 1.0000 80 chr11:207307-207387 1.0000 80 chr2:74007232-74007312 1.0000 80 chr2:71295452-71295532 1.0000 80 chr16:11891177-11891257 1.0000 80 chr6:6970253-6970333 1.0000 80 chr3:12909905-12909985 1.0000 80 chr5:82373097-82373177 1.0000 80 chr6:88182474-88182554 1.0000 80 chr7:5635843-5635923 1.0000 80 chr1:3817809-3817889 1.0000 80 chr2:65215535-65215615 1.0000 80 chr2:204103725-204103805 1.0000 80 chr7:106005812-106005892 1.0000 80 chr7:116594338-116594418 1.0000 80 chr2:179343218-179343298 1.0000 80 chr11:2721247-2721327 1.0000 80 chrX:48433036-48433116 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_CREB3L1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/CREB3L1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.19 C 0.316 G 0.306 T 0.189 Background letter frequencies (from file dataset with add-one prior applied): A 0.19 C 0.315 G 0.306 T 0.189 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF ACGTGGCW MEME-1 width = 8 sites = 78 llr = 674 E-value = 5.6e-062 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 Description -------------------------------------------------------------------------------- Simplified A a:::::14 pos.-specific C :a::::82 probability G ::a:a912 matrix T :::a:1:2 bits 2.4 * * 2.2 * * 1.9 * * 1.7 ***** Relative 1.4 ****** Entropy 1.2 ****** (12.5 bits) 1.0 ******* 0.7 ******* 0.5 ******* 0.2 ******** 0.0 -------- Multilevel ACGTGGCA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:65215535-65215615 2 1.94e-05 T ACGTGGCA GAAACCAACT chr6:6970253-6970333 57 1.94e-05 CTCACAGCCT ACGTGGCA GCCACATGTT chr12:53473341-53473421 33 1.94e-05 AGCGAAGGCG ACGTGGCA GCGCGGACGC chr12:124068951-12406903 53 1.94e-05 GCCTCCCTTT ACGTGGCA GCTGCGGGAG chr1:230263554-230263634 51 1.94e-05 GGTATTGCTG ACGTGGCA TGTAAGATGG chr16:14580463-14580543 47 1.94e-05 GCTGGCCTCC ACGTGGCA ATAATTTACC chr6:15090076-15090156 38 1.94e-05 AGAAGTGGCC ACGTGGCA CCCACGGCTC chr3:171783403-171783483 39 1.94e-05 TGCATTAGCA ACGTGGCA GTTACTGATC chr16:70148030-70148110 47 1.94e-05 AAACAAGCCC ACGTGGCA GGGGCGGGGC chr20:45313055-45313135 53 1.94e-05 acccttctcc acgtggca gcaggaagtg chr17:72956995-72957075 20 1.94e-05 CAACTCTGCC ACGTGGCA CGTGTGACAC chr3:49761416-49761496 26 1.94e-05 GCTGCCGCGT ACGTGGCA CGGCCGCCGG chr2:69614517-69614597 17 1.94e-05 GGCGGCGGCG ACGTGGCA GTGGCTCGTG chr10:81918513-81918593 27 1.94e-05 TTTAGAGGAA ACGTGGCA GGATATGAGT chr16:22385858-22385938 66 1.94e-05 GCCGGGCCCA ACGTGGCA CTTTGGC chr9:37079524-37079604 32 1.94e-05 GCTCCCCGCC ACGTGGCA CTGGGAAGGC chrX:49020141-49020221 70 1.94e-05 GCTGCGGTCG ACGTGGCA GCG chr7:130626370-130626450 34 1.94e-05 TCTGGGTGCC ACGTGGCA CCTCCACTGT chr1:46712693-46712773 15 1.94e-05 CGAGCCCGCC ACGTGGCA GTCTGGGCCG chr6:90062644-90062724 23 1.94e-05 AGTTGCCCTG ACGTGGCA GTAGCTTCGT chr2:68589298-68589378 31 1.94e-05 GCGCGATGAC ACGTGGCA GGAGGGGGAG chr1:230297183-230297263 29 1.94e-05 GTCTGTGCAG ACGTGGCA AAGAAATATG chr2:27255753-27255833 57 1.94e-05 CTGCGAGGAG ACGTGGCA GAGTGCGGCG chr5:108745796-108745876 67 1.94e-05 AATGGTTGGG ACGTGGCA GAAAAA chr2:204103725-204103805 36 3.87e-05 CCGATCCGAG ACGTGGCT CCCTGGGCGG chr3:12909905-12909985 70 3.87e-05 tccagtggac acgtggct tac chr13:33049733-33049813 26 3.87e-05 ctttctgtac acgtggct gacaaacaga chr22:20199633-20199713 41 3.87e-05 TCCCACTGCC ACGTGGCT GCCTGGCGCA chr6:4371795-4371875 46 3.87e-05 ccattgcact acgtggct ctttgTGGCT chr20:60101084-60101164 54 3.87e-05 AGTAATGACA ACGTGGCT AGTACATGGG chr19:7702671-7702751 40 3.87e-05 GACACAGTGG ACGTGGCT GGGCGGGGCC chr16:8159678-8159758 19 3.87e-05 tttattgtac acgtggct gacaaagaga chr5:139017876-139017956 65 3.87e-05 GGAAGTGCTG ACGTGGCT CTGGGCAG chr1:70017538-70017618 30 3.87e-05 cttactgtac acgtggct ggccaagaga chr15:52313536-52313616 16 3.87e-05 ACGGACTGCT ACGTGGCt tttttttttt chr22:46516185-46516265 17 3.87e-05 gcgattgctg acgtggct gcagtccccc chr12:112074396-11207447 54 3.87e-05 GGGGAGTGCC ACGTGGCT CCTCTCTTGC chr3:156271899-156271979 51 3.87e-05 TTCCTTGCTG ACGTGGCT GTTATCAGAA chr12:46777749-46777829 33 3.87e-05 GCGCTTGTGT ACGTGGCT GCTGACGTGG chr16:27246711-27246791 62 3.87e-05 CGCCAATGCC ACGTGGCT TCTTTCTTCC chr12:6938584-6938664 31 3.87e-05 GCAGTTGCCT ACGTGGCT GGGGAAGCGG chr17:18684538-18684618 32 3.87e-05 TGCTGCGCTG ACGTGGCT CCCGGAAGTA chr11:2721247-2721327 22 6.99e-05 GCCGCTGCCG ACGTGGCG ACCGCCCCCC chr11:207307-207387 70 6.99e-05 GCCGCCTCAG ACGTGGCG CAG chr8:143719807-143719887 46 6.99e-05 CCGGGAGAGA ACGTGGCG CCGGAAACGG chr1:110162318-110162398 65 6.99e-05 GTGGCTGCCC ACGTGGCG CCCAGGAA chr4:140374948-140375028 40 6.99e-05 GGAACCTTGG ACGTGGCG GGGCTGGGTC chr12:21654727-21654807 24 6.99e-05 TTTCCGGAAG ACGTGGCG GCTCTCGCCT chr11:65292762-65292842 61 6.99e-05 GCCCGGCCTG ACGTGGCG GCGGAACCAA chr5:177019132-177019212 41 6.99e-05 CGGCAGGGCG ACGTGGCG CGGCCGGCTG chr22:38430378-38430458 24 6.99e-05 cttcctggcc acgtggcg gcaggcaggt chr19:42463511-42463591 28 6.99e-05 AGCGGAGTCG ACGTGGCG CAGCCCCGGA chr19:50031056-50031136 66 6.99e-05 TCCTTTGTGG ACGTGGCG AGGAGTG chr15:76135413-76135493 20 1.02e-04 AGCGGCGCCG ACGTGGCC GGCGCGATCC chr19:45682947-45683027 20 1.02e-04 GCAGGCCGCG ACGTGGCC GCCCTGGCTA chrX:102942071-102942151 36 1.02e-04 GGAAGTGTCT ACGTGGCC TGCGGAAATA chr1:228270380-228270460 15 1.02e-04 GGAGGCGCTG ACGTGGCC GCCGTCAGAG chr3:128968432-128968512 9 1.02e-04 GCTGGGCG ACGTGGCC AGTCGGGGCC chr7:6523728-6523808 69 1.02e-04 ATCGCCCGCG ACGTGGCC AGGG chr16:2812458-2812538 66 1.02e-04 CCCCAGCCAG ACGTGGCC GCTCACG chr3:139108446-139108526 41 1.14e-04 AGACTGACTG ACGTGGAA CTTCCGGGAG chr8:22808325-22808405 24 1.14e-04 cttactgtac acgtggaa gtaaggagtg chr5:114961783-114961863 41 1.14e-04 TGGAGTGCGT ACGTGGAA GCCCGCGAGG chr3:183851931-183852011 33 1.14e-04 CGGAATCGCC ACGTGGAA ACAGCTCTCA chr11:14521367-14521447 33 1.14e-04 TCCTTGGCTG ACGTGGAA GGGGGTGGGG chr7:116594338-116594418 57 1.56e-04 TGTATGGATG ACGTGTCA GGTCACCAAA chr16:85450073-85450153 48 1.56e-04 AGCCCCTGCC ACGTGGGA TGCGGTGTGC chr3:47422101-47422181 64 1.56e-04 TCTTGACAAT ACGTGGGA GGGCAAGTT chr5:143550141-143550221 54 1.56e-04 CCCCGTTGCT ACGTGTCA CAGGGCCAAA chr21:38445567-38445647 12 1.75e-04 CCGTCGGCTG ACGTGGAG GGCcggaggt chrX:119737835-119737915 55 1.75e-04 AAAAGCGCCT ACGTGGAG TCCAGAGGAG chr17:27899983-27900063 24 2.25e-04 GACCTCTGCC ACGTGGAC CGCGCGCGGG chrX:12968446-12968526 28 2.87e-04 CGTTtctgtc acgtgaca gctgtggggt chr12:10766123-10766203 44 3.38e-04 AACGCAGCCA ACGTGTCC CCCGGCGCCT chr17:14212395-14212475 14 3.38e-04 CGACGTTGCC ACGTGTCC GCTCCTTTCG chr8:61429903-61429983 61 3.38e-04 GGAGCTGGTG ACGTGGGC ACTGCGAGCG chr21:45139173-45139253 55 3.38e-04 ATCCGCGGCT ACGTGGGC AACCGGGCGG chr16:74402204-74402284 22 3.38e-04 CGCCCCTGCC ACGTGGGC TTGTTTGGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:65215535-65215615 1.9e-05 1_[+1]_71 chr6:6970253-6970333 1.9e-05 56_[+1]_16 chr12:53473341-53473421 1.9e-05 32_[+1]_40 chr12:124068951-12406903 1.9e-05 52_[+1]_20 chr1:230263554-230263634 1.9e-05 50_[+1]_22 chr16:14580463-14580543 1.9e-05 46_[+1]_26 chr6:15090076-15090156 1.9e-05 37_[+1]_35 chr3:171783403-171783483 1.9e-05 38_[+1]_34 chr16:70148030-70148110 1.9e-05 46_[+1]_26 chr20:45313055-45313135 1.9e-05 52_[+1]_20 chr17:72956995-72957075 1.9e-05 19_[+1]_53 chr3:49761416-49761496 1.9e-05 25_[+1]_47 chr2:69614517-69614597 1.9e-05 16_[+1]_56 chr10:81918513-81918593 1.9e-05 26_[+1]_46 chr16:22385858-22385938 1.9e-05 65_[+1]_7 chr9:37079524-37079604 1.9e-05 31_[+1]_41 chrX:49020141-49020221 1.9e-05 69_[+1]_3 chr7:130626370-130626450 1.9e-05 33_[+1]_39 chr1:46712693-46712773 1.9e-05 14_[+1]_58 chr6:90062644-90062724 1.9e-05 22_[+1]_50 chr2:68589298-68589378 1.9e-05 30_[+1]_42 chr1:230297183-230297263 1.9e-05 28_[+1]_44 chr2:27255753-27255833 1.9e-05 56_[+1]_16 chr5:108745796-108745876 1.9e-05 66_[+1]_6 chr2:204103725-204103805 3.9e-05 35_[+1]_37 chr3:12909905-12909985 3.9e-05 69_[+1]_3 chr13:33049733-33049813 3.9e-05 25_[+1]_47 chr22:20199633-20199713 3.9e-05 40_[+1]_32 chr6:4371795-4371875 3.9e-05 45_[+1]_27 chr20:60101084-60101164 3.9e-05 53_[+1]_19 chr19:7702671-7702751 3.9e-05 39_[+1]_33 chr16:8159678-8159758 3.9e-05 18_[+1]_54 chr5:139017876-139017956 3.9e-05 64_[+1]_8 chr1:70017538-70017618 3.9e-05 29_[+1]_43 chr15:52313536-52313616 3.9e-05 15_[+1]_57 chr22:46516185-46516265 3.9e-05 16_[+1]_56 chr12:112074396-11207447 3.9e-05 53_[+1]_19 chr3:156271899-156271979 3.9e-05 50_[+1]_22 chr12:46777749-46777829 3.9e-05 32_[+1]_40 chr16:27246711-27246791 3.9e-05 61_[+1]_11 chr12:6938584-6938664 3.9e-05 30_[+1]_42 chr17:18684538-18684618 3.9e-05 31_[+1]_41 chr11:2721247-2721327 7e-05 21_[+1]_51 chr11:207307-207387 7e-05 69_[+1]_3 chr8:143719807-143719887 7e-05 45_[+1]_27 chr1:110162318-110162398 7e-05 64_[+1]_8 chr4:140374948-140375028 7e-05 39_[+1]_33 chr12:21654727-21654807 7e-05 23_[+1]_49 chr11:65292762-65292842 7e-05 60_[+1]_12 chr5:177019132-177019212 7e-05 40_[+1]_32 chr22:38430378-38430458 7e-05 23_[+1]_49 chr19:42463511-42463591 7e-05 27_[+1]_45 chr19:50031056-50031136 7e-05 65_[+1]_7 chr15:76135413-76135493 0.0001 19_[+1]_53 chr19:45682947-45683027 0.0001 19_[+1]_53 chrX:102942071-102942151 0.0001 35_[+1]_37 chr1:228270380-228270460 0.0001 14_[+1]_58 chr3:128968432-128968512 0.0001 8_[+1]_64 chr7:6523728-6523808 0.0001 68_[+1]_4 chr16:2812458-2812538 0.0001 65_[+1]_7 chr3:139108446-139108526 0.00011 40_[+1]_32 chr8:22808325-22808405 0.00011 23_[+1]_49 chr5:114961783-114961863 0.00011 40_[+1]_32 chr3:183851931-183852011 0.00011 32_[+1]_40 chr11:14521367-14521447 0.00011 32_[+1]_40 chr7:116594338-116594418 0.00016 56_[+1]_16 chr16:85450073-85450153 0.00016 47_[+1]_25 chr3:47422101-47422181 0.00016 63_[+1]_9 chr5:143550141-143550221 0.00016 53_[+1]_19 chr21:38445567-38445647 0.00018 11_[+1]_61 chrX:119737835-119737915 0.00018 54_[+1]_18 chr17:27899983-27900063 0.00023 23_[+1]_49 chrX:12968446-12968526 0.00029 27_[+1]_45 chr12:10766123-10766203 0.00034 43_[+1]_29 chr17:14212395-14212475 0.00034 13_[+1]_59 chr8:61429903-61429983 0.00034 60_[+1]_12 chr21:45139173-45139253 0.00034 54_[+1]_18 chr16:74402204-74402284 0.00034 21_[+1]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACGTGGCW width=8 seqs=78 chr2:65215535-65215615 ( 2) ACGTGGCA 1 chr6:6970253-6970333 ( 57) ACGTGGCA 1 chr12:53473341-53473421 ( 33) ACGTGGCA 1 chr12:124068951-12406903 ( 53) ACGTGGCA 1 chr1:230263554-230263634 ( 51) ACGTGGCA 1 chr16:14580463-14580543 ( 47) ACGTGGCA 1 chr6:15090076-15090156 ( 38) ACGTGGCA 1 chr3:171783403-171783483 ( 39) ACGTGGCA 1 chr16:70148030-70148110 ( 47) ACGTGGCA 1 chr20:45313055-45313135 ( 53) ACGTGGCA 1 chr17:72956995-72957075 ( 20) ACGTGGCA 1 chr3:49761416-49761496 ( 26) ACGTGGCA 1 chr2:69614517-69614597 ( 17) ACGTGGCA 1 chr10:81918513-81918593 ( 27) ACGTGGCA 1 chr16:22385858-22385938 ( 66) ACGTGGCA 1 chr9:37079524-37079604 ( 32) ACGTGGCA 1 chrX:49020141-49020221 ( 70) ACGTGGCA 1 chr7:130626370-130626450 ( 34) ACGTGGCA 1 chr1:46712693-46712773 ( 15) ACGTGGCA 1 chr6:90062644-90062724 ( 23) ACGTGGCA 1 chr2:68589298-68589378 ( 31) ACGTGGCA 1 chr1:230297183-230297263 ( 29) ACGTGGCA 1 chr2:27255753-27255833 ( 57) ACGTGGCA 1 chr5:108745796-108745876 ( 67) ACGTGGCA 1 chr2:204103725-204103805 ( 36) ACGTGGCT 1 chr3:12909905-12909985 ( 70) ACGTGGCT 1 chr13:33049733-33049813 ( 26) ACGTGGCT 1 chr22:20199633-20199713 ( 41) ACGTGGCT 1 chr6:4371795-4371875 ( 46) ACGTGGCT 1 chr20:60101084-60101164 ( 54) ACGTGGCT 1 chr19:7702671-7702751 ( 40) ACGTGGCT 1 chr16:8159678-8159758 ( 19) ACGTGGCT 1 chr5:139017876-139017956 ( 65) ACGTGGCT 1 chr1:70017538-70017618 ( 30) ACGTGGCT 1 chr15:52313536-52313616 ( 16) ACGTGGCT 1 chr22:46516185-46516265 ( 17) ACGTGGCT 1 chr12:112074396-11207447 ( 54) ACGTGGCT 1 chr3:156271899-156271979 ( 51) ACGTGGCT 1 chr12:46777749-46777829 ( 33) ACGTGGCT 1 chr16:27246711-27246791 ( 62) ACGTGGCT 1 chr12:6938584-6938664 ( 31) ACGTGGCT 1 chr17:18684538-18684618 ( 32) ACGTGGCT 1 chr11:2721247-2721327 ( 22) ACGTGGCG 1 chr11:207307-207387 ( 70) ACGTGGCG 1 chr8:143719807-143719887 ( 46) ACGTGGCG 1 chr1:110162318-110162398 ( 65) ACGTGGCG 1 chr4:140374948-140375028 ( 40) ACGTGGCG 1 chr12:21654727-21654807 ( 24) ACGTGGCG 1 chr11:65292762-65292842 ( 61) ACGTGGCG 1 chr5:177019132-177019212 ( 41) ACGTGGCG 1 chr22:38430378-38430458 ( 24) ACGTGGCG 1 chr19:42463511-42463591 ( 28) ACGTGGCG 1 chr19:50031056-50031136 ( 66) ACGTGGCG 1 chr15:76135413-76135493 ( 20) ACGTGGCC 1 chr19:45682947-45683027 ( 20) ACGTGGCC 1 chrX:102942071-102942151 ( 36) ACGTGGCC 1 chr1:228270380-228270460 ( 15) ACGTGGCC 1 chr3:128968432-128968512 ( 9) ACGTGGCC 1 chr7:6523728-6523808 ( 69) ACGTGGCC 1 chr16:2812458-2812538 ( 66) ACGTGGCC 1 chr3:139108446-139108526 ( 41) ACGTGGAA 1 chr8:22808325-22808405 ( 24) ACGTGGAA 1 chr5:114961783-114961863 ( 41) ACGTGGAA 1 chr3:183851931-183852011 ( 33) ACGTGGAA 1 chr11:14521367-14521447 ( 33) ACGTGGAA 1 chr7:116594338-116594418 ( 57) ACGTGTCA 1 chr16:85450073-85450153 ( 48) ACGTGGGA 1 chr3:47422101-47422181 ( 64) ACGTGGGA 1 chr5:143550141-143550221 ( 54) ACGTGTCA 1 chr21:38445567-38445647 ( 12) ACGTGGAG 1 chrX:119737835-119737915 ( 55) ACGTGGAG 1 chr17:27899983-27900063 ( 24) ACGTGGAC 1 chrX:12968446-12968526 ( 28) ACGTGACA 1 chr12:10766123-10766203 ( 44) ACGTGTCC 1 chr17:14212395-14212475 ( 14) ACGTGTCC 1 chr8:61429903-61429983 ( 61) ACGTGGGC 1 chr21:45139173-45139253 ( 55) ACGTGGGC 1 chr16:74402204-74402284 ( 22) ACGTGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.32554 E= 5.6e-062 240 -1293 -1293 -1293 -1293 166 -1293 -1293 -1293 -1293 171 -1293 -1293 -1293 -1293 241 -1293 -1293 171 -1293 -389 -1293 161 -188 -89 140 -225 -1293 120 -92 -88 29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 78 E= 5.6e-062 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.012821 0.000000 0.935897 0.051282 0.102564 0.833333 0.064103 0.000000 0.435897 0.166667 0.166667 0.230769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACGTGGCW MEME-1 regular expression -------------------------------------------------------------------------------- ACGTGGC[AT] -------------------------------------------------------------------------------- Time 4.79 secs. ******************************************************************************** ******************************************************************************** MOTIF GCCACGTC MEME-2 width = 8 sites = 53 llr = 471 E-value = 1.1e-032 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::a:::2 pos.-specific C :aa:a::7 probability G a::::9:1 matrix T :::::1a1 bits 2.4 * * 2.2 * * 1.9 * * 1.7 *** * Relative 1.4 ***** * Entropy 1.2 ******* (12.8 bits) 1.0 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GCCACGTC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr7:106005812-106005892 12 3.31e-05 CAAGTCACAA GCCACGTC TACTAAGGGA chr16:11891177-11891257 45 3.31e-05 GGGCGGTGGC GCCACGTC TGACTGGGGG chr14:31091473-31091553 16 3.31e-05 GGTAAGGGCA GCCACGTC ATCCCCCCGC chr5:54081613-54081693 16 3.31e-05 CCTGTCTTCT GCCACGTC TGCATGAAAT chr11:59383541-59383621 48 3.31e-05 GCCTGTCACT GCCACGTC ACCCCCTCCC chr4:76649775-76649855 21 3.31e-05 GCCACGTAAT GCCACGTC CCCGCGCATG chrX:47518010-47518090 45 3.31e-05 TGCTATGAAC GCCACGTC CCAGCCAAAC chrX:12968446-12968526 8 3.31e-05 AAAGTAA GCCACGTC ACCGTTtctg chr17:60247817-60247897 72 3.31e-05 CCCATCAACT GCCACGTC T chr12:7592711-7592791 18 3.31e-05 CGCCAGCGTG GCCACGTC CCGCTCAGGC chr11:6502546-6502626 52 3.31e-05 GAAGAAGCCG GCCACGTC GCAGATTATA chr13:46038964-46039044 23 3.31e-05 CCCATTTAAA GCCACGTC GGTACTGGCC chr1:12235419-12235499 27 3.31e-05 AGATTGCACT GCCACGTC ACCCAGCTCA chr12:99038763-99038843 58 3.31e-05 GGTCGCGCGC GCCACGTC GGGCGCGCCG chr6:33168623-33168703 50 3.31e-05 AGGCGGGACT GCCACGTC CAAGCAAACC chr5:89825363-89825443 61 3.31e-05 GTACGCCGCC GCCACGTC CGCAAACCTG chr3:57583103-57583183 9 3.31e-05 CTGGCTGT GCCACGTC ACGCGGCGGC chr17:42856631-42856711 13 3.31e-05 TGTGATGCCG GCCACGTC ATCCCTCCCG chr7:16793054-16793134 14 3.31e-05 TCAAAATGGT GCCACGTC ATCTGCCAGG chr3:47422101-47422181 16 3.31e-05 CGGCCCGCCC GCCACGTC ATCTCTACCA chr10:18948129-18948209 54 3.31e-05 CGAAGAAAAC GCCACGTC GAAGGCGTGG chr6:50993053-50993133 26 3.31e-05 CAGCCTCTAT GCCACGTC GGCAGACCTG chr22:38864030-38864110 24 3.31e-05 GGCCGCCCTG GCCACGTC ACCGCCCGGC chr21:45139173-45139253 37 3.31e-05 TCCATACAGA GCCACGTC ATCCGCGGCT chr19:42722112-42722192 10 3.31e-05 CCATGTAGC GCCACGTC ACGAGTAGTT chr4:119757209-119757289 61 3.31e-05 GCTGGGAACT GCCACGTC AAACCCTTTC chr11:75275252-75275332 15 3.31e-05 CCTCCTGCCT GCCACGTC ACCACCAGGA chr15:101137074-10113715 32 5.31e-05 CCCACTCCCT GCCACGTA CCTGAAgcta chr16:11348822-11348902 47 5.31e-05 GCGCGGCGCC GCCACGTA GTGCTCCAGC chr9:136242924-136243004 54 5.31e-05 TCCAGCGGCT GCCACGTA GGCCAAGCCT chr1:47647779-47647859 65 5.31e-05 gtcacaggca gccacgta agcaaaag chr19:46271711-46271791 26 5.31e-05 CCGGGTCGCT GCCACGTA GGCGCTCGGC chr3:100428308-100428388 45 5.31e-05 TCCCCCACCT GCCACGTA CAGAGCCCAA chrX:149106777-149106857 18 5.31e-05 tcgctaggaa gccacgta ttcacgaagc chr4:56261725-56261805 24 5.31e-05 GCGAGTCAGC GCCACGTA ACCAGAGGCG chr13:100150807-10015088 9 5.31e-05 ACACCGCA GCCACGTA ACCAAGGAAC chr16:70462633-70462713 71 1.26e-04 TCACAGATCT GCCACGTG GC chr11:62599429-62599509 22 1.26e-04 TGCCGCCGCC GCCACTTC CAATCTCACC chr6:8435713-8435793 49 1.26e-04 GCGCCCGCAG GCCACTTC CGCCTATGTG chr7:148269196-148269276 69 1.26e-04 ctttgtgcca gccacgtg taca chr17:77776489-77776569 73 1.26e-04 GACCGGTTGG GCCACGTG chr22:38430378-38430458 10 1.26e-04 atctgctcg gccacttc ctggccacgt chr1:184740443-184740523 55 1.26e-04 ctctgtgcca gccacgtg tacaataagg chr3:156271899-156271979 16 1.26e-04 ATTCCAAAAT GCCACGTG CAGCCCCAAA chr12:108297592-10829767 23 1.26e-04 gccacgccca gccacgTT GGCCGCCCGC chr3:100120391-100120471 7 1.26e-04 GTTATA GCCACGTT GGCACCTCTT chr1:230297183-230297263 47 1.26e-04 AAGAAATATG GCCACTTC CAATCCACTG chr3:122920683-122920763 51 1.26e-04 GCGGGCGCGA GCCACGTT GGACGCGCCG chr5:82373097-82373177 67 1.46e-04 CGATGCCGCA GCCACATC ACCCTT chr9:101984291-101984371 7 1.46e-04 AGTTAG GCCACATC AGCGCAAATC chr19:48894144-48894224 59 1.79e-04 GCCGCCACGG TCCACGTC ACCAACTCAC chr14:93260600-93260680 58 1.79e-04 TCGCTTCCCT TCCACGTC TCCCGGAAGC chr9:6681681-6681761 66 2.11e-04 GCGTGGTGCA GACACGTC GCCGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:106005812-106005892 3.3e-05 11_[+2]_61 chr16:11891177-11891257 3.3e-05 44_[+2]_28 chr14:31091473-31091553 3.3e-05 15_[+2]_57 chr5:54081613-54081693 3.3e-05 15_[+2]_57 chr11:59383541-59383621 3.3e-05 47_[+2]_25 chr4:76649775-76649855 3.3e-05 20_[+2]_52 chrX:47518010-47518090 3.3e-05 44_[+2]_28 chrX:12968446-12968526 3.3e-05 7_[+2]_65 chr17:60247817-60247897 3.3e-05 71_[+2]_1 chr12:7592711-7592791 3.3e-05 17_[+2]_55 chr11:6502546-6502626 3.3e-05 51_[+2]_21 chr13:46038964-46039044 3.3e-05 22_[+2]_50 chr1:12235419-12235499 3.3e-05 26_[+2]_46 chr12:99038763-99038843 3.3e-05 57_[+2]_15 chr6:33168623-33168703 3.3e-05 49_[+2]_23 chr5:89825363-89825443 3.3e-05 60_[+2]_12 chr3:57583103-57583183 3.3e-05 8_[+2]_64 chr17:42856631-42856711 3.3e-05 12_[+2]_60 chr7:16793054-16793134 3.3e-05 13_[+2]_59 chr3:47422101-47422181 3.3e-05 15_[+2]_57 chr10:18948129-18948209 3.3e-05 53_[+2]_19 chr6:50993053-50993133 3.3e-05 25_[+2]_47 chr22:38864030-38864110 3.3e-05 23_[+2]_49 chr21:45139173-45139253 3.3e-05 36_[+2]_36 chr19:42722112-42722192 3.3e-05 9_[+2]_63 chr4:119757209-119757289 3.3e-05 60_[+2]_12 chr11:75275252-75275332 3.3e-05 14_[+2]_58 chr15:101137074-10113715 5.3e-05 31_[+2]_41 chr16:11348822-11348902 5.3e-05 46_[+2]_26 chr9:136242924-136243004 5.3e-05 53_[+2]_19 chr1:47647779-47647859 5.3e-05 64_[+2]_8 chr19:46271711-46271791 5.3e-05 25_[+2]_47 chr3:100428308-100428388 5.3e-05 44_[+2]_28 chrX:149106777-149106857 5.3e-05 17_[+2]_55 chr4:56261725-56261805 5.3e-05 23_[+2]_49 chr13:100150807-10015088 5.3e-05 8_[+2]_64 chr16:70462633-70462713 0.00013 70_[+2]_2 chr11:62599429-62599509 0.00013 21_[+2]_51 chr6:8435713-8435793 0.00013 48_[+2]_24 chr7:148269196-148269276 0.00013 68_[+2]_4 chr17:77776489-77776569 0.00013 72_[+2] chr22:38430378-38430458 0.00013 9_[+2]_63 chr1:184740443-184740523 0.00013 54_[+2]_18 chr3:156271899-156271979 0.00013 15_[+2]_57 chr12:108297592-10829767 0.00013 22_[+2]_50 chr3:100120391-100120471 0.00013 6_[+2]_66 chr1:230297183-230297263 0.00013 46_[+2]_26 chr3:122920683-122920763 0.00013 50_[+2]_22 chr5:82373097-82373177 0.00015 66_[+2]_6 chr9:101984291-101984371 0.00015 6_[+2]_66 chr19:48894144-48894224 0.00018 58_[+2]_14 chr14:93260600-93260680 0.00018 57_[+2]_15 chr9:6681681-6681761 0.00021 65_[+2]_7 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCACGTC width=8 seqs=53 chr7:106005812-106005892 ( 12) GCCACGTC 1 chr16:11891177-11891257 ( 45) GCCACGTC 1 chr14:31091473-31091553 ( 16) GCCACGTC 1 chr5:54081613-54081693 ( 16) GCCACGTC 1 chr11:59383541-59383621 ( 48) GCCACGTC 1 chr4:76649775-76649855 ( 21) GCCACGTC 1 chrX:47518010-47518090 ( 45) GCCACGTC 1 chrX:12968446-12968526 ( 8) GCCACGTC 1 chr17:60247817-60247897 ( 72) GCCACGTC 1 chr12:7592711-7592791 ( 18) GCCACGTC 1 chr11:6502546-6502626 ( 52) GCCACGTC 1 chr13:46038964-46039044 ( 23) GCCACGTC 1 chr1:12235419-12235499 ( 27) GCCACGTC 1 chr12:99038763-99038843 ( 58) GCCACGTC 1 chr6:33168623-33168703 ( 50) GCCACGTC 1 chr5:89825363-89825443 ( 61) GCCACGTC 1 chr3:57583103-57583183 ( 9) GCCACGTC 1 chr17:42856631-42856711 ( 13) GCCACGTC 1 chr7:16793054-16793134 ( 14) GCCACGTC 1 chr3:47422101-47422181 ( 16) GCCACGTC 1 chr10:18948129-18948209 ( 54) GCCACGTC 1 chr6:50993053-50993133 ( 26) GCCACGTC 1 chr22:38864030-38864110 ( 24) GCCACGTC 1 chr21:45139173-45139253 ( 37) GCCACGTC 1 chr19:42722112-42722192 ( 10) GCCACGTC 1 chr4:119757209-119757289 ( 61) GCCACGTC 1 chr11:75275252-75275332 ( 15) GCCACGTC 1 chr15:101137074-10113715 ( 32) GCCACGTA 1 chr16:11348822-11348902 ( 47) GCCACGTA 1 chr9:136242924-136243004 ( 54) GCCACGTA 1 chr1:47647779-47647859 ( 65) GCCACGTA 1 chr19:46271711-46271791 ( 26) GCCACGTA 1 chr3:100428308-100428388 ( 45) GCCACGTA 1 chrX:149106777-149106857 ( 18) GCCACGTA 1 chr4:56261725-56261805 ( 24) GCCACGTA 1 chr13:100150807-10015088 ( 9) GCCACGTA 1 chr16:70462633-70462713 ( 71) GCCACGTG 1 chr11:62599429-62599509 ( 22) GCCACTTC 1 chr6:8435713-8435793 ( 49) GCCACTTC 1 chr7:148269196-148269276 ( 69) GCCACGTG 1 chr17:77776489-77776569 ( 73) GCCACGTG 1 chr22:38430378-38430458 ( 10) GCCACTTC 1 chr1:184740443-184740523 ( 55) GCCACGTG 1 chr3:156271899-156271979 ( 16) GCCACGTG 1 chr12:108297592-10829767 ( 23) GCCACGTT 1 chr3:100120391-100120471 ( 7) GCCACGTT 1 chr1:230297183-230297263 ( 47) GCCACTTC 1 chr3:122920683-122920763 ( 51) GCCACGTT 1 chr5:82373097-82373177 ( 67) GCCACATC 1 chr9:101984291-101984371 ( 7) GCCACATC 1 chr19:48894144-48894224 ( 59) TCCACGTC 1 chr14:93260600-93260680 ( 58) TCCACGTC 1 chr9:6681681-6681761 ( 66) GACACGTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.97483 E= 1.1e-032 -1237 -1237 165 -232 -333 164 -1237 -1237 -1237 166 -1237 -1237 240 -1237 -1237 -1237 -1237 166 -1237 -1237 -233 -1237 153 -132 -1237 -1237 -1237 241 -16 111 -170 -174 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 53 E= 1.1e-032 0.000000 0.000000 0.962264 0.037736 0.018868 0.981132 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.037736 0.000000 0.886792 0.075472 0.000000 0.000000 0.000000 1.000000 0.169811 0.679245 0.094340 0.056604 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCACGTC MEME-2 regular expression -------------------------------------------------------------------------------- GCCACGTC -------------------------------------------------------------------------------- Time 8.29 secs. ******************************************************************************** ******************************************************************************** MOTIF TCTAGAAC MEME-3 width = 8 sites = 26 llr = 238 E-value = 7.2e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 Description -------------------------------------------------------------------------------- Simplified A :::8:a9: pos.-specific C 1a1::::9 probability G 1::1a:11 matrix T 8:91:::: bits 2.4 * 2.2 * 1.9 * * 1.7 * *** Relative 1.4 *** *** Entropy 1.2 ******** (13.2 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCTAGAAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:27220302-27220382 60 7.44e-06 CCACACGAAA TCTAGAAC TGCTCCCATG chr16:84512423-84512503 64 7.44e-06 TTCCCAGAGG TCTAGAAC CCAGGCCAG chr5:150138134-150138214 72 7.44e-06 CAGAGGCCGC TCTAGAAC C chr7:50423919-50423999 47 7.44e-06 AGAATGGCCT TCTAGAAC TATCAGGAAC chr18:55454651-55454731 53 7.44e-06 AGGAGCTCCA TCTAGAAC ACTGCGGGAG chr7:106648420-106648500 38 7.44e-06 TCAGCCATAA TCTAGAAC TGGCCTCCAT chr19:3590994-3591074 13 7.44e-06 CAAGCCCAGC TCTAGAAC CCAGATAAGC chr16:2812458-2812538 16 7.44e-06 CAGGTCACGC TCTAGAAC CCCAGCTAGA chr13:33049733-33049813 63 1.48e-05 ggagcctcca tcttgaac atgattggca chr16:8159678-8159758 56 1.48e-05 ggtgccacca tcttgaac atgtctagtt chr3:100120391-100120471 21 1.48e-05 CGTTGGCACC TCTTGAAC CTCTGTGGCC chr2:65215535-65215615 49 2.21e-05 CTCTGTTTCT TCTAGAAG AGCTTTGCGT chr19:49471598-49471678 56 2.21e-05 AGGTTCCAGA TCTAGAAG CCAGGACCTA chr19:47985069-47985149 20 3.40e-05 TGGAATGGAA TCTGGAAC TCTAGAATGG chr6:21981634-21981714 45 3.40e-05 TCTTTTCTGC TCTGGAAC CTGTCTTCTC chr14:96709626-96709706 44 5.85e-05 ACCTAGAAGG GCTAGAAC CTGGAGGGCT chr19:18393254-18393334 46 5.85e-05 CCCTTAGAAC CCTAGAAC CTGGGAGTCC chr7:107204058-107204138 30 5.85e-05 AAATAGGTTG GCTAGAAC AGTACCCAAG chr1:22029347-22029427 39 5.85e-05 agatacagaa cctagaac ctgtctatca chr4:2263088-2263168 57 8.29e-05 CCTGGAAAAG TCCAGAAC AACTcggggg chrX:154564085-154564165 60 8.29e-05 CCAGATGTTT TCTAGAGC CTCCCTTTGA chr3:43728268-43728348 42 8.29e-05 acagggttgC TCTAGAGc tcattactta chr12:3792998-3793078 52 8.29e-05 CCTCACACAC TCCAGAAC CTGACCAGCC chr19:51894079-51894159 46 9.75e-05 gacccaagag tctagatc cccagccccc chr3:128968432-128968512 40 9.75e-05 AAGTGGTCCC TGTAGAAC CACTGTGGCA chr17:14212395-14212475 65 1.16e-04 GACATCCCGT TCTGGAAG GGTGGCCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:27220302-27220382 7.4e-06 59_[+3]_13 chr16:84512423-84512503 7.4e-06 63_[+3]_9 chr5:150138134-150138214 7.4e-06 71_[+3]_1 chr7:50423919-50423999 7.4e-06 46_[+3]_26 chr18:55454651-55454731 7.4e-06 52_[+3]_20 chr7:106648420-106648500 7.4e-06 37_[+3]_35 chr19:3590994-3591074 7.4e-06 12_[+3]_60 chr16:2812458-2812538 7.4e-06 15_[+3]_57 chr13:33049733-33049813 1.5e-05 62_[+3]_10 chr16:8159678-8159758 1.5e-05 55_[+3]_17 chr3:100120391-100120471 1.5e-05 20_[+3]_52 chr2:65215535-65215615 2.2e-05 48_[+3]_24 chr19:49471598-49471678 2.2e-05 55_[+3]_17 chr19:47985069-47985149 3.4e-05 19_[+3]_53 chr6:21981634-21981714 3.4e-05 44_[+3]_28 chr14:96709626-96709706 5.8e-05 43_[+3]_29 chr19:18393254-18393334 5.8e-05 45_[+3]_27 chr7:107204058-107204138 5.8e-05 29_[+3]_43 chr1:22029347-22029427 5.8e-05 38_[+3]_34 chr4:2263088-2263168 8.3e-05 56_[+3]_16 chrX:154564085-154564165 8.3e-05 59_[+3]_13 chr3:43728268-43728348 8.3e-05 41_[+3]_31 chr12:3792998-3793078 8.3e-05 51_[+3]_21 chr19:51894079-51894159 9.7e-05 45_[+3]_27 chr3:128968432-128968512 9.7e-05 39_[+3]_33 chr17:14212395-14212475 0.00012 64_[+3]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCTAGAAC width=8 seqs=26 chr8:27220302-27220382 ( 60) TCTAGAAC 1 chr16:84512423-84512503 ( 64) TCTAGAAC 1 chr5:150138134-150138214 ( 72) TCTAGAAC 1 chr7:50423919-50423999 ( 47) TCTAGAAC 1 chr18:55454651-55454731 ( 53) TCTAGAAC 1 chr7:106648420-106648500 ( 38) TCTAGAAC 1 chr19:3590994-3591074 ( 13) TCTAGAAC 1 chr16:2812458-2812538 ( 16) TCTAGAAC 1 chr13:33049733-33049813 ( 63) TCTTGAAC 1 chr16:8159678-8159758 ( 56) TCTTGAAC 1 chr3:100120391-100120471 ( 21) TCTTGAAC 1 chr2:65215535-65215615 ( 49) TCTAGAAG 1 chr19:49471598-49471678 ( 56) TCTAGAAG 1 chr19:47985069-47985149 ( 20) TCTGGAAC 1 chr6:21981634-21981714 ( 45) TCTGGAAC 1 chr14:96709626-96709706 ( 44) GCTAGAAC 1 chr19:18393254-18393334 ( 46) CCTAGAAC 1 chr7:107204058-107204138 ( 30) GCTAGAAC 1 chr1:22029347-22029427 ( 39) CCTAGAAC 1 chr4:2263088-2263168 ( 57) TCCAGAAC 1 chrX:154564085-154564165 ( 60) TCTAGAGC 1 chr3:43728268-43728348 ( 42) TCTAGAGC 1 chr12:3792998-3793078 ( 52) TCCAGAAC 1 chr19:51894079-51894159 ( 46) TCTAGATC 1 chr3:128968432-128968512 ( 40) TGTAGAAC 1 chr17:14212395-14212475 ( 65) TCTGGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.6186 E= 7.2e-005 -1134 -203 -199 216 -1134 161 -299 -1134 -1134 -203 -1134 229 202 -1134 -141 -71 -1134 -1134 171 -1134 240 -1134 -1134 -1134 222 -1134 -199 -229 -1134 149 -141 -1134 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 26 E= 7.2e-005 0.000000 0.076923 0.076923 0.846154 0.000000 0.961538 0.038462 0.000000 0.000000 0.076923 0.000000 0.923077 0.769231 0.000000 0.115385 0.115385 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.884615 0.000000 0.076923 0.038462 0.000000 0.884615 0.115385 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTAGAAC MEME-3 regular expression -------------------------------------------------------------------------------- TCTAGAAC -------------------------------------------------------------------------------- Time 11.75 secs. ******************************************************************************** ******************************************************************************** MOTIF TCTCGCGA MEME-4 width = 8 sites = 18 llr = 177 E-value = 1.6e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 Description -------------------------------------------------------------------------------- Simplified A :1:::::a pos.-specific C 19:a1a:: probability G ::::9:9: matrix T 9:a:::1: bits 2.4 * * 2.2 * * 1.9 * * * 1.7 * ** * * Relative 1.4 ******** Entropy 1.2 ******** (14.2 bits) 1.0 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TCTCGCGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:51565103-51565183 44 1.99e-05 CGAGCGGAGA TCTCGCGA GACTGTCAGA chr6:44355226-44355306 19 1.99e-05 ACCGCCGCTA TCTCGCGA GAGCCGTAGT chr3:139108446-139108526 64 1.99e-05 GGGAGCCGAT TCTCGCGA TAGTCAGAG chr19:4124131-4124211 31 1.99e-05 CGGACCGGCT TCTCGCGA TAACGGGATC chr9:6681681-6681761 10 1.99e-05 GCTTGGGGC TCTCGCGA GACCCGGCGC chr17:53046016-53046096 59 1.99e-05 GCGTGCTCCG TCTCGCGA GATCTGGGTT chr17:7760844-7760924 3 1.99e-05 GA TCTCGCGA GCGCTCCCGA chr9:88555871-88555951 48 1.99e-05 TAACTTCCGG TCTCGCGA TCGTCTCTAA chr11:13484826-13484906 35 1.99e-05 CCAGCAGCGT TCTCGCGA GAACGGTGCT chr3:49131513-49131593 8 1.99e-05 TTGCTCC TCTCGCGA TAATCGGGGC chr17:4843537-4843617 17 1.99e-05 GTTGGAGCGC TCTCGCGA TAGACACAGC chr16:74402204-74402284 39 1.99e-05 CTTGTTTGGG TCTCGCGA GGCACCGCCC chr2:220363557-220363637 24 1.99e-05 GCGAATGAGT TCTCGCGA CTTGCGAGAA chrX:53711232-53711312 9 4.41e-05 ACATGAGA TATCGCGA GACCTGGTGC chr3:100428308-100428388 65 4.41e-05 GAGCCCAAGT TCTCGCTA GGCTTGTT chr17:4167235-4167315 25 7.72e-05 CTGCCTGCAA CCTCGCGA GAAGTGCGCG chr16:70148030-70148110 24 7.72e-05 GGGGGCGGTG CCTCGCGA GACCCAAACA chr12:21654727-21654807 63 9.77e-05 CGGCTTCATT TCTCCCGA CTCAGCTTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:51565103-51565183 2e-05 43_[+4]_29 chr6:44355226-44355306 2e-05 18_[+4]_54 chr3:139108446-139108526 2e-05 63_[+4]_9 chr19:4124131-4124211 2e-05 30_[+4]_42 chr9:6681681-6681761 2e-05 9_[+4]_63 chr17:53046016-53046096 2e-05 58_[+4]_14 chr17:7760844-7760924 2e-05 2_[+4]_70 chr9:88555871-88555951 2e-05 47_[+4]_25 chr11:13484826-13484906 2e-05 34_[+4]_38 chr3:49131513-49131593 2e-05 7_[+4]_65 chr17:4843537-4843617 2e-05 16_[+4]_56 chr16:74402204-74402284 2e-05 38_[+4]_34 chr2:220363557-220363637 2e-05 23_[+4]_49 chrX:53711232-53711312 4.4e-05 8_[+4]_64 chr3:100428308-100428388 4.4e-05 64_[+4]_8 chr17:4167235-4167315 7.7e-05 24_[+4]_48 chr16:70148030-70148110 7.7e-05 23_[+4]_49 chr12:21654727-21654807 9.8e-05 62_[+4]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCTCGCGA width=8 seqs=18 chr10:51565103-51565183 ( 44) TCTCGCGA 1 chr6:44355226-44355306 ( 19) TCTCGCGA 1 chr3:139108446-139108526 ( 64) TCTCGCGA 1 chr19:4124131-4124211 ( 31) TCTCGCGA 1 chr9:6681681-6681761 ( 10) TCTCGCGA 1 chr17:53046016-53046096 ( 59) TCTCGCGA 1 chr17:7760844-7760924 ( 3) TCTCGCGA 1 chr9:88555871-88555951 ( 48) TCTCGCGA 1 chr11:13484826-13484906 ( 35) TCTCGCGA 1 chr3:49131513-49131593 ( 8) TCTCGCGA 1 chr17:4843537-4843617 ( 17) TCTCGCGA 1 chr16:74402204-74402284 ( 39) TCTCGCGA 1 chr2:220363557-220363637 ( 24) TCTCGCGA 1 chrX:53711232-53711312 ( 9) TATCGCGA 1 chr3:100428308-100428388 ( 65) TCTCGCTA 1 chr17:4167235-4167315 ( 25) CCTCGCGA 1 chr16:70148030-70148110 ( 24) CCTCGCGA 1 chr12:21654727-21654807 ( 63) TCTCCCGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1187 E= 1.6e-002 -1081 -150 -1081 224 -177 158 -1081 -1081 -1081 -1081 -1081 241 -1081 166 -1081 -1081 -1081 -250 163 -1081 -1081 166 -1081 -1081 -1081 -1081 163 -176 240 -1081 -1081 -1081 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 18 E= 1.6e-002 0.000000 0.111111 0.000000 0.888889 0.055556 0.944444 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.055556 0.944444 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.944444 0.055556 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTCGCGA MEME-4 regular expression -------------------------------------------------------------------------------- TCTCGCGA -------------------------------------------------------------------------------- Time 15.20 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTMTTTT MEME-5 width = 8 sites = 13 llr = 131 E-value = 1.1e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :225:::: pos.-specific C :::32::: probability G :1::::1: matrix T a8828a9a bits 2.4 * * * 2.2 * * * 1.9 * *** 1.7 * * *** Relative 1.4 *** **** Entropy 1.2 *** **** (14.5 bits) 1.0 *** **** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTTATTTT consensus CC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr4:7755832-7755912 72 1.64e-06 cagttaagcc tttatttt c chrX:54466695-54466775 20 4.35e-06 CTGACAGATT TTTCTTTT GCTCTAGTCT chr15:52313536-52313616 30 5.98e-06 GGCttttttt tttttttt ttttaaataC chr3:100428308-100428388 5 5.98e-06 ACAT TTTTTTTT TTCTTGCTCC chr9:101984291-101984371 73 7.62e-06 TGACCCCGGT TATATTTT chr3:171783403-171783483 62 1.20e-05 TGATCTGTCA TTTACTTT GAAAAGGAAT chr12:112074396-11207447 5 1.20e-05 GATC TTAATTTT TTTCCCCAAG chr12:14518994-14519074 37 1.20e-05 GGTTCTAGAT TTAATTTT CCTCGTTCTT chr1:46770424-46770504 28 1.47e-05 agaggttaaa tatctttt ctaaggtcat chr17:7760844-7760924 25 2.46e-05 TCCCGACCTC TTTCCTTT CGCGAGATCC chr10:81918513-81918593 11 2.46e-05 CCTGCAGGGA TGTATTTT TAGAGGAAAC chr19:50031056-50031136 54 2.46e-05 CAGGCCGCGG TTTCCTTT GTGGACGTGG chr16:8159678-8159758 9 3.33e-05 ctctgctc tttattgt acacgtggct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:7755832-7755912 1.6e-06 71_[+5]_1 chrX:54466695-54466775 4.4e-06 19_[+5]_53 chr15:52313536-52313616 6e-06 29_[+5]_43 chr3:100428308-100428388 6e-06 4_[+5]_68 chr9:101984291-101984371 7.6e-06 72_[+5] chr3:171783403-171783483 1.2e-05 61_[+5]_11 chr12:112074396-11207447 1.2e-05 4_[+5]_68 chr12:14518994-14519074 1.2e-05 36_[+5]_36 chr1:46770424-46770504 1.5e-05 27_[+5]_45 chr17:7760844-7760924 2.5e-05 24_[+5]_48 chr10:81918513-81918593 2.5e-05 10_[+5]_62 chr19:50031056-50031136 2.5e-05 53_[+5]_19 chr16:8159678-8159758 3.3e-05 8_[+5]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTMTTTT width=8 seqs=13 chr4:7755832-7755912 ( 72) TTTATTTT 1 chrX:54466695-54466775 ( 20) TTTCTTTT 1 chr15:52313536-52313616 ( 30) TTTTTTTT 1 chr3:100428308-100428388 ( 5) TTTTTTTT 1 chr9:101984291-101984371 ( 73) TATATTTT 1 chr3:171783403-171783483 ( 62) TTTACTTT 1 chr12:112074396-11207447 ( 5) TTAATTTT 1 chr12:14518994-14519074 ( 37) TTAATTTT 1 chr1:46770424-46770504 ( 28) TATCTTTT 1 chr17:7760844-7760924 ( 25) TTTCCTTT 1 chr10:81918513-81918593 ( 11) TGTATTTT 1 chr19:50031056-50031136 ( 54) TTTCCTTT 1 chr16:8159678-8159758 ( 9) TTTATTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.0849 E= 1.1e+001 -1035 -1035 -1035 240 -30 -1035 -199 203 -30 -1035 -1035 216 150 -4 -1035 -29 -1035 -45 -1035 203 -1035 -1035 -1035 240 -1035 -1035 -199 229 -1035 -1035 -1035 240 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 13 E= 1.1e+001 0.000000 0.000000 0.000000 1.000000 0.153846 0.000000 0.076923 0.769231 0.153846 0.000000 0.000000 0.846154 0.538462 0.307692 0.000000 0.153846 0.000000 0.230769 0.000000 0.769231 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.076923 0.923077 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTMTTTT MEME-5 regular expression -------------------------------------------------------------------------------- TTT[AC][TC]TTT -------------------------------------------------------------------------------- Time 18.75 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:3792998-3793078 2.20e-01 51_[+3(8.29e-05)]_21 chr19:7197637-7197717 9.47e-01 80 chr9:108301876-108301956 4.18e-01 80 chr1:230031414-230031494 9.54e-01 80 chr16:2812458-2812538 2.51e-03 15_[+3(7.44e-06)]_25_[+3(8.29e-05)]_\ 24 chr11:75275252-75275332 6.56e-02 14_[+2(3.31e-05)]_58 chr5:131563638-131563718 9.91e-01 80 chr4:119757209-119757289 1.03e-01 60_[+2(3.31e-05)]_12 chr19:3590994-3591074 8.07e-02 12_[+3(7.44e-06)]_60 chr2:238551174-238551254 9.64e-01 80 chr5:108745796-108745876 1.15e-01 66_[+1(1.94e-05)]_6 chr7:97762586-97762666 4.01e-01 80 chr11:62341673-62341753 6.56e-01 80 chr3:128195661-128195741 9.26e-01 80 chr17:18684538-18684618 2.67e-02 31_[+1(3.87e-05)]_41 chr16:55787143-55787223 6.66e-01 80 chr2:27255753-27255833 6.70e-02 56_[+1(1.94e-05)]_16 chr12:117080650-11708073 5.88e-01 80 chr7:6523728-6523808 8.37e-02 80 chr14:93260600-93260680 2.54e-02 80 chr7:106648420-106648500 1.80e-02 5_[+3(3.40e-05)]_24_[+3(7.44e-06)]_\ 35 chr2:220363557-220363637 4.22e-03 23_[+4(1.99e-05)]_49 chr19:7197853-7197933 9.38e-01 80 chr12:6938584-6938664 1.77e-01 30_[+1(3.87e-05)]_42 chr19:42722112-42722192 9.93e-03 9_[+2(3.31e-05)]_63 chr19:49471598-49471678 1.80e-02 55_[+3(2.21e-05)]_6_[+3(5.85e-05)]_\ 3 chr1:156093523-156093603 9.56e-01 80 chr3:122920683-122920763 1.90e-01 80 chr4:7755832-7755912 9.21e-04 71_[+5(1.64e-06)]_1 chr3:128968432-128968512 3.06e-03 39_[+3(9.75e-05)]_33 chr16:27246711-27246791 4.33e-03 61_[+1(3.87e-05)]_11 chr13:100150807-10015088 3.54e-02 8_[+2(5.31e-05)]_64 chrX:54466695-54466775 7.69e-03 19_[+5(4.35e-06)]_53 chr2:71357270-71357350 7.75e-01 80 chr16:74402204-74402284 3.34e-04 38_[+4(1.99e-05)]_34 chr20:35402420-35402500 3.40e-02 80 chr1:230297183-230297263 4.64e-03 28_[+1(1.94e-05)]_44 chr18:55454651-55454731 1.04e-01 [+3(7.44e-06)]_18_[+3(7.44e-06)]_18_\ [+3(7.44e-06)]_20 chr21:45139173-45139253 6.40e-03 36_[+2(3.31e-05)]_36 chr12:46777749-46777829 7.69e-02 32_[+1(3.87e-05)]_40 chr2:68589298-68589378 3.40e-03 30_[+1(1.94e-05)]_42 chr1:22029347-22029427 6.02e-02 38_[+3(5.85e-05)]_34 chr3:100120391-100120471 8.40e-04 20_[+3(1.48e-05)]_52 chr1:142618904-142618984 2.98e-01 80 chr8:61429903-61429983 6.99e-02 80 chr22:38864030-38864110 1.12e-01 23_[+2(3.31e-05)]_49 chr12:14518994-14519074 8.24e-03 36_[+5(1.20e-05)]_36 chr5:143550141-143550221 3.28e-02 80 chr3:43728268-43728348 2.12e-01 41_[+3(8.29e-05)]_31 chr4:56261725-56261805 6.25e-02 23_[+2(5.31e-05)]_49 chr7:66656108-66656188 6.95e-01 80 chr19:50031056-50031136 7.27e-04 53_[+5(2.46e-05)]_4_[+1(6.99e-05)]_\ 7 chr6:90062644-90062724 7.55e-02 22_[+1(1.94e-05)]_50 chr12:107349648-10734972 6.16e-02 80 chrX:119737835-119737915 1.37e-01 80 chr1:46712693-46712773 1.35e-03 14_[+1(1.94e-05)]_58 chr1:46770424-46770504 1.05e-01 27_[+5(1.47e-05)]_45 chr6:50993053-50993133 4.97e-02 25_[+2(3.31e-05)]_47 chr10:18948129-18948209 5.71e-02 53_[+2(3.31e-05)]_19 chr20:30135033-30135113 8.61e-01 80 chr11:118758629-11875870 8.84e-01 80 chr6:36087112-36087192 4.81e-01 80 chr16:68298294-68298374 5.34e-02 80 chr7:130626370-130626450 6.08e-03 33_[+1(1.94e-05)]_39 chr1:153950100-153950180 7.56e-01 80 chr10:102820984-10282106 4.63e-01 80 chr17:14212395-14212475 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******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n05.farnam.hpc.yale.internal ********************************************************************************