******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/CREB3.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr5:42991152-42991232 1.0000 80 chr3:112455760-112455840 1.0000 80 chr11:113061265-11306134 1.0000 80 chr3:39067281-39067361 1.0000 80 chr7:41790752-41790832 1.0000 80 chr3:40393378-40393458 1.0000 80 chr5:32562317-32562397 1.0000 80 chr6:145171193-145171273 1.0000 80 chr11:75275236-75275316 1.0000 80 chr7:156413036-156413116 1.0000 80 chr3:58692290-58692370 1.0000 80 chr1:103120712-103120792 1.0000 80 chr7:30767724-30767804 1.0000 80 chr9:102796289-102796369 1.0000 80 chr1:17219552-17219632 1.0000 80 chr1:16843623-16843703 1.0000 80 chr3:112488704-112488784 1.0000 80 chr13:27949002-27949082 1.0000 80 chr1:161527712-161527792 1.0000 80 chr18:3607819-3607899 1.0000 80 chr12:132038144-13203822 1.0000 80 chr12:47508430-47508510 1.0000 80 chr2:125751527-125751607 1.0000 80 chr3:43728853-43728933 1.0000 80 chr7:128540934-128541014 1.0000 80 chr21:45204280-45204360 1.0000 80 chr12:113154069-11315414 1.0000 80 chr11:75759901-75759981 1.0000 80 chr20:45264246-45264326 1.0000 80 chr21:19062534-19062614 1.0000 80 chr3:44509774-44509854 1.0000 80 chr3:43729833-43729913 1.0000 80 chr1:161286277-161286357 1.0000 80 chr5:171868450-171868530 1.0000 80 chr6:49690248-49690328 1.0000 80 chr1:95078482-95078562 1.0000 80 chr8:30060532-30060612 1.0000 80 chr1:168302923-168303003 1.0000 80 chr6:110200956-110201036 1.0000 80 chr21:37451598-37451678 1.0000 80 chr4:38319040-38319120 1.0000 80 chr7:92778234-92778314 1.0000 80 chr5:179946305-179946385 1.0000 80 chr5:67924074-67924154 1.0000 80 chr10:72428415-72428495 1.0000 80 chr10:44479452-44479532 1.0000 80 chr17:25435138-25435218 1.0000 80 chr5:43358599-43358679 1.0000 80 chr9:79041125-79041205 1.0000 80 chr7:150019263-150019343 1.0000 80 chr7:23634955-23635035 1.0000 80 chr1:211396306-211396386 1.0000 80 chr1:157298044-157298124 1.0000 80 chr18:3655785-3655865 1.0000 80 chrX:12968423-12968503 1.0000 80 chr7:156716269-156716349 1.0000 80 chr17:75084058-75084138 1.0000 80 chr14:96087115-96087195 1.0000 80 chr5:112368292-112368372 1.0000 80 chr5:67924281-67924361 1.0000 80 chr2:129201339-129201419 1.0000 80 chr17:37490259-37490339 1.0000 80 chr9:100812096-100812176 1.0000 80 chr10:13396622-13396702 1.0000 80 chr19:43949718-43949798 1.0000 80 chr3:189744062-189744142 1.0000 80 chr7:105824537-105824617 1.0000 80 chr4:10245656-10245736 1.0000 80 chr14:94576121-94576201 1.0000 80 chr12:70484862-70484942 1.0000 80 chr1:156725467-156725547 1.0000 80 chr1:223972457-223972537 1.0000 80 chr21:34607579-34607659 1.0000 80 chr9:95876036-95876116 1.0000 80 chr6:20188912-20188992 1.0000 80 chr18:71856621-71856701 1.0000 80 chr4:68568107-68568187 1.0000 80 chr7:106437327-106437407 1.0000 80 chr10:12307542-12307622 1.0000 80 chr22:19935417-19935497 1.0000 80 chr1:65758550-65758630 1.0000 80 chr19:33177929-33178009 1.0000 80 chr2:104086445-104086525 1.0000 80 chr1:213860595-213860675 1.0000 80 chr6:15090271-15090351 1.0000 80 chr20:1182813-1182893 1.0000 80 chr10:50465413-50465493 1.0000 80 chr5:95043438-95043518 1.0000 80 chr12:108514065-10851414 1.0000 80 chr12:132036402-13203648 1.0000 80 chr20:5726863-5726943 1.0000 80 chrX:30992052-30992132 1.0000 80 chr4:10185271-10185351 1.0000 80 chr5:132307660-132307740 1.0000 80 chr18:53615344-53615424 1.0000 80 chr22:39168006-39168086 1.0000 80 chr1:179099141-179099221 1.0000 80 chr11:3530964-3531044 1.0000 80 chr11:44551784-44551864 1.0000 80 chr7:22219119-22219199 1.0000 80 chr5:65439444-65439524 1.0000 80 chr9:100812789-100812869 1.0000 80 chr2:208657241-208657321 1.0000 80 chr2:69961394-69961474 1.0000 80 chr6:147212309-147212389 1.0000 80 chr1:227038662-227038742 1.0000 80 chr7:73574329-73574409 1.0000 80 chr15:45840908-45840988 1.0000 80 chr6:89718637-89718717 1.0000 80 chr4:166396998-166397078 1.0000 80 chr3:69063896-69063976 1.0000 80 chr12:110488104-11048818 1.0000 80 chr15:35992608-35992688 1.0000 80 chr5:56451044-56451124 1.0000 80 chr1:142886480-142886560 1.0000 80 chr12:114022104-11402218 1.0000 80 chr9:80507968-80508048 1.0000 80 chr11:61407393-61407473 1.0000 80 chr8:131674431-131674511 1.0000 80 chr10:28674893-28674973 1.0000 80 chr10:33345933-33346013 1.0000 80 chr1:9835312-9835392 1.0000 80 chr11:9341163-9341243 1.0000 80 chr6:28454820-28454900 1.0000 80 chr2:87816018-87816098 1.0000 80 chr1:211396508-211396588 1.0000 80 chr8:144631451-144631531 1.0000 80 chr3:5030842-5030922 1.0000 80 chr3:5124061-5124141 1.0000 80 chr3:127451786-127451866 1.0000 80 chr4:165972075-165972155 1.0000 80 chr4:36759745-36759825 1.0000 80 chr7:135594152-135594232 1.0000 80 chr11:61781521-61781601 1.0000 80 chr2:112192032-112192112 1.0000 80 chr7:149261857-149261937 1.0000 80 chr18:3659802-3659882 1.0000 80 chr17:70758206-70758286 1.0000 80 chr16:50491942-50492022 1.0000 80 chr10:99177779-99177859 1.0000 80 chr20:5615704-5615784 1.0000 80 chr10:21552983-21553063 1.0000 80 chr20:49125564-49125644 1.0000 80 chr20:36170910-36170990 1.0000 80 chr6:34688089-34688169 1.0000 80 chr1:173391905-173391985 1.0000 80 chr3:195414162-195414242 1.0000 80 chr1:22231226-22231306 1.0000 80 chr16:17684940-17685020 1.0000 80 chr6:109745722-109745802 1.0000 80 chr7:150052897-150052977 1.0000 80 chrX:154044940-154045020 1.0000 80 chr19:29019553-29019633 1.0000 80 chrX:16604164-16604244 1.0000 80 chr12:116774589-11677466 1.0000 80 chr9:33703601-33703681 1.0000 80 chr19:49385475-49385555 1.0000 80 chr10:4909320-4909400 1.0000 80 chr6:28325001-28325081 1.0000 80 chr7:130626382-130626462 1.0000 80 chr1:166662601-166662681 1.0000 80 chr1:173443568-173443648 1.0000 80 chr6:107278996-107279076 1.0000 80 chr11:63298712-63298792 1.0000 80 chr16:17176613-17176693 1.0000 80 chr16:17176410-17176490 1.0000 80 chr1:85745576-85745656 1.0000 80 chr11:96063820-96063900 1.0000 80 chr1:11748693-11748773 1.0000 80 chr1:116820565-116820645 1.0000 80 chr1:11748916-11748996 1.0000 80 chr1:39855965-39856045 1.0000 80 chr1:26451582-26451662 1.0000 80 chr16:26981063-26981143 1.0000 80 chr6:24401168-24401248 1.0000 80 chr1:225654674-225654754 1.0000 80 chr1:1545373-1545453 1.0000 80 chr2:86117838-86117918 1.0000 80 chr9:139684047-139684127 1.0000 80 chr3:72053971-72054051 1.0000 80 chr7:75473134-75473214 1.0000 80 chr20:46768438-46768518 1.0000 80 chr8:29952229-29952309 1.0000 80 chr7:75473334-75473414 1.0000 80 chr3:37866026-37866106 1.0000 80 chr8:29995092-29995172 1.0000 80 chr2:12223990-12224070 1.0000 80 chr7:128429916-128429996 1.0000 80 chr2:65028000-65028080 1.0000 80 chr12:9185011-9185091 1.0000 80 chr14:31711904-31711984 1.0000 80 chr1:55417642-55417722 1.0000 80 chr21:47939290-47939370 1.0000 80 chr15:45876405-45876485 1.0000 80 chr16:77773574-77773654 1.0000 80 chr2:231519557-231519637 1.0000 80 chr11:59383559-59383639 1.0000 80 chr15:75433013-75433093 1.0000 80 chr5:168007921-168008001 1.0000 80 chr7:16458934-16459014 1.0000 80 chr19:21793729-21793809 1.0000 80 chr6:36852515-36852595 1.0000 80 chr3:4780473-4780553 1.0000 80 chr6:37396477-37396557 1.0000 80 chr6:158176293-158176373 1.0000 80 chr6:30805749-30805829 1.0000 80 chr11:76764441-76764521 1.0000 80 chr6:134343865-134343945 1.0000 80 chr1:155277137-155277217 1.0000 80 chr9:101836363-101836443 1.0000 80 chr6:39967568-39967648 1.0000 80 chr5:39150241-39150321 1.0000 80 chr6:10662540-10662620 1.0000 80 chr15:68212988-68213068 1.0000 80 chr22:19935199-19935279 1.0000 80 chr8:22808301-22808381 1.0000 80 chr5:90587921-90588001 1.0000 80 chr5:68387005-68387085 1.0000 80 chr14:103017345-10301742 1.0000 80 chr21:44391179-44391259 1.0000 80 chr5:36442527-36442607 1.0000 80 chrX:16949715-16949795 1.0000 80 chr15:68316391-68316471 1.0000 80 chr6:134612492-134612572 1.0000 80 chr11:86648399-86648479 1.0000 80 chrX:16949915-16949995 1.0000 80 chr6:164758831-164758911 1.0000 80 chr10:52085417-52085497 1.0000 80 chr16:88366644-88366724 1.0000 80 chr16:4294281-4294361 1.0000 80 chr6:53223799-53223879 1.0000 80 chr15:90325489-90325569 1.0000 80 chr1:18770226-18770306 1.0000 80 chr7:2996635-2996715 1.0000 80 chr2:20776439-20776519 1.0000 80 chr7:139615682-139615762 1.0000 80 chr15:23161810-23161890 1.0000 80 chr10:29100740-29100820 1.0000 80 chr19:35808692-35808772 1.0000 80 chr8:135722449-135722529 1.0000 80 chr4:110691308-110691388 1.0000 80 chr11:57679174-57679254 1.0000 80 chr2:28887063-28887143 1.0000 80 chrX:13122327-13122407 1.0000 80 chr6:2980137-2980217 1.0000 80 chr16:31033613-31033693 1.0000 80 chrX:13122125-13122205 1.0000 80 chr19:46081273-46081353 1.0000 80 chr1:62432727-62432807 1.0000 80 chr2:120096539-120096619 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_CREB3/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/CREB3.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.277 C 0.231 G 0.233 T 0.259 Background letter frequencies (from file dataset with add-one prior applied): A 0.276 C 0.231 G 0.233 T 0.259 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TCCATCTT MEME-1 width = 8 sites = 92 llr = 882 E-value = 1.9e-122 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::a:::: pos.-specific C :9a::8:: probability G :::::::: matrix T 9:::a2aa bits 2.1 * 1.9 ** ** 1.7 **** ** 1.5 ***** ** Relative 1.3 ***** ** Entropy 1.1 ******** (13.8 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCCATCTT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:46081273-46081353 44 1.53e-05 cttgactgac tccatctt acttccaacc chr6:2980137-2980217 43 1.53e-05 ccagacctac tccatctt gaatatgggt chr10:29100740-29100820 23 1.53e-05 ctagagcgac tccatctt gaatagaggc chr15:90325489-90325569 58 1.53e-05 ccagagcgat tccatctt gaataggggc chr6:164758831-164758911 42 1.53e-05 ccagagcgac tccatctt gaataggggc chr11:86648399-86648479 35 1.53e-05 ccagagcaac tccatctt gagtaggggc chr21:44391179-44391259 57 1.53e-05 ccaaagcgac tccatctt gaatagcgac chr15:68212988-68213068 41 1.53e-05 ccagagcaac tccatctt gaatagggct chr6:10662540-10662620 23 1.53e-05 ccagagcgac tccatctt gaataggggc chr1:155277137-155277217 22 1.53e-05 ccagagcaac tccatctt gaatagggac chr7:16458934-16459014 23 1.53e-05 cctaactaac tccatctt gcttctaacc chr5:168007921-168008001 39 1.53e-05 ccagagcgac tccatctt gaatagggat chr2:231519557-231519637 47 1.53e-05 ccacagcaac tccatctt gattaggagc chr1:55417642-55417722 73 1.53e-05 ccagagcaat tccatctt chr7:128429916-128429996 5 1.53e-05 caac tccatctt gaatagaagc chr2:12223990-12224070 32 1.53e-05 ccatagtgac tccatctt gaatagggac chr16:26981063-26981143 29 1.53e-05 ccagagcgac tccatctt aaataggggc chr19:49385475-49385555 54 1.53e-05 CAGGGGCGAC TCCATCtt gaacaggggc chr9:33703601-33703681 41 1.53e-05 ccagagcaac tccatctt aagtaggagc chrX:16604164-16604244 58 1.53e-05 ccagagtgac tccatctt gaataggggc chr19:29019553-29019633 32 1.53e-05 ccagaacaac tccatctt gaataggagc chr1:173391905-173391985 73 1.53e-05 CAAGACTTCT TCCATCTT chr20:5615704-5615784 52 1.53e-05 ccagagcaac tccatctt gaatatgagc chr16:50491942-50492022 61 1.53e-05 ccagagcgac tccatctt gaatagaggc chr17:70758206-70758286 42 1.53e-05 caagagcaac tccatctt gaataggggc chr11:61781521-61781601 39 1.53e-05 ccagagcaac tccatctt gaataggggc chr7:135594152-135594232 47 1.53e-05 ccagagcaac tccatctt gaataggagc chr4:165972075-165972155 66 1.53e-05 ccagagcaac tccatctt gagtagg chr3:127451786-127451866 42 1.53e-05 ccagagcaac tccatctt gaacgggggc chr10:33345933-33346013 38 1.53e-05 ccagagtgac tccatctt gaatagggct chr11:61407393-61407473 18 1.53e-05 ccagagcaac tccatctt gaatagaggc chr9:80507968-80508048 51 1.53e-05 ccagagcgac tccatctt gaagtcactg chr12:110488104-11048818 72 1.53e-05 ccagagcaac tccatctt a chr3:69063896-69063976 48 1.53e-05 ccggagcaac tccatctt aaataggagc chr7:73574329-73574409 67 1.53e-05 caagagcagc tccatctt gaatag chr1:227038662-227038742 1 1.53e-05 . tccatctt gaataagagc chr2:69961394-69961474 44 1.53e-05 catagctgac tccatctt gcttctgacc chr7:22219119-22219199 22 1.53e-05 ccagagtgac tccatctt gaataggggc chr22:39168006-39168086 44 1.53e-05 ccagagcaac tccatctt gaataggagc chr18:53615344-53615424 15 1.53e-05 ccagagcaac tccatctt gaataggagc chr5:132307660-132307740 47 1.53e-05 acagagagac tccatctt gactacgggc chr20:5726863-5726943 44 1.53e-05 cctaactgac tccatctt gcttctaacc chr20:1182813-1182893 38 1.53e-05 ccagagtaac tccatctt gaataggggc chr19:33177929-33178009 24 1.53e-05 ccagagcaac tccatctt gtataggggc chr3:189744062-189744142 6 1.53e-05 gcaac tccatctt gagtagtggc chr5:112368292-112368372 50 1.53e-05 ccagagcaac tccatctt aaataggagt chr7:150019263-150019343 65 1.53e-05 ccagaattac tccatctt gaataagg chr10:44479452-44479532 11 1.53e-05 cttaactaac tccatctt agaaaaaggc chr4:38319040-38319120 51 1.53e-05 ccagagcaac tccatctt gaataggggc chr3:44509774-44509854 35 1.53e-05 cttaactaac tccatctt gcttctaacc chr21:19062534-19062614 51 1.53e-05 ctagagtgac tccatctt gaatgggggc chr20:45264246-45264326 46 1.53e-05 ccagagtgac tccatctt gaacaggagc chr7:128540934-128541014 30 1.53e-05 ccagagcaac tccatctt aaataggagc chr2:125751527-125751607 37 1.53e-05 ccagagcaac tccatctt gaacagtgac chr1:161527712-161527792 27 1.53e-05 cataactaac tccatctt agaaaaagac chr3:112488704-112488784 27 1.53e-05 cttaactgac tccatctt gcttctaact chr1:17219552-17219632 42 1.53e-05 catggctgac tccatctt ggttctagcc chr7:30767724-30767804 57 1.53e-05 ccagagcaac tccatctt gaataggagc chr1:103120712-103120792 41 1.53e-05 ccagagctac tccatctt gaataggtgg chr3:58692290-58692370 37 1.53e-05 ccagagtgac tccatctt gaatagggac chr14:103017345-10301742 57 3.25e-05 ccagagcaac tccatttt gaataggggc chr12:9185011-9185091 1 3.25e-05 . tccatttt gcttctaagc chr1:116820565-116820645 21 3.25e-05 cattagtgac tccatttt gattttgaca chr1:173443568-173443648 64 3.25e-05 cataagaaac tccatttt gttctgaac chr20:49125564-49125644 44 3.25e-05 catgagtgac tccatttt gatttttagt chr10:28674893-28674973 16 3.25e-05 ccagagagac tccatttt gaataggggc chr5:56451044-56451124 25 3.25e-05 catgagtaac tccatttt tatttggtct chr9:100812789-100812869 44 3.25e-05 cacgagtgac tccatttt ggtttggttt chr14:94576121-94576201 6 3.25e-05 gtgac tccatttt gaatcttaca chr5:67924074-67924154 24 3.25e-05 ccagagcaac tccatttt gaatagaagc chr5:179946305-179946385 62 3.25e-05 cattagtcac tccatttt gatactgata chr9:101836363-101836443 62 4.79e-05 aaatgatggc tccatgtt cccttctctt chr12:70484862-70484942 69 4.79e-05 cttgagttac tccatgtt gctt chr9:102796289-102796369 43 4.79e-05 ccagagtgac tccatgtt gcataggggt chr3:40393378-40393458 44 4.79e-05 ccagagggac tccatgtt gaatagggtc chr16:17176613-17176693 72 6.42e-05 ttctttcatc accatctt g chr2:87816018-87816098 65 6.42e-05 cgtaagtgac accatctt agaaaaag chr7:139615682-139615762 22 8.14e-05 ATGTCTCTGC TTCATCTT GCTCATTTTC chr6:109745722-109745802 32 8.14e-05 ccacagcaac ttcatctt gaataggagc chr5:36442527-36442607 24 9.97e-05 tttgagttac tccatatt gctttgttcg chr6:20188912-20188992 37 9.97e-05 cttgagttac tccatatt gctttgttcc chr5:42991152-42991232 28 9.97e-05 CAATGGCAGT TCCATATT TCTTATCAGA chr16:17684940-17685020 56 1.13e-04 ccagagtgac cccatctt gaataagggc chr8:144631451-144631531 62 1.27e-04 ccagagttga gccatctt aggcgaacac chr1:18770226-18770306 6 1.55e-04 taggc tccagctt ccctaacatt chr21:37451598-37451678 32 1.55e-04 AGCAGACTCA TCCACCTT GTCTCAGAGC chr15:68316391-68316471 63 1.73e-04 cagcatccct tacaTCTT CTGTCTGACT chr5:68387005-68387085 71 1.91e-04 tccaaactgc accatttt gt chr8:131674431-131674511 7 1.91e-04 GGTAAC ACCATTTT AAATCTTTTA chr10:50465413-50465493 14 2.10e-04 catgagtgac ttcatttt ggtttggtct chr5:43358599-43358679 53 2.10e-04 caaaagtaac ttcatttt ggtttgatct chr1:168302923-168303003 13 2.26e-04 aggtttcagc cccatttt acccagctcc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:46081273-46081353 1.5e-05 43_[+1]_29 chr6:2980137-2980217 1.5e-05 42_[+1]_30 chr10:29100740-29100820 1.5e-05 22_[+1]_50 chr15:90325489-90325569 1.5e-05 57_[+1]_15 chr6:164758831-164758911 1.5e-05 41_[+1]_31 chr11:86648399-86648479 1.5e-05 34_[+1]_38 chr21:44391179-44391259 1.5e-05 56_[+1]_16 chr15:68212988-68213068 1.5e-05 40_[+1]_32 chr6:10662540-10662620 1.5e-05 22_[+1]_50 chr1:155277137-155277217 1.5e-05 21_[+1]_51 chr7:16458934-16459014 1.5e-05 22_[+1]_50 chr5:168007921-168008001 1.5e-05 38_[+1]_34 chr2:231519557-231519637 1.5e-05 46_[+1]_26 chr1:55417642-55417722 1.5e-05 72_[+1] chr7:128429916-128429996 1.5e-05 4_[+1]_68 chr2:12223990-12224070 1.5e-05 31_[+1]_41 chr16:26981063-26981143 1.5e-05 28_[+1]_44 chr19:49385475-49385555 1.5e-05 53_[+1]_19 chr9:33703601-33703681 1.5e-05 40_[+1]_32 chrX:16604164-16604244 1.5e-05 57_[+1]_15 chr19:29019553-29019633 1.5e-05 31_[+1]_41 chr1:173391905-173391985 1.5e-05 72_[+1] chr20:5615704-5615784 1.5e-05 51_[+1]_21 chr16:50491942-50492022 1.5e-05 60_[+1]_12 chr17:70758206-70758286 1.5e-05 41_[+1]_31 chr11:61781521-61781601 1.5e-05 38_[+1]_34 chr7:135594152-135594232 1.5e-05 46_[+1]_26 chr4:165972075-165972155 1.5e-05 65_[+1]_7 chr3:127451786-127451866 1.5e-05 41_[+1]_31 chr10:33345933-33346013 1.5e-05 37_[+1]_35 chr11:61407393-61407473 1.5e-05 17_[+1]_55 chr9:80507968-80508048 1.5e-05 50_[+1]_22 chr12:110488104-11048818 1.5e-05 71_[+1]_1 chr3:69063896-69063976 1.5e-05 47_[+1]_25 chr7:73574329-73574409 1.5e-05 66_[+1]_6 chr1:227038662-227038742 1.5e-05 [+1]_72 chr2:69961394-69961474 1.5e-05 43_[+1]_29 chr7:22219119-22219199 1.5e-05 21_[+1]_51 chr22:39168006-39168086 1.5e-05 43_[+1]_29 chr18:53615344-53615424 1.5e-05 14_[+1]_58 chr5:132307660-132307740 1.5e-05 46_[+1]_26 chr20:5726863-5726943 1.5e-05 43_[+1]_29 chr20:1182813-1182893 1.5e-05 37_[+1]_35 chr19:33177929-33178009 1.5e-05 23_[+1]_49 chr3:189744062-189744142 1.5e-05 5_[+1]_67 chr5:112368292-112368372 1.5e-05 49_[+1]_23 chr7:150019263-150019343 1.5e-05 64_[+1]_8 chr10:44479452-44479532 1.5e-05 10_[+1]_62 chr4:38319040-38319120 1.5e-05 50_[+1]_22 chr3:44509774-44509854 1.5e-05 34_[+1]_38 chr21:19062534-19062614 1.5e-05 50_[+1]_22 chr20:45264246-45264326 1.5e-05 45_[+1]_27 chr7:128540934-128541014 1.5e-05 29_[+1]_43 chr2:125751527-125751607 1.5e-05 36_[+1]_36 chr1:161527712-161527792 1.5e-05 26_[+1]_46 chr3:112488704-112488784 1.5e-05 26_[+1]_46 chr1:17219552-17219632 1.5e-05 41_[+1]_31 chr7:30767724-30767804 1.5e-05 56_[+1]_16 chr1:103120712-103120792 1.5e-05 40_[+1]_32 chr3:58692290-58692370 1.5e-05 36_[+1]_36 chr14:103017345-10301742 3.2e-05 56_[+1]_16 chr12:9185011-9185091 3.2e-05 [+1]_72 chr1:116820565-116820645 3.2e-05 20_[+1]_52 chr1:173443568-173443648 3.2e-05 63_[+1]_9 chr20:49125564-49125644 3.2e-05 43_[+1]_29 chr10:28674893-28674973 3.2e-05 15_[+1]_57 chr5:56451044-56451124 3.2e-05 24_[+1]_48 chr9:100812789-100812869 3.2e-05 43_[+1]_29 chr14:94576121-94576201 3.2e-05 5_[+1]_67 chr5:67924074-67924154 3.2e-05 23_[+1]_49 chr5:179946305-179946385 3.2e-05 61_[+1]_11 chr9:101836363-101836443 4.8e-05 61_[+1]_11 chr12:70484862-70484942 4.8e-05 68_[+1]_4 chr9:102796289-102796369 4.8e-05 42_[+1]_30 chr3:40393378-40393458 4.8e-05 43_[+1]_29 chr16:17176613-17176693 6.4e-05 71_[+1]_1 chr2:87816018-87816098 6.4e-05 64_[+1]_8 chr7:139615682-139615762 8.1e-05 21_[+1]_51 chr6:109745722-109745802 8.1e-05 31_[+1]_41 chr5:36442527-36442607 0.0001 23_[+1]_49 chr6:20188912-20188992 0.0001 36_[+1]_36 chr5:42991152-42991232 0.0001 27_[+1]_45 chr16:17684940-17685020 0.00011 55_[+1]_17 chr8:144631451-144631531 0.00013 61_[+1]_11 chr1:18770226-18770306 0.00015 5_[+1]_67 chr21:37451598-37451678 0.00015 31_[+1]_41 chr15:68316391-68316471 0.00017 62_[+1]_10 chr5:68387005-68387085 0.00019 70_[+1]_2 chr8:131674431-131674511 0.00019 6_[+1]_66 chr10:50465413-50465493 0.00021 13_[+1]_59 chr5:43358599-43358679 0.00021 52_[+1]_20 chr1:168302923-168303003 0.00023 12_[+1]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCATCTT width=8 seqs=92 chr19:46081273-46081353 ( 44) TCCATCTT 1 chr6:2980137-2980217 ( 43) TCCATCTT 1 chr10:29100740-29100820 ( 23) TCCATCTT 1 chr15:90325489-90325569 ( 58) TCCATCTT 1 chr6:164758831-164758911 ( 42) TCCATCTT 1 chr11:86648399-86648479 ( 35) TCCATCTT 1 chr21:44391179-44391259 ( 57) TCCATCTT 1 chr15:68212988-68213068 ( 41) TCCATCTT 1 chr6:10662540-10662620 ( 23) TCCATCTT 1 chr1:155277137-155277217 ( 22) TCCATCTT 1 chr7:16458934-16459014 ( 23) TCCATCTT 1 chr5:168007921-168008001 ( 39) TCCATCTT 1 chr2:231519557-231519637 ( 47) TCCATCTT 1 chr1:55417642-55417722 ( 73) TCCATCTT 1 chr7:128429916-128429996 ( 5) TCCATCTT 1 chr2:12223990-12224070 ( 32) TCCATCTT 1 chr16:26981063-26981143 ( 29) TCCATCTT 1 chr19:49385475-49385555 ( 54) TCCATCTT 1 chr9:33703601-33703681 ( 41) TCCATCTT 1 chrX:16604164-16604244 ( 58) TCCATCTT 1 chr19:29019553-29019633 ( 32) TCCATCTT 1 chr1:173391905-173391985 ( 73) TCCATCTT 1 chr20:5615704-5615784 ( 52) TCCATCTT 1 chr16:50491942-50492022 ( 61) TCCATCTT 1 chr17:70758206-70758286 ( 42) TCCATCTT 1 chr11:61781521-61781601 ( 39) TCCATCTT 1 chr7:135594152-135594232 ( 47) TCCATCTT 1 chr4:165972075-165972155 ( 66) TCCATCTT 1 chr3:127451786-127451866 ( 42) TCCATCTT 1 chr10:33345933-33346013 ( 38) TCCATCTT 1 chr11:61407393-61407473 ( 18) TCCATCTT 1 chr9:80507968-80508048 ( 51) TCCATCTT 1 chr12:110488104-11048818 ( 72) TCCATCTT 1 chr3:69063896-69063976 ( 48) TCCATCTT 1 chr7:73574329-73574409 ( 67) TCCATCTT 1 chr1:227038662-227038742 ( 1) TCCATCTT 1 chr2:69961394-69961474 ( 44) TCCATCTT 1 chr7:22219119-22219199 ( 22) TCCATCTT 1 chr22:39168006-39168086 ( 44) TCCATCTT 1 chr18:53615344-53615424 ( 15) TCCATCTT 1 chr5:132307660-132307740 ( 47) TCCATCTT 1 chr20:5726863-5726943 ( 44) TCCATCTT 1 chr20:1182813-1182893 ( 38) TCCATCTT 1 chr19:33177929-33178009 ( 24) TCCATCTT 1 chr3:189744062-189744142 ( 6) TCCATCTT 1 chr5:112368292-112368372 ( 50) TCCATCTT 1 chr7:150019263-150019343 ( 65) TCCATCTT 1 chr10:44479452-44479532 ( 11) TCCATCTT 1 chr4:38319040-38319120 ( 51) TCCATCTT 1 chr3:44509774-44509854 ( 35) TCCATCTT 1 chr21:19062534-19062614 ( 51) TCCATCTT 1 chr20:45264246-45264326 ( 46) TCCATCTT 1 chr7:128540934-128541014 ( 30) TCCATCTT 1 chr2:125751527-125751607 ( 37) TCCATCTT 1 chr1:161527712-161527792 ( 27) TCCATCTT 1 chr3:112488704-112488784 ( 27) TCCATCTT 1 chr1:17219552-17219632 ( 42) TCCATCTT 1 chr7:30767724-30767804 ( 57) TCCATCTT 1 chr1:103120712-103120792 ( 41) TCCATCTT 1 chr3:58692290-58692370 ( 37) TCCATCTT 1 chr14:103017345-10301742 ( 57) TCCATTTT 1 chr12:9185011-9185091 ( 1) TCCATTTT 1 chr1:116820565-116820645 ( 21) TCCATTTT 1 chr1:173443568-173443648 ( 64) TCCATTTT 1 chr20:49125564-49125644 ( 44) TCCATTTT 1 chr10:28674893-28674973 ( 16) TCCATTTT 1 chr5:56451044-56451124 ( 25) TCCATTTT 1 chr9:100812789-100812869 ( 44) TCCATTTT 1 chr14:94576121-94576201 ( 6) TCCATTTT 1 chr5:67924074-67924154 ( 24) TCCATTTT 1 chr5:179946305-179946385 ( 62) TCCATTTT 1 chr9:101836363-101836443 ( 62) TCCATGTT 1 chr12:70484862-70484942 ( 69) TCCATGTT 1 chr9:102796289-102796369 ( 43) TCCATGTT 1 chr3:40393378-40393458 ( 44) TCCATGTT 1 chr16:17176613-17176693 ( 72) ACCATCTT 1 chr2:87816018-87816098 ( 65) ACCATCTT 1 chr7:139615682-139615762 ( 22) TTCATCTT 1 chr6:109745722-109745802 ( 32) TTCATCTT 1 chr5:36442527-36442607 ( 24) TCCATATT 1 chr6:20188912-20188992 ( 37) TCCATATT 1 chr5:42991152-42991232 ( 28) TCCATATT 1 chr16:17684940-17685020 ( 56) CCCATCTT 1 chr8:144631451-144631531 ( 62) GCCATCTT 1 chr1:18770226-18770306 ( 6) TCCAGCTT 1 chr21:37451598-37451678 ( 32) TCCACCTT 1 chr15:68316391-68316471 ( 63) TACATCTT 1 chr5:68387005-68387085 ( 71) ACCATTTT 1 chr8:131674431-131674511 ( 7) ACCATTTT 1 chr10:50465413-50465493 ( 14) TTCATTTT 1 chr5:43358599-43358679 ( 53) TTCATTTT 1 chr1:168302923-168303003 ( 13) CCCATTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.02908 E= 1.9e-122 -267 -341 -442 183 -467 204 -1317 -258 -1317 212 -1317 -1317 185 -1317 -1317 -1317 -1317 -440 -442 191 -308 170 -242 -58 -1317 -1317 -1317 195 -1317 -1317 -1317 195 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 92 E= 1.9e-122 0.043478 0.021739 0.010870 0.923913 0.010870 0.945652 0.000000 0.043478 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.010870 0.010870 0.978261 0.032609 0.750000 0.043478 0.173913 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCATCTT MEME-1 regular expression -------------------------------------------------------------------------------- TCCATCTT -------------------------------------------------------------------------------- Time 4.69 secs. ******************************************************************************** ******************************************************************************** MOTIF GATGGAGT MEME-2 width = 8 sites = 72 llr = 705 E-value = 1.6e-090 ******************************************************************************** -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 2a:::a:: pos.-specific C :::::::: probability G 8::aa:a: matrix T ::a::::9 bits 2.1 * 1.9 *** * 1.7 ******* 1.5 ******* Relative 1.3 ******** Entropy 1.1 ******** (14.1 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel GATGGAGT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr2:120096539-120096619 12 1.51e-05 cagtatccaa gatggagt tgctttggcc chr1:62432727-62432807 47 1.51e-05 tcctatttaa gatggagt tgctctggtt chrX:13122125-13122205 63 1.51e-05 ccctattcaa gatggagt cactccggtt chr5:68387005-68387085 15 1.51e-05 tcctattcaa gatggagt tgccccggtt chr5:90587921-90588001 60 1.51e-05 ccctattcaa gatggagt tgctatggtt chr6:158176293-158176373 17 1.51e-05 ctgtattcaa gatggagt tgctctggtt chr3:4780473-4780553 8 1.51e-05 ATGCCAT GATGGAGT TACCGCAGTT chr16:77773574-77773654 10 1.51e-05 cctattcaa gatggagt tgctctggtt chr15:45876405-45876485 25 1.51e-05 tcctattcaa gatggagt tgctctggct chr21:47939290-47939370 10 1.51e-05 cctattcaa gatggagt tgctctggtt chr14:31711904-31711984 13 1.51e-05 ccctatttaa gatggagt tgctctggtt chr3:37866026-37866106 45 1.51e-05 ccctattcaa gatggagt tgctctggtt chr20:46768438-46768518 45 1.51e-05 ccctattcaa gatggagt tgctctggtt chr7:75473134-75473214 46 1.51e-05 cctcactcaa gatggagt cactctggtt chr1:225654674-225654754 24 1.51e-05 ccctatacaa gatggagt tgctctggtt chr16:17176410-17176490 45 1.51e-05 ccctattcaa gatggagt cactctggtt chr1:166662601-166662681 22 1.51e-05 tcctattcaa gatggagt tgctttggtt chr10:4909320-4909400 58 1.51e-05 ttagaagcaa gatggagt cagttaagtt chr6:28454820-28454900 56 1.51e-05 ttagaagcaa gatggagt cagttaggtc chr1:9835312-9835392 6 1.51e-05 ttcaa gatggagt cgctctggtt chr6:89718637-89718717 25 1.51e-05 acctactcaa gatggagt cactctggtt chr11:3530964-3531044 44 1.51e-05 aaagagccaa gatggagt ctgtctggct chr5:95043438-95043518 30 1.51e-05 aaagagccaa gatggagt ctgtctggct chr2:104086445-104086525 24 1.51e-05 acttattcaa gatggagt tgctctggtt chr10:12307542-12307622 18 1.51e-05 tcctgtttaa gatggagt tgctctggtt chr7:106437327-106437407 34 1.51e-05 ttctattcaa gatggagt tgctccagtt chr18:71856621-71856701 38 1.51e-05 tcctattcaa gatggagt tgctctggtt chr21:34607579-34607659 44 1.51e-05 tgctactcaa gatggagt cactctggtt chr4:10245656-10245736 4 1.51e-05 caa gatggagt cagttaagtt chr10:13396622-13396702 19 1.51e-05 tcccattcaa gatggagt tgatctggtt chr9:100812096-100812176 25 1.51e-05 ccccattcaa gatggagt cactctagtt chr2:129201339-129201419 20 1.51e-05 ccctattcaa gatggagt tgctctggtt chr17:75084058-75084138 23 1.51e-05 ccctattcaa gatggagt tgctctggtt chr7:156716269-156716349 7 1.51e-05 atgtaa gatggagt ctttttctaa chr9:79041125-79041205 31 1.51e-05 ttaaaaggaa gatggagt tggtcaggtc chr17:25435138-25435218 36 1.51e-05 ttaaaggcaa gatggagt aggttaggtc chr1:168302923-168303003 38 1.51e-05 tcctattcaa gatggagt tgctcccgct chr8:30060532-30060612 23 1.51e-05 ctttttctaa gatggagt tagttatgtc chr6:49690248-49690328 27 1.51e-05 ccttatttaa gatggagt ttctctggtt chr12:113154069-11315414 30 1.51e-05 ctctacacaa gatggagt cactctggtt chr21:45204280-45204360 32 1.51e-05 tcctattcaa gatggagt cgctctggtt chr1:16843623-16843703 43 1.51e-05 ctagaaccaa gatggagt cagccatgtc chr7:156413036-156413116 39 1.51e-05 tcctgtttaa gatggagt tgctctggtt chr5:32562317-32562397 10 1.51e-05 tttttctaa gatggagt tacttatgtc chr7:41790752-41790832 45 1.51e-05 ccccattcaa gatggagt tgctctggtt chr3:112455760-112455840 37 1.51e-05 ttagaagcaa gatggagt cagttaagtt chr8:135722449-135722529 12 3.29e-05 CGTTTatcaa aatggagt cactcatgtc chr5:39150241-39150321 8 3.29e-05 aaatcaa aatggagt cacccacgct chr6:134343865-134343945 29 3.29e-05 ccaataccaa aatggagt cacttatgtc chr6:36852515-36852595 45 3.29e-05 accaaactaa aatggagt cactcatgct chr8:29952229-29952309 29 3.29e-05 aagaaaccaa aatggagt ctgtcccgct chr6:24401168-24401248 7 3.29e-05 gaacaa aatggagt ctcttatgtc chr6:34688089-34688169 44 3.29e-05 tacagaacaa aatggagt ctcctatgtc chr10:99177779-99177859 24 3.29e-05 tacaaaacaa aatggagt ctcctatgtc chr7:149261857-149261937 41 3.29e-05 tcagaatgaa aatggagt cacttgtgtt chr4:36759745-36759825 27 3.29e-05 cccctatcaa aatggagt tgccatggtt chr11:9341163-9341243 20 3.29e-05 tacagaacaa aatggagt ctcttatgtc chr19:43949718-43949798 32 3.29e-05 accaaaccaa aatggagt cactcgtgct chr1:211396306-211396386 64 3.29e-05 tacagaacaa aatggagt ctcttatgt chr7:23634955-23635035 27 3.29e-05 tcagaatcaa aatggagt cacttgtgtt chr1:161286277-161286357 48 3.29e-05 tacagattaa aatggagt ctcttatgtc chr19:35808692-35808772 69 4.63e-05 tgagtggagt gatggagc caga chr15:35992608-35992688 53 4.63e-05 ccctattcaa gatggagc tgctctggtg chr1:18770226-18770306 46 5.90e-05 atttcccaca ggtggagt ccattgtaca chr5:43358599-43358679 25 5.90e-05 gtttccgttt ggtggagt ggaacttcag chrX:16949915-16949995 19 7.40e-05 gataaaacag gatgcagt aaagaagccg chr20:36170910-36170990 21 1.00e-04 TTCACTTCAA GATGGCGT CACTCTTGCT chr1:223972457-223972537 16 1.00e-04 GAGAAAAAAA GATGGAGG CACAATGGTC chr1:1545373-1545453 23 1.16e-04 aaccctgaaa aatggagc caggaggcca chr5:36442527-36442607 64 1.52e-04 tgtgtcagga gatggaat tttccattg chr3:39067281-39067361 71 1.52e-04 cccaattcaa gatgaagt tt chr12:132038144-13203822 47 1.84e-04 ccctactcaa aatgcagt cactctggtt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:120096539-120096619 1.5e-05 11_[+2]_61 chr1:62432727-62432807 1.5e-05 46_[+2]_26 chrX:13122125-13122205 1.5e-05 62_[+2]_10 chr5:68387005-68387085 1.5e-05 14_[+2]_58 chr5:90587921-90588001 1.5e-05 59_[+2]_13 chr6:158176293-158176373 1.5e-05 16_[+2]_56 chr3:4780473-4780553 1.5e-05 7_[+2]_65 chr16:77773574-77773654 1.5e-05 9_[+2]_63 chr15:45876405-45876485 1.5e-05 24_[+2]_48 chr21:47939290-47939370 1.5e-05 9_[+2]_63 chr14:31711904-31711984 1.5e-05 12_[+2]_60 chr3:37866026-37866106 1.5e-05 44_[+2]_28 chr20:46768438-46768518 1.5e-05 44_[+2]_28 chr7:75473134-75473214 1.5e-05 45_[+2]_27 chr1:225654674-225654754 1.5e-05 23_[+2]_49 chr16:17176410-17176490 1.5e-05 44_[+2]_28 chr1:166662601-166662681 1.5e-05 21_[+2]_51 chr10:4909320-4909400 1.5e-05 57_[+2]_15 chr6:28454820-28454900 1.5e-05 55_[+2]_17 chr1:9835312-9835392 1.5e-05 5_[+2]_67 chr6:89718637-89718717 1.5e-05 24_[+2]_48 chr11:3530964-3531044 1.5e-05 43_[+2]_29 chr5:95043438-95043518 1.5e-05 29_[+2]_43 chr2:104086445-104086525 1.5e-05 23_[+2]_49 chr10:12307542-12307622 1.5e-05 17_[+2]_55 chr7:106437327-106437407 1.5e-05 33_[+2]_39 chr18:71856621-71856701 1.5e-05 37_[+2]_35 chr21:34607579-34607659 1.5e-05 43_[+2]_29 chr4:10245656-10245736 1.5e-05 3_[+2]_69 chr10:13396622-13396702 1.5e-05 18_[+2]_54 chr9:100812096-100812176 1.5e-05 24_[+2]_48 chr2:129201339-129201419 1.5e-05 19_[+2]_53 chr17:75084058-75084138 1.5e-05 22_[+2]_50 chr7:156716269-156716349 1.5e-05 6_[+2]_66 chr9:79041125-79041205 1.5e-05 30_[+2]_42 chr17:25435138-25435218 1.5e-05 35_[+2]_37 chr1:168302923-168303003 1.5e-05 37_[+2]_35 chr8:30060532-30060612 1.5e-05 22_[+2]_50 chr6:49690248-49690328 1.5e-05 26_[+2]_46 chr12:113154069-11315414 1.5e-05 29_[+2]_43 chr21:45204280-45204360 1.5e-05 31_[+2]_41 chr1:16843623-16843703 1.5e-05 42_[+2]_30 chr7:156413036-156413116 1.5e-05 38_[+2]_34 chr5:32562317-32562397 1.5e-05 9_[+2]_63 chr7:41790752-41790832 1.5e-05 44_[+2]_28 chr3:112455760-112455840 1.5e-05 36_[+2]_36 chr8:135722449-135722529 3.3e-05 11_[+2]_61 chr5:39150241-39150321 3.3e-05 7_[+2]_65 chr6:134343865-134343945 3.3e-05 28_[+2]_44 chr6:36852515-36852595 3.3e-05 44_[+2]_28 chr8:29952229-29952309 3.3e-05 28_[+2]_44 chr6:24401168-24401248 3.3e-05 6_[+2]_66 chr6:34688089-34688169 3.3e-05 43_[+2]_29 chr10:99177779-99177859 3.3e-05 23_[+2]_49 chr7:149261857-149261937 3.3e-05 40_[+2]_32 chr4:36759745-36759825 3.3e-05 26_[+2]_46 chr11:9341163-9341243 3.3e-05 19_[+2]_53 chr19:43949718-43949798 3.3e-05 31_[+2]_41 chr1:211396306-211396386 3.3e-05 63_[+2]_9 chr7:23634955-23635035 3.3e-05 26_[+2]_46 chr1:161286277-161286357 3.3e-05 47_[+2]_25 chr19:35808692-35808772 4.6e-05 68_[+2]_4 chr15:35992608-35992688 4.6e-05 52_[+2]_20 chr1:18770226-18770306 5.9e-05 45_[+2]_27 chr5:43358599-43358679 5.9e-05 24_[+2]_48 chrX:16949915-16949995 7.4e-05 18_[+2]_54 chr20:36170910-36170990 0.0001 20_[+2]_52 chr1:223972457-223972537 0.0001 15_[+2]_57 chr1:1545373-1545453 0.00012 22_[+2]_50 chr5:36442527-36442607 0.00015 63_[+2]_9 chr3:39067281-39067361 0.00015 70_[+2]_2 chr12:132038144-13203822 0.00018 46_[+2]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GATGGAGT width=8 seqs=72 chr2:120096539-120096619 ( 12) GATGGAGT 1 chr1:62432727-62432807 ( 47) GATGGAGT 1 chrX:13122125-13122205 ( 63) GATGGAGT 1 chr5:68387005-68387085 ( 15) GATGGAGT 1 chr5:90587921-90588001 ( 60) GATGGAGT 1 chr6:158176293-158176373 ( 17) GATGGAGT 1 chr3:4780473-4780553 ( 8) GATGGAGT 1 chr16:77773574-77773654 ( 10) GATGGAGT 1 chr15:45876405-45876485 ( 25) GATGGAGT 1 chr21:47939290-47939370 ( 10) GATGGAGT 1 chr14:31711904-31711984 ( 13) GATGGAGT 1 chr3:37866026-37866106 ( 45) GATGGAGT 1 chr20:46768438-46768518 ( 45) GATGGAGT 1 chr7:75473134-75473214 ( 46) GATGGAGT 1 chr1:225654674-225654754 ( 24) GATGGAGT 1 chr16:17176410-17176490 ( 45) GATGGAGT 1 chr1:166662601-166662681 ( 22) GATGGAGT 1 chr10:4909320-4909400 ( 58) GATGGAGT 1 chr6:28454820-28454900 ( 56) GATGGAGT 1 chr1:9835312-9835392 ( 6) GATGGAGT 1 chr6:89718637-89718717 ( 25) GATGGAGT 1 chr11:3530964-3531044 ( 44) GATGGAGT 1 chr5:95043438-95043518 ( 30) GATGGAGT 1 chr2:104086445-104086525 ( 24) GATGGAGT 1 chr10:12307542-12307622 ( 18) GATGGAGT 1 chr7:106437327-106437407 ( 34) GATGGAGT 1 chr18:71856621-71856701 ( 38) GATGGAGT 1 chr21:34607579-34607659 ( 44) GATGGAGT 1 chr4:10245656-10245736 ( 4) GATGGAGT 1 chr10:13396622-13396702 ( 19) GATGGAGT 1 chr9:100812096-100812176 ( 25) GATGGAGT 1 chr2:129201339-129201419 ( 20) GATGGAGT 1 chr17:75084058-75084138 ( 23) GATGGAGT 1 chr7:156716269-156716349 ( 7) GATGGAGT 1 chr9:79041125-79041205 ( 31) GATGGAGT 1 chr17:25435138-25435218 ( 36) GATGGAGT 1 chr1:168302923-168303003 ( 38) GATGGAGT 1 chr8:30060532-30060612 ( 23) GATGGAGT 1 chr6:49690248-49690328 ( 27) GATGGAGT 1 chr12:113154069-11315414 ( 30) GATGGAGT 1 chr21:45204280-45204360 ( 32) GATGGAGT 1 chr1:16843623-16843703 ( 43) GATGGAGT 1 chr7:156413036-156413116 ( 39) GATGGAGT 1 chr5:32562317-32562397 ( 10) GATGGAGT 1 chr7:41790752-41790832 ( 45) GATGGAGT 1 chr3:112455760-112455840 ( 37) GATGGAGT 1 chr8:135722449-135722529 ( 12) AATGGAGT 1 chr5:39150241-39150321 ( 8) AATGGAGT 1 chr6:134343865-134343945 ( 29) AATGGAGT 1 chr6:36852515-36852595 ( 45) AATGGAGT 1 chr8:29952229-29952309 ( 29) AATGGAGT 1 chr6:24401168-24401248 ( 7) AATGGAGT 1 chr6:34688089-34688169 ( 44) AATGGAGT 1 chr10:99177779-99177859 ( 24) AATGGAGT 1 chr7:149261857-149261937 ( 41) AATGGAGT 1 chr4:36759745-36759825 ( 27) AATGGAGT 1 chr11:9341163-9341243 ( 20) AATGGAGT 1 chr19:43949718-43949798 ( 32) AATGGAGT 1 chr1:211396306-211396386 ( 64) AATGGAGT 1 chr7:23634955-23635035 ( 27) AATGGAGT 1 chr1:161286277-161286357 ( 48) AATGGAGT 1 chr19:35808692-35808772 ( 69) GATGGAGC 1 chr15:35992608-35992688 ( 53) GATGGAGC 1 chr1:18770226-18770306 ( 46) GGTGGAGT 1 chr5:43358599-43358679 ( 25) GGTGGAGT 1 chrX:16949915-16949995 ( 19) GATGCAGT 1 chr20:36170910-36170990 ( 21) GATGGCGT 1 chr1:223972457-223972537 ( 16) GATGGAGG 1 chr1:1545373-1545453 ( 23) AATGGAGC 1 chr5:36442527-36442607 ( 64) GATGGAAT 1 chr3:39067281-39067361 ( 71) GATGAAGT 1 chr12:132038144-13203822 ( 47) AATGCAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.11479 E= 1.6e-090 -23 -1281 171 -1281 181 -1281 -307 -1281 -1281 -1281 -1281 195 -1281 -1281 210 -1281 -431 -305 204 -1281 183 -405 -1281 -1281 -431 -1281 208 -1281 -1281 -247 -407 186 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 72 E= 1.6e-090 0.236111 0.000000 0.763889 0.000000 0.972222 0.000000 0.027778 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.013889 0.027778 0.958333 0.000000 0.986111 0.013889 0.000000 0.000000 0.013889 0.000000 0.986111 0.000000 0.000000 0.041667 0.013889 0.944444 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATGGAGT MEME-2 regular expression -------------------------------------------------------------------------------- [GA]ATGGAGT -------------------------------------------------------------------------------- Time 8.17 secs. ******************************************************************************** ******************************************************************************** MOTIF AACCAGAG MEME-3 width = 8 sites = 64 llr = 605 E-value = 3.1e-066 ******************************************************************************** -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 Description -------------------------------------------------------------------------------- Simplified A 9a::a:a: pos.-specific C ::a9:::: probability G :::::9:a matrix T :::::::: bits 2.1 1.9 * * 1.7 ******* 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (13.6 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AACCAGAG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr15:90325489-90325569 46 1.68e-05 gaggtgtttg aaccagag cgattccatc chr10:52085417-52085497 31 1.68e-05 ACAAGTTTAG AACCAGAG TAGGGAGAAA chr6:164758831-164758911 30 1.68e-05 gaggtatttg aaccagag cgactccatc chr11:86648399-86648479 23 1.68e-05 gaggcgtctg aaccagag caactccatc chr14:103017345-10301742 45 1.68e-05 gaggcatttg aaccagag caactccatt chr15:68212988-68213068 29 1.68e-05 gaggcatttg aaccagag caactccatc chr6:10662540-10662620 11 1.68e-05 gagtcatttg aaccagag cgactccatc chr1:155277137-155277217 10 1.68e-05 aggtgcgtg aaccagag caactccatc chr11:76764441-76764521 66 1.68e-05 gaggcgttag aaccagag caactcc chr1:55417642-55417722 61 1.68e-05 gaagcatttg aaccagag caattccatc chr2:65028000-65028080 72 1.68e-05 gaggcgtttg aaccagag c chr16:26981063-26981143 17 1.68e-05 gaggtgttcg aaccagag cgactccatc chr1:11748693-11748773 63 1.68e-05 gaggtgtctg aaccagag caaccccatc chr9:33703601-33703681 29 1.68e-05 gagacatatg aaccagag caactccatc chrX:16604164-16604244 46 1.68e-05 gaggcatttg aaccagag tgactccatc chr16:17684940-17685020 44 1.68e-05 gaggcatttg aaccagag tgaccccatc chr20:5615704-5615784 40 1.68e-05 gaggcatttg aaccagag caactccatc chr16:50491942-50492022 49 1.68e-05 gaggcattcg aaccagag cgactccatc chr11:61781521-61781601 27 1.68e-05 gaggAgttcg aaccagag caactccatc chr7:135594152-135594232 35 1.68e-05 aaaagtgctt aaccagag caactccatc chr4:165972075-165972155 54 1.68e-05 gaggtgtctg aaccagag caactccatc chr3:127451786-127451866 30 1.68e-05 gaggcgtttg aaccagag caactccatc chr10:33345933-33346013 26 1.68e-05 gaggcattca aaccagag tgactccatc chr10:28674893-28674973 4 1.68e-05 ttg aaccagag agactccatt chr11:61407393-61407473 6 1.68e-05 gtttg aaccagag caactccatc chr9:80507968-80508048 39 1.68e-05 aagggtttca aaccagag cgactccatc chr12:110488104-11048818 60 1.68e-05 gaggcgtgtg aaccagag caactccatc chr22:39168006-39168086 32 1.68e-05 gaggcttgtg aaccagag caactccatc chr18:53615344-53615424 3 1.68e-05 tg aaccagag caactccatc chr20:1182813-1182893 26 1.68e-05 gtggcatttg aaccagag taactccatc chr19:33177929-33178009 12 1.68e-05 caggcgtttg aaccagag caactccatc chr5:112368292-112368372 38 1.68e-05 gaggcatgtg aaccagag caactccatc chr5:67924074-67924154 12 1.68e-05 gaggtgtttg aaccagag caactccatt chr7:92778234-92778314 65 1.68e-05 gagacattcg aaccagag tgactcca chr4:38319040-38319120 39 1.68e-05 gaagcgtttg aaccagag caactccatc chr1:95078482-95078562 70 1.68e-05 gagtcatgtg aaccagag caa chr20:45264246-45264326 34 1.68e-05 gaggcgtttg aaccagag tgactccatc chr7:128540934-128541014 18 1.68e-05 gaggcatttg aaccagag caactccatc chr2:125751527-125751607 25 1.68e-05 gaggtgtttt aaccagag caactccatc chr9:102796289-102796369 31 1.68e-05 gaggcgttca aaccagag tgactccatg chr7:30767724-30767804 45 1.68e-05 gaggtgtgtg aaccagag caactccatc chr1:103120712-103120792 29 1.68e-05 gagacgtttg aaccagag ctactccatc chr3:58692290-58692370 25 1.68e-05 aaggcacttg aaccagag tgactccatc chr10:29100740-29100820 11 3.57e-05 gagatgcttg aactagag cgactccatc chr5:56451044-56451124 7 3.57e-05 gcatgg aactagag catgagtaac chr21:19062534-19062614 39 3.57e-05 ggggcatttg aactagag tgactccatc chr8:135722449-135722529 47 6.40e-05 aacaaaatgg agccagag gataggaagg chr16:17176613-17176693 34 6.40e-05 cagtgaggat gaccagag gtcactttca chr8:144631451-144631531 50 6.40e-05 gcaccacagg gaccagag ttgagccatc chr7:22219119-22219199 10 6.40e-05 aggcatttg agccagag tgactccatc chr5:168007921-168008001 27 7.98e-05 cagaggcatt taccagag cgactccatc chr3:40393378-40393458 32 7.98e-05 gagatgtttg taccagag ggactccatg chr2:231519557-231519637 35 9.65e-05 aaggcgtttg aaccacag caactccatc chr6:109745722-109745802 20 9.65e-05 gaggcacgtg aaccacag caacttcatc chr17:70758206-70758286 30 1.17e-04 gaggcgttgg aacaagag caactccatc chr7:73574329-73574409 55 1.17e-04 gaggcgttca aacaagag cagctccatc chr1:9835312-9835392 65 1.45e-04 ctcgttcgta aaccaggg acaCCCCC chr3:69063896-69063976 36 1.45e-04 gaggcatgtg aaccggag caactccatc chr6:2980137-2980217 31 1.62e-04 gaggcatttg aaccagac ctactccatc chrX:30992052-30992132 20 1.79e-04 AATTCAACCC AAGCAGAG GCTCAAAAGC chr21:44391179-44391259 45 2.56e-04 ggggcatttg aaccaaag cgactccatc chr2:12223990-12224070 20 2.56e-04 gaggcctttg aaccatag tgactccatc chr19:29019553-29019633 20 2.56e-04 gaggtttgtg aaccagaa caactccatc chr1:17219552-17219632 16 2.56e-04 aaattatgac aatcagag aaagctgaca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:90325489-90325569 1.7e-05 45_[+3]_27 chr10:52085417-52085497 1.7e-05 30_[+3]_42 chr6:164758831-164758911 1.7e-05 29_[+3]_43 chr11:86648399-86648479 1.7e-05 22_[+3]_50 chr14:103017345-10301742 1.7e-05 44_[+3]_28 chr15:68212988-68213068 1.7e-05 28_[+3]_44 chr6:10662540-10662620 1.7e-05 10_[+3]_62 chr1:155277137-155277217 1.7e-05 9_[+3]_63 chr11:76764441-76764521 1.7e-05 65_[+3]_7 chr1:55417642-55417722 1.7e-05 60_[+3]_12 chr2:65028000-65028080 1.7e-05 71_[+3]_1 chr16:26981063-26981143 1.7e-05 16_[+3]_56 chr1:11748693-11748773 1.7e-05 62_[+3]_10 chr9:33703601-33703681 1.7e-05 28_[+3]_44 chrX:16604164-16604244 1.7e-05 45_[+3]_27 chr16:17684940-17685020 1.7e-05 43_[+3]_29 chr20:5615704-5615784 1.7e-05 39_[+3]_33 chr16:50491942-50492022 1.7e-05 48_[+3]_24 chr11:61781521-61781601 1.7e-05 26_[+3]_46 chr7:135594152-135594232 1.7e-05 34_[+3]_38 chr4:165972075-165972155 1.7e-05 53_[+3]_19 chr3:127451786-127451866 1.7e-05 29_[+3]_43 chr10:33345933-33346013 1.7e-05 25_[+3]_47 chr10:28674893-28674973 1.7e-05 3_[+3]_69 chr11:61407393-61407473 1.7e-05 5_[+3]_67 chr9:80507968-80508048 1.7e-05 38_[+3]_34 chr12:110488104-11048818 1.7e-05 59_[+3]_13 chr22:39168006-39168086 1.7e-05 31_[+3]_41 chr18:53615344-53615424 1.7e-05 2_[+3]_70 chr20:1182813-1182893 1.7e-05 25_[+3]_47 chr19:33177929-33178009 1.7e-05 11_[+3]_61 chr5:112368292-112368372 1.7e-05 37_[+3]_35 chr5:67924074-67924154 1.7e-05 11_[+3]_61 chr7:92778234-92778314 1.7e-05 64_[+3]_8 chr4:38319040-38319120 1.7e-05 38_[+3]_34 chr1:95078482-95078562 1.7e-05 69_[+3]_3 chr20:45264246-45264326 1.7e-05 33_[+3]_39 chr7:128540934-128541014 1.7e-05 17_[+3]_55 chr2:125751527-125751607 1.7e-05 24_[+3]_48 chr9:102796289-102796369 1.7e-05 30_[+3]_42 chr7:30767724-30767804 1.7e-05 44_[+3]_28 chr1:103120712-103120792 1.7e-05 28_[+3]_44 chr3:58692290-58692370 1.7e-05 24_[+3]_48 chr10:29100740-29100820 3.6e-05 10_[+3]_62 chr5:56451044-56451124 3.6e-05 6_[+3]_66 chr21:19062534-19062614 3.6e-05 38_[+3]_34 chr8:135722449-135722529 6.4e-05 46_[+3]_26 chr16:17176613-17176693 6.4e-05 33_[+3]_39 chr8:144631451-144631531 6.4e-05 49_[+3]_23 chr7:22219119-22219199 6.4e-05 9_[+3]_63 chr5:168007921-168008001 8e-05 26_[+3]_46 chr3:40393378-40393458 8e-05 31_[+3]_41 chr2:231519557-231519637 9.6e-05 34_[+3]_38 chr6:109745722-109745802 9.6e-05 19_[+3]_53 chr17:70758206-70758286 0.00012 29_[+3]_43 chr7:73574329-73574409 0.00012 54_[+3]_18 chr1:9835312-9835392 0.00014 64_[+3]_8 chr3:69063896-69063976 0.00014 35_[+3]_37 chr6:2980137-2980217 0.00016 30_[+3]_42 chrX:30992052-30992132 0.00018 19_[+3]_53 chr21:44391179-44391259 0.00026 44_[+3]_28 chr2:12223990-12224070 0.00026 19_[+3]_53 chr19:29019553-29019633 0.00026 19_[+3]_53 chr1:17219552-17219632 0.00026 15_[+3]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AACCAGAG width=8 seqs=64 chr15:90325489-90325569 ( 46) AACCAGAG 1 chr10:52085417-52085497 ( 31) AACCAGAG 1 chr6:164758831-164758911 ( 30) AACCAGAG 1 chr11:86648399-86648479 ( 23) AACCAGAG 1 chr14:103017345-10301742 ( 45) AACCAGAG 1 chr15:68212988-68213068 ( 29) AACCAGAG 1 chr6:10662540-10662620 ( 11) AACCAGAG 1 chr1:155277137-155277217 ( 10) AACCAGAG 1 chr11:76764441-76764521 ( 66) AACCAGAG 1 chr1:55417642-55417722 ( 61) AACCAGAG 1 chr2:65028000-65028080 ( 72) AACCAGAG 1 chr16:26981063-26981143 ( 17) AACCAGAG 1 chr1:11748693-11748773 ( 63) AACCAGAG 1 chr9:33703601-33703681 ( 29) AACCAGAG 1 chrX:16604164-16604244 ( 46) AACCAGAG 1 chr16:17684940-17685020 ( 44) AACCAGAG 1 chr20:5615704-5615784 ( 40) AACCAGAG 1 chr16:50491942-50492022 ( 49) AACCAGAG 1 chr11:61781521-61781601 ( 27) AACCAGAG 1 chr7:135594152-135594232 ( 35) AACCAGAG 1 chr4:165972075-165972155 ( 54) AACCAGAG 1 chr3:127451786-127451866 ( 30) AACCAGAG 1 chr10:33345933-33346013 ( 26) AACCAGAG 1 chr10:28674893-28674973 ( 4) AACCAGAG 1 chr11:61407393-61407473 ( 6) AACCAGAG 1 chr9:80507968-80508048 ( 39) AACCAGAG 1 chr12:110488104-11048818 ( 60) AACCAGAG 1 chr22:39168006-39168086 ( 32) AACCAGAG 1 chr18:53615344-53615424 ( 3) AACCAGAG 1 chr20:1182813-1182893 ( 26) AACCAGAG 1 chr19:33177929-33178009 ( 12) AACCAGAG 1 chr5:112368292-112368372 ( 38) AACCAGAG 1 chr5:67924074-67924154 ( 12) AACCAGAG 1 chr7:92778234-92778314 ( 65) AACCAGAG 1 chr4:38319040-38319120 ( 39) AACCAGAG 1 chr1:95078482-95078562 ( 70) AACCAGAG 1 chr20:45264246-45264326 ( 34) AACCAGAG 1 chr7:128540934-128541014 ( 18) AACCAGAG 1 chr2:125751527-125751607 ( 25) AACCAGAG 1 chr9:102796289-102796369 ( 31) AACCAGAG 1 chr7:30767724-30767804 ( 45) AACCAGAG 1 chr1:103120712-103120792 ( 29) AACCAGAG 1 chr3:58692290-58692370 ( 25) AACCAGAG 1 chr10:29100740-29100820 ( 11) AACTAGAG 1 chr5:56451044-56451124 ( 7) AACTAGAG 1 chr21:19062534-19062614 ( 39) AACTAGAG 1 chr8:135722449-135722529 ( 47) AGCCAGAG 1 chr16:17176613-17176693 ( 34) GACCAGAG 1 chr8:144631451-144631531 ( 50) GACCAGAG 1 chr7:22219119-22219199 ( 10) AGCCAGAG 1 chr5:168007921-168008001 ( 27) TACCAGAG 1 chr3:40393378-40393458 ( 32) TACCAGAG 1 chr2:231519557-231519637 ( 35) AACCACAG 1 chr6:109745722-109745802 ( 20) AACCACAG 1 chr17:70758206-70758286 ( 30) AACAAGAG 1 chr7:73574329-73574409 ( 55) AACAAGAG 1 chr1:9835312-9835392 ( 65) AACCAGGG 1 chr3:69063896-69063976 ( 36) AACCGGAG 1 chr6:2980137-2980217 ( 31) AACCAGAC 1 chrX:30992052-30992132 ( 20) AAGCAGAG 1 chr21:44391179-44391259 ( 45) AACCAAAG 1 chr2:12223990-12224070 ( 20) AACCATAG 1 chr19:29019553-29019633 ( 20) AACCAGAA 1 chr1:17219552-17219632 ( 16) AATCAGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.15054 E= 3.1e-066 176 -1264 -290 -305 181 -1264 -290 -1264 -1264 207 -390 -405 -314 200 -1264 -247 183 -1264 -390 -1264 -414 -288 201 -405 183 -1264 -390 -1264 -414 -388 205 -1264 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 64 E= 3.1e-066 0.937500 0.000000 0.031250 0.031250 0.968750 0.000000 0.031250 0.000000 0.000000 0.968750 0.015625 0.015625 0.031250 0.921875 0.000000 0.046875 0.984375 0.000000 0.015625 0.000000 0.015625 0.031250 0.937500 0.015625 0.984375 0.000000 0.015625 0.000000 0.015625 0.015625 0.968750 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AACCAGAG MEME-3 regular expression -------------------------------------------------------------------------------- AACCAGAG -------------------------------------------------------------------------------- Time 11.64 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTCTGAC MEME-4 width = 8 sites = 37 llr = 379 E-value = 1.2e-036 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::::91 pos.-specific C 9a:a:::9 probability G :::::a:: matrix T 1:a:a::: bits 2.1 * 1.9 ****** 1.7 ****** * 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (14.8 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCTCTGAC consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:62432727-62432807 71 1.23e-05 ggttcaaaca cctctgac aA chr16:31033613-31033693 2 1.23e-05 g cctctgac aTAGATACAA chr11:57679174-57679254 16 1.23e-05 ggttcacacg cctctgac aGAAGGAATG chr5:68387005-68387085 39 1.23e-05 ggttcaaacg cctctgac aACAGTTCtg chr6:158176293-158176373 41 1.23e-05 ggttcgcatg cctctgac aCCGGGAGAA chr16:77773574-77773654 34 1.23e-05 ggttcaaacg cctctgac aACACTTGGC chr15:45876405-45876485 49 1.23e-05 ggctcaaatg cctctgac aaggctacag chr21:47939290-47939370 34 1.23e-05 ggtttaaacg cctctgac atatttcccc chr14:31711904-31711984 37 1.23e-05 ggttcacagg cctctgac actacctccc chr3:37866026-37866106 69 1.23e-05 ggttcaaacg cctctgac aaga chr20:46768438-46768518 69 1.23e-05 ggttcaagtg cctctgac aatc chr1:225654674-225654754 48 1.23e-05 ggttcacacg cctctgac aCATGCAGTG chr1:166662601-166662681 46 1.23e-05 ggttcacacg cctctgac aCAGCTGCCC chr12:116774589-11677466 56 1.23e-05 TGCAATGACC CCTCTGAC TGTAGGTGGT chr4:36759745-36759825 51 1.23e-05 ggttcaaaca cctctgac ataatgaatc chr1:9835312-9835392 30 1.23e-05 ggttcaaatg cctctgac aaactgatct chr12:114022104-11402218 20 1.23e-05 ggtttaaacg cctctgac aatggggcct chr12:132036402-13203648 12 1.23e-05 ggttcgaaca cctctgac aTCAGGGTAG chr1:213860595-213860675 20 1.23e-05 ggtttgaatg cctctgac aatttccctg chr10:12307542-12307622 42 1.23e-05 ggttcaaacg cctctgac aAAGGGACAG chr18:71856621-71856701 62 1.23e-05 ggttcacatg cctctgac atctccactg chr21:34607579-34607659 68 1.23e-05 ggttccaaca cctctgac aAGAG chr10:13396622-13396702 43 1.23e-05 ggttcaaatg cctctgac aaagccacaa chr2:129201339-129201419 44 1.23e-05 ggttcacatg cctctgac GCTCCTGCGG chr6:49690248-49690328 51 1.23e-05 ggttcacaca cctctgac aaaaccatgc chr12:113154069-11315414 54 1.23e-05 ggtttgaatg cctctgac gatggggtac chr12:132038144-13203822 71 1.23e-05 ggttcaaacg cctctgac aA chr7:156413036-156413116 63 1.23e-05 ggttcacacg cctctgac aATACTACAA chr6:107278996-107279076 49 2.61e-05 actgagttgt tctctgac cttctaagaa chr7:41790752-41790832 69 2.61e-05 ggttcaaacg tctctgac agtg chr16:17176410-17176490 69 4.07e-05 ggttagagca cctctgaa aaag chr21:45204280-45204360 56 4.07e-05 ggttcaaaca cctctgaA CATGTTCATG chr7:75473134-75473214 70 6.14e-05 ggttctaacg cctctggc ata chr9:100812096-100812176 49 6.14e-05 agttcaaatg cctctgcc aCAGtgataa chr17:75084058-75084138 47 7.38e-05 ggttcaaacg cctctgaG ACAAGGTCCA chr2:69961394-69961474 53 1.02e-04 ctccatcttg cttctgac ctcacaagct chr6:145171193-145171273 29 1.02e-04 ATTTTTGCTC CCTCTAAC ATGGCAATCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:62432727-62432807 1.2e-05 70_[+4]_2 chr16:31033613-31033693 1.2e-05 1_[+4]_71 chr11:57679174-57679254 1.2e-05 15_[+4]_57 chr5:68387005-68387085 1.2e-05 38_[+4]_34 chr6:158176293-158176373 1.2e-05 40_[+4]_32 chr16:77773574-77773654 1.2e-05 33_[+4]_39 chr15:45876405-45876485 1.2e-05 48_[+4]_24 chr21:47939290-47939370 1.2e-05 33_[+4]_39 chr14:31711904-31711984 1.2e-05 36_[+4]_36 chr3:37866026-37866106 1.2e-05 68_[+4]_4 chr20:46768438-46768518 1.2e-05 68_[+4]_4 chr1:225654674-225654754 1.2e-05 47_[+4]_25 chr1:166662601-166662681 1.2e-05 45_[+4]_27 chr12:116774589-11677466 1.2e-05 55_[+4]_17 chr4:36759745-36759825 1.2e-05 50_[+4]_22 chr1:9835312-9835392 1.2e-05 29_[+4]_43 chr12:114022104-11402218 1.2e-05 19_[+4]_53 chr12:132036402-13203648 1.2e-05 11_[+4]_61 chr1:213860595-213860675 1.2e-05 19_[+4]_53 chr10:12307542-12307622 1.2e-05 41_[+4]_31 chr18:71856621-71856701 1.2e-05 61_[+4]_11 chr21:34607579-34607659 1.2e-05 67_[+4]_5 chr10:13396622-13396702 1.2e-05 42_[+4]_30 chr2:129201339-129201419 1.2e-05 43_[+4]_29 chr6:49690248-49690328 1.2e-05 50_[+4]_22 chr12:113154069-11315414 1.2e-05 53_[+4]_19 chr12:132038144-13203822 1.2e-05 70_[+4]_2 chr7:156413036-156413116 1.2e-05 62_[+4]_10 chr6:107278996-107279076 2.6e-05 48_[+4]_24 chr7:41790752-41790832 2.6e-05 68_[+4]_4 chr16:17176410-17176490 4.1e-05 68_[+4]_4 chr21:45204280-45204360 4.1e-05 55_[+4]_17 chr7:75473134-75473214 6.1e-05 69_[+4]_3 chr9:100812096-100812176 6.1e-05 48_[+4]_24 chr17:75084058-75084138 7.4e-05 46_[+4]_26 chr2:69961394-69961474 0.0001 52_[+4]_20 chr6:145171193-145171273 0.0001 28_[+4]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTCTGAC width=8 seqs=37 chr1:62432727-62432807 ( 71) CCTCTGAC 1 chr16:31033613-31033693 ( 2) CCTCTGAC 1 chr11:57679174-57679254 ( 16) CCTCTGAC 1 chr5:68387005-68387085 ( 39) CCTCTGAC 1 chr6:158176293-158176373 ( 41) CCTCTGAC 1 chr16:77773574-77773654 ( 34) CCTCTGAC 1 chr15:45876405-45876485 ( 49) CCTCTGAC 1 chr21:47939290-47939370 ( 34) CCTCTGAC 1 chr14:31711904-31711984 ( 37) CCTCTGAC 1 chr3:37866026-37866106 ( 69) CCTCTGAC 1 chr20:46768438-46768518 ( 69) CCTCTGAC 1 chr1:225654674-225654754 ( 48) CCTCTGAC 1 chr1:166662601-166662681 ( 46) CCTCTGAC 1 chr12:116774589-11677466 ( 56) CCTCTGAC 1 chr4:36759745-36759825 ( 51) CCTCTGAC 1 chr1:9835312-9835392 ( 30) CCTCTGAC 1 chr12:114022104-11402218 ( 20) CCTCTGAC 1 chr12:132036402-13203648 ( 12) CCTCTGAC 1 chr1:213860595-213860675 ( 20) CCTCTGAC 1 chr10:12307542-12307622 ( 42) CCTCTGAC 1 chr18:71856621-71856701 ( 62) CCTCTGAC 1 chr21:34607579-34607659 ( 68) CCTCTGAC 1 chr10:13396622-13396702 ( 43) CCTCTGAC 1 chr2:129201339-129201419 ( 44) CCTCTGAC 1 chr6:49690248-49690328 ( 51) CCTCTGAC 1 chr12:113154069-11315414 ( 54) CCTCTGAC 1 chr12:132038144-13203822 ( 71) CCTCTGAC 1 chr7:156413036-156413116 ( 63) CCTCTGAC 1 chr6:107278996-107279076 ( 49) TCTCTGAC 1 chr7:41790752-41790832 ( 69) TCTCTGAC 1 chr16:17176410-17176490 ( 69) CCTCTGAA 1 chr21:45204280-45204360 ( 56) CCTCTGAA 1 chr7:75473134-75473214 ( 70) CCTCTGGC 1 chr9:100812096-100812176 ( 49) CCTCTGCC 1 chr17:75084058-75084138 ( 47) CCTCTGAG 1 chr2:69961394-69961474 ( 53) CTTCTGAC 1 chr6:145171193-145171273 ( 29) CCTCTAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.1086 E= 1.2e-036 -1185 204 -1185 -226 -1185 208 -1185 -326 -1185 -1185 -1185 195 -1185 212 -1185 -1185 -1185 -1185 -1185 195 -335 -1185 206 -1185 177 -309 -311 -1185 -235 199 -311 -1185 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 37 E= 1.2e-036 0.000000 0.945946 0.000000 0.054054 0.000000 0.972973 0.000000 0.027027 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.027027 0.000000 0.972973 0.000000 0.945946 0.027027 0.027027 0.000000 0.054054 0.918919 0.027027 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTCTGAC MEME-4 regular expression -------------------------------------------------------------------------------- CCTCTGAC -------------------------------------------------------------------------------- Time 14.97 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTCAGAG MEME-5 width = 8 sites = 60 llr = 520 E-value = 1.2e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::a292 pos.-specific C 1::9:::: probability G :9:::818 matrix T a:a1:::: bits 2.1 1.9 * 1.7 ***** 1.5 ***** Relative 1.3 ******** Entropy 1.1 ******** (12.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGTCAGAG consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:2980137-2980217 16 1.49e-05 TCTATACTTT tgtcagag gcatttgaac chr11:86648399-86648479 8 1.49e-05 ATAGAAT tgtcagag gcgtctgaac chrX:16949715-16949795 52 1.49e-05 gagcccaagc tgtcagag gcatttgagc chr14:103017345-10301742 30 1.49e-05 TGATTCTGGC tgtcagag gcatttgaac chr15:68212988-68213068 14 1.49e-05 agcatgatgt tgtcagag gcatttgaac chr11:76764441-76764521 51 1.49e-05 CAGGTCTCTC tgtcagag gcgttagaac chr6:37396477-37396557 57 1.49e-05 gtgcctggcc tgtcagag ttttaaacat chr5:168007921-168008001 14 1.49e-05 atagcaactg tgtcagag gcatttacca chr2:65028000-65028080 57 1.49e-05 CCAGTATTTT tgtcagag gcgtttgaac chr2:12223990-12224070 5 1.49e-05 AAAA tgtcagag gcctttgaac chr16:26981063-26981143 2 1.49e-05 t tgtcagag gtgttcgaac chr9:33703601-33703681 14 1.49e-05 AGGGTGGATT tgtcagag acatatgaac chr19:29019553-29019633 5 1.49e-05 gaaa tgtcagag gtttgtgaac chr16:17684940-17685020 29 1.49e-05 AGGTTAGTAC tgtcagag gcatttgaac chr20:5615704-5615784 25 1.49e-05 GCATTCCTTC tgtcagag gcatttgaac chr10:33345933-33346013 11 1.49e-05 tgagtcacca tgtcagag gcattcaaac chr12:110488104-11048818 45 1.49e-05 GCAATACAAA tgtcagag gcgtgtgaac chr7:73574329-73574409 40 1.49e-05 TGAGCCCAGT tgtcagag gcgttcaaac chr22:39168006-39168086 17 1.49e-05 GCTGTTGTCA tgtcagag gcttgtgaac chr5:112368292-112368372 23 1.49e-05 TGTTTAATGC tgtcagag gcatgtgaac chr7:150019263-150019343 38 1.49e-05 TTTGCCCCAG tgtcagag gtgtttaagc chr7:92778234-92778314 50 1.49e-05 accctgATAA tgtcagag acattcgaac chr20:45264246-45264326 19 1.49e-05 tgggacctac tgtcagag gcgtttgaac chr7:128540934-128541014 3 1.49e-05 aa tgtcagag gcatttgaac chr9:102796289-102796369 16 1.49e-05 aggtcaactc tgtcagag gcgttcaaac chr7:30767724-30767804 30 1.49e-05 ttcccccttc tgtcagag gtgtgtgaac chr21:44391179-44391259 30 2.75e-05 ATAGTGCATC tgtcaggg gcatttgaac chr7:105824537-105824617 63 2.75e-05 tagctctgtt tgtcaggg ttttgacaca chr21:19062534-19062614 24 2.75e-05 CAAGTCCTCA tgtcaggg gcatttgaac chr2:231519557-231519637 20 6.29e-05 TGAATGAAGC tgtcaaag gcgtttgaac chr1:55417642-55417722 46 6.29e-05 GAAGCAGTAC tgtcagaa gcatttgaac chr7:149261857-149261937 29 6.29e-05 ctgtgaaagt tgtcagaa tgaaaatgga chr9:80507968-80508048 24 6.29e-05 AGGGTCATGA tgtcaaag ggtttcaaac chr7:23634955-23635035 15 6.29e-05 atgtgaaaat tgtcagaa tcaaaatgga chr4:38319040-38319120 24 6.29e-05 GAAGCCATTG tgtcagaa gcgtttgaac chr3:58692290-58692370 10 6.29e-05 agctcaaaa tgtcaaag gcacttgaac chr15:90325489-90325569 31 7.62e-05 CAGGTGGCAT Cgtcagag gtgtttgaac chr17:70758206-70758286 15 7.62e-05 CTGCTGTCAG Cgtcagag gcgttggaac chr4:165972075-165972155 39 7.62e-05 gaggtgggag cgtcagag gtgtctgaac chr1:11748693-11748773 48 9.30e-05 aggctcacat tgttagag gtgtctgaac chr5:132307660-132307740 21 9.30e-05 TTGCTGAAAT tgttagag gtgttccaac chr1:95078482-95078562 55 9.30e-05 GGAGTCTATG tgttagag tcatgtgaac chr3:195414162-195414242 66 1.06e-04 CTCCGCCCCC TGCCAGAG CATTACT chr3:127451786-127451866 15 1.06e-04 AGGGTGAGAG tgccagag gcgtttgaac chr19:49385475-49385555 14 1.21e-04 GCTGTGGTTT TCTCAGAG GCTTTCGAAA chr21:37451598-37451678 41 1.21e-04 ATCCACCTTG TCTCAGAG CAGCAGTGGC chr6:164758831-164758911 15 1.69e-04 TCCCTCTCTG tatcagag gtatttgaac chr5:36442527-36442607 56 1.69e-04 actgtgcatg tgtcagga gatggaattt chr6:109745722-109745802 5 1.69e-04 GTGG tatcagag gcacgtgaac chr1:65758550-65758630 70 1.69e-04 tcagctggga tgtcagga tca chr7:156716269-156716349 39 1.69e-04 gagtcactta tgtcaagg cgctctacac chr8:30060532-30060612 37 1.69e-04 gagttagtta tgtcaagg gtgctcaata chr5:32562317-32562397 24 1.69e-04 gagttactta tgtcaagg ttgccctaca chr6:134343865-134343945 43 2.04e-04 gagtcactta tgtcaaaa cacaaacaaa chr1:11748916-11748996 10 2.04e-04 aaggaagcc tgtcaaaa cccaccaaaa chr7:135594152-135594232 21 2.04e-04 aatttccaac tgtcaaaa gtgcttaacc chr20:1182813-1182893 11 2.04e-04 GGTGTGATGA tgtcagtg gcatttgaac chr1:211396508-211396588 15 2.18e-04 tcctaatgcc tgtcagac aaacttcctc chrX:16604164-16604244 31 2.50e-04 CACCTGACAT tgtgagag gcatttgaac chr2:87816018-87816098 20 2.50e-04 CTAAGGGAGC TGTCATAG GTTCTTCCCt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:2980137-2980217 1.5e-05 15_[+5]_57 chr11:86648399-86648479 1.5e-05 7_[+5]_65 chrX:16949715-16949795 1.5e-05 51_[+5]_21 chr14:103017345-10301742 1.5e-05 29_[+5]_43 chr15:68212988-68213068 1.5e-05 13_[+5]_59 chr11:76764441-76764521 1.5e-05 50_[+5]_22 chr6:37396477-37396557 1.5e-05 56_[+5]_16 chr5:168007921-168008001 1.5e-05 13_[+5]_59 chr2:65028000-65028080 1.5e-05 56_[+5]_16 chr2:12223990-12224070 1.5e-05 4_[+5]_68 chr16:26981063-26981143 1.5e-05 1_[+5]_71 chr9:33703601-33703681 1.5e-05 13_[+5]_59 chr19:29019553-29019633 1.5e-05 4_[+5]_68 chr16:17684940-17685020 1.5e-05 28_[+5]_44 chr20:5615704-5615784 1.5e-05 24_[+5]_48 chr10:33345933-33346013 1.5e-05 10_[+5]_62 chr12:110488104-11048818 1.5e-05 44_[+5]_28 chr7:73574329-73574409 1.5e-05 39_[+5]_33 chr22:39168006-39168086 1.5e-05 16_[+5]_56 chr5:112368292-112368372 1.5e-05 22_[+5]_50 chr7:150019263-150019343 1.5e-05 37_[+5]_35 chr7:92778234-92778314 1.5e-05 49_[+5]_23 chr20:45264246-45264326 1.5e-05 18_[+5]_54 chr7:128540934-128541014 1.5e-05 2_[+5]_70 chr9:102796289-102796369 1.5e-05 15_[+5]_57 chr7:30767724-30767804 1.5e-05 29_[+5]_43 chr21:44391179-44391259 2.8e-05 29_[+5]_43 chr7:105824537-105824617 2.8e-05 62_[+5]_10 chr21:19062534-19062614 2.8e-05 23_[+5]_49 chr2:231519557-231519637 6.3e-05 19_[+5]_53 chr1:55417642-55417722 6.3e-05 45_[+5]_27 chr7:149261857-149261937 6.3e-05 28_[+5]_44 chr9:80507968-80508048 6.3e-05 23_[+5]_49 chr7:23634955-23635035 6.3e-05 14_[+5]_58 chr4:38319040-38319120 6.3e-05 23_[+5]_49 chr3:58692290-58692370 6.3e-05 9_[+5]_63 chr15:90325489-90325569 7.6e-05 30_[+5]_42 chr17:70758206-70758286 7.6e-05 14_[+5]_58 chr4:165972075-165972155 7.6e-05 38_[+5]_34 chr1:11748693-11748773 9.3e-05 47_[+5]_25 chr5:132307660-132307740 9.3e-05 20_[+5]_52 chr1:95078482-95078562 9.3e-05 54_[+5]_18 chr3:195414162-195414242 0.00011 65_[+5]_7 chr3:127451786-127451866 0.00011 14_[+5]_58 chr19:49385475-49385555 0.00012 13_[+5]_59 chr21:37451598-37451678 0.00012 40_[+5]_32 chr6:164758831-164758911 0.00017 14_[+5]_58 chr5:36442527-36442607 0.00017 55_[+5]_17 chr6:109745722-109745802 0.00017 4_[+5]_68 chr1:65758550-65758630 0.00017 69_[+5]_3 chr7:156716269-156716349 0.00017 38_[+5]_34 chr8:30060532-30060612 0.00017 36_[+5]_36 chr5:32562317-32562397 0.00017 23_[+5]_49 chr6:134343865-134343945 0.0002 42_[+5]_30 chr1:11748916-11748996 0.0002 9_[+5]_63 chr7:135594152-135594232 0.0002 20_[+5]_52 chr20:1182813-1182893 0.0002 10_[+5]_62 chr1:211396508-211396588 0.00022 14_[+5]_58 chrX:16604164-16604244 0.00025 30_[+5]_42 chr2:87816018-87816098 0.00025 19_[+5]_53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTCAGAG width=8 seqs=60 chr6:2980137-2980217 ( 16) TGTCAGAG 1 chr11:86648399-86648479 ( 8) TGTCAGAG 1 chrX:16949715-16949795 ( 52) TGTCAGAG 1 chr14:103017345-10301742 ( 30) TGTCAGAG 1 chr15:68212988-68213068 ( 14) TGTCAGAG 1 chr11:76764441-76764521 ( 51) TGTCAGAG 1 chr6:37396477-37396557 ( 57) TGTCAGAG 1 chr5:168007921-168008001 ( 14) TGTCAGAG 1 chr2:65028000-65028080 ( 57) TGTCAGAG 1 chr2:12223990-12224070 ( 5) TGTCAGAG 1 chr16:26981063-26981143 ( 2) TGTCAGAG 1 chr9:33703601-33703681 ( 14) TGTCAGAG 1 chr19:29019553-29019633 ( 5) TGTCAGAG 1 chr16:17684940-17685020 ( 29) TGTCAGAG 1 chr20:5615704-5615784 ( 25) TGTCAGAG 1 chr10:33345933-33346013 ( 11) TGTCAGAG 1 chr12:110488104-11048818 ( 45) TGTCAGAG 1 chr7:73574329-73574409 ( 40) TGTCAGAG 1 chr22:39168006-39168086 ( 17) TGTCAGAG 1 chr5:112368292-112368372 ( 23) TGTCAGAG 1 chr7:150019263-150019343 ( 38) TGTCAGAG 1 chr7:92778234-92778314 ( 50) TGTCAGAG 1 chr20:45264246-45264326 ( 19) TGTCAGAG 1 chr7:128540934-128541014 ( 3) TGTCAGAG 1 chr9:102796289-102796369 ( 16) TGTCAGAG 1 chr7:30767724-30767804 ( 30) TGTCAGAG 1 chr21:44391179-44391259 ( 30) TGTCAGGG 1 chr7:105824537-105824617 ( 63) TGTCAGGG 1 chr21:19062534-19062614 ( 24) TGTCAGGG 1 chr2:231519557-231519637 ( 20) TGTCAAAG 1 chr1:55417642-55417722 ( 46) TGTCAGAA 1 chr7:149261857-149261937 ( 29) TGTCAGAA 1 chr9:80507968-80508048 ( 24) TGTCAAAG 1 chr7:23634955-23635035 ( 15) TGTCAGAA 1 chr4:38319040-38319120 ( 24) TGTCAGAA 1 chr3:58692290-58692370 ( 10) TGTCAAAG 1 chr15:90325489-90325569 ( 31) CGTCAGAG 1 chr17:70758206-70758286 ( 15) CGTCAGAG 1 chr4:165972075-165972155 ( 39) CGTCAGAG 1 chr1:11748693-11748773 ( 48) TGTTAGAG 1 chr5:132307660-132307740 ( 21) TGTTAGAG 1 chr1:95078482-95078562 ( 55) TGTTAGAG 1 chr3:195414162-195414242 ( 66) TGCCAGAG 1 chr3:127451786-127451866 ( 15) TGCCAGAG 1 chr19:49385475-49385555 ( 14) TCTCAGAG 1 chr21:37451598-37451678 ( 41) TCTCAGAG 1 chr6:164758831-164758911 ( 15) TATCAGAG 1 chr5:36442527-36442607 ( 56) TGTCAGGA 1 chr6:109745722-109745802 ( 5) TATCAGAG 1 chr1:65758550-65758630 ( 70) TGTCAGGA 1 chr7:156716269-156716349 ( 39) TGTCAAGG 1 chr8:30060532-30060612 ( 37) TGTCAAGG 1 chr5:32562317-32562397 ( 24) TGTCAAGG 1 chr6:134343865-134343945 ( 43) TGTCAAAA 1 chr1:11748916-11748996 ( 10) TGTCAAAA 1 chr7:135594152-135594232 ( 21) TGTCAAAA 1 chr20:1182813-1182893 ( 11) TGTCAGTG 1 chr1:211396508-211396588 ( 15) TGTCAGAC 1 chrX:16604164-16604244 ( 31) TGTGAGAG 1 chr2:87816018-87816098 ( 20) TGTCATAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.16875 E= 1.2e-037 -1255 -221 -1255 187 -305 -279 200 -1255 -1255 -279 -1255 190 -1255 202 -380 -237 185 -1255 -1255 -1255 -88 -1255 184 -396 162 -1255 -81 -396 -88 -379 184 -1255 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 60 E= 1.2e-037 0.000000 0.050000 0.000000 0.950000 0.033333 0.033333 0.933333 0.000000 0.000000 0.033333 0.000000 0.966667 0.000000 0.933333 0.016667 0.050000 1.000000 0.000000 0.000000 0.000000 0.150000 0.000000 0.833333 0.016667 0.850000 0.000000 0.133333 0.016667 0.150000 0.016667 0.833333 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTCAGAG MEME-5 regular expression -------------------------------------------------------------------------------- TGTCAGAG -------------------------------------------------------------------------------- Time 18.19 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:42991152-42991232 7.10e-03 27_[+1(9.97e-05)]_45 chr3:112455760-112455840 5.62e-02 36_[+2(1.51e-05)]_36 chr11:113061265-11306134 2.94e-01 80 chr3:39067281-39067361 1.58e-01 80 chr7:41790752-41790832 1.31e-03 44_[+2(1.51e-05)]_16_[+4(2.61e-05)]_\ 4 chr3:40393378-40393458 1.14e-03 31_[+3(7.98e-05)]_4_[+1(4.79e-05)]_\ 29 chr5:32562317-32562397 1.04e-03 9_[+2(1.51e-05)]_63 chr6:145171193-145171273 4.51e-02 80 chr11:75275236-75275316 4.71e-01 80 chr7:156413036-156413116 3.84e-04 38_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 10 chr3:58692290-58692370 2.24e-05 9_[+5(6.29e-05)]_7_[+3(1.68e-05)]_4_\ [+1(1.53e-05)]_36 chr1:103120712-103120792 4.24e-04 28_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 32 chr7:30767724-30767804 5.18e-07 29_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_16 chr9:102796289-102796369 9.10e-06 15_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(4.79e-05)]_30 chr1:17219552-17219632 6.50e-03 41_[+1(1.53e-05)]_31 chr1:16843623-16843703 2.29e-03 42_[+2(1.51e-05)]_30 chr3:112488704-112488784 9.00e-03 26_[+1(1.53e-05)]_46 chr13:27949002-27949082 6.62e-03 80 chr1:161527712-161527792 3.18e-02 26_[+1(1.53e-05)]_10_[+1(3.25e-05)]_\ 28 chr18:3607819-3607899 2.81e-01 80 chr12:132038144-13203822 4.41e-03 70_[+4(1.23e-05)]_2 chr12:47508430-47508510 1.37e-01 80 chr2:125751527-125751607 6.55e-04 24_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 36 chr3:43728853-43728933 7.04e-01 80 chr7:128540934-128541014 4.80e-06 2_[+5(1.49e-05)]_7_[+3(1.68e-05)]_4_\ [+1(1.53e-05)]_43 chr21:45204280-45204360 4.86e-04 31_[+2(1.51e-05)]_16_[+4(4.07e-05)]_\ 17 chr12:113154069-11315414 1.27e-03 29_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 19 chr11:75759901-75759981 2.74e-01 80 chr20:45264246-45264326 5.51e-06 18_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_27 chr21:19062534-19062614 1.02e-05 23_[+5(2.75e-05)]_7_[+3(3.57e-05)]_\ 4_[+1(1.53e-05)]_22 chr3:44509774-44509854 9.00e-03 34_[+1(1.53e-05)]_38 chr3:43729833-43729913 2.62e-01 80 chr1:161286277-161286357 1.37e-02 47_[+2(3.29e-05)]_25 chr5:171868450-171868530 6.33e-01 80 chr6:49690248-49690328 3.20e-04 26_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 22 chr1:95078482-95078562 1.61e-03 54_[+5(9.30e-05)]_7_[+3(1.68e-05)]_\ 3 chr8:30060532-30060612 1.91e-03 4_[+2(3.29e-05)]_10_[+2(1.51e-05)]_\ 50 chr1:168302923-168303003 9.05e-03 37_[+2(1.51e-05)]_35 chr6:110200956-110201036 4.40e-01 80 chr21:37451598-37451678 5.72e-03 80 chr4:38319040-38319120 1.98e-05 23_[+5(6.29e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_22 chr7:92778234-92778314 1.09e-03 49_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 8 chr5:179946305-179946385 8.48e-02 61_[+1(3.25e-05)]_11 chr5:67924074-67924154 1.49e-03 11_[+3(1.68e-05)]_4_[+1(3.25e-05)]_\ 49 chr10:72428415-72428495 5.08e-01 80 chr10:44479452-44479532 2.56e-02 10_[+1(1.53e-05)]_10_[+1(3.25e-05)]_\ 44 chr17:25435138-25435218 1.37e-02 35_[+2(1.51e-05)]_37 chr5:43358599-43358679 7.69e-03 24_[+2(5.90e-05)]_48 chr9:79041125-79041205 1.95e-02 30_[+2(1.51e-05)]_42 chr7:150019263-150019343 1.49e-04 37_[+5(1.49e-05)]_19_[+1(1.53e-05)]_\ 8 chr7:23634955-23635035 2.55e-03 14_[+5(6.29e-05)]_4_[+2(3.29e-05)]_\ 46 chr1:211396306-211396386 3.35e-03 63_[+2(3.29e-05)]_9 chr1:157298044-157298124 5.95e-01 80 chr18:3655785-3655865 2.76e-02 80 chrX:12968423-12968503 7.84e-01 80 chr7:156716269-156716349 2.55e-03 6_[+2(1.51e-05)]_10_[+2(1.51e-05)]_\ 48 chr17:75084058-75084138 1.71e-03 22_[+2(1.51e-05)]_16_[+4(7.38e-05)]_\ 26 chr14:96087115-96087195 7.76e-01 80 chr5:112368292-112368372 3.17e-06 22_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_23 chr5:67924281-67924361 3.15e-01 80 chr2:129201339-129201419 4.72e-04 19_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 29 chr17:37490259-37490339 8.11e-01 80 chr9:100812096-100812176 7.15e-04 24_[+2(1.51e-05)]_16_[+4(6.14e-05)]_\ 24 chr10:13396622-13396702 1.29e-04 18_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 30 chr19:43949718-43949798 2.73e-02 31_[+2(3.29e-05)]_41 chr3:189744062-189744142 3.19e-02 5_[+1(1.53e-05)]_67 chr7:105824537-105824617 8.55e-02 62_[+5(2.75e-05)]_10 chr4:10245656-10245736 5.99e-03 3_[+2(1.51e-05)]_69 chr14:94576121-94576201 1.94e-01 5_[+1(3.25e-05)]_67 chr12:70484862-70484942 6.36e-02 68_[+1(4.79e-05)]_4 chr1:156725467-156725547 8.73e-01 80 chr1:223972457-223972537 1.13e-01 80 chr21:34607579-34607659 1.00e-05 43_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 5 chr9:95876036-95876116 3.96e-01 80 chr6:20188912-20188992 9.24e-03 36_[+1(9.97e-05)]_36 chr18:71856621-71856701 1.97e-04 37_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 11 chr4:68568107-68568187 1.62e-01 80 chr7:106437327-106437407 1.81e-02 33_[+2(1.51e-05)]_39 chr10:12307542-12307622 3.01e-04 17_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 31 chr22:19935417-19935497 5.69e-01 80 chr1:65758550-65758630 1.83e-01 80 chr19:33177929-33178009 1.00e-03 11_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 49 chr2:104086445-104086525 1.93e-03 23_[+2(1.51e-05)]_49 chr1:213860595-213860675 6.93e-03 19_[+4(1.23e-05)]_53 chr6:15090271-15090351 7.18e-01 80 chr20:1182813-1182893 1.61e-05 25_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 35 chr10:50465413-50465493 6.76e-02 80 chr5:95043438-95043518 8.82e-03 29_[+2(1.51e-05)]_43 chr12:108514065-10851414 5.12e-01 80 chr12:132036402-13203648 5.65e-03 11_[+4(1.23e-05)]_61 chr20:5726863-5726943 7.22e-03 43_[+1(1.53e-05)]_29 chrX:30992052-30992132 2.20e-01 80 chr4:10185271-10185351 3.73e-01 80 chr5:132307660-132307740 7.98e-04 20_[+5(9.30e-05)]_18_[+1(1.53e-05)]_\ 26 chr18:53615344-53615424 1.18e-03 2_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 58 chr22:39168006-39168086 4.01e-06 16_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_29 chr1:179099141-179099221 1.23e-01 80 chr11:3530964-3531044 1.04e-02 43_[+2(1.51e-05)]_29 chr11:44551784-44551864 2.29e-01 80 chr7:22219119-22219199 2.21e-03 9_[+3(6.40e-05)]_4_[+1(1.53e-05)]_\ 51 chr5:65439444-65439524 5.80e-01 80 chr9:100812789-100812869 1.44e-01 43_[+1(3.25e-05)]_29 chr2:208657241-208657321 4.66e-01 80 chr2:69961394-69961474 1.99e-03 43_[+1(1.53e-05)]_29 chr6:147212309-147212389 3.98e-02 80 chr1:227038662-227038742 1.21e-02 [+1(1.53e-05)]_72 chr7:73574329-73574409 2.46e-06 39_[+5(1.49e-05)]_19_[+1(1.53e-05)]_\ 6 chr15:45840908-45840988 6.67e-01 80 chr6:89718637-89718717 8.13e-03 24_[+2(1.51e-05)]_48 chr4:166396998-166397078 5.15e-01 80 chr3:69063896-69063976 3.71e-05 47_[+1(1.53e-05)]_25 chr12:110488104-11048818 3.45e-06 44_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_1 chr15:35992608-35992688 4.11e-02 52_[+2(4.63e-05)]_20 chr5:56451044-56451124 2.07e-03 6_[+3(3.57e-05)]_10_[+1(3.25e-05)]_\ 48 chr1:142886480-142886560 6.44e-01 80 chr12:114022104-11402218 3.81e-02 19_[+4(1.23e-05)]_53 chr9:80507968-80508048 1.83e-05 23_[+5(6.29e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_22 chr11:61407393-61407473 1.32e-04 5_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 55 chr8:131674431-131674511 1.82e-02 80 chr10:28674893-28674973 2.46e-04 3_[+3(1.68e-05)]_4_[+1(3.25e-05)]_\ 57 chr10:33345933-33346013 2.04e-06 10_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_35 chr1:9835312-9835392 2.53e-05 5_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 43 chr11:9341163-9341243 2.83e-02 19_[+2(3.29e-05)]_53 chr6:28454820-28454900 2.14e-02 55_[+2(1.51e-05)]_17 chr2:87816018-87816098 5.36e-03 64_[+1(6.42e-05)]_8 chr1:211396508-211396588 1.95e-02 80 chr8:144631451-144631531 8.96e-04 49_[+3(6.40e-05)]_23 chr3:5030842-5030922 1.62e-01 80 chr3:5124061-5124141 3.77e-01 80 chr3:127451786-127451866 2.72e-05 29_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 31 chr4:165972075-165972155 6.01e-06 38_[+5(7.62e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_7 chr4:36759745-36759825 2.16e-04 26_[+2(3.29e-05)]_16_[+4(1.23e-05)]_\ 22 chr7:135594152-135594232 2.14e-05 34_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 26 chr11:61781521-61781601 1.64e-03 26_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 34 chr2:112192032-112192112 6.34e-02 80 chr7:149261857-149261937 4.75e-03 28_[+5(6.29e-05)]_4_[+2(3.29e-05)]_\ 32 chr18:3659802-3659882 2.39e-01 80 chr17:70758206-70758286 8.44e-05 14_[+5(7.62e-05)]_19_[+1(1.53e-05)]_\ 31 chr16:50491942-50492022 3.77e-05 48_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 12 chr10:99177779-99177859 2.89e-02 23_[+2(3.29e-05)]_49 chr20:5615704-5615784 2.16e-06 24_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_21 chr10:21552983-21553063 3.46e-01 80 chr20:49125564-49125644 5.41e-02 43_[+1(3.25e-05)]_29 chr20:36170910-36170990 3.50e-02 80 chr6:34688089-34688169 7.23e-03 43_[+2(3.29e-05)]_29 chr1:173391905-173391985 1.42e-02 72_[+1(1.53e-05)] chr3:195414162-195414242 1.56e-02 80 chr1:22231226-22231306 4.53e-01 80 chr16:17684940-17685020 2.66e-05 28_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 29 chr6:109745722-109745802 4.99e-04 19_[+3(9.65e-05)]_4_[+1(8.14e-05)]_\ 41 chr7:150052897-150052977 4.96e-01 80 chrX:154044940-154045020 8.94e-01 80 chr19:29019553-29019633 5.31e-05 4_[+5(1.49e-05)]_19_[+1(1.53e-05)]_\ 41 chrX:16604164-16604244 3.16e-05 45_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 15 chr12:116774589-11677466 4.43e-03 55_[+4(1.23e-05)]_17 chr9:33703601-33703681 2.19e-06 13_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_32 chr19:49385475-49385555 1.45e-03 32_[+1(1.53e-05)]_13_[+1(1.53e-05)]_\ 19 chr10:4909320-4909400 2.79e-02 57_[+2(1.51e-05)]_15 chr6:28325001-28325081 1.45e-01 80 chr7:130626382-130626462 2.06e-01 80 chr1:166662601-166662681 7.85e-04 21_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 27 chr1:173443568-173443648 5.21e-02 63_[+1(3.25e-05)]_9 chr6:107278996-107279076 4.19e-02 48_[+4(2.61e-05)]_24 chr11:63298712-63298792 2.23e-01 80 chr16:17176613-17176693 1.41e-02 33_[+3(6.40e-05)]_30_[+1(6.42e-05)]_\ 1 chr16:17176410-17176490 1.17e-04 44_[+2(1.51e-05)]_16_[+4(4.07e-05)]_\ 4 chr1:85745576-85745656 1.20e-01 80 chr11:96063820-96063900 1.10e-01 80 chr1:11748693-11748773 1.54e-04 47_[+5(9.30e-05)]_7_[+3(1.68e-05)]_\ 10 chr1:116820565-116820645 1.01e-01 20_[+1(3.25e-05)]_52 chr1:11748916-11748996 9.64e-02 80 chr1:39855965-39856045 2.93e-01 80 chr1:26451582-26451662 8.56e-01 80 chr16:26981063-26981143 5.87e-06 1_[+5(1.49e-05)]_7_[+3(1.68e-05)]_4_\ [+1(1.53e-05)]_44 chr6:24401168-24401248 6.57e-02 6_[+2(3.29e-05)]_66 chr1:225654674-225654754 1.42e-03 23_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 25 chr1:1545373-1545453 3.19e-02 80 chr2:86117838-86117918 1.24e-01 80 chr9:139684047-139684127 1.80e-01 80 chr3:72053971-72054051 2.89e-01 80 chr7:75473134-75473214 5.68e-04 45_[+2(1.51e-05)]_16_[+4(6.14e-05)]_\ 3 chr20:46768438-46768518 9.23e-04 44_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 4 chr8:29952229-29952309 1.06e-02 28_[+2(3.29e-05)]_44 chr7:75473334-75473414 4.18e-01 80 chr3:37866026-37866106 8.08e-04 44_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 4 chr8:29995092-29995172 3.64e-01 80 chr2:12223990-12224070 1.44e-05 4_[+5(1.49e-05)]_19_[+1(1.53e-05)]_\ 41 chr7:128429916-128429996 3.58e-02 4_[+1(1.53e-05)]_68 chr2:65028000-65028080 1.48e-04 56_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 1 chr12:9185011-9185091 9.80e-03 [+1(3.25e-05)]_72 chr14:31711904-31711984 4.00e-04 12_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 36 chr1:55417642-55417722 7.31e-06 45_[+5(6.29e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)] chr21:47939290-47939370 6.88e-05 9_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 39 chr15:45876405-45876485 6.13e-05 24_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 24 chr16:77773574-77773654 5.92e-04 9_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 39 chr2:231519557-231519637 9.75e-06 19_[+5(6.29e-05)]_7_[+3(9.65e-05)]_\ 4_[+1(1.53e-05)]_26 chr11:59383559-59383639 4.35e-01 80 chr15:75433013-75433093 6.21e-01 80 chr5:168007921-168008001 3.47e-06 13_[+5(1.49e-05)]_5_[+3(7.98e-05)]_\ 4_[+1(1.53e-05)]_34 chr7:16458934-16459014 1.05e-02 22_[+1(1.53e-05)]_50 chr19:21793729-21793809 7.49e-01 80 chr6:36852515-36852595 5.48e-02 44_[+2(3.29e-05)]_28 chr3:4780473-4780553 1.26e-02 7_[+2(1.51e-05)]_65 chr6:37396477-37396557 4.21e-02 56_[+5(1.49e-05)]_16 chr6:158176293-158176373 5.97e-04 16_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 32 chr6:30805749-30805829 4.23e-01 80 chr11:76764441-76764521 5.71e-05 50_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 7 chr6:134343865-134343945 9.56e-03 28_[+2(3.29e-05)]_23_[+2(3.29e-05)]_\ 13 chr1:155277137-155277217 7.47e-04 9_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 51 chr9:101836363-101836443 1.70e-02 61_[+1(4.79e-05)]_11 chr6:39967568-39967648 7.98e-01 80 chr5:39150241-39150321 5.06e-02 7_[+2(3.29e-05)]_65 chr6:10662540-10662620 8.72e-04 10_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 50 chr15:68212988-68213068 3.51e-06 13_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_32 chr22:19935199-19935279 4.90e-01 80 chr8:22808301-22808381 4.78e-01 80 chr5:90587921-90588001 2.25e-02 59_[+2(1.51e-05)]_13 chr5:68387005-68387085 5.53e-06 14_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 34 chr14:103017345-10301742 3.51e-06 29_[+5(1.49e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(3.25e-05)]_16 chr21:44391179-44391259 4.24e-05 29_[+5(2.75e-05)]_19_[+1(1.53e-05)]_\ 16 chr5:36442527-36442607 1.78e-03 23_[+1(9.97e-05)]_49 chrX:16949715-16949795 8.34e-03 51_[+5(1.49e-05)]_21 chr15:68316391-68316471 4.72e-02 80 chr6:134612492-134612572 4.48e-01 80 chr11:86648399-86648479 1.10e-06 7_[+5(1.49e-05)]_7_[+3(1.68e-05)]_4_\ [+1(1.53e-05)]_38 chrX:16949915-16949995 7.31e-02 18_[+2(7.40e-05)]_54 chr6:164758831-164758911 1.31e-05 29_[+3(1.68e-05)]_4_[+1(1.53e-05)]_\ 31 chr10:52085417-52085497 4.13e-02 30_[+3(1.68e-05)]_42 chr16:88366644-88366724 1.94e-01 80 chr16:4294281-4294361 5.18e-01 80 chr6:53223799-53223879 5.74e-01 80 chr15:90325489-90325569 6.06e-06 30_[+5(7.62e-05)]_7_[+3(1.68e-05)]_\ 4_[+1(1.53e-05)]_15 chr1:18770226-18770306 4.16e-03 45_[+2(5.90e-05)]_27 chr7:2996635-2996715 1.18e-01 80 chr2:20776439-20776519 5.00e-01 80 chr7:139615682-139615762 6.02e-02 21_[+1(8.14e-05)]_51 chr15:23161810-23161890 8.38e-01 80 chr10:29100740-29100820 7.75e-04 10_[+3(3.57e-05)]_4_[+1(1.53e-05)]_\ 50 chr19:35808692-35808772 1.16e-02 68_[+2(4.63e-05)]_4 chr8:135722449-135722529 2.17e-04 11_[+2(3.29e-05)]_27_[+3(6.40e-05)]_\ 26 chr4:110691308-110691388 3.06e-01 80 chr11:57679174-57679254 2.18e-02 15_[+4(1.23e-05)]_57 chr2:28887063-28887143 6.06e-01 80 chrX:13122327-13122407 2.62e-01 80 chr6:2980137-2980217 3.96e-05 15_[+5(1.49e-05)]_19_[+1(1.53e-05)]_\ 30 chr16:31033613-31033693 2.54e-02 1_[+4(1.23e-05)]_71 chrX:13122125-13122205 3.90e-02 62_[+2(1.51e-05)]_10 chr19:46081273-46081353 4.02e-02 43_[+1(1.53e-05)]_29 chr1:62432727-62432807 1.10e-03 46_[+2(1.51e-05)]_16_[+4(1.23e-05)]_\ 2 chr2:120096539-120096619 3.67e-02 11_[+2(1.51e-05)]_61 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n09.farnam.hpc.yale.internal ********************************************************************************