******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/CEBPG.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr5:142382377-142382457 1.0000 80 chr16:84027760-84027840 1.0000 80 chr19:33839321-33839401 1.0000 80 chr1:9350325-9350405 1.0000 80 chr17:7677540-7677620 1.0000 80 chr10:89856982-89857062 1.0000 80 chr5:142105729-142105809 1.0000 80 chr12:90163115-90163195 1.0000 80 chr3:12435612-12435692 1.0000 80 chr1:207581388-207581468 1.0000 80 chr1:7018646-7018726 1.0000 80 chr5:32531844-32531924 1.0000 80 chr7:139865360-139865440 1.0000 80 chr1:8278871-8278951 1.0000 80 chr12:27702816-27702896 1.0000 80 chr12:113652885-11365296 1.0000 80 chr17:6830741-6830821 1.0000 80 chr2:70154411-70154491 1.0000 80 chr12:89556739-89556819 1.0000 80 chrX:30645981-30646061 1.0000 80 chr8:17383201-17383281 1.0000 80 chr3:36721073-36721153 1.0000 80 chr16:81876995-81877075 1.0000 80 chr7:123635929-123636009 1.0000 80 chr10:21976753-21976833 1.0000 80 chr17:25572069-25572149 1.0000 80 chr11:57202305-57202385 1.0000 80 chr6:36617771-36617851 1.0000 80 chr8:124070590-124070670 1.0000 80 chr11:7621598-7621678 1.0000 80 chr15:51536958-51537038 1.0000 80 chr12:90485135-90485215 1.0000 80 chr1:116520413-116520493 1.0000 80 chr5:142431270-142431350 1.0000 80 chr1:61524332-61524412 1.0000 80 chr6:4382730-4382810 1.0000 80 chr22:17956022-17956102 1.0000 80 chr1:182429790-182429870 1.0000 80 chr12:50144312-50144392 1.0000 80 chr8:52875601-52875681 1.0000 80 chr16:57709748-57709828 1.0000 80 chr11:59634038-59634118 1.0000 80 chr13:52678934-52679014 1.0000 80 chr12:48275805-48275885 1.0000 80 chr3:15329201-15329281 1.0000 80 chr4:74974929-74975009 1.0000 80 chr14:24163893-24163973 1.0000 80 chr22:29195330-29195410 1.0000 80 chr15:55542779-55542859 1.0000 80 chr4:188538424-188538504 1.0000 80 chr2:123148154-123148234 1.0000 80 chr1:176210746-176210826 1.0000 80 chr15:68828836-68828916 1.0000 80 chr8:54758883-54758963 1.0000 80 chr5:118282036-118282116 1.0000 80 chr6:117719175-117719255 1.0000 80 chr21:40635513-40635593 1.0000 80 chr3:58321054-58321134 1.0000 80 chr11:93141128-93141208 1.0000 80 chr6:6556925-6557005 1.0000 80 chr6:53494893-53494973 1.0000 80 chrX:151065776-151065856 1.0000 80 chr15:80609943-80610023 1.0000 80 chr6:88441650-88441730 1.0000 80 chrX:133738254-133738334 1.0000 80 chr9:100639216-100639296 1.0000 80 chr20:48619826-48619906 1.0000 80 chr9:124860224-124860304 1.0000 80 chr6:41145606-41145686 1.0000 80 chr4:141172324-141172404 1.0000 80 chr5:79695664-79695744 1.0000 80 chr1:61586758-61586838 1.0000 80 chr7:35566407-35566487 1.0000 80 chr15:52089180-52089260 1.0000 80 chr10:15745581-15745661 1.0000 80 chr16:20922182-20922262 1.0000 80 chr2:85932848-85932928 1.0000 80 chr10:119522361-11952244 1.0000 80 chr4:96170349-96170429 1.0000 80 chr6:136547238-136547318 1.0000 80 chr21:40211652-40211732 1.0000 80 chr18:2627940-2628020 1.0000 80 chr6:36634972-36635052 1.0000 80 chr1:243376493-243376573 1.0000 80 chr3:36689182-36689262 1.0000 80 chr2:145463386-145463466 1.0000 80 chr6:110462155-110462235 1.0000 80 chr18:29291537-29291617 1.0000 80 chr6:20573307-20573387 1.0000 80 chr8:10862659-10862739 1.0000 80 chr16:25017134-25017214 1.0000 80 chr9:37290942-37291022 1.0000 80 chr21:43619707-43619787 1.0000 80 chr6:162520847-162520927 1.0000 80 chr11:102631282-10263136 1.0000 80 chr5:36373665-36373745 1.0000 80 chr19:18920347-18920427 1.0000 80 chr17:57773514-57773594 1.0000 80 chr15:66023332-66023412 1.0000 80 chr2:54760296-54760376 1.0000 80 chr1:180023256-180023336 1.0000 80 chr14:74252663-74252743 1.0000 80 chr10:22013698-22013778 1.0000 80 chr11:72673306-72673386 1.0000 80 chr13:23735382-23735462 1.0000 80 chr6:36258505-36258585 1.0000 80 chr15:58708015-58708095 1.0000 80 chr6:3339289-3339369 1.0000 80 chr12:48934023-48934103 1.0000 80 chr5:78614942-78615022 1.0000 80 chr10:115785240-11578532 1.0000 80 chr3:4548889-4548969 1.0000 80 chr8:20058443-20058523 1.0000 80 chr5:55750242-55750322 1.0000 80 chr2:69234976-69235056 1.0000 80 chr3:197036623-197036703 1.0000 80 chr19:45091780-45091860 1.0000 80 chr22:17291246-17291326 1.0000 80 chr14:103828308-10382838 1.0000 80 chr8:123701962-123702042 1.0000 80 chr3:4946661-4946741 1.0000 80 chr2:208176433-208176513 1.0000 80 chr2:62266650-62266730 1.0000 80 chr5:5598866-5598946 1.0000 80 chr21:36147205-36147285 1.0000 80 chr3:127729217-127729297 1.0000 80 chr6:149727241-149727321 1.0000 80 chr2:158333993-158334073 1.0000 80 chr10:93389592-93389672 1.0000 80 chr2:33090788-33090868 1.0000 80 chr6:16335052-16335132 1.0000 80 chr18:1438613-1438693 1.0000 80 chr12:50226748-50226828 1.0000 80 chr5:53290100-53290180 1.0000 80 chr8:10556197-10556277 1.0000 80 chr2:72161858-72161938 1.0000 80 chr15:75009120-75009200 1.0000 80 chr10:90846674-90846754 1.0000 80 chr13:48519992-48520072 1.0000 80 chr15:58525742-58525822 1.0000 80 chr6:157890454-157890534 1.0000 80 chr10:11581484-11581564 1.0000 80 chr15:66662618-66662698 1.0000 80 chr3:185821900-185821980 1.0000 80 chr4:141349351-141349431 1.0000 80 chr6:159505696-159505776 1.0000 80 chr6:144629167-144629247 1.0000 80 chr3:146224527-146224607 1.0000 80 chr19:47397357-47397437 1.0000 80 chr1:84305442-84305522 1.0000 80 chr19:15411635-15411715 1.0000 80 chr2:178052491-178052571 1.0000 80 chr1:37906403-37906483 1.0000 80 chr4:153400775-153400855 1.0000 80 chr1:205876598-205876678 1.0000 80 chr7:129338947-129339027 1.0000 80 chr12:90127602-90127682 1.0000 80 chr8:16423327-16423407 1.0000 80 chr10:71029672-71029752 1.0000 80 chr16:24269500-24269580 1.0000 80 chr10:71029888-71029968 1.0000 80 chr9:117080253-117080333 1.0000 80 chr2:223846893-223846973 1.0000 80 chr11:34676564-34676644 1.0000 80 chr6:125335648-125335728 1.0000 80 chr5:78531249-78531329 1.0000 80 chr20:49838655-49838735 1.0000 80 chr11:88111761-88111841 1.0000 80 chr4:73555799-73555879 1.0000 80 chr2:135814523-135814603 1.0000 80 chr12:93638073-93638153 1.0000 80 chr11:67297063-67297143 1.0000 80 chr2:32398108-32398188 1.0000 80 chr7:140541309-140541389 1.0000 80 chr3:37177792-37177872 1.0000 80 chr22:21428753-21428833 1.0000 80 chr14:57075544-57075624 1.0000 80 chr16:126343-126423 1.0000 80 chr4:123795538-123795618 1.0000 80 chrX:119490086-119490166 1.0000 80 chr5:95197218-95197298 1.0000 80 chr5:142541577-142541657 1.0000 80 chr17:2185870-2185950 1.0000 80 chr4:83047089-83047169 1.0000 80 chr3:24720157-24720237 1.0000 80 chr21:30590238-30590318 1.0000 80 chr1:209847377-209847457 1.0000 80 chr1:25417615-25417695 1.0000 80 chr15:43834124-43834204 1.0000 80 chr17:32674262-32674342 1.0000 80 chr14:95990186-95990266 1.0000 80 chr21:15734459-15734539 1.0000 80 chr1:38328194-38328274 1.0000 80 chr3:46649206-46649286 1.0000 80 chr1:109705073-109705153 1.0000 80 chr5:138038313-138038393 1.0000 80 chr3:136676701-136676781 1.0000 80 chr12:57623918-57623998 1.0000 80 chr19:11435087-11435167 1.0000 80 chr20:18565909-18565989 1.0000 80 chr3:195782790-195782870 1.0000 80 chr1:92981629-92981709 1.0000 80 chr20:30624727-30624807 1.0000 80 chr1:26021678-26021758 1.0000 80 chr7:75575171-75575251 1.0000 80 chr15:45643573-45643653 1.0000 80 chr17:53750214-53750294 1.0000 80 chr5:32391195-32391275 1.0000 80 chr11:12972363-12972443 1.0000 80 chr10:62186302-62186382 1.0000 80 chr17:14112715-14112795 1.0000 80 chr2:183897073-183897153 1.0000 80 chr7:134047796-134047876 1.0000 80 chr10:64873933-64874013 1.0000 80 chr15:67973045-67973125 1.0000 80 chr2:47747433-47747513 1.0000 80 chr2:55327166-55327246 1.0000 80 chr14:71315758-71315838 1.0000 80 chr1:26813998-26814078 1.0000 80 chr5:118658879-118658959 1.0000 80 chr1:222628916-222628996 1.0000 80 chr8:124629045-124629125 1.0000 80 chr7:144559790-144559870 1.0000 80 chr13:52098654-52098734 1.0000 80 chr9:94181683-94181763 1.0000 80 chr1:153763674-153763754 1.0000 80 chr5:145061367-145061447 1.0000 80 chr4:89724868-89724948 1.0000 80 chr18:54801927-54802007 1.0000 80 chr1:8272192-8272272 1.0000 80 chr4:14969749-14969829 1.0000 80 chr6:43677176-43677256 1.0000 80 chr20:33268529-33268609 1.0000 80 chr10:23801466-23801546 1.0000 80 chr6:7698528-7698608 1.0000 80 chr1:32961816-32961896 1.0000 80 chr6:24223468-24223548 1.0000 80 chr10:80201620-80201700 1.0000 80 chr18:20065874-20065954 1.0000 80 chr3:5168470-5168550 1.0000 80 chr1:33515917-33515997 1.0000 80 chr6:45413435-45413515 1.0000 80 chr1:52521394-52521474 1.0000 80 chr2:106072261-106072341 1.0000 80 chr1:193080879-193080959 1.0000 80 chr6:35674382-35674462 1.0000 80 chr2:88399826-88399906 1.0000 80 chr2:217126008-217126088 1.0000 80 chr1:54247525-54247605 1.0000 80 chr3:177989614-177989694 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_CEBPG/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/CEBPG.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.293 C 0.208 G 0.208 T 0.29 Background letter frequencies (from file dataset with add-one prior applied): A 0.293 C 0.208 G 0.208 T 0.29 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGATGCAA MEME-1 width = 8 sites = 185 llr = 1446 E-value = 2.3e-197 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::7::2a9 pos.-specific C :::1:8:: probability G :82:a::: matrix T a218:1:1 bits 2.3 * 2.0 * 1.8 * * * 1.6 * * * Relative 1.4 ** * ** Entropy 1.1 ** **** (11.3 bits) 0.9 ** ***** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TGATGCAA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:54247525-54247605 54 1.90e-05 GAACCAGCAA TGATGCAA TCCAGCAGCc chr1:193080879-193080959 27 1.90e-05 tggaatgcga tgatgcaa tcacagctca chr1:52521394-52521474 50 1.90e-05 TGCAACCAAC TGATGCAA GCTCCAAGAA chr18:20065874-20065954 23 1.90e-05 gaagagGAGA TGATGCAA CATGAGCAAG chr10:80201620-80201700 43 1.90e-05 taagagactg tgatgcaa ttccggctga chr1:32961816-32961896 40 1.90e-05 GGGTAATTGA TGATGCAA TGTATGAAAA chr1:222628916-222628996 21 1.90e-05 GTGAGGAGGC TGATGCAA CCCCCAGGGG chr14:71315758-71315838 20 1.90e-05 acagaccaga tgatgcaa tgcttagtaa chr2:55327166-55327246 41 1.90e-05 CTACTTTAAA TGATGCAA TACTTGCACA chr20:30624727-30624807 28 1.90e-05 GTGCAGAAAA TGATGCAA TCTGCAGAAA chr1:92981629-92981709 28 1.90e-05 TGCCACGTTC TGATGCAA CATCCTATCG chr3:195782790-195782870 41 1.90e-05 tagagtgcag tgatgcaa tcacagctcc chr12:57623918-57623998 35 1.90e-05 GCCCTGCAGA TGATGCAA CCGAGCTTCA chr3:136676701-136676781 48 1.90e-05 CACTCCCTGC TGATGCAA CATCTGGGTT chr5:138038313-138038393 28 1.90e-05 tccataaaaa tgatgcaa taacgtttgt chr17:32674262-32674342 29 1.90e-05 ACTAAAATGA TGATGCAA CAACTGGTAA chr4:83047089-83047169 31 1.90e-05 CCTGAAATAG TGATGCAA TCAGCAGAAA chr4:123795538-123795618 35 1.90e-05 TAGGCTTAAA TGATGCAA TGCTTTCTGG chr14:57075544-57075624 7 1.90e-05 TGTAAG TGATGCAA TAAACATGAT chr22:21428753-21428833 49 1.90e-05 tggagtgcag tgatgcaa tcacagctca chr11:88111761-88111841 52 1.90e-05 AGGTTTCTGA TGATGCAA TGGGATGAAA chr2:223846893-223846973 57 1.90e-05 CTGGCAGAGC TGATGCAA CTCTAGTGCC chr9:117080253-117080333 22 1.90e-05 ggagtaataa tgatgcaa tattgccaaa chr8:16423327-16423407 30 1.90e-05 atttgaaaga tgatgcaa cactgtgaaa chr7:129338947-129339027 25 1.90e-05 CGTGGCATGA TGATGCAA CAGGATAGTA chr1:37906403-37906483 52 1.90e-05 gtcttcccaa tgatgcaa ctctgaccca chr19:15411635-15411715 20 1.90e-05 gggcgaaaaa tgatgcaa ccctccagaa chr19:47397357-47397437 39 1.90e-05 AAAGAGCAAA TGATGCAA TTAGGATGCA chr3:185821900-185821980 9 1.90e-05 TTTCTCTA TGATGCAA CTCTCAAGAG chr15:58525742-58525822 17 1.90e-05 ATAGAAAGGG TGATGCAA TAGGTGATAT chr10:90846674-90846754 25 1.90e-05 GCTAATGACA TGATGCAA TCAAAAGGAA chr15:75009120-75009200 54 1.90e-05 ggtcagcctc tgatgcaa tccctttgac chr2:72161858-72161938 49 1.90e-05 CTGTCTTTGA TGATGCAA CAACTGCCTT chr5:53290100-53290180 23 1.90e-05 ACTAATGCAA TGATGCAA TGTAATACTA chr5:5598866-5598946 46 1.90e-05 cacttcctga tgatgcaa tttctatcaa chr19:45091780-45091860 51 1.90e-05 AATGTGTGTA TGATGCAA GTCTACTGCA chr3:197036623-197036703 25 1.90e-05 CCCAAGGAAA TGATGCAA TACTGTACAA chr10:115785240-11578532 23 1.90e-05 CACAAGGAAA TGATGCAA TAATTTCTTT chr12:48934023-48934103 6 1.90e-05 tatga tgatgcaa cttgtcctag chr6:3339289-3339369 47 1.90e-05 ATTTCTTAAG TGATGCAA TAGCTCTGTG chr15:58708015-58708095 48 1.90e-05 cacttgtgga tgatgcaa tgtctactgc chr6:36258505-36258585 33 1.90e-05 AAAGGAAAGA TGATGCAA TGGTTTCAAG chr11:72673306-72673386 24 1.90e-05 aataacgtga tgatgcaa tcgctctgac chr1:180023256-180023336 50 1.90e-05 TGTTGTCATA TGATGCAA TATTGTAAAC chr2:145463386-145463466 27 1.90e-05 AAGTAGGGGA TGATGCAA CCACTGTCCT chr1:243376493-243376573 38 1.90e-05 cctacgagca tgatgcaa tagtgaaata chr6:36634972-36635052 43 1.90e-05 GGCCGCATGA TGATGCAA CAATGCAACA chr21:40211652-40211732 23 1.90e-05 AAAGTTTGTA TGATGCAA CGTTCTTGTG chr4:96170349-96170429 35 1.90e-05 aatcacctaa tgatgcaa ttctcagaat chr2:85932848-85932928 48 1.90e-05 gtctgaggag tgatgcaa tagagagtgg chr10:15745581-15745661 25 1.90e-05 CCCCCAAGTA TGATGCAA CAGTGTGACA chr1:61586758-61586838 54 1.90e-05 GTACTGCAAA TGATGCAA TAGCTAAATA chrX:133738254-133738334 24 1.90e-05 TAAGCATGTA TGATGCAA TACCATAGGC chr15:80609943-80610023 50 1.90e-05 AGAACAAGGG TGATGCAA TAAGCCAAGG chr6:53494893-53494973 37 1.90e-05 TCCTAGAAGA TGATGCAA TAGATGACAA chr11:93141128-93141208 36 1.90e-05 ACAGTGGGGA TGATGCAA TACATACATC chr21:40635513-40635593 48 1.90e-05 atgatacata tgatgcaa tgacagaaca chr6:117719175-117719255 7 1.90e-05 TTTCTC TGATGCAA TTCATCTCTA chr15:68828836-68828916 23 1.90e-05 TGTAAGAATA TGATGCAA CTCTGTAACA chr2:123148154-123148234 45 1.90e-05 TTGACTGGGG TGATGCAA TCAGCTGGAA chr4:188538424-188538504 25 1.90e-05 GAGAGAACCA TGATGCAA TAGAGTGCAA chr14:24163893-24163973 27 1.90e-05 cttacagatc tgatgcaa tccatctttc chr3:15329201-15329281 31 1.90e-05 GATTACGCAA TGATGCAA AACATTCCCT chr12:48275805-48275885 56 1.90e-05 GGAGATGCTA TGATGCAA GCGAGTGGAA chr6:4382730-4382810 28 1.90e-05 CAGGTTCGAA TGATGCAA TGGGAGTGAC chr15:51536958-51537038 62 1.90e-05 tgttgcaagc tgatgcaa atttataaag chr11:7621598-7621678 31 1.90e-05 ACCACAGTGC TGATGCAA TATCTCTGGC chr6:36617771-36617851 21 1.90e-05 GTGACAATGA TGATGCAA CATTTTTATG chr3:12435612-12435692 19 1.90e-05 GTATTTTAGG TGATGCAA TCAAGTTGCA chr16:84027760-84027840 21 1.90e-05 acaaaggcca tgatgcAA GTTCTGTGCA chr13:52098654-52098734 45 3.26e-05 cggagaagga tggtgcaa gatttcatca chr15:45643573-45643653 15 3.26e-05 GAGAAAGTTA TGGTGCAA TATTTTCAGG chr1:205876598-205876678 25 3.26e-05 tacaccagga tggtgcaa gatttcatca chr7:35566407-35566487 16 3.26e-05 caatgctttc tggtgcaa cctgttgcca chr9:124860224-124860304 53 3.26e-05 TTAAGGGAAC TGGTGCAA GCATTGCAAT chr1:176210746-176210826 26 3.26e-05 agcagcaggg tggtgcaa gatttcatca chr5:142105729-142105809 14 3.26e-05 acaggatgga tggtgcaa caatcaccac chr4:14969749-14969829 51 7.27e-05 gaacccctcc tgacgcAA TCGTTGCATC chr4:89724868-89724948 39 7.27e-05 CATAAAGTGA TTATGCAA TATGCTGCAA chr7:134047796-134047876 63 7.27e-05 AGCCCCTGGC TGACGCAA TACTGTTTGC chr3:46649206-46649286 16 7.27e-05 AGTCCCAGGC TTATGCAA TCTTCCAGCA chr3:37177792-37177872 43 7.27e-05 tgatgaaatg ttatgcaa ttaggtaggt chr8:20058443-20058523 2 7.27e-05 A TTATGCAA TGGCTGTCAA chr8:10862659-10862739 53 7.27e-05 ccaagcagaa tgacgcaa gatttcatca chr4:141172324-141172404 23 7.27e-05 ccagaatgaa tgacgcaa gagacagcaa chr1:7018646-7018726 39 7.27e-05 AATTTGAATG TGACGCAA TAAGCCTGCA chr7:75575171-75575251 65 9.16e-05 CCTGTTCCAG TGTTGCAA ATGGTTGG chr1:26021678-26021758 50 9.16e-05 TAAGTGGTGA TGTTGCAA TTCCTTGGAT chr1:209847377-209847457 32 9.16e-05 CTGCAAAGGC TGTTGCAA GATTGCATCA chr3:24720157-24720237 58 9.16e-05 TTCATCCTGA TGTTGCAA TAGGAATATG chr11:34676564-34676644 45 9.16e-05 CCTGATGGGA TGTTGCAA CCTCACCCTG chr6:24223468-24223548 47 1.18e-04 TAGAACTAGA TGATGAAA CCACGTGCAA chr10:23801466-23801546 22 1.18e-04 ctgagtaaca tgatgaaa tcttgcgtca chr1:153763674-153763754 11 1.18e-04 cttttcgggg tgatgaaa tgttttaaaa chr1:26813998-26814078 46 1.18e-04 ctgagtagca tgatgaaa tcttgcacca chr10:64873933-64874013 72 1.18e-04 CAACAGCGTA TGATGAAA A chr10:62186302-62186382 32 1.18e-04 ATCATCCAGA TGATGAAA TCTGTTGCTT chr5:32391195-32391275 46 1.18e-04 ttgagcagtg tgatgaaa tcttgcgctg chr14:95990186-95990266 53 1.18e-04 cacataaaga tgatgaaa cgcactgcaa chr7:140541309-140541389 29 1.18e-04 tatatgtgta tgatgaaa tattcagcca chr5:78531249-78531329 33 1.18e-04 CAGTACATAA TGATGAAA CCTGAAGCAA chr4:141349351-141349431 23 1.18e-04 GCAACCcagg tgatgaaa ctgatggcaa chr15:66023332-66023412 34 1.18e-04 TGAGAGCTAG TGATGAAA TAATCTGCAA chr18:2627940-2628020 37 1.18e-04 attcacacta tgatgaaa tcacctaatg chr5:118282036-118282116 31 1.18e-04 AGACACCAAC TGATGAAA CAGGGTGCAA chr13:52678934-52679014 40 1.18e-04 AATGTATGTA TGATGAAA TGTTGAGCAA chr16:57709748-57709828 18 1.18e-04 tcctttgggg tgatgaaa tattctggaa chr1:182429790-182429870 30 1.18e-04 cccaggaaga tgatgaaa taggaagcac chr8:124070590-124070670 38 1.18e-04 TCTGTTTTAC TGATGAAA CAGAACTATT chr10:21976753-21976833 26 1.18e-04 ACAGAACACA TGATGAAA TAGTATGAAA chr7:123635929-123636009 15 1.18e-04 TAGCATTAGA TGATGAAA TTGTGAGATG chr8:17383201-17383281 42 1.18e-04 GAGAGGTAGA TGATGAAA TACTGTTCTG chr17:6830741-6830821 29 1.18e-04 CCAAAAAAGA TGATGAAA TGGGAGAGTA chr12:113652885-11365296 31 1.18e-04 TTGCTGGTTA TGATGAAA TACTTTccac chr7:139865360-139865440 28 1.18e-04 ctgagcatca tgatgaaa tcttgcacca chr12:90163115-90163195 52 1.18e-04 tgacatttga tgatgaaa tcctgctgtg chr12:90485135-90485215 50 1.37e-04 CCACACCCAG TGATGCAT CGGTGATTGC chr6:43677176-43677256 13 1.66e-04 tttctggaca ttgtgcaa tatgtttccc chr1:109705073-109705153 54 1.66e-04 GTGGGTCTGA TTGTGCAA TAGGAAAGGC chr1:38328194-38328274 22 1.66e-04 gatttcatca ttgtgcaa acatcatagc chr12:93638073-93638153 40 1.66e-04 ggttcagata ttgtgcaa tgcaaaacat chr2:54760296-54760376 39 1.66e-04 tggagcgaga tggcgcaa gatttcatca chr19:18920347-18920427 11 1.66e-04 acacaccatg ttgtgcaa tcactacctc chr6:162520847-162520927 28 1.66e-04 agtcaccata ttgtgcaa tactgtgcaa chr20:48619826-48619906 16 1.66e-04 cttcacgagg ttgtgcaa ccatcatccc chr4:74974929-74975009 65 1.66e-04 TGAAATATTG TTGTGCAA TTCAGGGT chr20:49838655-49838735 19 1.99e-04 AAACAATAGC TGAGGCAA TCCCGGCAAT chr2:69234976-69235056 57 1.99e-04 GAAGAGGGTC TGAAGCAA GAAGGAAACA chr16:20922182-20922262 31 1.99e-04 GACAGGGAAG TGAAGCAA TCATTAAGAG chr10:11581484-11581564 15 2.25e-04 GGATATGAAG TGATGTAA CAATATTTAA chr8:123701962-123702042 38 2.25e-04 TCCACTGAGA TGATGTAA TACTTGTATC chr6:41145606-41145686 61 2.25e-04 CATCAACCAC TGATGTAA TAGAAACCTG chr11:59634038-59634118 66 2.25e-04 TTTGTCCATG TGATGTAA TAAATAA chr22:17956022-17956102 24 2.25e-04 TCTGTTTAGA TGATGTAA GATTAGCCTT chr1:61524332-61524412 54 2.25e-04 TTGTTTACAG TGATGTAA CTTTCCCAAA chr10:89856982-89857062 47 2.25e-04 gtggatgatg tgatgtaa tgtaatgtaa chr16:25017134-25017214 11 2.44e-04 actaaggtga tggtgaaa tgtgatattc chr6:7698528-7698608 12 2.63e-04 TATGGTGTCA TTACGCAA CATTTCTTGT chr6:157890454-157890534 24 2.63e-04 TAGGGGAATC TTACGCAA TAATCATTTT chr21:36147205-36147285 22 2.63e-04 TGTTAACCTG TTACGCAA TATGACCTGG chr10:22013698-22013778 25 2.63e-04 TTACAGTGGA TTACGCAA TACTTTGGCC chr5:142431270-142431350 32 2.63e-04 CTCTCTAATG TTACGCAA TATTCCTATG chr17:7677540-7677620 6 3.16e-04 tgtga tgtcgcaa cagtcgatct chr15:67973045-67973125 24 4.36e-04 gggctgtcac tgctgcaa ctcaaagaTT chr6:149727241-149727321 57 4.36e-04 CTCACTAGTA TGCTGCAA TAAATACTCC chr14:103828308-10382838 29 4.36e-04 ctaagcagga tggagcaa gctagcaaga chr6:136547238-136547318 21 4.36e-04 CCCACTGCAG TGTTGAAA TTTAACAATT chr6:125335648-125335728 11 4.69e-04 tatgcctttc tgatgcag gaaatgagct chr20:33268529-33268609 19 5.27e-04 gagaTATATG TGTTGCAT CATCTTACAG chr1:8272192-8272272 45 5.27e-04 TTTCGAGTCA TGTTGCAT CATCTTTCAG chr9:94181683-94181763 58 5.27e-04 ATTTTCAGGC TGTTGCAT CACAGTGATG chr11:12972363-12972443 50 5.27e-04 atttcatctg tgttgcat catgccgact chr1:25417615-25417695 35 5.27e-04 GTTGCTGTCG TGTTGCAT CAGTGTTGTA chr4:73555799-73555879 47 5.27e-04 GATTGCCTGT TGTTGCAT CACCAAACTT chr6:159505696-159505776 13 5.27e-04 AAAGTACTGA TGTTGCAT CATCTACTTA chr8:10556197-10556277 25 5.27e-04 AAGTCATCAT TGTTGCAT CATCTCTGAA chr18:1438613-1438693 38 5.27e-04 AAAATGACAT TGTTGCAT CATACAGAAA chr17:57773514-57773594 22 5.27e-04 CGTTGCATTT TGTTGCAT CACTTTTGCA chr3:58321054-58321134 51 5.27e-04 GACTGAGAAA TGTTGCAT CAGCCCTGAA chr15:55542779-55542859 50 5.27e-04 GAACACAACA TGTTGCAT CACAACATTT chr5:142541577-142541657 45 5.41e-04 GCACTTTGAC TTGCGCAA TGCTGCTGGA chr16:126343-126423 51 5.41e-04 TGCCCAGAGA TTGCGCAA CCCCCAGCAC chr11:67297063-67297143 27 5.41e-04 agggtaatga ttgcgcaa caccgaatat chr6:16335052-16335132 33 5.41e-04 gagtgatcag ttgcgcaa gaggtctgga chr3:4946661-4946741 29 5.41e-04 TTCCTGAAGA TTGCGCAA GAGTCAACAG chr5:55750242-55750322 31 5.41e-04 GCTTGTTTTG TTGCGCAA TAGTGCCCCA chr5:36373665-36373745 34 5.41e-04 TGTTCTCTGG TTGCGCAA CATGGTGAGT chr6:20573307-20573387 44 5.41e-04 AAGGACCATG TTGCGCAA CTCATTGTTA chr4:153400775-153400855 40 6.13e-04 tagataaaca ttaggcaa gaatacaccc chr21:43619707-43619787 22 6.13e-04 AACAATTACA TTAGGCAA TATTATTACA chr11:57202305-57202385 51 6.13e-04 taggaggtag ttaagcaa tcttgtaagg chrX:30645981-30646061 34 7.02e-04 CACAACCAGA TTATGTAA CTTTTTCACG chr2:70154411-70154491 61 7.68e-04 CACTCTGGGA TGTTGTAA CAAGTCCATG chr1:8278871-8278951 6 8.15e-04 ACTTT TGAGGAAA ATGATGACTT chr5:79695664-79695744 26 8.34e-04 TGATGCACAG TCATGCAA TATACTGTAT chr21:15734459-15734539 1 8.43e-04 . TGGTGCAG ACCACAATCA chr15:66662618-66662698 65 9.23e-04 TTCACCTTGT TGAGGCAT CTTTTCCT chr2:88399826-88399906 47 1.11e-03 CATCATCAAA TTGAGCAA GACTTTGATG chr19:11435087-11435167 56 1.11e-03 GGATGCATGA TTGGGCAA GAACTTGCTT chr10:93389592-93389672 22 1.11e-03 CTTCCTAAAA TTGAGCAA TACAGACCTA chr17:25572069-25572149 51 1.11e-03 GGAAGAGAAA TTGAGCAA TGAAGAGAAA chr12:89556739-89556819 9 1.11e-03 TATTGCTG TTGAGCAA CACTAGGGAG chr1:207581388-207581468 41 1.11e-03 ATCAATTCTA TTGAGCAA TCATTGCAGA chr6:35674382-35674462 24 1.15e-03 ggagtgaaga ttgtgtaa cctctttgtc chr12:90127602-90127682 19 1.15e-03 cactcactga ttgtgtaa tcttgaacat -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:54247525-54247605 1.9e-05 53_[+1]_19 chr1:193080879-193080959 1.9e-05 26_[+1]_46 chr1:52521394-52521474 1.9e-05 49_[+1]_23 chr18:20065874-20065954 1.9e-05 22_[+1]_50 chr10:80201620-80201700 1.9e-05 42_[+1]_30 chr1:32961816-32961896 1.9e-05 39_[+1]_33 chr1:222628916-222628996 1.9e-05 20_[+1]_52 chr14:71315758-71315838 1.9e-05 19_[+1]_53 chr2:55327166-55327246 1.9e-05 40_[+1]_32 chr20:30624727-30624807 1.9e-05 27_[+1]_45 chr1:92981629-92981709 1.9e-05 27_[+1]_45 chr3:195782790-195782870 1.9e-05 40_[+1]_32 chr12:57623918-57623998 1.9e-05 34_[+1]_38 chr3:136676701-136676781 1.9e-05 47_[+1]_25 chr5:138038313-138038393 1.9e-05 27_[+1]_45 chr17:32674262-32674342 1.9e-05 28_[+1]_44 chr4:83047089-83047169 1.9e-05 30_[+1]_42 chr4:123795538-123795618 1.9e-05 34_[+1]_38 chr14:57075544-57075624 1.9e-05 6_[+1]_66 chr22:21428753-21428833 1.9e-05 48_[+1]_24 chr11:88111761-88111841 1.9e-05 51_[+1]_21 chr2:223846893-223846973 1.9e-05 56_[+1]_16 chr9:117080253-117080333 1.9e-05 21_[+1]_51 chr8:16423327-16423407 1.9e-05 29_[+1]_43 chr7:129338947-129339027 1.9e-05 24_[+1]_48 chr1:37906403-37906483 1.9e-05 51_[+1]_21 chr19:15411635-15411715 1.9e-05 19_[+1]_53 chr19:47397357-47397437 1.9e-05 38_[+1]_34 chr3:185821900-185821980 1.9e-05 8_[+1]_64 chr15:58525742-58525822 1.9e-05 16_[+1]_56 chr10:90846674-90846754 1.9e-05 24_[+1]_48 chr15:75009120-75009200 1.9e-05 53_[+1]_19 chr2:72161858-72161938 1.9e-05 48_[+1]_24 chr5:53290100-53290180 1.9e-05 22_[+1]_50 chr5:5598866-5598946 1.9e-05 45_[+1]_27 chr19:45091780-45091860 1.9e-05 50_[+1]_22 chr3:197036623-197036703 1.9e-05 24_[+1]_48 chr10:115785240-11578532 1.9e-05 22_[+1]_50 chr12:48934023-48934103 1.9e-05 5_[+1]_67 chr6:3339289-3339369 1.9e-05 46_[+1]_26 chr15:58708015-58708095 1.9e-05 47_[+1]_25 chr6:36258505-36258585 1.9e-05 32_[+1]_40 chr11:72673306-72673386 1.9e-05 23_[+1]_49 chr1:180023256-180023336 1.9e-05 49_[+1]_23 chr2:145463386-145463466 1.9e-05 26_[+1]_46 chr1:243376493-243376573 1.9e-05 37_[+1]_35 chr6:36634972-36635052 1.9e-05 42_[+1]_30 chr21:40211652-40211732 1.9e-05 22_[+1]_50 chr4:96170349-96170429 1.9e-05 34_[+1]_38 chr2:85932848-85932928 1.9e-05 47_[+1]_25 chr10:15745581-15745661 1.9e-05 24_[+1]_48 chr1:61586758-61586838 1.9e-05 53_[+1]_19 chrX:133738254-133738334 1.9e-05 23_[+1]_49 chr15:80609943-80610023 1.9e-05 49_[+1]_23 chr6:53494893-53494973 1.9e-05 36_[+1]_36 chr11:93141128-93141208 1.9e-05 35_[+1]_37 chr21:40635513-40635593 1.9e-05 47_[+1]_25 chr6:117719175-117719255 1.9e-05 6_[+1]_66 chr15:68828836-68828916 1.9e-05 22_[+1]_50 chr2:123148154-123148234 1.9e-05 44_[+1]_28 chr4:188538424-188538504 1.9e-05 24_[+1]_48 chr14:24163893-24163973 1.9e-05 26_[+1]_46 chr3:15329201-15329281 1.9e-05 30_[+1]_42 chr12:48275805-48275885 1.9e-05 55_[+1]_17 chr6:4382730-4382810 1.9e-05 27_[+1]_45 chr15:51536958-51537038 1.9e-05 61_[+1]_11 chr11:7621598-7621678 1.9e-05 30_[+1]_42 chr6:36617771-36617851 1.9e-05 20_[+1]_52 chr3:12435612-12435692 1.9e-05 18_[+1]_54 chr16:84027760-84027840 1.9e-05 20_[+1]_52 chr13:52098654-52098734 3.3e-05 44_[+1]_28 chr15:45643573-45643653 3.3e-05 14_[+1]_58 chr1:205876598-205876678 3.3e-05 24_[+1]_48 chr7:35566407-35566487 3.3e-05 15_[+1]_57 chr9:124860224-124860304 3.3e-05 52_[+1]_20 chr1:176210746-176210826 3.3e-05 25_[+1]_47 chr5:142105729-142105809 3.3e-05 13_[+1]_59 chr4:14969749-14969829 7.3e-05 50_[+1]_22 chr4:89724868-89724948 7.3e-05 38_[+1]_34 chr7:134047796-134047876 7.3e-05 62_[+1]_10 chr3:46649206-46649286 7.3e-05 15_[+1]_57 chr3:37177792-37177872 7.3e-05 42_[+1]_30 chr8:20058443-20058523 7.3e-05 1_[+1]_71 chr8:10862659-10862739 7.3e-05 52_[+1]_20 chr4:141172324-141172404 7.3e-05 22_[+1]_50 chr1:7018646-7018726 7.3e-05 38_[+1]_34 chr7:75575171-75575251 9.2e-05 64_[+1]_8 chr1:26021678-26021758 9.2e-05 49_[+1]_23 chr1:209847377-209847457 9.2e-05 31_[+1]_41 chr3:24720157-24720237 9.2e-05 57_[+1]_15 chr11:34676564-34676644 9.2e-05 44_[+1]_28 chr6:24223468-24223548 0.00012 46_[+1]_26 chr10:23801466-23801546 0.00012 21_[+1]_51 chr1:153763674-153763754 0.00012 10_[+1]_62 chr1:26813998-26814078 0.00012 45_[+1]_27 chr10:64873933-64874013 0.00012 71_[+1]_1 chr10:62186302-62186382 0.00012 31_[+1]_41 chr5:32391195-32391275 0.00012 45_[+1]_27 chr14:95990186-95990266 0.00012 52_[+1]_20 chr7:140541309-140541389 0.00012 28_[+1]_44 chr5:78531249-78531329 0.00012 32_[+1]_40 chr4:141349351-141349431 0.00012 22_[+1]_50 chr15:66023332-66023412 0.00012 33_[+1]_39 chr18:2627940-2628020 0.00012 36_[+1]_36 chr5:118282036-118282116 0.00012 30_[+1]_42 chr13:52678934-52679014 0.00012 39_[+1]_33 chr16:57709748-57709828 0.00012 17_[+1]_55 chr1:182429790-182429870 0.00012 29_[+1]_43 chr8:124070590-124070670 0.00012 37_[+1]_35 chr10:21976753-21976833 0.00012 25_[+1]_47 chr7:123635929-123636009 0.00012 14_[+1]_58 chr8:17383201-17383281 0.00012 41_[+1]_31 chr17:6830741-6830821 0.00012 28_[+1]_44 chr12:113652885-11365296 0.00012 30_[+1]_42 chr7:139865360-139865440 0.00012 27_[+1]_45 chr12:90163115-90163195 0.00012 51_[+1]_21 chr12:90485135-90485215 0.00014 49_[+1]_23 chr6:43677176-43677256 0.00017 12_[+1]_60 chr1:109705073-109705153 0.00017 53_[+1]_19 chr1:38328194-38328274 0.00017 21_[+1]_51 chr12:93638073-93638153 0.00017 39_[+1]_33 chr2:54760296-54760376 0.00017 38_[+1]_34 chr19:18920347-18920427 0.00017 10_[+1]_62 chr6:162520847-162520927 0.00017 27_[+1]_45 chr20:48619826-48619906 0.00017 15_[+1]_57 chr4:74974929-74975009 0.00017 64_[+1]_8 chr20:49838655-49838735 0.0002 18_[+1]_54 chr2:69234976-69235056 0.0002 56_[+1]_16 chr16:20922182-20922262 0.0002 30_[+1]_42 chr10:11581484-11581564 0.00023 14_[+1]_58 chr8:123701962-123702042 0.00023 37_[+1]_35 chr6:41145606-41145686 0.00023 60_[+1]_12 chr11:59634038-59634118 0.00023 65_[+1]_7 chr22:17956022-17956102 0.00023 23_[+1]_49 chr1:61524332-61524412 0.00023 53_[+1]_19 chr10:89856982-89857062 0.00023 46_[+1]_26 chr16:25017134-25017214 0.00024 10_[+1]_62 chr6:7698528-7698608 0.00026 11_[+1]_61 chr6:157890454-157890534 0.00026 23_[+1]_49 chr21:36147205-36147285 0.00026 21_[+1]_51 chr10:22013698-22013778 0.00026 24_[+1]_48 chr5:142431270-142431350 0.00026 31_[+1]_41 chr17:7677540-7677620 0.00032 5_[+1]_67 chr15:67973045-67973125 0.00044 23_[+1]_49 chr6:149727241-149727321 0.00044 56_[+1]_16 chr14:103828308-10382838 0.00044 28_[+1]_44 chr6:136547238-136547318 0.00044 20_[+1]_52 chr6:125335648-125335728 0.00047 10_[+1]_62 chr20:33268529-33268609 0.00053 18_[+1]_54 chr1:8272192-8272272 0.00053 44_[+1]_28 chr9:94181683-94181763 0.00053 57_[+1]_15 chr11:12972363-12972443 0.00053 49_[+1]_23 chr1:25417615-25417695 0.00053 34_[+1]_38 chr4:73555799-73555879 0.00053 46_[+1]_26 chr6:159505696-159505776 0.00053 12_[+1]_60 chr8:10556197-10556277 0.00053 24_[+1]_48 chr18:1438613-1438693 0.00053 37_[+1]_35 chr17:57773514-57773594 0.00053 21_[+1]_51 chr3:58321054-58321134 0.00053 50_[+1]_22 chr15:55542779-55542859 0.00053 49_[+1]_23 chr5:142541577-142541657 0.00054 44_[+1]_28 chr16:126343-126423 0.00054 50_[+1]_22 chr11:67297063-67297143 0.00054 26_[+1]_46 chr6:16335052-16335132 0.00054 32_[+1]_40 chr3:4946661-4946741 0.00054 28_[+1]_44 chr5:55750242-55750322 0.00054 30_[+1]_42 chr5:36373665-36373745 0.00054 33_[+1]_39 chr6:20573307-20573387 0.00054 43_[+1]_29 chr4:153400775-153400855 0.00061 39_[+1]_33 chr21:43619707-43619787 0.00061 21_[+1]_51 chr11:57202305-57202385 0.00061 50_[+1]_22 chrX:30645981-30646061 0.0007 33_[+1]_39 chr2:70154411-70154491 0.00077 60_[+1]_12 chr1:8278871-8278951 0.00081 5_[+1]_67 chr5:79695664-79695744 0.00083 25_[+1]_47 chr21:15734459-15734539 0.00084 [+1]_72 chr15:66662618-66662698 0.00092 64_[+1]_8 chr2:88399826-88399906 0.0011 46_[+1]_26 chr19:11435087-11435167 0.0011 55_[+1]_17 chr10:93389592-93389672 0.0011 21_[+1]_51 chr17:25572069-25572149 0.0011 50_[+1]_22 chr12:89556739-89556819 0.0011 8_[+1]_64 chr1:207581388-207581468 0.0011 40_[+1]_32 chr6:35674382-35674462 0.0012 23_[+1]_49 chr12:90127602-90127682 0.0012 18_[+1]_54 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGATGCAA width=8 seqs=185 chr1:54247525-54247605 ( 54) TGATGCAA 1 chr1:193080879-193080959 ( 27) TGATGCAA 1 chr1:52521394-52521474 ( 50) TGATGCAA 1 chr18:20065874-20065954 ( 23) TGATGCAA 1 chr10:80201620-80201700 ( 43) TGATGCAA 1 chr1:32961816-32961896 ( 40) TGATGCAA 1 chr1:222628916-222628996 ( 21) TGATGCAA 1 chr14:71315758-71315838 ( 20) TGATGCAA 1 chr2:55327166-55327246 ( 41) TGATGCAA 1 chr20:30624727-30624807 ( 28) TGATGCAA 1 chr1:92981629-92981709 ( 28) TGATGCAA 1 chr3:195782790-195782870 ( 41) TGATGCAA 1 chr12:57623918-57623998 ( 35) TGATGCAA 1 chr3:136676701-136676781 ( 48) TGATGCAA 1 chr5:138038313-138038393 ( 28) TGATGCAA 1 chr17:32674262-32674342 ( 29) TGATGCAA 1 chr4:83047089-83047169 ( 31) TGATGCAA 1 chr4:123795538-123795618 ( 35) TGATGCAA 1 chr14:57075544-57075624 ( 7) TGATGCAA 1 chr22:21428753-21428833 ( 49) TGATGCAA 1 chr11:88111761-88111841 ( 52) TGATGCAA 1 chr2:223846893-223846973 ( 57) TGATGCAA 1 chr9:117080253-117080333 ( 22) TGATGCAA 1 chr8:16423327-16423407 ( 30) TGATGCAA 1 chr7:129338947-129339027 ( 25) TGATGCAA 1 chr1:37906403-37906483 ( 52) TGATGCAA 1 chr19:15411635-15411715 ( 20) TGATGCAA 1 chr19:47397357-47397437 ( 39) TGATGCAA 1 chr3:185821900-185821980 ( 9) TGATGCAA 1 chr15:58525742-58525822 ( 17) TGATGCAA 1 chr10:90846674-90846754 ( 25) TGATGCAA 1 chr15:75009120-75009200 ( 54) TGATGCAA 1 chr2:72161858-72161938 ( 49) TGATGCAA 1 chr5:53290100-53290180 ( 23) TGATGCAA 1 chr5:5598866-5598946 ( 46) TGATGCAA 1 chr19:45091780-45091860 ( 51) TGATGCAA 1 chr3:197036623-197036703 ( 25) TGATGCAA 1 chr10:115785240-11578532 ( 23) TGATGCAA 1 chr12:48934023-48934103 ( 6) TGATGCAA 1 chr6:3339289-3339369 ( 47) TGATGCAA 1 chr15:58708015-58708095 ( 48) TGATGCAA 1 chr6:36258505-36258585 ( 33) TGATGCAA 1 chr11:72673306-72673386 ( 24) TGATGCAA 1 chr1:180023256-180023336 ( 50) TGATGCAA 1 chr2:145463386-145463466 ( 27) TGATGCAA 1 chr1:243376493-243376573 ( 38) TGATGCAA 1 chr6:36634972-36635052 ( 43) TGATGCAA 1 chr21:40211652-40211732 ( 23) TGATGCAA 1 chr4:96170349-96170429 ( 35) TGATGCAA 1 chr2:85932848-85932928 ( 48) TGATGCAA 1 chr10:15745581-15745661 ( 25) TGATGCAA 1 chr1:61586758-61586838 ( 54) TGATGCAA 1 chrX:133738254-133738334 ( 24) TGATGCAA 1 chr15:80609943-80610023 ( 50) TGATGCAA 1 chr6:53494893-53494973 ( 37) TGATGCAA 1 chr11:93141128-93141208 ( 36) TGATGCAA 1 chr21:40635513-40635593 ( 48) TGATGCAA 1 chr6:117719175-117719255 ( 7) TGATGCAA 1 chr15:68828836-68828916 ( 23) TGATGCAA 1 chr2:123148154-123148234 ( 45) TGATGCAA 1 chr4:188538424-188538504 ( 25) TGATGCAA 1 chr14:24163893-24163973 ( 27) TGATGCAA 1 chr3:15329201-15329281 ( 31) TGATGCAA 1 chr12:48275805-48275885 ( 56) TGATGCAA 1 chr6:4382730-4382810 ( 28) TGATGCAA 1 chr15:51536958-51537038 ( 62) TGATGCAA 1 chr11:7621598-7621678 ( 31) TGATGCAA 1 chr6:36617771-36617851 ( 21) TGATGCAA 1 chr3:12435612-12435692 ( 19) TGATGCAA 1 chr16:84027760-84027840 ( 21) TGATGCAA 1 chr13:52098654-52098734 ( 45) TGGTGCAA 1 chr15:45643573-45643653 ( 15) TGGTGCAA 1 chr1:205876598-205876678 ( 25) TGGTGCAA 1 chr7:35566407-35566487 ( 16) TGGTGCAA 1 chr9:124860224-124860304 ( 53) TGGTGCAA 1 chr1:176210746-176210826 ( 26) TGGTGCAA 1 chr5:142105729-142105809 ( 14) TGGTGCAA 1 chr4:14969749-14969829 ( 51) TGACGCAA 1 chr4:89724868-89724948 ( 39) TTATGCAA 1 chr7:134047796-134047876 ( 63) TGACGCAA 1 chr3:46649206-46649286 ( 16) TTATGCAA 1 chr3:37177792-37177872 ( 43) TTATGCAA 1 chr8:20058443-20058523 ( 2) TTATGCAA 1 chr8:10862659-10862739 ( 53) TGACGCAA 1 chr4:141172324-141172404 ( 23) TGACGCAA 1 chr1:7018646-7018726 ( 39) TGACGCAA 1 chr7:75575171-75575251 ( 65) TGTTGCAA 1 chr1:26021678-26021758 ( 50) TGTTGCAA 1 chr1:209847377-209847457 ( 32) TGTTGCAA 1 chr3:24720157-24720237 ( 58) TGTTGCAA 1 chr11:34676564-34676644 ( 45) TGTTGCAA 1 chr6:24223468-24223548 ( 47) TGATGAAA 1 chr10:23801466-23801546 ( 22) TGATGAAA 1 chr1:153763674-153763754 ( 11) TGATGAAA 1 chr1:26813998-26814078 ( 46) TGATGAAA 1 chr10:64873933-64874013 ( 72) TGATGAAA 1 chr10:62186302-62186382 ( 32) TGATGAAA 1 chr5:32391195-32391275 ( 46) TGATGAAA 1 chr14:95990186-95990266 ( 53) TGATGAAA 1 chr7:140541309-140541389 ( 29) TGATGAAA 1 chr5:78531249-78531329 ( 33) TGATGAAA 1 chr4:141349351-141349431 ( 23) TGATGAAA 1 chr15:66023332-66023412 ( 34) TGATGAAA 1 chr18:2627940-2628020 ( 37) TGATGAAA 1 chr5:118282036-118282116 ( 31) TGATGAAA 1 chr13:52678934-52679014 ( 40) TGATGAAA 1 chr16:57709748-57709828 ( 18) TGATGAAA 1 chr1:182429790-182429870 ( 30) TGATGAAA 1 chr8:124070590-124070670 ( 38) TGATGAAA 1 chr10:21976753-21976833 ( 26) TGATGAAA 1 chr7:123635929-123636009 ( 15) TGATGAAA 1 chr8:17383201-17383281 ( 42) TGATGAAA 1 chr17:6830741-6830821 ( 29) TGATGAAA 1 chr12:113652885-11365296 ( 31) TGATGAAA 1 chr7:139865360-139865440 ( 28) TGATGAAA 1 chr12:90163115-90163195 ( 52) TGATGAAA 1 chr12:90485135-90485215 ( 50) TGATGCAT 1 chr6:43677176-43677256 ( 13) TTGTGCAA 1 chr1:109705073-109705153 ( 54) TTGTGCAA 1 chr1:38328194-38328274 ( 22) TTGTGCAA 1 chr12:93638073-93638153 ( 40) TTGTGCAA 1 chr2:54760296-54760376 ( 39) TGGCGCAA 1 chr19:18920347-18920427 ( 11) TTGTGCAA 1 chr6:162520847-162520927 ( 28) TTGTGCAA 1 chr20:48619826-48619906 ( 16) TTGTGCAA 1 chr4:74974929-74975009 ( 65) TTGTGCAA 1 chr20:49838655-49838735 ( 19) TGAGGCAA 1 chr2:69234976-69235056 ( 57) TGAAGCAA 1 chr16:20922182-20922262 ( 31) TGAAGCAA 1 chr10:11581484-11581564 ( 15) TGATGTAA 1 chr8:123701962-123702042 ( 38) TGATGTAA 1 chr6:41145606-41145686 ( 61) TGATGTAA 1 chr11:59634038-59634118 ( 66) TGATGTAA 1 chr22:17956022-17956102 ( 24) TGATGTAA 1 chr1:61524332-61524412 ( 54) TGATGTAA 1 chr10:89856982-89857062 ( 47) TGATGTAA 1 chr16:25017134-25017214 ( 11) TGGTGAAA 1 chr6:7698528-7698608 ( 12) TTACGCAA 1 chr6:157890454-157890534 ( 24) TTACGCAA 1 chr21:36147205-36147285 ( 22) TTACGCAA 1 chr10:22013698-22013778 ( 25) TTACGCAA 1 chr5:142431270-142431350 ( 32) TTACGCAA 1 chr17:7677540-7677620 ( 6) TGTCGCAA 1 chr15:67973045-67973125 ( 24) TGCTGCAA 1 chr6:149727241-149727321 ( 57) TGCTGCAA 1 chr14:103828308-10382838 ( 29) TGGAGCAA 1 chr6:136547238-136547318 ( 21) TGTTGAAA 1 chr6:125335648-125335728 ( 11) TGATGCAG 1 chr20:33268529-33268609 ( 19) TGTTGCAT 1 chr1:8272192-8272272 ( 45) TGTTGCAT 1 chr9:94181683-94181763 ( 58) TGTTGCAT 1 chr11:12972363-12972443 ( 50) TGTTGCAT 1 chr1:25417615-25417695 ( 35) TGTTGCAT 1 chr4:73555799-73555879 ( 47) TGTTGCAT 1 chr6:159505696-159505776 ( 13) TGTTGCAT 1 chr8:10556197-10556277 ( 25) TGTTGCAT 1 chr18:1438613-1438693 ( 38) TGTTGCAT 1 chr17:57773514-57773594 ( 22) TGTTGCAT 1 chr3:58321054-58321134 ( 51) TGTTGCAT 1 chr15:55542779-55542859 ( 50) TGTTGCAT 1 chr5:142541577-142541657 ( 45) TTGCGCAA 1 chr16:126343-126423 ( 51) TTGCGCAA 1 chr11:67297063-67297143 ( 27) TTGCGCAA 1 chr6:16335052-16335132 ( 33) TTGCGCAA 1 chr3:4946661-4946741 ( 29) TTGCGCAA 1 chr5:55750242-55750322 ( 31) TTGCGCAA 1 chr5:36373665-36373745 ( 34) TTGCGCAA 1 chr6:20573307-20573387 ( 44) TTGCGCAA 1 chr4:153400775-153400855 ( 40) TTAGGCAA 1 chr21:43619707-43619787 ( 22) TTAGGCAA 1 chr11:57202305-57202385 ( 51) TTAAGCAA 1 chrX:30645981-30646061 ( 34) TTATGTAA 1 chr2:70154411-70154491 ( 61) TGTTGTAA 1 chr1:8278871-8278951 ( 6) TGAGGAAA 1 chr5:79695664-79695744 ( 26) TCATGCAA 1 chr21:15734459-15734539 ( 1) TGGTGCAG 1 chr15:66662618-66662698 ( 65) TGAGGCAT 1 chr2:88399826-88399906 ( 47) TTGAGCAA 1 chr19:11435087-11435167 ( 56) TTGGGCAA 1 chr10:93389592-93389672 ( 22) TTGAGCAA 1 chr17:25572069-25572149 ( 51) TTGAGCAA 1 chr12:89556739-89556819 ( 9) TTGAGCAA 1 chr1:207581388-207581468 ( 41) TTGAGCAA 1 chr6:35674382-35674462 ( 24) TTGTGTAA 1 chr12:90127602-90127682 ( 19) TTGTGTAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.02146 E= 2.3e-197 -1418 -1418 -1418 179 -1418 -527 193 -54 124 -427 -14 -142 -259 -95 -268 148 -1418 -1418 227 -1418 -96 192 -1418 -229 177 -1418 -1418 -1418 164 -1418 -426 -194 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 185 E= 2.3e-197 0.000000 0.000000 0.000000 1.000000 0.000000 0.005405 0.794595 0.200000 0.691892 0.010811 0.189189 0.108108 0.048649 0.108108 0.032432 0.810811 0.000000 0.000000 1.000000 0.000000 0.151351 0.789189 0.000000 0.059459 1.000000 0.000000 0.000000 0.000000 0.913514 0.000000 0.010811 0.075676 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGATGCAA MEME-1 regular expression -------------------------------------------------------------------------------- T[GT]ATGCAA -------------------------------------------------------------------------------- Time 5.01 secs. ******************************************************************************** ******************************************************************************** MOTIF TTGCATCA MEME-2 width = 8 sites = 114 llr = 993 E-value = 1.0e-123 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::1:9:1a pos.-specific C :::a:19: probability G ::7:1::: matrix T aa2::9:: bits 2.3 * 2.0 * 1.8 ** * ** 1.6 ** * ** Relative 1.4 ** * ** Entropy 1.1 ** ***** (12.6 bits) 0.9 ******** 0.7 ******** 0.5 ******** 0.2 ******** 0.0 -------- Multilevel TTGCATCA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:177989614-177989694 44 1.88e-05 ACGAGAAATA TTGCATCA TAGTGGTTAA chr2:217126008-217126088 51 1.88e-05 tgcctcgttc ttgcatca ctccagcctc chr2:106072261-106072341 37 1.88e-05 TTTCTACTGA TTGCATCA GAGAGCAGAG chr4:14969749-14969829 62 1.88e-05 gacgcAATCG TTGCATCA GAAGATGAGT chr5:145061367-145061447 46 1.88e-05 ACAGTAAATA TTGCATCA TACCCAGCTT chr7:144559790-144559870 48 1.88e-05 tttcagaaca ttgcatca tgtcaaaaag chr5:118658879-118658959 47 1.88e-05 gtccatctga ttgcatca tcctttgctt chr15:67973045-67973125 44 1.88e-05 caaagaTTTA TTGCATCA TCGTTAAAAA chr10:64873933-64874013 23 1.88e-05 ACATCTGAGG TTGCATCA TTCTTCCCGT chr7:134047796-134047876 46 1.88e-05 CTTCTATTTC TTGCATCA GCCCCTGGCT chr17:14112715-14112795 41 1.88e-05 tgacgctaga ttgcatca cactaagtac chr17:53750214-53750294 27 1.88e-05 gtcttctcta ttgcatca tcaggctgca chr15:45643573-45643653 58 1.88e-05 ATTTCAATAG TTGCATCA TCCTACTTAC chr12:57623918-57623998 57 1.88e-05 GCTTCACTGC TTGCATCA GGCAGGGGTC chr21:15734459-15734539 35 1.88e-05 AGTTTTCTGA TTGCATCA TCCTGACCAT chr15:43834124-43834204 27 1.88e-05 gtgctgtata ttgcatca tactggaggc chr1:209847377-209847457 42 1.88e-05 TGTTGCAAGA TTGCATCA CTGACCTTTG chr17:2185870-2185950 48 1.88e-05 GTTTGGCTCA TTGCATCA TTCTCAGGAA chrX:119490086-119490166 57 1.88e-05 tgacatccca ttgcatca tatcagcagg chr2:32398108-32398188 35 1.88e-05 attgtttttc ttgcatca tgcatcattc chr2:135814523-135814603 42 1.88e-05 TGCTGTTAGA TTGCATCA TACTTAGCTT chr6:125335648-125335728 50 1.88e-05 tctgtgatga ttgcatca tctcactgta chr16:24269500-24269580 46 1.88e-05 CAGTGTAATA TTGCATCA TTCTCTGGCC chr10:71029672-71029752 39 1.88e-05 GACTAATTGA TTGCATCA TAGAATCCTT chr2:178052491-178052571 40 1.88e-05 gctttctgca ttgcatca tccggatccc chr1:84305442-84305522 50 1.88e-05 CAGCTATGAA TTGCATCA TGTCCAGTAC chr6:144629167-144629247 37 1.88e-05 tgccatcgga ttgcatca ccaactcaac chr15:66662618-66662698 44 1.88e-05 GCAATTGAAA TTGCATCA TCTTTCACCT chr12:50226748-50226828 52 1.88e-05 ttatgccaga ttgcatca tccagcatat chr2:158333993-158334073 32 1.88e-05 CTCCATAGAG TTGCATCA TTCAGAACAA chr3:127729217-127729297 49 1.88e-05 ttcaggatca ttgcatca tgttggttgc chr2:62266650-62266730 38 1.88e-05 TAAGCTGCTC TTGCATCA TACCACCATG chr14:103828308-10382838 49 1.88e-05 tagcaagaga ttgcatca tgctcctcag chr22:17291246-17291326 28 1.88e-05 tttcttttca ttgcatca tttctattaa chr2:69234976-69235056 35 1.88e-05 TTTCAAAAGA TTGCATCA GGAGGAAGAG chr5:78614942-78615022 25 1.88e-05 ACCCTAGACA TTGCATCA GCATTTTGTA chr12:48934023-48934103 61 1.88e-05 ccaggccacc ttgcatca tactgctaag chr11:102631282-10263136 45 1.88e-05 TTACTAGGTA TTGcatca ttgtataatc chr21:43619707-43619787 47 1.88e-05 ACACATGGAA TTGCATCA TGCTGATTTT chr18:29291537-29291617 25 1.88e-05 TGCACAGAAA TTGCATCA TATACCATAC chr5:79695664-79695744 51 1.88e-05 TATGCAGAGA TTGCATCA TAAATGTGAG chr6:41145606-41145686 48 1.88e-05 TGCCTCCATG TTGCATCA ACCACTGATG chr20:48619826-48619906 51 1.88e-05 ttctagaaca ttgcatca cctgaagagg chr9:100639216-100639296 20 1.88e-05 CTGAATGAAC TTGCATCA CTAACCTCAG chrX:151065776-151065856 35 1.88e-05 cagtgaatga ttgcatca tcctcacagt chr6:117719175-117719255 60 1.88e-05 ACAAGCATCA TTGCATCA CTCCTCGGCT chr22:29195330-29195410 25 1.88e-05 CTCTCCTATA TTGCATCA TCCGTCCACC chr12:90485135-90485215 24 1.88e-05 GGACTTTATG TTGCATCA TAACCCAGCC chr2:70154411-70154491 3 1.88e-05 CA TTGCATCA CTCTTATTGT chr1:33515917-33515997 37 4.51e-05 tggctccaga tttcatca tgctgctcat chr13:52098654-52098734 55 4.51e-05 tggtgcaaga tttcatca tgcggctcag chr8:124629045-124629125 45 4.51e-05 TCTGGTACAA TTTCATCA TCTCTTTGCC chr2:183897073-183897153 49 4.51e-05 catcagatga tttcatca ttgtgtgaac chr20:18565909-18565989 25 4.51e-05 tttcctggga tttcatca tgtaagcatg chr1:38328194-38328274 14 4.51e-05 cattaggtga tttcatca ttgtgcaaac chr1:205876598-205876678 35 4.51e-05 tggtgcaaga tttcatca tgctacccaa chr5:53290100-53290180 49 4.51e-05 TACCAAATTC TTTCATCA TATTTAGGAG chr2:54760296-54760376 49 4.51e-05 tggcgcaaga tttcatca cagtgctcag chr8:10862659-10862739 63 4.51e-05 tgacgcaaga tttcatca tgctgctcaa chr6:110462155-110462235 39 4.51e-05 tggcacaaga tttcatca tgctactcag chr3:36689182-36689262 40 4.51e-05 TGCCTGACAC TTTCATCA TCCCTATGAT chr1:243376493-243376573 64 4.51e-05 taaatcacta tttcatca ttctttagt chr6:136547238-136547318 58 4.51e-05 TATCCCTGGC TTTCATCA TTGAATTTCA chr10:119522361-11952244 68 4.51e-05 TTGCAATGGG TTTCATCA ACCAG chr15:52089180-52089260 45 4.51e-05 gaccataaga tttcatca taccactcag chr6:6556925-6557005 52 4.51e-05 CGTCAGTGTA TTTCATCA GATGTTCTTC chr1:176210746-176210826 36 4.51e-05 tggtgcaaga tttcatca tgcttctcag chr22:17956022-17956102 58 4.51e-05 CGCAATCACC TTTCATCA GCCATGTAGG chr3:36721073-36721153 51 4.51e-05 tgacacaata tttcatca tgctactcaa chr5:142105729-142105809 49 4.51e-05 tttcagaaca tttcatca ccccaaaaag chr19:33839321-33839401 27 4.51e-05 AGCTGGGAAA TTTCatca gcctgggcaa chr10:23801466-23801546 32 7.20e-05 tgatgaaatc ttgcgtca tcctgctcca chr18:54801927-54802007 25 7.20e-05 GACCTAGAGG TTGCGTCA TCCCCTGAGA chr1:26813998-26814078 56 7.20e-05 tgatgaaatc ttgcacca tctctgtccc chr2:208176433-208176513 50 7.20e-05 AGACATATTG TTGCGTCA TCTGAAGGCC chr11:93141128-93141208 14 7.20e-05 ATTGTATGTA TTGCACCA TCCAACAGTG chr8:54758883-54758963 44 7.20e-05 TTTCATTGCA TTGCACCA TCGGCCCCAT chr12:50144312-50144392 53 7.20e-05 CCTGCAATAA TTGCACCA TCTAGATCAA chr11:7621598-7621678 17 7.20e-05 CACTTGATTC TTGCACCA CAGTGCTGAT chr1:8278871-8278951 29 7.20e-05 GACTTGGTTA TTGCGTCA CTCTGAAGGT chr7:139865360-139865440 38 7.20e-05 tgatgaaatc ttgcacca tcccatctag chr2:88399826-88399906 34 1.25e-04 TGACACTCCC TTACATCA TCAAATTGAG chr20:33268529-33268609 46 1.25e-04 GTGAAGTGTA TTAcatca taaaaagtgg chr2:47747433-47747513 55 1.25e-04 TTTCATCTCA TTGCATAA TACTACACCA chr21:30590238-30590318 12 1.25e-04 TTTCCTGGAA TTACATCA TATTGATGAC chr4:153400775-153400855 62 1.25e-04 acacccaagg ttacatca ttccgcatta chr2:33090788-33090868 56 1.25e-04 TTTCTGATGG TTACATCA GAGATCTGGG chr6:149727241-149727321 37 1.25e-04 ACTCATAGTG TTACATCA TCCTCACTAG chr13:23735382-23735462 58 1.25e-04 TTGCTTGTTC TTACATCA TTACCGAGTA chr9:37290942-37291022 50 1.25e-04 atcatcactg ttacatca tccttcactt chr8:52875601-52875681 24 1.25e-04 ttagggaagg ttgcataa gctcatgaga chr1:61524332-61524412 14 1.25e-04 TGACACAGTA TTGCATAA TAATAACTTA chr1:116520413-116520493 17 1.25e-04 TGCTTAAAGC TTGCATAA GACAGTGGCT chr16:81876995-81877075 48 1.25e-04 ttgcaatata ttacatca tattacacag chr5:142382377-142382457 41 1.25e-04 TGCAAGGAAA TTGCATAA CATTGCAGCA chr4:188538424-188538504 60 1.38e-04 AGCTAGAGTA TTGCCTCA TTCTGCTACT chr5:32531844-32531924 48 1.38e-04 CTTACAGGAA TTGCCTCA CTCACACTTT chr19:11435087-11435167 23 1.57e-04 GCTGGGAACG TTGCTTCA TTTCCTTTTC chr14:57075544-57075624 50 1.57e-04 CTAATATTAT TTGCTTCA CTCAGCTTTC chr20:49838655-49838735 39 1.57e-04 CCGGCAATGA TTGCTTCA GCTAGGAAGT chr1:92981629-92981709 51 2.14e-04 TATCGCAATA TTGCAACA CACAATTTAT chr12:90127602-90127682 60 2.14e-04 tgcgcttcaa tttcgtca tctgtaaaaa chr19:18920347-18920427 46 2.14e-04 ttccagacta tttcgtca ccccgtaaag chr7:35566407-35566487 38 2.14e-04 ttgccatcga ttgcaaca tatttctcct chr17:25572069-25572149 31 2.14e-04 GCTTGGGGAA TTGCAACA CAGGAAGAGA chr19:45091780-45091860 29 2.60e-04 ATAGTTAAAA TTTCATAA ATTAAATGTG chr1:182429790-182429870 58 2.79e-04 taggaatctg tttcctca tctagacaac chr3:5168470-5168550 33 3.55e-04 CTGGCAGTTA TTGCACAA TAAGTCATGT chr14:74252663-74252743 26 3.55e-04 TACCGAGGTC TTGCACAA TAGCCTGTGT chr6:88441650-88441730 53 3.55e-04 TTCTGAATCA TTGCGTAA TAGGTTTCTG chr16:57709748-57709828 52 3.55e-04 agtgtgacgg ttgcacaa cattgtgact chr12:27702816-27702896 49 3.55e-04 TAAGCTGATG TTGCGTAA CCTCCCGGAG chr16:84027760-84027840 56 3.55e-04 GTCCACTGTC TTGCGTAA TAAATGCCTG chr1:9350325-9350405 65 3.64e-04 TTGCTCAACA TTGCCCCA TGCTGCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:177989614-177989694 1.9e-05 43_[+2]_29 chr2:217126008-217126088 1.9e-05 50_[+2]_22 chr2:106072261-106072341 1.9e-05 36_[+2]_36 chr4:14969749-14969829 1.9e-05 61_[+2]_11 chr5:145061367-145061447 1.9e-05 45_[+2]_27 chr7:144559790-144559870 1.9e-05 47_[+2]_25 chr5:118658879-118658959 1.9e-05 46_[+2]_26 chr15:67973045-67973125 1.9e-05 43_[+2]_29 chr10:64873933-64874013 1.9e-05 22_[+2]_50 chr7:134047796-134047876 1.9e-05 45_[+2]_27 chr17:14112715-14112795 1.9e-05 40_[+2]_32 chr17:53750214-53750294 1.9e-05 26_[+2]_46 chr15:45643573-45643653 1.9e-05 57_[+2]_15 chr12:57623918-57623998 1.9e-05 56_[+2]_16 chr21:15734459-15734539 1.9e-05 34_[+2]_38 chr15:43834124-43834204 1.9e-05 26_[+2]_46 chr1:209847377-209847457 1.9e-05 41_[+2]_31 chr17:2185870-2185950 1.9e-05 47_[+2]_25 chrX:119490086-119490166 1.9e-05 56_[+2]_16 chr2:32398108-32398188 1.9e-05 34_[+2]_38 chr2:135814523-135814603 1.9e-05 41_[+2]_31 chr6:125335648-125335728 1.9e-05 49_[+2]_23 chr16:24269500-24269580 1.9e-05 45_[+2]_27 chr10:71029672-71029752 1.9e-05 38_[+2]_34 chr2:178052491-178052571 1.9e-05 39_[+2]_33 chr1:84305442-84305522 1.9e-05 49_[+2]_23 chr6:144629167-144629247 1.9e-05 36_[+2]_36 chr15:66662618-66662698 1.9e-05 43_[+2]_29 chr12:50226748-50226828 1.9e-05 51_[+2]_21 chr2:158333993-158334073 1.9e-05 31_[+2]_41 chr3:127729217-127729297 1.9e-05 48_[+2]_24 chr2:62266650-62266730 1.9e-05 37_[+2]_35 chr14:103828308-10382838 1.9e-05 48_[+2]_24 chr22:17291246-17291326 1.9e-05 27_[+2]_45 chr2:69234976-69235056 1.9e-05 34_[+2]_38 chr5:78614942-78615022 1.9e-05 24_[+2]_48 chr12:48934023-48934103 1.9e-05 60_[+2]_12 chr11:102631282-10263136 1.9e-05 44_[+2]_28 chr21:43619707-43619787 1.9e-05 46_[+2]_26 chr18:29291537-29291617 1.9e-05 24_[+2]_48 chr5:79695664-79695744 1.9e-05 50_[+2]_22 chr6:41145606-41145686 1.9e-05 47_[+2]_25 chr20:48619826-48619906 1.9e-05 50_[+2]_22 chr9:100639216-100639296 1.9e-05 19_[+2]_53 chrX:151065776-151065856 1.9e-05 34_[+2]_38 chr6:117719175-117719255 1.9e-05 59_[+2]_13 chr22:29195330-29195410 1.9e-05 24_[+2]_48 chr12:90485135-90485215 1.9e-05 23_[+2]_49 chr2:70154411-70154491 1.9e-05 2_[+2]_70 chr1:33515917-33515997 4.5e-05 36_[+2]_36 chr13:52098654-52098734 4.5e-05 54_[+2]_18 chr8:124629045-124629125 4.5e-05 44_[+2]_28 chr2:183897073-183897153 4.5e-05 48_[+2]_24 chr20:18565909-18565989 4.5e-05 24_[+2]_48 chr1:38328194-38328274 4.5e-05 13_[+2]_59 chr1:205876598-205876678 4.5e-05 34_[+2]_38 chr5:53290100-53290180 4.5e-05 48_[+2]_24 chr2:54760296-54760376 4.5e-05 48_[+2]_24 chr8:10862659-10862739 4.5e-05 62_[+2]_10 chr6:110462155-110462235 4.5e-05 38_[+2]_34 chr3:36689182-36689262 4.5e-05 39_[+2]_33 chr1:243376493-243376573 4.5e-05 63_[+2]_9 chr6:136547238-136547318 4.5e-05 57_[+2]_15 chr10:119522361-11952244 4.5e-05 67_[+2]_5 chr15:52089180-52089260 4.5e-05 44_[+2]_28 chr6:6556925-6557005 4.5e-05 51_[+2]_21 chr1:176210746-176210826 4.5e-05 35_[+2]_37 chr22:17956022-17956102 4.5e-05 57_[+2]_15 chr3:36721073-36721153 4.5e-05 50_[+2]_22 chr5:142105729-142105809 4.5e-05 48_[+2]_24 chr19:33839321-33839401 4.5e-05 26_[+2]_46 chr10:23801466-23801546 7.2e-05 31_[+2]_41 chr18:54801927-54802007 7.2e-05 24_[+2]_48 chr1:26813998-26814078 7.2e-05 55_[+2]_17 chr2:208176433-208176513 7.2e-05 49_[+2]_23 chr11:93141128-93141208 7.2e-05 13_[+2]_59 chr8:54758883-54758963 7.2e-05 43_[+2]_29 chr12:50144312-50144392 7.2e-05 52_[+2]_20 chr11:7621598-7621678 7.2e-05 16_[+2]_56 chr1:8278871-8278951 7.2e-05 28_[+2]_44 chr7:139865360-139865440 7.2e-05 37_[+2]_35 chr2:88399826-88399906 0.00013 33_[+2]_39 chr20:33268529-33268609 0.00013 45_[+2]_27 chr2:47747433-47747513 0.00013 54_[+2]_18 chr21:30590238-30590318 0.00013 11_[+2]_61 chr4:153400775-153400855 0.00013 61_[+2]_11 chr2:33090788-33090868 0.00013 55_[+2]_17 chr6:149727241-149727321 0.00013 36_[+2]_36 chr13:23735382-23735462 0.00013 57_[+2]_15 chr9:37290942-37291022 0.00013 49_[+2]_23 chr8:52875601-52875681 0.00013 23_[+2]_49 chr1:61524332-61524412 0.00013 13_[+2]_59 chr1:116520413-116520493 0.00013 16_[+2]_56 chr16:81876995-81877075 0.00013 47_[+2]_25 chr5:142382377-142382457 0.00013 40_[+2]_32 chr4:188538424-188538504 0.00014 59_[+2]_13 chr5:32531844-32531924 0.00014 47_[+2]_25 chr19:11435087-11435167 0.00016 22_[+2]_50 chr14:57075544-57075624 0.00016 49_[+2]_23 chr20:49838655-49838735 0.00016 38_[+2]_34 chr1:92981629-92981709 0.00021 50_[+2]_22 chr12:90127602-90127682 0.00021 59_[+2]_13 chr19:18920347-18920427 0.00021 45_[+2]_27 chr7:35566407-35566487 0.00021 37_[+2]_35 chr17:25572069-25572149 0.00021 30_[+2]_42 chr19:45091780-45091860 0.00026 28_[+2]_44 chr1:182429790-182429870 0.00028 57_[+2]_15 chr3:5168470-5168550 0.00035 32_[+2]_40 chr14:74252663-74252743 0.00035 25_[+2]_47 chr6:88441650-88441730 0.00035 52_[+2]_20 chr16:57709748-57709828 0.00035 51_[+2]_21 chr12:27702816-27702896 0.00035 48_[+2]_24 chr16:84027760-84027840 0.00035 55_[+2]_17 chr1:9350325-9350405 0.00036 64_[+2]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTGCATCA width=8 seqs=114 chr3:177989614-177989694 ( 44) TTGCATCA 1 chr2:217126008-217126088 ( 51) TTGCATCA 1 chr2:106072261-106072341 ( 37) TTGCATCA 1 chr4:14969749-14969829 ( 62) TTGCATCA 1 chr5:145061367-145061447 ( 46) TTGCATCA 1 chr7:144559790-144559870 ( 48) TTGCATCA 1 chr5:118658879-118658959 ( 47) TTGCATCA 1 chr15:67973045-67973125 ( 44) TTGCATCA 1 chr10:64873933-64874013 ( 23) TTGCATCA 1 chr7:134047796-134047876 ( 46) TTGCATCA 1 chr17:14112715-14112795 ( 41) TTGCATCA 1 chr17:53750214-53750294 ( 27) TTGCATCA 1 chr15:45643573-45643653 ( 58) TTGCATCA 1 chr12:57623918-57623998 ( 57) TTGCATCA 1 chr21:15734459-15734539 ( 35) TTGCATCA 1 chr15:43834124-43834204 ( 27) TTGCATCA 1 chr1:209847377-209847457 ( 42) TTGCATCA 1 chr17:2185870-2185950 ( 48) TTGCATCA 1 chrX:119490086-119490166 ( 57) TTGCATCA 1 chr2:32398108-32398188 ( 35) TTGCATCA 1 chr2:135814523-135814603 ( 42) TTGCATCA 1 chr6:125335648-125335728 ( 50) TTGCATCA 1 chr16:24269500-24269580 ( 46) TTGCATCA 1 chr10:71029672-71029752 ( 39) TTGCATCA 1 chr2:178052491-178052571 ( 40) TTGCATCA 1 chr1:84305442-84305522 ( 50) TTGCATCA 1 chr6:144629167-144629247 ( 37) TTGCATCA 1 chr15:66662618-66662698 ( 44) TTGCATCA 1 chr12:50226748-50226828 ( 52) TTGCATCA 1 chr2:158333993-158334073 ( 32) TTGCATCA 1 chr3:127729217-127729297 ( 49) TTGCATCA 1 chr2:62266650-62266730 ( 38) TTGCATCA 1 chr14:103828308-10382838 ( 49) TTGCATCA 1 chr22:17291246-17291326 ( 28) TTGCATCA 1 chr2:69234976-69235056 ( 35) TTGCATCA 1 chr5:78614942-78615022 ( 25) TTGCATCA 1 chr12:48934023-48934103 ( 61) TTGCATCA 1 chr11:102631282-10263136 ( 45) TTGCATCA 1 chr21:43619707-43619787 ( 47) TTGCATCA 1 chr18:29291537-29291617 ( 25) TTGCATCA 1 chr5:79695664-79695744 ( 51) TTGCATCA 1 chr6:41145606-41145686 ( 48) TTGCATCA 1 chr20:48619826-48619906 ( 51) TTGCATCA 1 chr9:100639216-100639296 ( 20) TTGCATCA 1 chrX:151065776-151065856 ( 35) TTGCATCA 1 chr6:117719175-117719255 ( 60) TTGCATCA 1 chr22:29195330-29195410 ( 25) TTGCATCA 1 chr12:90485135-90485215 ( 24) TTGCATCA 1 chr2:70154411-70154491 ( 3) TTGCATCA 1 chr1:33515917-33515997 ( 37) TTTCATCA 1 chr13:52098654-52098734 ( 55) TTTCATCA 1 chr8:124629045-124629125 ( 45) TTTCATCA 1 chr2:183897073-183897153 ( 49) TTTCATCA 1 chr20:18565909-18565989 ( 25) TTTCATCA 1 chr1:38328194-38328274 ( 14) TTTCATCA 1 chr1:205876598-205876678 ( 35) TTTCATCA 1 chr5:53290100-53290180 ( 49) TTTCATCA 1 chr2:54760296-54760376 ( 49) TTTCATCA 1 chr8:10862659-10862739 ( 63) TTTCATCA 1 chr6:110462155-110462235 ( 39) TTTCATCA 1 chr3:36689182-36689262 ( 40) TTTCATCA 1 chr1:243376493-243376573 ( 64) TTTCATCA 1 chr6:136547238-136547318 ( 58) TTTCATCA 1 chr10:119522361-11952244 ( 68) TTTCATCA 1 chr15:52089180-52089260 ( 45) TTTCATCA 1 chr6:6556925-6557005 ( 52) TTTCATCA 1 chr1:176210746-176210826 ( 36) TTTCATCA 1 chr22:17956022-17956102 ( 58) TTTCATCA 1 chr3:36721073-36721153 ( 51) TTTCATCA 1 chr5:142105729-142105809 ( 49) TTTCATCA 1 chr19:33839321-33839401 ( 27) TTTCATCA 1 chr10:23801466-23801546 ( 32) TTGCGTCA 1 chr18:54801927-54802007 ( 25) TTGCGTCA 1 chr1:26813998-26814078 ( 56) TTGCACCA 1 chr2:208176433-208176513 ( 50) TTGCGTCA 1 chr11:93141128-93141208 ( 14) TTGCACCA 1 chr8:54758883-54758963 ( 44) TTGCACCA 1 chr12:50144312-50144392 ( 53) TTGCACCA 1 chr11:7621598-7621678 ( 17) TTGCACCA 1 chr1:8278871-8278951 ( 29) TTGCGTCA 1 chr7:139865360-139865440 ( 38) TTGCACCA 1 chr2:88399826-88399906 ( 34) TTACATCA 1 chr20:33268529-33268609 ( 46) TTACATCA 1 chr2:47747433-47747513 ( 55) TTGCATAA 1 chr21:30590238-30590318 ( 12) TTACATCA 1 chr4:153400775-153400855 ( 62) TTACATCA 1 chr2:33090788-33090868 ( 56) TTACATCA 1 chr6:149727241-149727321 ( 37) TTACATCA 1 chr13:23735382-23735462 ( 58) TTACATCA 1 chr9:37290942-37291022 ( 50) TTACATCA 1 chr8:52875601-52875681 ( 24) TTGCATAA 1 chr1:61524332-61524412 ( 14) TTGCATAA 1 chr1:116520413-116520493 ( 17) TTGCATAA 1 chr16:81876995-81877075 ( 48) TTACATCA 1 chr5:142382377-142382457 ( 41) TTGCATAA 1 chr4:188538424-188538504 ( 60) TTGCCTCA 1 chr5:32531844-32531924 ( 48) TTGCCTCA 1 chr19:11435087-11435167 ( 23) TTGCTTCA 1 chr14:57075544-57075624 ( 50) TTGCTTCA 1 chr20:49838655-49838735 ( 39) TTGCTTCA 1 chr1:92981629-92981709 ( 51) TTGCAACA 1 chr12:90127602-90127682 ( 60) TTTCGTCA 1 chr19:18920347-18920427 ( 46) TTTCGTCA 1 chr7:35566407-35566487 ( 38) TTGCAACA 1 chr17:25572069-25572149 ( 31) TTGCAACA 1 chr19:45091780-45091860 ( 29) TTTCATAA 1 chr1:182429790-182429870 ( 58) TTTCCTCA 1 chr3:5168470-5168550 ( 33) TTGCACAA 1 chr14:74252663-74252743 ( 26) TTGCACAA 1 chr6:88441650-88441730 ( 53) TTGCGTAA 1 chr16:57709748-57709828 ( 52) TTGCACAA 1 chr12:27702816-27702896 ( 49) TTGCGTAA 1 chr16:84027760-84027840 ( 56) TTGCGTAA 1 chr1:9350325-9350405 ( 65) TTGCCCCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.94029 E= 1.0e-123 -1348 -1348 -1348 179 -1348 -1348 -1348 179 -189 -1348 174 -35 -1348 226 -1348 -1348 155 -257 -140 -346 -348 -125 -1348 161 -148 210 -1348 -1348 177 -1348 -1348 -1348 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 114 E= 1.0e-123 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.078947 0.000000 0.692982 0.228070 0.000000 1.000000 0.000000 0.000000 0.859649 0.035088 0.078947 0.026316 0.026316 0.087719 0.000000 0.885965 0.105263 0.894737 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTGCATCA MEME-2 regular expression -------------------------------------------------------------------------------- TT[GT]CATCA -------------------------------------------------------------------------------- Time 8.49 secs. ******************************************************************************** ******************************************************************************** MOTIF NNTGCAAT MEME-3 width = 8 sites = 35 llr = 284 E-value = 3.1e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A 33:::aa: pos.-specific C 32::a::: probability G 22:a:::: matrix T 23a::::a bits 2.3 ** 2.0 ** 1.8 ****** 1.6 ****** Relative 1.4 ****** Entropy 1.1 ****** (11.7 bits) 0.9 ****** 0.7 ****** 0.5 ****** 0.2 ****** 0.0 -------- Multilevel CATGCAAT consensus AT sequence TC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:33515917-33515997 60 3.26e-05 ctcataaaag catgcaat ttacaactta chr1:205876598-205876678 58 3.26e-05 cccaaaacag catgcaat ttaaaactta chr2:54760296-54760376 72 3.26e-05 ctcaggatgg catgcaat t chr6:110462155-110462235 62 3.26e-05 ctcagaatca catgcaat ttaaaactta chr2:85932848-85932928 17 3.26e-05 tgggcttgac cctgcaat gttcccagca chr15:52089180-52089260 68 3.26e-05 ctcagaacag catgcaat ttaaa chr1:176210746-176210826 59 3.26e-05 ctcagaatga catgcaat ttaagtcata chr14:24163893-24163973 48 3.26e-05 atctttctga catgcaat ccaaccgggc chr12:50144312-50144392 43 3.26e-05 CTTGTAACAA CCTGCAAT AATTGCACCA chr12:89556739-89556819 36 3.26e-05 GTGTCATCAA CATGCAAT CTCATCTGAT chr1:7018646-7018726 51 3.26e-05 ACGCAATAAG CCTGCAAT AAAACAGAGC chr6:24223468-24223548 58 6.49e-05 GATGAAACCA CGTGCAAT TTTATGGTGT chr21:15734459-15734539 62 1.11e-04 TTGCTCACAG ACTGCAAT CTATCATTGA chr19:45091780-45091860 63 1.11e-04 ATGCAAGTCT ACTGCAAT TCCTTTACTA chr15:58708015-58708095 61 1.11e-04 tgcaatgtct actgcaat attgtaatag chr7:123635929-123636009 36 1.11e-04 TGAGATGCAA AATGCAAT AATGATGATA chr19:47397357-47397437 51 1.43e-04 ATGCAATTAG GATGCAAT CCCTTGCCTG chr6:144629167-144629247 15 1.43e-04 agattcccca gctgcaat ctcctgccat chr15:58525742-58525822 55 1.43e-04 CTGGAAAGAA GATGCAAT Caggcaatta chr2:217126008-217126088 30 2.15e-04 gcttctagaa attgcaat ttctgcctcg chr15:66023332-66023412 45 2.15e-04 GATGAAATAA TCTGCAAT TCTTACAAAA chr10:119522361-11952244 57 2.15e-04 CGTGGAGGTC ATTGCAAT GGGTTTCATC chr9:124860224-124860304 63 2.15e-04 TGGTGCAAGC ATTGCAAT TACAATGCTT chr21:40635513-40635593 4 2.15e-04 tca tatgcaat gatacatatg chr16:81876995-81877075 37 2.15e-04 acatttttgg attgcaat atattacatc chr2:62266650-62266730 70 2.53e-04 GATAGCCCAA GTTGCAAT TTC chr4:188538424-188538504 36 2.53e-04 GATGCAATAG AGTGCAAT TGTGAGAGCT chr3:12435612-12435692 31 2.53e-04 ATGCAATCAA GTTGCAAT AAACTTATTT chr1:209847377-209847457 56 2.93e-04 ATCACTGACC TTTGCAAT TTTCTGGCCA chr21:30590238-30590318 43 2.93e-04 TTTATGCGCC TTTGCAAT TACAAAATTC chr5:118282036-118282116 42 2.93e-04 GATGAAACAG GGTGCAAT GACAAACAGA chr8:124070590-124070670 59 2.93e-04 AACTATTTCT TTTGCAAT GCCAACTTTC chr5:32391195-32391275 27 3.12e-04 ttttaaatct tgtgcaat tttgagcagt chr14:74252663-74252743 72 3.12e-04 AATGCCTGAC TGTGCAAT C chr6:162520847-162520927 39 3.12e-04 tgtgcaatac tgtgcaat acatcacttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:33515917-33515997 3.3e-05 59_[+3]_13 chr1:205876598-205876678 3.3e-05 57_[+3]_15 chr2:54760296-54760376 3.3e-05 71_[+3]_1 chr6:110462155-110462235 3.3e-05 61_[+3]_11 chr2:85932848-85932928 3.3e-05 16_[+3]_56 chr15:52089180-52089260 3.3e-05 67_[+3]_5 chr1:176210746-176210826 3.3e-05 58_[+3]_14 chr14:24163893-24163973 3.3e-05 47_[+3]_25 chr12:50144312-50144392 3.3e-05 42_[+3]_30 chr12:89556739-89556819 3.3e-05 35_[+3]_37 chr1:7018646-7018726 3.3e-05 50_[+3]_22 chr6:24223468-24223548 6.5e-05 57_[+3]_15 chr21:15734459-15734539 0.00011 61_[+3]_11 chr19:45091780-45091860 0.00011 62_[+3]_10 chr15:58708015-58708095 0.00011 60_[+3]_12 chr7:123635929-123636009 0.00011 35_[+3]_37 chr19:47397357-47397437 0.00014 50_[+3]_22 chr6:144629167-144629247 0.00014 14_[+3]_58 chr15:58525742-58525822 0.00014 54_[+3]_18 chr2:217126008-217126088 0.00022 29_[+3]_43 chr15:66023332-66023412 0.00022 44_[+3]_28 chr10:119522361-11952244 0.00022 56_[+3]_16 chr9:124860224-124860304 0.00022 62_[+3]_10 chr21:40635513-40635593 0.00022 3_[+3]_69 chr16:81876995-81877075 0.00022 36_[+3]_36 chr2:62266650-62266730 0.00025 69_[+3]_3 chr4:188538424-188538504 0.00025 35_[+3]_37 chr3:12435612-12435692 0.00025 30_[+3]_42 chr1:209847377-209847457 0.00029 55_[+3]_17 chr21:30590238-30590318 0.00029 42_[+3]_30 chr5:118282036-118282116 0.00029 41_[+3]_31 chr8:124070590-124070670 0.00029 58_[+3]_14 chr5:32391195-32391275 0.00031 26_[+3]_46 chr14:74252663-74252743 0.00031 71_[+3]_1 chr6:162520847-162520927 0.00031 38_[+3]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF NNTGCAAT width=8 seqs=35 chr1:33515917-33515997 ( 60) CATGCAAT 1 chr1:205876598-205876678 ( 58) CATGCAAT 1 chr2:54760296-54760376 ( 72) CATGCAAT 1 chr6:110462155-110462235 ( 62) CATGCAAT 1 chr2:85932848-85932928 ( 17) CCTGCAAT 1 chr15:52089180-52089260 ( 68) CATGCAAT 1 chr1:176210746-176210826 ( 59) CATGCAAT 1 chr14:24163893-24163973 ( 48) CATGCAAT 1 chr12:50144312-50144392 ( 43) CCTGCAAT 1 chr12:89556739-89556819 ( 36) CATGCAAT 1 chr1:7018646-7018726 ( 51) CCTGCAAT 1 chr6:24223468-24223548 ( 58) CGTGCAAT 1 chr21:15734459-15734539 ( 62) ACTGCAAT 1 chr19:45091780-45091860 ( 63) ACTGCAAT 1 chr15:58708015-58708095 ( 61) ACTGCAAT 1 chr7:123635929-123636009 ( 36) AATGCAAT 1 chr19:47397357-47397437 ( 51) GATGCAAT 1 chr6:144629167-144629247 ( 15) GCTGCAAT 1 chr15:58525742-58525822 ( 55) GATGCAAT 1 chr2:217126008-217126088 ( 30) ATTGCAAT 1 chr15:66023332-66023412 ( 45) TCTGCAAT 1 chr10:119522361-11952244 ( 57) ATTGCAAT 1 chr9:124860224-124860304 ( 63) ATTGCAAT 1 chr21:40635513-40635593 ( 4) TATGCAAT 1 chr16:81876995-81877075 ( 37) ATTGCAAT 1 chr2:62266650-62266730 ( 70) GTTGCAAT 1 chr4:188538424-188538504 ( 36) AGTGCAAT 1 chr3:12435612-12435692 ( 31) GTTGCAAT 1 chr1:209847377-209847457 ( 56) TTTGCAAT 1 chr21:30590238-30590318 ( 43) TTTGCAAT 1 chr5:118282036-118282116 ( 42) GGTGCAAT 1 chr8:124070590-124070670 ( 59) TTTGCAAT 1 chr5:32391195-32391275 ( 27) TGTGCAAT 1 chr14:74252663-74252743 ( 72) TGTGCAAT 1 chr6:162520847-162520927 ( 39) TGTGCAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.84661 E= 3.1e+000 -19 72 -28 -34 22 13 -28 -17 -1177 -1177 -1177 179 -1177 -1177 226 -1177 -1177 226 -1177 -1177 177 -1177 -1177 -1177 177 -1177 -1177 -1177 -1177 -1177 -1177 179 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 35 E= 3.1e+000 0.257143 0.342857 0.171429 0.228571 0.342857 0.228571 0.171429 0.257143 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif NNTGCAAT MEME-3 regular expression -------------------------------------------------------------------------------- [CAT][ATC]TGCAAT -------------------------------------------------------------------------------- Time 11.79 secs. ******************************************************************************** ******************************************************************************** MOTIF HCCCAGGC MEME-4 width = 8 sites = 17 llr = 159 E-value = 2.3e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 2:::a3:: pos.-specific C 48aa::1a probability G :::::79: matrix T 42:::::: bits 2.3 ** * 2.0 ** ** 1.8 *** ** 1.6 *** ** Relative 1.4 **** ** Entropy 1.1 ******* (13.5 bits) 0.9 ******* 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel CCCCAGGC consensus TT A sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr21:36147205-36147285 41 4.94e-06 ATGACCTGGT CCCCAGGC TACATAATTT chr12:48934023-48934103 49 4.94e-06 agttggaaat ccccaggc caccttgcat chr3:46649206-46649286 8 1.18e-05 TACTCAG TCCCAGGC TTATGCAATC chr1:193080879-193080959 9 1.88e-05 gctctgtc acccaggc tggaatgcga chr3:195782790-195782870 23 1.88e-05 tcactctgtc acccaggc tagagtgcag chr17:2185870-2185950 19 1.88e-05 GAACCAGGGC ACCCAGGC TTACTGAGCT chr10:71029888-71029968 49 1.88e-05 tcgctatgtt acccaggc tgctctcgaa chr14:24163893-24163973 8 2.57e-05 ggagaag ccccaagc tcttacagat chr3:36721073-36721153 19 2.57e-05 atgattcata ccccaagc aggactgaac chr1:109705073-109705153 5 3.26e-05 AATG CTCCAGGC ATCACTTCAG chr3:185821900-185821980 39 3.26e-05 GCAGCATTTT CTCCAGGC CTCTCTTAAA chr17:14112715-14112795 20 4.23e-05 ataattcagg tcccaagc aggtgacgct chr3:146224527-146224607 48 4.23e-05 aacagacaga tcccaagc agaccatttt chr8:10862659-10862739 41 4.23e-05 atgattcaca tcccaagc agaatgacgc chr1:205876598-205876678 1 5.19e-05 . ttccaggc agaacataca chr6:110462155-110462235 17 5.19e-05 atgaatcaca ttccaggc aggatggcac chr5:55750242-55750322 44 8.60e-05 CGCAATAGTG CCCCAGCC CGGATGAATG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:36147205-36147285 4.9e-06 40_[+4]_32 chr12:48934023-48934103 4.9e-06 48_[+4]_24 chr3:46649206-46649286 1.2e-05 7_[+4]_65 chr1:193080879-193080959 1.9e-05 8_[+4]_64 chr3:195782790-195782870 1.9e-05 22_[+4]_50 chr17:2185870-2185950 1.9e-05 18_[+4]_54 chr10:71029888-71029968 1.9e-05 48_[+4]_24 chr14:24163893-24163973 2.6e-05 7_[+4]_65 chr3:36721073-36721153 2.6e-05 18_[+4]_54 chr1:109705073-109705153 3.3e-05 4_[+4]_68 chr3:185821900-185821980 3.3e-05 38_[+4]_34 chr17:14112715-14112795 4.2e-05 19_[+4]_53 chr3:146224527-146224607 4.2e-05 47_[+4]_25 chr8:10862659-10862739 4.2e-05 40_[+4]_32 chr1:205876598-205876678 5.2e-05 [+4]_72 chr6:110462155-110462235 5.2e-05 16_[+4]_56 chr5:55750242-55750322 8.6e-05 43_[+4]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF HCCCAGGC width=8 seqs=17 chr21:36147205-36147285 ( 41) CCCCAGGC 1 chr12:48934023-48934103 ( 49) CCCCAGGC 1 chr3:46649206-46649286 ( 8) TCCCAGGC 1 chr1:193080879-193080959 ( 9) ACCCAGGC 1 chr3:195782790-195782870 ( 23) ACCCAGGC 1 chr17:2185870-2185950 ( 19) ACCCAGGC 1 chr10:71029888-71029968 ( 49) ACCCAGGC 1 chr14:24163893-24163973 ( 8) CCCCAAGC 1 chr3:36721073-36721153 ( 19) CCCCAAGC 1 chr1:109705073-109705153 ( 5) CTCCAGGC 1 chr3:185821900-185821980 ( 39) CTCCAGGC 1 chr17:14112715-14112795 ( 20) TCCCAAGC 1 chr3:146224527-146224607 ( 48) TCCCAAGC 1 chr8:10862659-10862739 ( 41) TCCCAAGC 1 chr1:205876598-205876678 ( 1) TTCCAGGC 1 chr6:110462155-110462235 ( 17) TTCCAGGC 1 chr5:55750242-55750322 ( 44) CCCCAGCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.1364 E= 2.3e+002 -32 98 -1073 28 -1073 187 -1073 -30 -1073 226 -1073 -1073 -1073 226 -1073 -1073 177 -1073 -1073 -1073 0 -1073 176 -1073 -1073 -182 218 -1073 -1073 226 -1073 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 17 E= 2.3e+002 0.235294 0.411765 0.000000 0.352941 0.000000 0.764706 0.000000 0.235294 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.294118 0.000000 0.705882 0.000000 0.000000 0.058824 0.941176 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif HCCCAGGC MEME-4 regular expression -------------------------------------------------------------------------------- [CTA][CT]CCA[GA]GC -------------------------------------------------------------------------------- Time 15.04 secs. ******************************************************************************** ******************************************************************************** MOTIF VTKACWCA MEME-5 width = 8 sites = 45 llr = 346 E-value = 2.0e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 Description -------------------------------------------------------------------------------- Simplified A 4::6:6:a pos.-specific C 2::1a:a: probability G 4:53:::: matrix T :a5::4:: bits 2.3 * * 2.0 * * 1.8 * * ** 1.6 * * ** Relative 1.4 * * ** Entropy 1.1 ** * ** (11.1 bits) 0.9 ** **** 0.7 ******* 0.5 ******** 0.2 ******** 0.0 -------- Multilevel GTGACACA consensus A TG T sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:16423327-16423407 2 1.37e-05 t gtgacaca gacaatgaca chr2:158333993-158334073 55 1.37e-05 AACAATAACA GTGACACA TAGTTCTCTG chr4:96170349-96170429 69 1.37e-05 ccatcattaa gtgacaca tgac chr10:15745581-15745661 37 1.37e-05 ATGCAACAGT GTGACACA CAGAGCTGGT chr8:124070590-124070670 16 1.37e-05 AGTTAGCAGC GTGACACA TATTTCTGTT chr10:23801466-23801546 63 3.69e-05 tgctcagggt gtgactca tccctcagtc chr17:7677540-7677620 45 3.69e-05 gggctactaa gtgactca cgggcaggga chr21:30590238-30590318 25 7.51e-05 CATCATATTG ATGACACA TTTATGCGCC chr3:146224527-146224607 9 7.51e-05 tgccaaat gttacaca atcatactga chr4:141349351-141349431 51 7.51e-05 cttgctcgaa gttacaca acatgtaaac chr16:25017134-25017214 44 7.51e-05 gtcatgcata atgacaca cattattgcg chr6:20573307-20573387 58 7.51e-05 GCAACTCATT GTTACACA TTTCCTGTTT chr18:2627940-2628020 52 7.51e-05 aaatcaccta atgacaca tttctcagaa chr1:61524332-61524412 3 7.51e-05 TA ATGACACA GTATTGCATA chr3:36721073-36721153 40 7.51e-05 actgaacaag atgacaca atatttcatc chr4:123795538-123795618 66 8.88e-05 CCAGGGGTGA CTGACACA CAGAGGT chr1:9350325-9350405 30 8.88e-05 CTGAGCCCTT CTGACACA TAAACTGGCT chr6:36634972-36635052 6 9.84e-05 AGTGG GTGGCTCA CTCTTCTGGC chr1:116520413-116520493 29 9.84e-05 GCATAAGACA GTGGCTCA ACAGGAAGAT chr3:37177792-37177872 65 1.63e-04 gtaggtgaca gttgcaca tctttgtg chr5:78614942-78615022 61 1.63e-04 TGGCTGGGAT GTTACTCA TAGCTTCTGG chr18:29291537-29291617 13 1.63e-04 ATTACCAGAG GTTGCACA GAAATTGCAT chr6:110462155-110462235 28 1.63e-04 tccaggcagg atggcaca agatttcatc chr1:61586758-61586838 4 1.63e-04 TCT GTTACTCA ATGGAGTGGA chr4:74974929-74975009 25 1.63e-04 TGTCAGGTTT ATGACTCA ACAAACTGAA chr1:84305442-84305522 6 2.13e-04 TCAAT CTGACTCA GCTTTACTCT chr6:162520847-162520927 63 2.13e-04 ctttttcctc ctgactca ctgaaagttt chr21:43619707-43619787 34 2.13e-04 AGGCAATATT ATTACACA TGGAATTGCA chr16:81876995-81877075 57 2.13e-04 attacatcat attacaca gagacaagcg chr1:38328194-38328274 67 2.42e-04 caaacctgta cttacaca attcta chr2:55327166-55327246 51 3.66e-04 TGATGCAATA CTTGCACA TATTAGAACA chr2:223846893-223846973 70 3.66e-04 TGCAACTCTA GTGCCTCA CAC chr10:71029672-71029752 17 3.66e-04 TCTAGGCAAG CTTGCACA TTCTGACTAA chr11:57202305-57202385 29 3.66e-04 gggatttggc cttactca attgtaggag chr12:89556739-89556819 63 3.66e-04 TTTATCTTCC CTTACTCA CTCAGACTCA chr2:47747433-47747513 17 3.93e-04 TCTGGGGGAA ATGCCACA GTCCGCAAGT chr10:62186302-62186382 52 3.93e-04 TGTTGCTTTA GTTCCACA GGGATGTTGA chr11:93141128-93141208 65 3.93e-04 TTGCAAATGT GTTCCACA ACAGCTAC chr6:4382730-4382810 12 4.03e-04 GGGGCTGTGG CTGCCACA GGTTCGAATG chr9:94181683-94181763 9 4.22e-04 TCAGGCAC ATTGCTCA ACGTCCGAAA chr21:15734459-15734539 51 4.22e-04 CATCCTGACC ATTGCTCA CAGACTGCAA chr5:95197218-95197298 23 4.22e-04 CGGCTGGAAT ATTGCTCA ATATTTTCAG chr11:102631282-10263136 14 4.22e-04 ATTTGGGAGC ATTGCTCA AGAAGCAGCT chr6:6556925-6557005 30 4.22e-04 CAATAAATAT ATTGCTCA AGAACGTCAG chr5:118658879-118658959 68 4.62e-04 tttgcttaaa atgcctca ttaga -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:16423327-16423407 1.4e-05 1_[+5]_71 chr2:158333993-158334073 1.4e-05 54_[+5]_18 chr4:96170349-96170429 1.4e-05 68_[+5]_4 chr10:15745581-15745661 1.4e-05 36_[+5]_36 chr8:124070590-124070670 1.4e-05 15_[+5]_57 chr10:23801466-23801546 3.7e-05 62_[+5]_10 chr17:7677540-7677620 3.7e-05 44_[+5]_28 chr21:30590238-30590318 7.5e-05 24_[+5]_48 chr3:146224527-146224607 7.5e-05 8_[+5]_64 chr4:141349351-141349431 7.5e-05 50_[+5]_22 chr16:25017134-25017214 7.5e-05 43_[+5]_29 chr6:20573307-20573387 7.5e-05 57_[+5]_15 chr18:2627940-2628020 7.5e-05 51_[+5]_21 chr1:61524332-61524412 7.5e-05 2_[+5]_70 chr3:36721073-36721153 7.5e-05 39_[+5]_33 chr4:123795538-123795618 8.9e-05 65_[+5]_7 chr1:9350325-9350405 8.9e-05 29_[+5]_43 chr6:36634972-36635052 9.8e-05 5_[+5]_67 chr1:116520413-116520493 9.8e-05 28_[+5]_44 chr3:37177792-37177872 0.00016 64_[+5]_8 chr5:78614942-78615022 0.00016 60_[+5]_12 chr18:29291537-29291617 0.00016 12_[+5]_60 chr6:110462155-110462235 0.00016 27_[+5]_45 chr1:61586758-61586838 0.00016 3_[+5]_69 chr4:74974929-74975009 0.00016 24_[+5]_48 chr1:84305442-84305522 0.00021 5_[+5]_67 chr6:162520847-162520927 0.00021 62_[+5]_10 chr21:43619707-43619787 0.00021 33_[+5]_39 chr16:81876995-81877075 0.00021 56_[+5]_16 chr1:38328194-38328274 0.00024 66_[+5]_6 chr2:55327166-55327246 0.00037 50_[+5]_22 chr2:223846893-223846973 0.00037 69_[+5]_3 chr10:71029672-71029752 0.00037 16_[+5]_56 chr11:57202305-57202385 0.00037 28_[+5]_44 chr12:89556739-89556819 0.00037 62_[+5]_10 chr2:47747433-47747513 0.00039 16_[+5]_56 chr10:62186302-62186382 0.00039 51_[+5]_21 chr11:93141128-93141208 0.00039 64_[+5]_8 chr6:4382730-4382810 0.0004 11_[+5]_61 chr9:94181683-94181763 0.00042 8_[+5]_64 chr21:15734459-15734539 0.00042 50_[+5]_22 chr5:95197218-95197298 0.00042 22_[+5]_50 chr11:102631282-10263136 0.00042 13_[+5]_59 chr6:6556925-6557005 0.00042 29_[+5]_43 chr5:118658879-118658959 0.00046 67_[+5]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VTKACWCA width=8 seqs=45 chr8:16423327-16423407 ( 2) GTGACACA 1 chr2:158333993-158334073 ( 55) GTGACACA 1 chr4:96170349-96170429 ( 69) GTGACACA 1 chr10:15745581-15745661 ( 37) GTGACACA 1 chr8:124070590-124070670 ( 16) GTGACACA 1 chr10:23801466-23801546 ( 63) GTGACTCA 1 chr17:7677540-7677620 ( 45) GTGACTCA 1 chr21:30590238-30590318 ( 25) ATGACACA 1 chr3:146224527-146224607 ( 9) GTTACACA 1 chr4:141349351-141349431 ( 51) GTTACACA 1 chr16:25017134-25017214 ( 44) ATGACACA 1 chr6:20573307-20573387 ( 58) GTTACACA 1 chr18:2627940-2628020 ( 52) ATGACACA 1 chr1:61524332-61524412 ( 3) ATGACACA 1 chr3:36721073-36721153 ( 40) ATGACACA 1 chr4:123795538-123795618 ( 66) CTGACACA 1 chr1:9350325-9350405 ( 30) CTGACACA 1 chr6:36634972-36635052 ( 6) GTGGCTCA 1 chr1:116520413-116520493 ( 29) GTGGCTCA 1 chr3:37177792-37177872 ( 65) GTTGCACA 1 chr5:78614942-78615022 ( 61) GTTACTCA 1 chr18:29291537-29291617 ( 13) GTTGCACA 1 chr6:110462155-110462235 ( 28) ATGGCACA 1 chr1:61586758-61586838 ( 4) GTTACTCA 1 chr4:74974929-74975009 ( 25) ATGACTCA 1 chr1:84305442-84305522 ( 6) CTGACTCA 1 chr6:162520847-162520927 ( 63) CTGACTCA 1 chr21:43619707-43619787 ( 34) ATTACACA 1 chr16:81876995-81877075 ( 57) ATTACACA 1 chr1:38328194-38328274 ( 67) CTTACACA 1 chr2:55327166-55327246 ( 51) CTTGCACA 1 chr2:223846893-223846973 ( 70) GTGCCTCA 1 chr10:71029672-71029752 ( 17) CTTGCACA 1 chr11:57202305-57202385 ( 29) CTTACTCA 1 chr12:89556739-89556819 ( 63) CTTACTCA 1 chr2:47747433-47747513 ( 17) ATGCCACA 1 chr10:62186302-62186382 ( 52) GTTCCACA 1 chr11:93141128-93141208 ( 65) GTTCCACA 1 chr6:4382730-4382810 ( 12) CTGCCACA 1 chr9:94181683-94181763 ( 9) ATTGCTCA 1 chr21:15734459-15734539 ( 51) ATTGCTCA 1 chr5:95197218-95197298 ( 23) ATTGCTCA 1 chr11:102631282-10263136 ( 14) ATTGCTCA 1 chr6:6556925-6557005 ( 30) ATTGCTCA 1 chr5:118658879-118658959 ( 68) ATGCCTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2095 E= 2.0e+002 28 9 102 -1214 -1214 -1214 -1214 179 -1214 -1214 136 69 103 -64 36 -1214 -1214 226 -1214 -1214 103 -1214 -1214 46 -1214 226 -1214 -1214 177 -1214 -1214 -1214 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 45 E= 2.0e+002 0.355556 0.222222 0.422222 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.533333 0.466667 0.600000 0.133333 0.266667 0.000000 0.000000 1.000000 0.000000 0.000000 0.600000 0.000000 0.000000 0.400000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VTKACWCA MEME-5 regular expression -------------------------------------------------------------------------------- [GAC]T[GT][AG]C[AT]CA -------------------------------------------------------------------------------- Time 18.25 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:142382377-142382457 3.44e-02 80 chr16:84027760-84027840 2.87e-03 20_[+1(1.90e-05)]_52 chr19:33839321-33839401 6.84e-02 26_[+2(4.51e-05)]_46 chr1:9350325-9350405 6.61e-04 29_[+5(8.88e-05)]_43 chr17:7677540-7677620 6.21e-03 44_[+5(3.69e-05)]_28 chr10:89856982-89857062 6.66e-02 80 chr5:142105729-142105809 6.51e-04 13_[+1(3.26e-05)]_27_[+2(4.51e-05)]_\ 24 chr12:90163115-90163195 4.63e-02 80 chr3:12435612-12435692 1.87e-03 18_[+1(1.90e-05)]_54 chr1:207581388-207581468 1.46e-01 80 chr1:7018646-7018726 2.07e-04 38_[+1(7.27e-05)]_4_[+3(3.26e-05)]_\ 22 chr5:32531844-32531924 1.27e-02 80 chr7:139865360-139865440 1.94e-03 37_[+2(7.20e-05)]_35 chr1:8278871-8278951 5.33e-02 28_[+2(7.20e-05)]_44 chr12:27702816-27702896 2.25e-01 80 chr12:113652885-11365296 3.14e-02 80 chr17:6830741-6830821 7.84e-02 80 chr2:70154411-70154491 2.53e-02 2_[+2(1.88e-05)]_70 chr12:89556739-89556819 8.68e-04 35_[+3(3.26e-05)]_37 chrX:30645981-30646061 1.43e-02 80 chr8:17383201-17383281 4.12e-02 80 chr3:36721073-36721153 3.92e-05 18_[+4(2.57e-05)]_13_[+5(7.51e-05)]_\ 3_[+2(4.51e-05)]_22 chr16:81876995-81877075 1.14e-03 80 chr7:123635929-123636009 1.55e-02 80 chr10:21976753-21976833 2.18e-01 80 chr17:25572069-25572149 2.76e-02 80 chr11:57202305-57202385 8.47e-03 80 chr6:36617771-36617851 2.86e-03 20_[+1(1.90e-05)]_52 chr8:124070590-124070670 3.37e-04 15_[+5(1.37e-05)]_57 chr11:7621598-7621678 5.32e-05 16_[+2(7.20e-05)]_6_[+1(1.90e-05)]_\ 42 chr15:51536958-51537038 5.20e-04 51_[+1(9.16e-05)]_2_[+1(1.90e-05)]_\ 11 chr12:90485135-90485215 3.55e-05 23_[+2(1.88e-05)]_49 chr1:116520413-116520493 1.01e-02 28_[+5(9.84e-05)]_44 chr5:142431270-142431350 1.43e-02 80 chr1:61524332-61524412 8.65e-04 2_[+5(7.51e-05)]_70 chr6:4382730-4382810 1.45e-04 27_[+1(1.90e-05)]_45 chr22:17956022-17956102 2.55e-03 57_[+2(4.51e-05)]_15 chr1:182429790-182429870 1.25e-03 80 chr12:50144312-50144392 2.62e-03 42_[+3(3.26e-05)]_2_[+2(7.20e-05)]_\ 20 chr8:52875601-52875681 6.94e-02 80 chr16:57709748-57709828 1.56e-03 80 chr11:59634038-59634118 5.67e-02 80 chr13:52678934-52679014 7.58e-02 80 chr12:48275805-48275885 2.36e-03 55_[+1(1.90e-05)]_17 chr3:15329201-15329281 2.65e-04 30_[+1(1.90e-05)]_42 chr4:74974929-74975009 2.53e-03 80 chr14:24163893-24163973 1.59e-05 7_[+4(2.57e-05)]_11_[+1(1.90e-05)]_\ 13_[+3(3.26e-05)]_25 chr22:29195330-29195410 1.84e-02 24_[+2(1.88e-05)]_48 chr15:55542779-55542859 5.56e-03 51_[+2(1.88e-05)]_21 chr4:188538424-188538504 1.31e-04 24_[+1(1.90e-05)]_48 chr2:123148154-123148234 6.17e-03 44_[+1(1.90e-05)]_28 chr1:176210746-176210826 8.49e-06 25_[+1(3.26e-05)]_2_[+2(4.51e-05)]_\ 15_[+3(3.26e-05)]_14 chr15:68828836-68828916 8.64e-03 22_[+1(1.90e-05)]_50 chr8:54758883-54758963 9.43e-03 43_[+2(7.20e-05)]_29 chr5:118282036-118282116 1.76e-02 80 chr6:117719175-117719255 1.24e-05 6_[+1(1.90e-05)]_45_[+2(1.88e-05)]_\ 13 chr21:40635513-40635593 1.38e-03 19_[+1(7.27e-05)]_20_[+1(1.90e-05)]_\ 25 chr3:58321054-58321134 1.20e-02 52_[+2(1.88e-05)]_20 chr11:93141128-93141208 5.71e-06 13_[+2(7.20e-05)]_14_[+1(1.90e-05)]_\ 37 chr6:6556925-6557005 8.81e-03 51_[+2(4.51e-05)]_21 chr6:53494893-53494973 3.29e-03 36_[+1(1.90e-05)]_36 chrX:151065776-151065856 6.30e-02 34_[+2(1.88e-05)]_38 chr15:80609943-80610023 6.05e-03 49_[+1(1.90e-05)]_23 chr6:88441650-88441730 1.39e-01 80 chrX:133738254-133738334 4.74e-04 23_[+1(1.90e-05)]_49 chr9:100639216-100639296 2.25e-02 19_[+2(1.88e-05)]_53 chr20:48619826-48619906 3.06e-03 50_[+2(1.88e-05)]_22 chr9:124860224-124860304 5.21e-03 52_[+1(3.26e-05)]_20 chr6:41145606-41145686 4.52e-04 47_[+2(1.88e-05)]_25 chr4:141172324-141172404 1.42e-03 22_[+1(7.27e-05)]_50 chr5:79695664-79695744 1.61e-04 26_[+3(3.26e-05)]_16_[+2(1.88e-05)]_\ 22 chr1:61586758-61586838 7.86e-05 53_[+1(1.90e-05)]_19 chr7:35566407-35566487 1.42e-03 15_[+1(3.26e-05)]_57 chr15:52089180-52089260 1.21e-03 44_[+2(4.51e-05)]_15_[+3(3.26e-05)]_\ 5 chr10:15745581-15745661 2.35e-05 24_[+1(1.90e-05)]_4_[+5(1.37e-05)]_\ 36 chr16:20922182-20922262 4.97e-02 80 chr2:85932848-85932928 3.34e-04 16_[+3(3.26e-05)]_23_[+1(1.90e-05)]_\ 25 chr10:119522361-11952244 1.17e-03 67_[+2(4.51e-05)]_5 chr4:96170349-96170429 2.95e-05 34_[+1(1.90e-05)]_26_[+5(1.37e-05)]_\ 4 chr6:136547238-136547318 1.63e-04 57_[+2(4.51e-05)]_15 chr21:40211652-40211732 3.52e-03 22_[+1(1.90e-05)]_50 chr18:2627940-2628020 5.68e-03 51_[+5(7.51e-05)]_21 chr6:36634972-36635052 1.44e-04 5_[+5(9.84e-05)]_29_[+1(1.90e-05)]_\ 30 chr1:243376493-243376573 1.09e-04 37_[+1(1.90e-05)]_18_[+2(4.51e-05)]_\ 9 chr3:36689182-36689262 2.94e-02 39_[+2(4.51e-05)]_33 chr2:145463386-145463466 1.13e-02 26_[+1(1.90e-05)]_46 chr6:110462155-110462235 2.25e-06 16_[+4(5.19e-05)]_14_[+2(4.51e-05)]_\ 15_[+3(3.26e-05)]_11 chr18:29291537-29291617 2.39e-03 24_[+2(1.88e-05)]_12_[+2(4.51e-05)]_\ 28 chr6:20573307-20573387 1.03e-02 57_[+5(7.51e-05)]_15 chr8:10862659-10862739 1.67e-05 40_[+4(4.23e-05)]_4_[+1(7.27e-05)]_\ 2_[+2(4.51e-05)]_10 chr16:25017134-25017214 1.94e-03 43_[+5(7.51e-05)]_29 chr9:37290942-37291022 8.87e-02 80 chr21:43619707-43619787 2.67e-04 46_[+2(1.88e-05)]_26 chr6:162520847-162520927 1.07e-03 80 chr11:102631282-10263136 1.40e-02 44_[+2(1.88e-05)]_28 chr5:36373665-36373745 3.37e-02 80 chr19:18920347-18920427 5.30e-04 80 chr17:57773514-57773594 3.78e-03 23_[+2(1.88e-05)]_49 chr15:66023332-66023412 3.24e-03 80 chr2:54760296-54760376 2.77e-06 48_[+2(4.51e-05)]_15_[+3(3.26e-05)]_\ 1 chr1:180023256-180023336 1.92e-04 49_[+1(1.90e-05)]_23 chr14:74252663-74252743 1.67e-03 80 chr10:22013698-22013778 1.56e-02 80 chr11:72673306-72673386 4.74e-03 23_[+1(1.90e-05)]_49 chr13:23735382-23735462 1.80e-01 80 chr6:36258505-36258585 1.53e-03 32_[+1(1.90e-05)]_40 chr15:58708015-58708095 5.99e-03 47_[+1(1.90e-05)]_25 chr6:3339289-3339369 6.42e-04 46_[+1(1.90e-05)]_26 chr12:48934023-48934103 9.78e-07 5_[+1(1.90e-05)]_35_[+4(4.94e-06)]_\ 4_[+2(1.88e-05)]_12 chr5:78614942-78615022 1.49e-03 24_[+2(1.88e-05)]_48 chr10:115785240-11578532 4.82e-03 22_[+1(1.90e-05)]_50 chr3:4548889-4548969 2.97e-01 80 chr8:20058443-20058523 3.81e-03 1_[+1(7.27e-05)]_71 chr5:55750242-55750322 9.43e-04 43_[+4(8.60e-05)]_29 chr2:69234976-69235056 5.89e-03 34_[+2(1.88e-05)]_38 chr3:197036623-197036703 2.30e-04 24_[+1(1.90e-05)]_48 chr19:45091780-45091860 3.95e-04 50_[+1(1.90e-05)]_22 chr22:17291246-17291326 1.76e-02 27_[+2(1.88e-05)]_45 chr14:103828308-10382838 8.20e-04 48_[+2(1.88e-05)]_24 chr8:123701962-123702042 7.66e-02 80 chr3:4946661-4946741 6.94e-02 80 chr2:208176433-208176513 8.40e-02 49_[+2(7.20e-05)]_23 chr2:62266650-62266730 2.02e-03 37_[+2(1.88e-05)]_35 chr5:5598866-5598946 1.08e-03 45_[+1(1.90e-05)]_27 chr21:36147205-36147285 4.39e-05 40_[+4(4.94e-06)]_32 chr3:127729217-127729297 4.91e-02 48_[+2(1.88e-05)]_24 chr6:149727241-149727321 1.31e-04 80 chr2:158333993-158334073 3.80e-04 31_[+2(1.88e-05)]_15_[+5(1.37e-05)]_\ 18 chr10:93389592-93389672 3.11e-01 80 chr2:33090788-33090868 2.51e-01 80 chr6:16335052-16335132 3.91e-02 80 chr18:1438613-1438693 6.25e-03 39_[+2(1.88e-05)]_33 chr12:50226748-50226828 9.59e-03 51_[+2(1.88e-05)]_21 chr5:53290100-53290180 5.82e-05 22_[+1(1.90e-05)]_18_[+2(4.51e-05)]_\ 24 chr8:10556197-10556277 1.23e-02 26_[+2(1.88e-05)]_46 chr2:72161858-72161938 1.56e-02 48_[+1(1.90e-05)]_24 chr15:75009120-75009200 9.49e-04 53_[+1(1.90e-05)]_19 chr10:90846674-90846754 6.08e-03 24_[+1(1.90e-05)]_48 chr13:48519992-48520072 5.06e-01 80 chr15:58525742-58525822 2.71e-03 16_[+1(1.90e-05)]_56 chr6:157890454-157890534 1.18e-02 80 chr10:11581484-11581564 1.30e-01 80 chr15:66662618-66662698 6.62e-03 43_[+2(1.88e-05)]_29 chr3:185821900-185821980 2.95e-05 8_[+1(1.90e-05)]_22_[+4(3.26e-05)]_\ 34 chr4:141349351-141349431 2.93e-04 50_[+5(7.51e-05)]_22 chr6:159505696-159505776 2.65e-02 14_[+2(1.88e-05)]_58 chr6:144629167-144629247 4.69e-04 36_[+2(1.88e-05)]_36 chr3:146224527-146224607 8.68e-04 8_[+5(7.51e-05)]_31_[+4(4.23e-05)]_\ 25 chr19:47397357-47397437 1.89e-03 38_[+1(1.90e-05)]_34 chr1:84305442-84305522 1.47e-03 49_[+2(1.88e-05)]_23 chr19:15411635-15411715 1.87e-02 19_[+1(1.90e-05)]_53 chr2:178052491-178052571 4.88e-03 39_[+2(1.88e-05)]_33 chr1:37906403-37906483 5.38e-03 51_[+1(1.90e-05)]_21 chr4:153400775-153400855 1.09e-02 80 chr1:205876598-205876678 6.39e-07 [+4(5.19e-05)]_16_[+1(3.26e-05)]_2_\ [+2(4.51e-05)]_15_[+3(3.26e-05)]_15 chr7:129338947-129339027 5.82e-03 24_[+1(1.90e-05)]_48 chr12:90127602-90127682 1.39e-02 80 chr8:16423327-16423407 1.22e-04 1_[+5(1.37e-05)]_20_[+1(1.90e-05)]_\ 43 chr10:71029672-71029752 2.29e-03 38_[+2(1.88e-05)]_34 chr16:24269500-24269580 4.57e-03 45_[+2(1.88e-05)]_27 chr10:71029888-71029968 4.95e-03 48_[+4(1.88e-05)]_24 chr9:117080253-117080333 3.26e-04 21_[+1(1.90e-05)]_51 chr2:223846893-223846973 2.23e-03 56_[+1(1.90e-05)]_16 chr11:34676564-34676644 8.64e-03 44_[+1(9.16e-05)]_28 chr6:125335648-125335728 1.20e-02 49_[+2(1.88e-05)]_23 chr5:78531249-78531329 6.20e-02 80 chr20:49838655-49838735 1.27e-03 80 chr11:88111761-88111841 1.26e-03 51_[+1(1.90e-05)]_21 chr4:73555799-73555879 1.07e-02 48_[+2(1.88e-05)]_24 chr2:135814523-135814603 1.64e-02 41_[+2(1.88e-05)]_31 chr12:93638073-93638153 5.00e-03 80 chr11:67297063-67297143 1.14e-02 80 chr2:32398108-32398188 2.47e-02 34_[+2(1.88e-05)]_38 chr7:140541309-140541389 4.80e-02 80 chr3:37177792-37177872 9.40e-04 42_[+1(7.27e-05)]_30 chr22:21428753-21428833 4.89e-03 48_[+1(1.90e-05)]_24 chr14:57075544-57075624 5.91e-05 6_[+1(1.90e-05)]_66 chr16:126343-126423 7.21e-03 80 chr4:123795538-123795618 3.02e-05 34_[+1(1.90e-05)]_23_[+5(8.88e-05)]_\ 7 chrX:119490086-119490166 3.93e-03 56_[+2(1.88e-05)]_16 chr5:95197218-95197298 1.20e-02 80 chr5:142541577-142541657 1.92e-02 80 chr17:2185870-2185950 2.93e-04 18_[+4(1.88e-05)]_21_[+2(1.88e-05)]_\ 25 chr4:83047089-83047169 8.05e-04 30_[+1(1.90e-05)]_42 chr3:24720157-24720237 1.06e-03 57_[+1(9.16e-05)]_15 chr21:30590238-30590318 2.73e-04 24_[+5(7.51e-05)]_48 chr1:209847377-209847457 1.57e-04 31_[+1(9.16e-05)]_2_[+2(1.88e-05)]_\ 31 chr1:25417615-25417695 2.21e-02 36_[+2(1.88e-05)]_36 chr15:43834124-43834204 1.60e-02 26_[+2(1.88e-05)]_46 chr17:32674262-32674342 1.61e-02 28_[+1(1.90e-05)]_44 chr14:95990186-95990266 7.02e-02 80 chr21:15734459-15734539 4.79e-05 34_[+2(1.88e-05)]_38 chr1:38328194-38328274 4.21e-04 13_[+2(4.51e-05)]_59 chr3:46649206-46649286 1.42e-04 7_[+4(1.18e-05)]_[+1(7.27e-05)]_57 chr1:109705073-109705153 7.17e-04 4_[+4(3.26e-05)]_68 chr5:138038313-138038393 2.01e-03 27_[+1(1.90e-05)]_45 chr3:136676701-136676781 1.68e-03 47_[+1(1.90e-05)]_25 chr12:57623918-57623998 1.66e-04 34_[+1(1.90e-05)]_14_[+2(1.88e-05)]_\ 16 chr19:11435087-11435167 5.22e-02 80 chr20:18565909-18565989 2.08e-02 24_[+2(4.51e-05)]_48 chr3:195782790-195782870 5.40e-05 22_[+4(1.88e-05)]_10_[+1(1.90e-05)]_\ 32 chr1:92981629-92981709 4.54e-04 27_[+1(1.90e-05)]_45 chr20:30624727-30624807 6.68e-03 27_[+1(1.90e-05)]_45 chr1:26021678-26021758 7.27e-03 49_[+1(9.16e-05)]_23 chr7:75575171-75575251 3.87e-02 64_[+1(9.16e-05)]_8 chr15:45643573-45643653 5.04e-05 14_[+1(3.26e-05)]_35_[+2(1.88e-05)]_\ 15 chr17:53750214-53750294 4.32e-03 26_[+2(1.88e-05)]_46 chr5:32391195-32391275 1.46e-02 80 chr11:12972363-12972443 2.54e-03 51_[+2(1.88e-05)]_21 chr10:62186302-62186382 2.87e-03 80 chr17:14112715-14112795 8.87e-04 19_[+4(4.23e-05)]_13_[+2(1.88e-05)]_\ 32 chr2:183897073-183897153 1.98e-03 48_[+2(4.51e-05)]_24 chr7:134047796-134047876 1.10e-05 45_[+2(1.88e-05)]_9_[+1(7.27e-05)]_\ 10 chr10:64873933-64874013 8.82e-03 22_[+2(1.88e-05)]_50 chr15:67973045-67973125 3.43e-03 43_[+2(1.88e-05)]_29 chr2:47747433-47747513 9.06e-03 80 chr2:55327166-55327246 3.36e-04 40_[+1(1.90e-05)]_32 chr14:71315758-71315838 4.82e-03 19_[+1(1.90e-05)]_53 chr1:26813998-26814078 4.02e-03 55_[+2(7.20e-05)]_17 chr5:118658879-118658959 2.55e-03 46_[+2(1.88e-05)]_26 chr1:222628916-222628996 3.93e-03 20_[+1(1.90e-05)]_52 chr8:124629045-124629125 1.19e-02 44_[+2(4.51e-05)]_28 chr7:144559790-144559870 3.07e-02 47_[+2(1.88e-05)]_25 chr13:52098654-52098734 2.82e-04 44_[+1(3.26e-05)]_2_[+2(4.51e-05)]_\ 18 chr9:94181683-94181763 4.28e-04 59_[+2(1.88e-05)]_13 chr1:153763674-153763754 1.80e-01 80 chr5:145061367-145061447 8.83e-03 45_[+2(1.88e-05)]_27 chr4:89724868-89724948 1.93e-02 38_[+1(7.27e-05)]_34 chr18:54801927-54802007 1.60e-01 24_[+2(7.20e-05)]_48 chr1:8272192-8272272 1.22e-02 46_[+2(1.88e-05)]_26 chr4:14969749-14969829 1.55e-04 50_[+1(7.27e-05)]_3_[+2(1.88e-05)]_\ 11 chr6:43677176-43677256 1.46e-02 80 chr20:33268529-33268609 1.45e-02 20_[+2(1.88e-05)]_52 chr10:23801466-23801546 3.98e-05 31_[+2(7.20e-05)]_23_[+5(3.69e-05)]_\ 10 chr6:7698528-7698608 3.64e-02 80 chr1:32961816-32961896 9.73e-03 39_[+1(1.90e-05)]_33 chr6:24223468-24223548 5.67e-03 57_[+3(6.49e-05)]_15 chr10:80201620-80201700 4.86e-03 42_[+1(1.90e-05)]_30 chr18:20065874-20065954 8.64e-03 22_[+1(1.90e-05)]_50 chr3:5168470-5168550 2.73e-02 80 chr1:33515917-33515997 1.70e-03 36_[+2(4.51e-05)]_15_[+3(3.26e-05)]_\ 13 chr6:45413435-45413515 9.43e-01 80 chr1:52521394-52521474 3.10e-03 36_[+1(1.90e-05)]_5_[+1(1.90e-05)]_\ 23 chr2:106072261-106072341 4.47e-03 36_[+2(1.88e-05)]_36 chr1:193080879-193080959 5.40e-05 8_[+4(1.88e-05)]_10_[+1(1.90e-05)]_\ 46 chr6:35674382-35674462 3.64e-01 80 chr2:88399826-88399906 1.45e-02 80 chr2:217126008-217126088 1.20e-04 50_[+2(1.88e-05)]_22 chr1:54247525-54247605 2.86e-03 53_[+1(1.90e-05)]_19 chr3:177989614-177989694 3.66e-02 43_[+2(1.88e-05)]_29 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n04.farnam.hpc.yale.internal ********************************************************************************