******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/BCOR.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr11:68151514-68151594 1.0000 80 chr19:11373351-11373431 1.0000 80 chr8:145056782-145056862 1.0000 80 chr19:56859826-56859906 1.0000 80 chr1:26186764-26186844 1.0000 80 chr19:842191-842271 1.0000 80 chr19:15559375-15559455 1.0000 80 chr1:32411397-32411477 1.0000 80 chr19:56112585-56112665 1.0000 80 chr1:47557238-47557318 1.0000 80 chr9:131523117-131523197 1.0000 80 chr15:41193379-41193459 1.0000 80 chr1:47341944-47342024 1.0000 80 chr1:156632092-156632172 1.0000 80 chr9:135868314-135868394 1.0000 80 chr15:85731618-85731698 1.0000 80 chr9:126058602-126058682 1.0000 80 chr1:235119422-235119502 1.0000 80 chr1:228267412-228267492 1.0000 80 chr9:136029942-136030022 1.0000 80 chr7:116500190-116500270 1.0000 80 chrX:47441294-47441374 1.0000 80 chr9:130925534-130925614 1.0000 80 chr8:37757580-37757660 1.0000 80 chr19:796364-796444 1.0000 80 chr12:7795655-7795735 1.0000 80 chr3:5094103-5094183 1.0000 80 chr3:138951375-138951455 1.0000 80 chr19:8315637-8315717 1.0000 80 chr19:5480580-5480660 1.0000 80 chr1:15775534-15775614 1.0000 80 chr1:154126683-154126763 1.0000 80 chr19:17500960-17501040 1.0000 80 chr6:37014269-37014349 1.0000 80 chr12:125358886-12535896 1.0000 80 chr1:229485297-229485377 1.0000 80 chr1:17042628-17042708 1.0000 80 chr17:30412640-30412720 1.0000 80 chr2:24703274-24703354 1.0000 80 chr1:40365991-40366071 1.0000 80 chr19:1398027-1398107 1.0000 80 chr17:29877883-29877963 1.0000 80 chr9:130976547-130976627 1.0000 80 chr14:75765058-75765138 1.0000 80 chr16:28993962-28994042 1.0000 80 chr19:1682340-1682420 1.0000 80 chr7:73996916-73996996 1.0000 80 chr22:17036568-17036648 1.0000 80 chr10:73397204-73397284 1.0000 80 chr11:76449799-76449879 1.0000 80 chr1:31231101-31231181 1.0000 80 chr7:75994994-75995074 1.0000 80 chr17:79474928-79475008 1.0000 80 chr17:48765850-48765930 1.0000 80 chr5:148809501-148809581 1.0000 80 chr12:122029181-12202926 1.0000 80 chr17:80317417-80317497 1.0000 80 chr9:131126871-131126951 1.0000 80 chr16:1381441-1381521 1.0000 80 chr11:75011377-75011457 1.0000 80 chr7:25933752-25933832 1.0000 80 chr10:74026378-74026458 1.0000 80 chr11:85877490-85877570 1.0000 80 chr16:67195162-67195242 1.0000 80 chr6:31739252-31739332 1.0000 80 chr11:3465744-3465824 1.0000 80 chr6:16225716-16225796 1.0000 80 chr3:72328037-72328117 1.0000 80 chr16:21565033-21565113 1.0000 80 chr3:14876478-14876558 1.0000 80 chr16:84647151-84647231 1.0000 80 chr19:4344125-4344205 1.0000 80 chr11:61101302-61101382 1.0000 80 chr1:12611760-12611840 1.0000 80 chr1:16474212-16474292 1.0000 80 chr5:125874410-125874490 1.0000 80 chr1:954589-954669 1.0000 80 chr1:26371084-26371164 1.0000 80 chr19:17358122-17358202 1.0000 80 chr19:6460014-6460094 1.0000 80 chr1:20943748-20943828 1.0000 80 chr10:74071525-74071605 1.0000 80 chr7:116652443-116652523 1.0000 80 chr1:11801709-11801789 1.0000 80 chr7:32539518-32539598 1.0000 80 chr1:39280974-39281054 1.0000 80 chr19:38738746-38738826 1.0000 80 chr17:73509554-73509634 1.0000 80 chr19:5170476-5170556 1.0000 80 chr16:85359898-85359978 1.0000 80 chr10:52078069-52078149 1.0000 80 chr19:50368262-50368342 1.0000 80 chr16:85599586-85599666 1.0000 80 chr14:78389653-78389733 1.0000 80 chr17:46322969-46323049 1.0000 80 chr18:48368496-48368576 1.0000 80 chr7:30189642-30189722 1.0000 80 chr19:8213269-8213349 1.0000 80 chr19:4056031-4056111 1.0000 80 chr20:45317287-45317367 1.0000 80 chr12:54891139-54891219 1.0000 80 chr17:46605739-46605819 1.0000 80 chr19:3052235-3052315 1.0000 80 chr4:3551937-3552017 1.0000 80 chr12:54753719-54753799 1.0000 80 chr19:3398121-3398201 1.0000 80 chr12:117038898-11703897 1.0000 80 chr11:33957780-33957860 1.0000 80 chr19:38928095-38928175 1.0000 80 chr19:17726828-17726908 1.0000 80 chr1:16509264-16509344 1.0000 80 chr6:158403776-158403856 1.0000 80 chr7:148683577-148683657 1.0000 80 chr16:14380399-14380479 1.0000 80 chr7:76048290-76048370 1.0000 80 chr9:115079480-115079560 1.0000 80 chr19:4599465-4599545 1.0000 80 chr19:14144883-14144963 1.0000 80 chr19:45799287-45799367 1.0000 80 chr16:4396636-4396716 1.0000 80 chr21:33893218-33893298 1.0000 80 chr19:13510730-13510810 1.0000 80 chr7:73923949-73924029 1.0000 80 chr22:21100032-21100112 1.0000 80 chr10:72425731-72425811 1.0000 80 chr9:135820765-135820845 1.0000 80 chr19:48845165-48845245 1.0000 80 chr11:75255072-75255152 1.0000 80 chr19:3720084-3720164 1.0000 80 chr20:35489717-35489797 1.0000 80 chr6:31621666-31621746 1.0000 80 chr20:32503542-32503622 1.0000 80 chr6:3397689-3397769 1.0000 80 chr9:126079641-126079721 1.0000 80 chr9:132178053-132178133 1.0000 80 chr2:10611251-10611331 1.0000 80 chr19:45506906-45506986 1.0000 80 chr10:80807478-80807558 1.0000 80 chr18:47808372-47808452 1.0000 80 chr1:211784256-211784336 1.0000 80 chr15:90605027-90605107 1.0000 80 chr22:20007656-20007736 1.0000 80 chr1:21962704-21962784 1.0000 80 chr1:224031727-224031807 1.0000 80 chr11:64528408-64528488 1.0000 80 chr6:16056823-16056903 1.0000 80 chr7:73029436-73029516 1.0000 80 chr20:52353683-52353763 1.0000 80 chr1:12118549-12118629 1.0000 80 chr16:29041131-29041211 1.0000 80 chr16:4375346-4375426 1.0000 80 chr3:5101177-5101257 1.0000 80 chr1:12599798-12599878 1.0000 80 chr1:26865119-26865199 1.0000 80 chr11:65254224-65254304 1.0000 80 chr19:35797407-35797487 1.0000 80 chr19:4578695-4578775 1.0000 80 chr1:31359711-31359791 1.0000 80 chr4:81049335-81049415 1.0000 80 chr19:13030521-13030601 1.0000 80 chr19:3471981-3472061 1.0000 80 chr12:122370198-12237027 1.0000 80 chr19:55679109-55679189 1.0000 80 chr5:134493519-134493599 1.0000 80 chr6:159072104-159072184 1.0000 80 chr22:26880257-26880337 1.0000 80 chr5:145214252-145214332 1.0000 80 chr11:2951253-2951333 1.0000 80 chr5:176790721-176790801 1.0000 80 chr22:22405676-22405756 1.0000 80 chr11:117973054-11797313 1.0000 80 chr9:132334073-132334153 1.0000 80 chr12:114077432-11407751 1.0000 80 chr1:17536156-17536236 1.0000 80 chr15:68520984-68521064 1.0000 80 chr19:18113281-18113361 1.0000 80 chr1:26404157-26404237 1.0000 80 chr5:172192932-172193012 1.0000 80 chr1:53095535-53095615 1.0000 80 chr20:48688196-48688276 1.0000 80 chr6:43902523-43902603 1.0000 80 chr16:16684936-16685016 1.0000 80 chr22:46664277-46664357 1.0000 80 chr12:31000326-31000406 1.0000 80 chr19:8306706-8306786 1.0000 80 chr1:22228977-22229057 1.0000 80 chr10:21455561-21455641 1.0000 80 chr1:22234354-22234434 1.0000 80 chr12:123867387-12386746 1.0000 80 chr7:2670861-2670941 1.0000 80 chr22:39695921-39696001 1.0000 80 chr1:180472788-180472868 1.0000 80 chr15:55611916-55611996 1.0000 80 chr19:1247841-1247921 1.0000 80 chr5:131809045-131809125 1.0000 80 chr7:2353246-2353326 1.0000 80 chr10:45933757-45933837 1.0000 80 chr20:56024174-56024254 1.0000 80 chr1:153520631-153520711 1.0000 80 chr1:31228356-31228436 1.0000 80 chr12:54610223-54610303 1.0000 80 chr6:37605486-37605566 1.0000 80 chr19:10526472-10526552 1.0000 80 chr19:3321010-3321090 1.0000 80 chr5:173204781-173204861 1.0000 80 chr19:1310113-1310193 1.0000 80 chr19:14083288-14083368 1.0000 80 chr10:49697300-49697380 1.0000 80 chr15:78024434-78024514 1.0000 80 chr1:12209137-12209217 1.0000 80 chr12:113862874-11386295 1.0000 80 chr1:24235100-24235180 1.0000 80 chr19:40921868-40921948 1.0000 80 chr1:16421440-16421520 1.0000 80 chr19:47847857-47847937 1.0000 80 chr1:21969395-21969475 1.0000 80 chr19:45822516-45822596 1.0000 80 chr12:116822120-11682220 1.0000 80 chr6:6862397-6862477 1.0000 80 chr1:16471300-16471380 1.0000 80 chr17:72927793-72927873 1.0000 80 chr11:75189853-75189933 1.0000 80 chr16:70472273-70472353 1.0000 80 chr19:40909315-40909395 1.0000 80 chr19:3362660-3362740 1.0000 80 chr11:74808400-74808480 1.0000 80 chr22:37669758-37669838 1.0000 80 chr1:39676500-39676580 1.0000 80 chr1:15750029-15750109 1.0000 80 chr16:4992245-4992325 1.0000 80 chr10:99167597-99167677 1.0000 80 chr19:17716074-17716154 1.0000 80 chr16:16081149-16081229 1.0000 80 chr1:171614018-171614098 1.0000 80 chr1:155036910-155036990 1.0000 80 chr6:37016135-37016215 1.0000 80 chr19:703454-703534 1.0000 80 chr17:17655995-17656075 1.0000 80 chr6:138131776-138131856 1.0000 80 chr1:31376683-31376763 1.0000 80 chr19:46088478-46088558 1.0000 80 chr17:21199896-21199976 1.0000 80 chr1:17249423-17249503 1.0000 80 chr19:10728281-10728361 1.0000 80 chr19:18215669-18215749 1.0000 80 chr17:75117763-75117843 1.0000 80 chr16:11297332-11297412 1.0000 80 chr1:11840621-11840701 1.0000 80 chr9:137216318-137216398 1.0000 80 chr19:10534164-10534244 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_BCOR/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/BCOR.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.261 C 0.247 G 0.23 T 0.263 Background letter frequencies (from file dataset with add-one prior applied): A 0.26 C 0.247 G 0.23 T 0.263 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CYCAKTTT MEME-1 width = 8 sites = 130 llr = 1041 E-value = 5.6e-114 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :::a:::: pos.-specific C a4a::::1 probability G ::::5:1: matrix T :5::5a98 bits 2.1 * 1.9 * * 1.7 * ** * 1.5 * ** ** Relative 1.3 * ** ** Entropy 1.1 * ** *** (11.5 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTCAGTTT consensus C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:17716074-17716154 21 3.38e-05 ctctttaagc ctcagttt tgccatctgt chr10:99167597-99167677 57 3.38e-05 ttccctgagc ctcagttt tccacatctg chr16:4992245-4992325 31 3.38e-05 ctctctgagc ctcagttt tcctcatctg chr22:37669758-37669838 28 3.38e-05 ctccctgaac ctcagttt cctggtctgt chr19:3362660-3362740 48 3.38e-05 ttcttacagc ctcagttt ctcatctgta chr16:70472273-70472353 32 3.38e-05 TCAGCCGTGC CTCAGTTT CCCCAAAGTA chr1:16471300-16471380 35 3.38e-05 ctctccggac ctcagttt cctcatctgt chr1:16421440-16421520 10 3.38e-05 tgaccgagc ctcagttt atccatctgg chr6:37605486-37605566 2 3.38e-05 c ctcagttt cctcatctgt chr10:45933757-45933837 45 3.38e-05 cagctggagc ctcagttt ccccccatgt chr19:1247841-1247921 6 3.38e-05 GTGgc ctcagttt cttcatctgt chr16:16684936-16685016 67 3.38e-05 tcctctgaga ctcagttt tcttgc chr1:53095535-53095615 26 3.38e-05 ctctctgggt ctcagttt tcctacccat chr5:172192932-172193012 58 3.38e-05 acaaGtgagc ctcagttt tgtcctctgt chr22:26880257-26880337 46 3.38e-05 atctctgtgc ctcagttt tctcatctgt chr4:81049335-81049415 48 3.38e-05 gtttcagtac ctcagttt tcctatcttt chr6:16056823-16056903 46 3.38e-05 atctctgtgc ctcagttt gctcatctat chr19:45506906-45506986 24 3.38e-05 cagttcaggc ctcagttt tcctcatctg chr6:3397689-3397769 40 3.38e-05 AATTAGAGgt ctcagttt ccttaactgt chr9:135820765-135820845 39 3.38e-05 tcctccaagc ctcagttt cttcctctgt chr10:72425731-72425811 38 3.38e-05 ctctctgggt ctcagttt gcccctctgt chr21:33893218-33893298 32 3.38e-05 ttatctgtgc ctcagttt cctcatctgt chr19:4599465-4599545 35 3.38e-05 ttctctgagc ctcagttt actcatctgt chr12:117038898-11703897 38 3.38e-05 tgatcggcac ctcagttt tcccacctgt chr19:3398121-3398201 55 3.38e-05 tgctccgtgc ctcagttt ccccaaatgc chr4:3551937-3552017 16 3.38e-05 ctctctgtgc ctcagttt gctcatctgc chr10:52078069-52078149 29 3.38e-05 ccatcctagc ctcagttt tctcacctgt chr1:39280974-39281054 33 3.38e-05 ctctctgacc ctcagttt cttccactgt chr1:11801709-11801789 37 3.38e-05 ccttctgagc ctcagttt tctcagctgt chr1:20943748-20943828 37 3.38e-05 tctgctaagc ctcagttt cctcatcagt chr19:6460014-6460094 2 3.38e-05 C CTCAGTTT ACCCTTTCCC chr5:125874410-125874490 66 3.38e-05 ctctctgtgc ctcagttt ccaaatc chr3:72328037-72328117 37 3.38e-05 gttctggtgc ctcagttt tctcatccat chr11:3465744-3465824 44 3.38e-05 tgctctgtgc ctcagttt tgtcatccgt chr17:80317417-80317497 44 3.38e-05 ctcaggttcc ctcagttt ccctcaagtt chr12:122029181-12202926 27 3.38e-05 aaacttaagt ctcagttt tctcatctgt chr16:28993962-28994042 60 3.38e-05 cctctctgtg ctcagttt catcatgtgt chr1:40365991-40366071 31 3.38e-05 Atctctaagc ctcagttt ttccatctgt chr3:5094103-5094183 38 3.38e-05 caagttaggc ctcagttt ttctcatctg chr19:796364-796444 72 3.38e-05 AGGTCCAGGC CTCAGTTT C chrX:47441294-47441374 1 3.38e-05 . ctcagttt ccccattttg chr9:131523117-131523197 7 3.38e-05 ccagac ctcagttt cctcatctga chr19:56112585-56112665 51 3.38e-05 tttcctgtgc ctcagttt ccccatctgc chr19:15559375-15559455 45 3.38e-05 CCTGCACTGC CTCAGTTT ACCCATATTG chr11:68151514-68151594 22 3.38e-05 GCCTGCCTGC CTCAGTTT CCCCAGCCCT chr17:75117763-75117843 20 7.26e-05 aggcattatt cccatttt acagatgagg chr1:17249423-17249503 6 7.26e-05 aagaa cccatttt acagatgagg chr6:138131776-138131856 21 7.26e-05 gtattttgca cccatttt gcagatgagg chr16:16081149-16081229 10 7.26e-05 gttagtatt cccatttt acagatgcgg chr12:116822120-11682220 16 7.26e-05 tgtcaatgat cccatttt acagatagga chr12:113862874-11386295 22 7.26e-05 tgtttttatc cccatttt agagaagggg chr1:12209137-12209217 28 7.26e-05 gaacaagcct cccatttt acagatggga chr1:153520631-153520711 3 7.26e-05 at cccatttt acagatgagg chr5:131809045-131809125 29 7.26e-05 tgatgttata cccatttt acagatgaag chr19:8306706-8306786 29 7.26e-05 tctagctgta cccatttt tcagatggga chr22:46664277-46664357 20 7.26e-05 GGAGCCTGAG cccatttt acagatgagg chr6:43902523-43902603 33 7.26e-05 CGGtattatc cccatttt acagatttgg chr1:26404157-26404237 3 7.26e-05 tc cccatttt acagatgaga chr5:145214252-145214332 5 7.26e-05 tttc cccatttt acagattagc chr1:26865119-26865199 18 7.26e-05 tgttactgtc cccatttt acagatgaga chr1:224031727-224031807 18 7.26e-05 tactattatc cccatttt acagatgatg chr15:90605027-90605107 22 7.26e-05 ggctcttgtg cccatttt acagatcagg chr19:48845165-48845245 44 7.26e-05 cgctatcatc cccatttt ccagatgaga chr6:158403776-158403856 31 7.26e-05 tattattatc cccatttt gcagatgagc chr19:17726828-17726908 5 7.26e-05 tgtc cccatttt acagatgaga chr19:38738746-38738826 37 7.26e-05 ctgcaaagtA cccatttt ccagatgagg chr11:61101302-61101382 33 7.26e-05 GGAGCCAacc cccatttt acagatgagg chr3:14876478-14876558 9 7.26e-05 tcatcagc cccatttt acaggcagga chr6:31739252-31739332 21 7.26e-05 atAACTGata cccatttt acagatgatg chr16:1381441-1381521 4 7.26e-05 gtc cccatttt acagaagagg chr5:148809501-148809581 19 7.26e-05 gtgttatagc cccatttt acagatgaga chr1:31231101-31231181 66 7.26e-05 tattatgatc cccatttt acagatg chr11:76449799-76449879 16 7.26e-05 caaccctctc cccatttt gcaggtgaga chr10:73397204-73397284 44 7.26e-05 ctgcattctt cccatttt acagatgagg chr9:130976547-130976627 30 7.26e-05 CTCACAGCAA cccatttt actgatgtgg chr1:229485297-229485377 16 7.26e-05 ctattatgtg cccatttt acagatgatg chr1:15775534-15775614 7 7.26e-05 atcatg cccatttt acagatgaga chr9:130925534-130925614 36 7.26e-05 TGGtattcca cccatttt ccagacggtg chr7:116500190-116500270 51 7.26e-05 ATCATTTagc ctcatttt tttcttctgt chr9:136029942-136030022 14 7.26e-05 cataagcatg cccatttt acaggcagga chr9:135868314-135868394 26 7.26e-05 atgccattct cccatttt acagatgggg chr1:12118549-12118629 64 1.04e-04 tactctgagc ctcagttc atttataaa chr17:46605739-46605819 33 1.04e-04 GATCTTAAAG CTCAGTTC ATTCCAGCCC chr7:30189642-30189722 69 1.04e-04 ctctctgttt ctcagttc attt chr7:116652443-116652523 39 1.04e-04 tcctccatgc ctcagttc ttcatctcta chr19:40909315-40909395 39 1.41e-04 tagaataagt cccatttc agagatgaga chr15:78024434-78024514 24 1.41e-04 aactgctgtg cccatttc acagatgagg chr20:56024174-56024254 27 1.41e-04 ctgttataat cccatttc acaggcaagg chr1:31359711-31359791 1 1.41e-04 . cccatttc acagatgggc chr19:8213269-8213349 18 1.41e-04 cgcttctgtg cccatttc acagatgcac chr19:50368262-50368342 13 1.41e-04 tatcattagg cccatttc tcagaaaagt chr11:75011377-75011457 22 1.41e-04 ttactatcat cccatttc acagatgaga chr9:131126871-131126951 16 1.41e-04 catttttatc cccatttc acagatgagg chr5:134493519-134493599 31 1.70e-04 CTCTCAGGGT CTCAGTGT TACCACCTGC chr22:20007656-20007736 28 1.70e-04 tgctccaagt ctcagtgt ttacatctat chr19:38928095-38928175 34 1.70e-04 ctctctgagc ctcagtgt tctcatctgg chr14:75765058-75765138 33 1.70e-04 ttctcggaac ctcagtgt tcttatctgt chr3:138951375-138951455 4 1.88e-04 gac cacagttt cttttgtgtg chr12:114077432-11407751 27 2.51e-04 AGAAATCAGA cccattgt acagatgggg chr11:117973054-11797313 20 2.51e-04 atatcatcat cccattgt acagatgagg chr19:13510730-13510810 61 2.51e-04 ctttctgagc ctcagttg tctcatctgt chr7:73996916-73996996 18 2.51e-04 GGCCCAGAGT cccagttg aggaatgtgg chr22:22405676-22405756 60 2.71e-04 gcatatatgc cacatttt cttaatccag chr6:31621666-31621746 61 2.71e-04 tgtgcctaac cACATTTT AGCTTTTTAT chr7:32539518-32539598 65 2.71e-04 gtgtatgtac cacatttt ctttatcc chr9:137216318-137216398 35 3.41e-04 agtggttgtt cccacttt acagatgaga chr11:75189853-75189933 35 3.41e-04 gtgtcctaaa cccatttg acagttcaac chr10:49697300-49697380 30 3.41e-04 cattgatgac cccatttg acaggtggaa chr5:173204781-173204861 8 3.41e-04 tattact cccacttt acagatcaga chr10:21455561-21455641 36 3.41e-04 tattactgtg cccatttg acagatggag chr1:154126683-154126763 34 3.41e-04 Gtctctgggc ctcacttt cctcgtctgt chr15:55611916-55611996 28 4.49e-04 atttctgggc ctcaattt gctcgtctgt chr10:74071525-74071605 8 4.49e-04 tttgagg ctcaattt ccccatctgt chr1:11840621-11840701 21 5.47e-04 ctccctgagt ctcagctt acacatctgt chr1:39676500-39676580 18 5.47e-04 ttatctgggc ctctgttt tcctcatctg chr19:55679109-55679189 42 5.47e-04 ctttctgagc ctcagtct gctgctctgt chr9:132178053-132178133 25 5.47e-04 tgctttgagc ctcagtct tcccatctgg chr16:85599586-85599666 41 5.47e-04 ctctctggat ctctgttt tctcatctgc chr7:75994994-75995074 29 5.47e-04 atccaccgcg cccagcTT CACCCCTGTT chr19:8315637-8315717 7 5.47e-04 ctacta ctctgttt tacagatgaa chr1:155036910-155036990 66 6.26e-04 ccttcctaac ctcattta tctcacc chr11:74808400-74808480 32 6.26e-04 tcactgggtc ttcatttt gtcatctgtg chr12:122370198-12237027 8 6.26e-04 tcatata tccatttt acagaagaag chr20:35489717-35489797 23 6.26e-04 AAGACatcct cccattta acggatgagg chr19:45799287-45799367 2 6.26e-04 c tccatttt acagctgagg chr7:25933752-25933832 17 6.26e-04 acaagatagc cccattta ccagctgagc chr19:1398027-1398107 62 6.26e-04 GACTTTGATT TCCAtttt ttttgttttt chr17:29877883-29877963 27 7.38e-04 cttcacctcc ctcattct ataccccata chr19:1682340-1682420 25 7.66e-04 tccatggctc cccagtgc cctgaggaga chr15:68520984-68521064 22 1.10e-03 tcctctgaga ctcagctc aagtgccact -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:17716074-17716154 3.4e-05 20_[+1]_52 chr10:99167597-99167677 3.4e-05 56_[+1]_16 chr16:4992245-4992325 3.4e-05 30_[+1]_42 chr22:37669758-37669838 3.4e-05 27_[+1]_45 chr19:3362660-3362740 3.4e-05 47_[+1]_25 chr16:70472273-70472353 3.4e-05 31_[+1]_41 chr1:16471300-16471380 3.4e-05 34_[+1]_38 chr1:16421440-16421520 3.4e-05 9_[+1]_63 chr6:37605486-37605566 3.4e-05 1_[+1]_71 chr10:45933757-45933837 3.4e-05 44_[+1]_28 chr19:1247841-1247921 3.4e-05 5_[+1]_67 chr16:16684936-16685016 3.4e-05 66_[+1]_6 chr1:53095535-53095615 3.4e-05 25_[+1]_47 chr5:172192932-172193012 3.4e-05 57_[+1]_15 chr22:26880257-26880337 3.4e-05 45_[+1]_27 chr4:81049335-81049415 3.4e-05 47_[+1]_25 chr6:16056823-16056903 3.4e-05 45_[+1]_27 chr19:45506906-45506986 3.4e-05 23_[+1]_49 chr6:3397689-3397769 3.4e-05 39_[+1]_33 chr9:135820765-135820845 3.4e-05 38_[+1]_34 chr10:72425731-72425811 3.4e-05 37_[+1]_35 chr21:33893218-33893298 3.4e-05 31_[+1]_41 chr19:4599465-4599545 3.4e-05 34_[+1]_38 chr12:117038898-11703897 3.4e-05 37_[+1]_35 chr19:3398121-3398201 3.4e-05 54_[+1]_18 chr4:3551937-3552017 3.4e-05 15_[+1]_57 chr10:52078069-52078149 3.4e-05 28_[+1]_44 chr1:39280974-39281054 3.4e-05 32_[+1]_40 chr1:11801709-11801789 3.4e-05 36_[+1]_36 chr1:20943748-20943828 3.4e-05 36_[+1]_36 chr19:6460014-6460094 3.4e-05 1_[+1]_71 chr5:125874410-125874490 3.4e-05 65_[+1]_7 chr3:72328037-72328117 3.4e-05 36_[+1]_36 chr11:3465744-3465824 3.4e-05 43_[+1]_29 chr17:80317417-80317497 3.4e-05 43_[+1]_29 chr12:122029181-12202926 3.4e-05 26_[+1]_46 chr16:28993962-28994042 3.4e-05 59_[+1]_13 chr1:40365991-40366071 3.4e-05 30_[+1]_42 chr3:5094103-5094183 3.4e-05 37_[+1]_35 chr19:796364-796444 3.4e-05 71_[+1]_1 chrX:47441294-47441374 3.4e-05 [+1]_72 chr9:131523117-131523197 3.4e-05 6_[+1]_66 chr19:56112585-56112665 3.4e-05 50_[+1]_22 chr19:15559375-15559455 3.4e-05 44_[+1]_28 chr11:68151514-68151594 3.4e-05 21_[+1]_51 chr17:75117763-75117843 7.3e-05 19_[+1]_53 chr1:17249423-17249503 7.3e-05 5_[+1]_67 chr6:138131776-138131856 7.3e-05 20_[+1]_52 chr16:16081149-16081229 7.3e-05 9_[+1]_63 chr12:116822120-11682220 7.3e-05 15_[+1]_57 chr12:113862874-11386295 7.3e-05 21_[+1]_51 chr1:12209137-12209217 7.3e-05 27_[+1]_45 chr1:153520631-153520711 7.3e-05 2_[+1]_70 chr5:131809045-131809125 7.3e-05 28_[+1]_44 chr19:8306706-8306786 7.3e-05 28_[+1]_44 chr22:46664277-46664357 7.3e-05 19_[+1]_53 chr6:43902523-43902603 7.3e-05 32_[+1]_40 chr1:26404157-26404237 7.3e-05 2_[+1]_70 chr5:145214252-145214332 7.3e-05 4_[+1]_68 chr1:26865119-26865199 7.3e-05 17_[+1]_55 chr1:224031727-224031807 7.3e-05 17_[+1]_55 chr15:90605027-90605107 7.3e-05 21_[+1]_51 chr19:48845165-48845245 7.3e-05 43_[+1]_29 chr6:158403776-158403856 7.3e-05 30_[+1]_42 chr19:17726828-17726908 7.3e-05 4_[+1]_68 chr19:38738746-38738826 7.3e-05 36_[+1]_36 chr11:61101302-61101382 7.3e-05 32_[+1]_40 chr3:14876478-14876558 7.3e-05 8_[+1]_64 chr6:31739252-31739332 7.3e-05 20_[+1]_52 chr16:1381441-1381521 7.3e-05 3_[+1]_69 chr5:148809501-148809581 7.3e-05 18_[+1]_54 chr1:31231101-31231181 7.3e-05 65_[+1]_7 chr11:76449799-76449879 7.3e-05 15_[+1]_57 chr10:73397204-73397284 7.3e-05 43_[+1]_29 chr9:130976547-130976627 7.3e-05 29_[+1]_43 chr1:229485297-229485377 7.3e-05 15_[+1]_57 chr1:15775534-15775614 7.3e-05 6_[+1]_66 chr9:130925534-130925614 7.3e-05 35_[+1]_37 chr7:116500190-116500270 7.3e-05 50_[+1]_22 chr9:136029942-136030022 7.3e-05 13_[+1]_59 chr9:135868314-135868394 7.3e-05 25_[+1]_47 chr1:12118549-12118629 0.0001 63_[+1]_9 chr17:46605739-46605819 0.0001 32_[+1]_40 chr7:30189642-30189722 0.0001 68_[+1]_4 chr7:116652443-116652523 0.0001 38_[+1]_34 chr19:40909315-40909395 0.00014 38_[+1]_34 chr15:78024434-78024514 0.00014 23_[+1]_49 chr20:56024174-56024254 0.00014 26_[+1]_46 chr1:31359711-31359791 0.00014 [+1]_72 chr19:8213269-8213349 0.00014 17_[+1]_55 chr19:50368262-50368342 0.00014 12_[+1]_60 chr11:75011377-75011457 0.00014 21_[+1]_51 chr9:131126871-131126951 0.00014 15_[+1]_57 chr5:134493519-134493599 0.00017 30_[+1]_42 chr22:20007656-20007736 0.00017 27_[+1]_45 chr19:38928095-38928175 0.00017 33_[+1]_39 chr14:75765058-75765138 0.00017 32_[+1]_40 chr3:138951375-138951455 0.00019 3_[+1]_69 chr12:114077432-11407751 0.00025 26_[+1]_46 chr11:117973054-11797313 0.00025 19_[+1]_53 chr19:13510730-13510810 0.00025 60_[+1]_12 chr7:73996916-73996996 0.00025 17_[+1]_55 chr22:22405676-22405756 0.00027 59_[+1]_13 chr6:31621666-31621746 0.00027 60_[+1]_12 chr7:32539518-32539598 0.00027 64_[+1]_8 chr9:137216318-137216398 0.00034 34_[+1]_38 chr11:75189853-75189933 0.00034 34_[+1]_38 chr10:49697300-49697380 0.00034 29_[+1]_43 chr5:173204781-173204861 0.00034 7_[+1]_65 chr10:21455561-21455641 0.00034 35_[+1]_37 chr1:154126683-154126763 0.00034 33_[+1]_39 chr15:55611916-55611996 0.00045 27_[+1]_45 chr10:74071525-74071605 0.00045 7_[+1]_65 chr1:11840621-11840701 0.00055 20_[+1]_52 chr1:39676500-39676580 0.00055 17_[+1]_55 chr19:55679109-55679189 0.00055 41_[+1]_31 chr9:132178053-132178133 0.00055 24_[+1]_48 chr16:85599586-85599666 0.00055 40_[+1]_32 chr7:75994994-75995074 0.00055 28_[+1]_44 chr19:8315637-8315717 0.00055 6_[+1]_66 chr1:155036910-155036990 0.00063 65_[+1]_7 chr11:74808400-74808480 0.00063 31_[+1]_41 chr12:122370198-12237027 0.00063 7_[+1]_65 chr20:35489717-35489797 0.00063 22_[+1]_50 chr19:45799287-45799367 0.00063 1_[+1]_71 chr7:25933752-25933832 0.00063 16_[+1]_56 chr19:1398027-1398107 0.00063 61_[+1]_11 chr17:29877883-29877963 0.00074 26_[+1]_46 chr19:1682340-1682420 0.00077 24_[+1]_48 chr15:68520984-68521064 0.0011 21_[+1]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYCAKTTT width=8 seqs=130 chr19:17716074-17716154 ( 21) CTCAGTTT 1 chr10:99167597-99167677 ( 57) CTCAGTTT 1 chr16:4992245-4992325 ( 31) CTCAGTTT 1 chr22:37669758-37669838 ( 28) CTCAGTTT 1 chr19:3362660-3362740 ( 48) CTCAGTTT 1 chr16:70472273-70472353 ( 32) CTCAGTTT 1 chr1:16471300-16471380 ( 35) CTCAGTTT 1 chr1:16421440-16421520 ( 10) CTCAGTTT 1 chr6:37605486-37605566 ( 2) CTCAGTTT 1 chr10:45933757-45933837 ( 45) CTCAGTTT 1 chr19:1247841-1247921 ( 6) CTCAGTTT 1 chr16:16684936-16685016 ( 67) CTCAGTTT 1 chr1:53095535-53095615 ( 26) CTCAGTTT 1 chr5:172192932-172193012 ( 58) CTCAGTTT 1 chr22:26880257-26880337 ( 46) CTCAGTTT 1 chr4:81049335-81049415 ( 48) CTCAGTTT 1 chr6:16056823-16056903 ( 46) CTCAGTTT 1 chr19:45506906-45506986 ( 24) CTCAGTTT 1 chr6:3397689-3397769 ( 40) CTCAGTTT 1 chr9:135820765-135820845 ( 39) CTCAGTTT 1 chr10:72425731-72425811 ( 38) CTCAGTTT 1 chr21:33893218-33893298 ( 32) CTCAGTTT 1 chr19:4599465-4599545 ( 35) CTCAGTTT 1 chr12:117038898-11703897 ( 38) CTCAGTTT 1 chr19:3398121-3398201 ( 55) CTCAGTTT 1 chr4:3551937-3552017 ( 16) CTCAGTTT 1 chr10:52078069-52078149 ( 29) CTCAGTTT 1 chr1:39280974-39281054 ( 33) CTCAGTTT 1 chr1:11801709-11801789 ( 37) CTCAGTTT 1 chr1:20943748-20943828 ( 37) CTCAGTTT 1 chr19:6460014-6460094 ( 2) CTCAGTTT 1 chr5:125874410-125874490 ( 66) CTCAGTTT 1 chr3:72328037-72328117 ( 37) CTCAGTTT 1 chr11:3465744-3465824 ( 44) CTCAGTTT 1 chr17:80317417-80317497 ( 44) CTCAGTTT 1 chr12:122029181-12202926 ( 27) CTCAGTTT 1 chr16:28993962-28994042 ( 60) CTCAGTTT 1 chr1:40365991-40366071 ( 31) CTCAGTTT 1 chr3:5094103-5094183 ( 38) CTCAGTTT 1 chr19:796364-796444 ( 72) CTCAGTTT 1 chrX:47441294-47441374 ( 1) CTCAGTTT 1 chr9:131523117-131523197 ( 7) CTCAGTTT 1 chr19:56112585-56112665 ( 51) CTCAGTTT 1 chr19:15559375-15559455 ( 45) CTCAGTTT 1 chr11:68151514-68151594 ( 22) CTCAGTTT 1 chr17:75117763-75117843 ( 20) CCCATTTT 1 chr1:17249423-17249503 ( 6) CCCATTTT 1 chr6:138131776-138131856 ( 21) CCCATTTT 1 chr16:16081149-16081229 ( 10) CCCATTTT 1 chr12:116822120-11682220 ( 16) CCCATTTT 1 chr12:113862874-11386295 ( 22) CCCATTTT 1 chr1:12209137-12209217 ( 28) CCCATTTT 1 chr1:153520631-153520711 ( 3) CCCATTTT 1 chr5:131809045-131809125 ( 29) CCCATTTT 1 chr19:8306706-8306786 ( 29) CCCATTTT 1 chr22:46664277-46664357 ( 20) CCCATTTT 1 chr6:43902523-43902603 ( 33) CCCATTTT 1 chr1:26404157-26404237 ( 3) CCCATTTT 1 chr5:145214252-145214332 ( 5) CCCATTTT 1 chr1:26865119-26865199 ( 18) CCCATTTT 1 chr1:224031727-224031807 ( 18) CCCATTTT 1 chr15:90605027-90605107 ( 22) CCCATTTT 1 chr19:48845165-48845245 ( 44) CCCATTTT 1 chr6:158403776-158403856 ( 31) CCCATTTT 1 chr19:17726828-17726908 ( 5) CCCATTTT 1 chr19:38738746-38738826 ( 37) CCCATTTT 1 chr11:61101302-61101382 ( 33) CCCATTTT 1 chr3:14876478-14876558 ( 9) CCCATTTT 1 chr6:31739252-31739332 ( 21) CCCATTTT 1 chr16:1381441-1381521 ( 4) CCCATTTT 1 chr5:148809501-148809581 ( 19) CCCATTTT 1 chr1:31231101-31231181 ( 66) CCCATTTT 1 chr11:76449799-76449879 ( 16) CCCATTTT 1 chr10:73397204-73397284 ( 44) CCCATTTT 1 chr9:130976547-130976627 ( 30) CCCATTTT 1 chr1:229485297-229485377 ( 16) CCCATTTT 1 chr1:15775534-15775614 ( 7) CCCATTTT 1 chr9:130925534-130925614 ( 36) CCCATTTT 1 chr7:116500190-116500270 ( 51) CTCATTTT 1 chr9:136029942-136030022 ( 14) CCCATTTT 1 chr9:135868314-135868394 ( 26) CCCATTTT 1 chr1:12118549-12118629 ( 64) CTCAGTTC 1 chr17:46605739-46605819 ( 33) CTCAGTTC 1 chr7:30189642-30189722 ( 69) CTCAGTTC 1 chr7:116652443-116652523 ( 39) CTCAGTTC 1 chr19:40909315-40909395 ( 39) CCCATTTC 1 chr15:78024434-78024514 ( 24) CCCATTTC 1 chr20:56024174-56024254 ( 27) CCCATTTC 1 chr1:31359711-31359791 ( 1) CCCATTTC 1 chr19:8213269-8213349 ( 18) CCCATTTC 1 chr19:50368262-50368342 ( 13) CCCATTTC 1 chr11:75011377-75011457 ( 22) CCCATTTC 1 chr9:131126871-131126951 ( 16) CCCATTTC 1 chr5:134493519-134493599 ( 31) CTCAGTGT 1 chr22:20007656-20007736 ( 28) CTCAGTGT 1 chr19:38928095-38928175 ( 34) CTCAGTGT 1 chr14:75765058-75765138 ( 33) CTCAGTGT 1 chr3:138951375-138951455 ( 4) CACAGTTT 1 chr12:114077432-11407751 ( 27) CCCATTGT 1 chr11:117973054-11797313 ( 20) CCCATTGT 1 chr19:13510730-13510810 ( 61) CTCAGTTG 1 chr7:73996916-73996996 ( 18) CCCAGTTG 1 chr22:22405676-22405756 ( 60) CACATTTT 1 chr6:31621666-31621746 ( 61) CACATTTT 1 chr7:32539518-32539598 ( 65) CACATTTT 1 chr9:137216318-137216398 ( 35) CCCACTTT 1 chr11:75189853-75189933 ( 35) CCCATTTG 1 chr10:49697300-49697380 ( 30) CCCATTTG 1 chr5:173204781-173204861 ( 8) CCCACTTT 1 chr10:21455561-21455641 ( 36) CCCATTTG 1 chr1:154126683-154126763 ( 34) CTCACTTT 1 chr15:55611916-55611996 ( 28) CTCAATTT 1 chr10:74071525-74071605 ( 8) CTCAATTT 1 chr1:11840621-11840701 ( 21) CTCAGCTT 1 chr1:39676500-39676580 ( 18) CTCTGTTT 1 chr19:55679109-55679189 ( 42) CTCAGTCT 1 chr9:132178053-132178133 ( 25) CTCAGTCT 1 chr16:85599586-85599666 ( 41) CTCTGTTT 1 chr7:75994994-75995074 ( 29) CCCAGCTT 1 chr19:8315637-8315717 ( 7) CTCTGTTT 1 chr1:155036910-155036990 ( 66) CTCATTTA 1 chr11:74808400-74808480 ( 32) TTCATTTT 1 chr12:122370198-12237027 ( 8) TCCATTTT 1 chr20:35489717-35489797 ( 23) CCCATTTA 1 chr19:45799287-45799367 ( 2) TCCATTTT 1 chr7:25933752-25933832 ( 17) CCCATTTA 1 chr19:1398027-1398107 ( 62) TCCATTTT 1 chr17:29877883-29877963 ( 27) CTCATTCT 1 chr19:1682340-1682420 ( 25) CCCAGTGC 1 chr15:68520984-68521064 ( 22) CTCAGCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.87896 E= 5.6e-114 -1367 197 -1367 -309 -308 86 -1367 99 -1367 202 -1367 -1367 191 -1367 -1367 -351 -408 -342 112 81 -1367 -342 -1367 190 -1367 -342 -210 181 -350 -120 -258 166 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 130 E= 5.6e-114 0.000000 0.969231 0.000000 0.030769 0.030769 0.446154 0.000000 0.523077 0.000000 1.000000 0.000000 0.000000 0.976923 0.000000 0.000000 0.023077 0.015385 0.023077 0.500000 0.461538 0.000000 0.023077 0.000000 0.976923 0.000000 0.023077 0.053846 0.923077 0.023077 0.107692 0.038462 0.830769 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYCAKTTT MEME-1 regular expression -------------------------------------------------------------------------------- C[TC]CA[GT]TTT -------------------------------------------------------------------------------- Time 5.50 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAMTGRG MEME-2 width = 8 sites = 131 llr = 989 E-value = 1.8e-089 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 6a85::51 pos.-specific C 2::4:::: probability G 1:21:a59 matrix T ::::a::: bits 2.1 * 1.9 ** 1.7 * ** * 1.5 * ** * Relative 1.3 ** ** * Entropy 1.1 ** ** * (10.9 bits) 0.8 ** **** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAATGGG consensus GC A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:11840621-11840701 39 1.46e-05 acacatctgt aaaatggg gataatgtag chr1:39676500-39676580 37 1.46e-05 cctcatctgc aaaatggg tttaattatg chr19:3362660-3362740 65 1.46e-05 tctcatctgt aaaatggg accacatg chr1:16471300-16471380 53 1.46e-05 cctcatctgt aaaatggg gatcaagtcc chr6:37605486-37605566 20 1.46e-05 cctcatctgt aaaatggg tccaatggtg chr10:45933757-45933837 63 1.46e-05 ccccccatgt aaaatggg tacagcaagg chr19:1247841-1247921 24 1.46e-05 cttcatctgt aaaatggg gtaatgccca chr15:55611916-55611996 46 1.46e-05 gctcgtctgt aaaatggg gctaataata chr12:123867387-12386746 33 1.46e-05 ccccatctgt aaaatggg tgggtgtgaa chr1:53095535-53095615 44 1.46e-05 tcctacccat aaaatggg CGCATAATTG chr9:132334073-132334153 49 1.46e-05 tcccatctgt aaaatggg catagtggca chr4:81049335-81049415 66 1.46e-05 tcctatcttt aaaatggg aataata chr11:65254224-65254304 47 1.46e-05 cctcatctgt aaaatggg taggtgctgt chr16:4375346-4375426 14 1.46e-05 ttgcatctgt aaaatggg gatgaaacag chr6:16056823-16056903 64 1.46e-05 gctcatctat aaaatggg gacacaaat chr2:10611251-10611331 4 1.46e-05 tgt aaaatggg gataacaaca chr6:3397689-3397769 58 1.46e-05 ccttaactgt aaaatggg gctatttgtg chr11:75255072-75255152 73 1.46e-05 tctcatctat aaaatggg chr21:33893218-33893298 50 1.46e-05 cctcatctgt aaaatggg cataataatg chr16:14380399-14380479 55 1.46e-05 GCCCCTCTGT AAAATGGG CGCTTGTGAA chr19:38928095-38928175 52 1.46e-05 tctcatctgg aaaatggg gacaagatta chr11:33957780-33957860 56 1.46e-05 cctcatctat aaaatggg catatttgcc chr16:85359898-85359978 55 1.46e-05 actcatctgt aaaatggg gatgatTGTT chr1:39280974-39281054 51 1.46e-05 cttccactgt aaaatggg aataacagta chr1:11801709-11801789 55 1.46e-05 tctcagctgt aaaatggg gataataaga chr7:116652443-116652523 56 1.46e-05 cttcatctct aaaatggg gataatacct chr10:74071525-74071605 26 1.46e-05 ccccatctgt aaaatggg actagtaata chr1:20943748-20943828 55 1.46e-05 cctcatcagt aaaatggg catcatgata chr12:122029181-12202926 45 1.46e-05 tctcatctgt aaaatggg gtcacatgaa chr12:125358886-12535896 39 1.46e-05 ccccatctgt aaaatggg gctaataaga chr7:116500190-116500270 69 1.46e-05 tttcttctgt aaaatggg tata chr9:131523117-131523197 25 1.46e-05 cctcatctga aaaatggg gataataggc chr19:56112585-56112665 69 1.46e-05 ccccatctgc aaaatggg acag chr6:6862397-6862477 7 4.50e-05 TTCTGT AAActggg ccccaacttc chr9:137216318-137216398 53 6.07e-05 acagatgaga aaactgag atacaaggag chr6:37016135-37016215 6 6.07e-05 taaga aaactgag gccccgagaa chr16:16081149-16081229 28 6.07e-05 acagatgcgg aaactgag gtttagttgc chr19:40909315-40909395 57 6.07e-05 agagatgaga aaactgag gcacagaaag chr11:75189853-75189933 53 6.07e-05 acagttcaac aaactgag gctcagagaa chr1:12209137-12209217 46 6.07e-05 acagatggga aaactgag ccccatagag chr5:173204781-173204861 26 6.07e-05 acagatcaga aaactgag gtggaaaggg chr5:131809045-131809125 47 6.07e-05 acagatgaag aaactgag gctacaaaag chr6:43902523-43902603 51 6.07e-05 acagatttgg aaactgag actggagaaa chr1:26404157-26404237 21 6.07e-05 acagatgaga aaactgag tcacacagag chr11:117973054-11797313 38 6.07e-05 acagatgagg aaactgag aactaagaag chr5:176790721-176790801 17 6.07e-05 agagaggaaa aaactgag gcacagagag chr12:122370198-12237027 26 6.07e-05 acagaagaag aaactgag gctcagagtg chr1:224031727-224031807 36 6.07e-05 acagatgatg aaactgag ggacaagttt chr18:47808372-47808452 63 6.07e-05 CACCGCAGGT AAACTGAG GCACGCGGGA chr19:3720084-3720164 31 6.07e-05 acagatgtgg aaactgag gaacagagag chr19:48845165-48845245 62 6.07e-05 ccagatgaga aaactgag gctcagagag chr6:158403776-158403856 49 6.07e-05 gcagatgagc aaactgag gcctaaagag chr19:17726828-17726908 23 6.07e-05 acagatgaga aaactgag gctcagggag chr19:4344125-4344205 23 6.07e-05 TGGCGAGGGG AAACTGAG GCCCGGGGCT chr3:14876478-14876558 27 6.07e-05 acaggcagga aaactgag gctttgagac chr7:25933752-25933832 35 6.07e-05 ccagctgagc aaactgag gctaaaggtt chr11:75011377-75011457 40 6.07e-05 acagatgaga aaactgag gcacagggag chr16:1381441-1381521 23 6.07e-05 cagaagaggg aaactgag gcccgggcag chr5:148809501-148809581 38 6.07e-05 cagatgagaa aaactgag gcttatttaa chr11:76449799-76449879 34 6.07e-05 gcaggtgaga aaactgag gcccagCAAA chr9:130976547-130976627 48 6.07e-05 actgatgtgg aaactgag gctcagagag chr1:15775534-15775614 25 6.07e-05 acagatgaga aaactgag gccagacagg chr8:145056782-145056862 29 6.07e-05 ccaaataagg aaactgag gcctggagct chr19:11373351-11373431 52 6.07e-05 AGGGCTGGGG AAACTGAG GCTGAGGAGG chr19:17716074-17716154 39 8.76e-05 tgccatctgt caaatggg tgtgttgaac chr22:37669758-37669838 46 8.76e-05 cctggtctgt caaatggg aaACAGTCAC chr1:24235100-24235180 52 8.76e-05 cttcatctgt caaatggg CCCATTGGAA chr9:132178053-132178133 43 8.76e-05 tcccatctgg caaatggg gataataatc chr12:117038898-11703897 56 8.76e-05 tcccacctgt caaatggg cacgacattc chr11:2951253-2951333 63 1.56e-04 tcgcttctgt gaaatggg aacagtaacc chr19:55679109-55679189 60 1.56e-04 gctgctctgt gaaatggg aatGTAGCGT chr9:135820765-135820845 57 1.56e-04 cttcctctgt gaaatggg cataatgaca chr1:26371084-26371164 31 1.56e-04 cactctctgt gaaatggg ccaccaatat chr14:75765058-75765138 51 1.56e-04 tcttatctgt gaaatggg aataattgtg chr1:154126683-154126763 52 1.56e-04 cctcgtctgt gaaatggg agtaatagta chr16:70472273-70472353 67 2.12e-04 CGAGCCGTGA GAACTGGG CCACTG chr1:153520631-153520711 21 2.12e-04 acagatgagg aagctgag gttTCTGCTG chr20:56024174-56024254 45 2.12e-04 acaggcaagg aagctgag gctGGTAGCG chr19:8306706-8306786 47 2.12e-04 tcagatggga caactgag gcccaggaag chr11:61101302-61101382 51 2.12e-04 acagatgagg aagctgag gcttagggag chr9:135868314-135868394 44 2.12e-04 acagatgggg caactgag gcccagagag chr22:20007656-20007736 46 2.39e-04 ttacatctat aaagtggg atgaaagaac chr22:21100032-21100112 18 2.39e-04 gctcatctgt aaagtggg cataaccctc chr17:21199896-21199976 70 2.53e-04 ttccccaagt aaagtgag gtt chr12:114077432-11407751 36 2.66e-04 Acccattgta cagatggg gaagttgagg chr1:31359711-31359791 10 2.66e-04 cccatttca cagatggg caaactaaaa chr3:5101177-5101257 66 2.82e-04 gagcctctgt aaaatgga cataatg chr3:138951375-138951455 23 2.82e-04 ttttgtgtgt aaaatgga aattgtatcc chr3:5094103-5094183 57 2.82e-04 tctcatctgt aaaatgga gacaataaaa chr19:10534164-10534244 11 3.19e-04 acacaaccag gagatggg ggagctggaa chr17:75117763-75117843 29 3.19e-04 tcccatttta cagatgag gaaacgggct chr1:17249423-17249503 15 3.19e-04 acccatttta cagatgag gaaacagagg chr6:138131776-138131856 30 3.19e-04 acccattttg cagatgag gaaatagagg chr15:78024434-78024514 33 3.19e-04 gcccatttca cagatgag gagactgaag chr22:46664277-46664357 29 3.19e-04 Gcccatttta cagatgag gaaggtggag chr22:26880257-26880337 64 3.19e-04 tctcatctgt gagatggg gatgaaaat chr1:26865119-26865199 27 3.19e-04 ccccatttta cagatgag aaaattgagg chr19:38738746-38738826 46 3.19e-04 Acccattttc cagatgag gatactgagg chr1:16474212-16474292 8 3.19e-04 catttta cagatgag gaaacccagg chr9:131126871-131126951 25 3.19e-04 ccccatttca cagatgag gaatctgagg chr10:73397204-73397284 53 3.19e-04 tcccatttta cagatgag gaaattgagg chr19:842191-842271 19 3.19e-04 atttttagta gagatggg gtttcaccac chr19:703454-703534 43 4.04e-04 GATGGTGTTT GAGCTGGG GCAGGCCAGG chr19:14083288-14083368 67 4.04e-04 TCATGCATAT Cagctgag gcccag chr6:159072104-159072184 62 4.04e-04 cctcatctgt agaatggg tacatttact chr19:45799287-45799367 11 4.04e-04 ctccatttta cagctgag gacataaggc chr17:46605739-46605819 16 4.04e-04 TCTCTTTATC CAGCTGAG ATCTTAAAGC chr19:10728281-10728361 65 4.61e-04 CATCAAACCT AGACTGGG AACGGACC chr19:3398121-3398201 73 4.61e-04 ccccaaatgc agaatgag chr18:48368496-48368576 58 4.61e-04 gcctcccaag gagctgag actagaggca chr19:45822516-45822596 5 5.15e-04 gagg agactgag gttcaggagg chr22:39695921-39696001 19 5.15e-04 tcagatgatg agactgag gcacagtgtg chr20:35489717-35489797 41 5.15e-04 acggatgagg agactgag gcctggCTTG chr19:5170476-5170556 62 5.15e-04 gaccctgagg aaggtggg agccatggag chr6:16225716-16225796 22 5.15e-04 ctggattaac aaaatgtg gcatatatac chr11:85877490-85877570 5 5.15e-04 taaa aaaatgtg gtacatacac chr16:4992245-4992325 50 5.69e-04 cctcatctgg gaagtggg cgcaaaccta chr5:172192932-172193012 49 5.69e-04 gtctttctca caaGtgag cctcagtttt chr1:180472788-180472868 70 6.27e-04 acacagctag caaatgga gga chr19:45506906-45506986 43 6.27e-04 cctcatctgt aagatgga cagaataaca chr16:85599586-85599666 59 6.27e-04 tctcatctgc taaatggg gccagtagcg chr11:3465744-3465824 62 6.27e-04 tgtcatccgt taaatggg catagtcaca chr15:90605027-90605107 39 7.36e-04 tacagatcag gaaatgga gacaggtgga chr20:32503542-32503622 64 8.38e-04 tgttgggcat gaactgga cgtctctgg chr22:17036568-17036648 19 8.38e-04 aacatggatg aagctgaa gggcattatg chr1:32411397-32411477 4 8.38e-04 TTG GAAATGAA GCATCAAGGT chr19:10526472-10526552 40 9.15e-04 caggtggaca gaactgaa agtgcaaagg chr1:156632092-156632172 64 9.15e-04 CGAGAAGGGA GAACTGAA AAAGGCAGG chr1:12599798-12599878 36 1.10e-03 ttttttgata gaggtggg atctcactat chr20:45317287-45317367 6 1.10e-03 tttta caggtgag aaaaccgagg chr15:41193379-41193459 6 1.10e-03 ttact aagctgtg tgaccttggg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:11840621-11840701 1.5e-05 38_[+2]_34 chr1:39676500-39676580 1.5e-05 36_[+2]_36 chr19:3362660-3362740 1.5e-05 64_[+2]_8 chr1:16471300-16471380 1.5e-05 52_[+2]_20 chr6:37605486-37605566 1.5e-05 19_[+2]_53 chr10:45933757-45933837 1.5e-05 62_[+2]_10 chr19:1247841-1247921 1.5e-05 23_[+2]_49 chr15:55611916-55611996 1.5e-05 45_[+2]_27 chr12:123867387-12386746 1.5e-05 32_[+2]_40 chr1:53095535-53095615 1.5e-05 43_[+2]_29 chr9:132334073-132334153 1.5e-05 48_[+2]_24 chr4:81049335-81049415 1.5e-05 65_[+2]_7 chr11:65254224-65254304 1.5e-05 46_[+2]_26 chr16:4375346-4375426 1.5e-05 13_[+2]_59 chr6:16056823-16056903 1.5e-05 63_[+2]_9 chr2:10611251-10611331 1.5e-05 3_[+2]_69 chr6:3397689-3397769 1.5e-05 57_[+2]_15 chr11:75255072-75255152 1.5e-05 72_[+2] chr21:33893218-33893298 1.5e-05 49_[+2]_23 chr16:14380399-14380479 1.5e-05 54_[+2]_18 chr19:38928095-38928175 1.5e-05 51_[+2]_21 chr11:33957780-33957860 1.5e-05 55_[+2]_17 chr16:85359898-85359978 1.5e-05 54_[+2]_18 chr1:39280974-39281054 1.5e-05 50_[+2]_22 chr1:11801709-11801789 1.5e-05 54_[+2]_18 chr7:116652443-116652523 1.5e-05 55_[+2]_17 chr10:74071525-74071605 1.5e-05 25_[+2]_47 chr1:20943748-20943828 1.5e-05 54_[+2]_18 chr12:122029181-12202926 1.5e-05 44_[+2]_28 chr12:125358886-12535896 1.5e-05 38_[+2]_34 chr7:116500190-116500270 1.5e-05 68_[+2]_4 chr9:131523117-131523197 1.5e-05 24_[+2]_48 chr19:56112585-56112665 1.5e-05 68_[+2]_4 chr6:6862397-6862477 4.5e-05 6_[+2]_66 chr9:137216318-137216398 6.1e-05 52_[+2]_20 chr6:37016135-37016215 6.1e-05 5_[+2]_67 chr16:16081149-16081229 6.1e-05 27_[+2]_45 chr19:40909315-40909395 6.1e-05 56_[+2]_16 chr11:75189853-75189933 6.1e-05 52_[+2]_20 chr1:12209137-12209217 6.1e-05 45_[+2]_27 chr5:173204781-173204861 6.1e-05 25_[+2]_47 chr5:131809045-131809125 6.1e-05 46_[+2]_26 chr6:43902523-43902603 6.1e-05 50_[+2]_22 chr1:26404157-26404237 6.1e-05 20_[+2]_52 chr11:117973054-11797313 6.1e-05 37_[+2]_35 chr5:176790721-176790801 6.1e-05 16_[+2]_56 chr12:122370198-12237027 6.1e-05 25_[+2]_47 chr1:224031727-224031807 6.1e-05 35_[+2]_37 chr18:47808372-47808452 6.1e-05 62_[+2]_10 chr19:3720084-3720164 6.1e-05 30_[+2]_42 chr19:48845165-48845245 6.1e-05 61_[+2]_11 chr6:158403776-158403856 6.1e-05 48_[+2]_24 chr19:17726828-17726908 6.1e-05 22_[+2]_50 chr19:4344125-4344205 6.1e-05 22_[+2]_50 chr3:14876478-14876558 6.1e-05 26_[+2]_46 chr7:25933752-25933832 6.1e-05 34_[+2]_38 chr11:75011377-75011457 6.1e-05 39_[+2]_33 chr16:1381441-1381521 6.1e-05 22_[+2]_50 chr5:148809501-148809581 6.1e-05 37_[+2]_35 chr11:76449799-76449879 6.1e-05 33_[+2]_39 chr9:130976547-130976627 6.1e-05 47_[+2]_25 chr1:15775534-15775614 6.1e-05 24_[+2]_48 chr8:145056782-145056862 6.1e-05 28_[+2]_44 chr19:11373351-11373431 6.1e-05 51_[+2]_21 chr19:17716074-17716154 8.8e-05 38_[+2]_34 chr22:37669758-37669838 8.8e-05 45_[+2]_27 chr1:24235100-24235180 8.8e-05 51_[+2]_21 chr9:132178053-132178133 8.8e-05 42_[+2]_30 chr12:117038898-11703897 8.8e-05 55_[+2]_17 chr11:2951253-2951333 0.00016 62_[+2]_10 chr19:55679109-55679189 0.00016 59_[+2]_13 chr9:135820765-135820845 0.00016 56_[+2]_16 chr1:26371084-26371164 0.00016 30_[+2]_42 chr14:75765058-75765138 0.00016 50_[+2]_22 chr1:154126683-154126763 0.00016 51_[+2]_21 chr16:70472273-70472353 0.00021 66_[+2]_6 chr1:153520631-153520711 0.00021 20_[+2]_52 chr20:56024174-56024254 0.00021 44_[+2]_28 chr19:8306706-8306786 0.00021 46_[+2]_26 chr11:61101302-61101382 0.00021 50_[+2]_22 chr9:135868314-135868394 0.00021 43_[+2]_29 chr22:20007656-20007736 0.00024 45_[+2]_27 chr22:21100032-21100112 0.00024 17_[+2]_55 chr17:21199896-21199976 0.00025 69_[+2]_3 chr12:114077432-11407751 0.00027 35_[+2]_37 chr1:31359711-31359791 0.00027 9_[+2]_63 chr3:5101177-5101257 0.00028 65_[+2]_7 chr3:138951375-138951455 0.00028 22_[+2]_50 chr3:5094103-5094183 0.00028 56_[+2]_16 chr19:10534164-10534244 0.00032 10_[+2]_62 chr17:75117763-75117843 0.00032 28_[+2]_44 chr1:17249423-17249503 0.00032 14_[+2]_58 chr6:138131776-138131856 0.00032 29_[+2]_43 chr15:78024434-78024514 0.00032 32_[+2]_40 chr22:46664277-46664357 0.00032 28_[+2]_44 chr22:26880257-26880337 0.00032 63_[+2]_9 chr1:26865119-26865199 0.00032 26_[+2]_46 chr19:38738746-38738826 0.00032 45_[+2]_27 chr1:16474212-16474292 0.00032 7_[+2]_65 chr9:131126871-131126951 0.00032 24_[+2]_48 chr10:73397204-73397284 0.00032 52_[+2]_20 chr19:842191-842271 0.00032 18_[+2]_54 chr19:703454-703534 0.0004 42_[+2]_30 chr19:14083288-14083368 0.0004 66_[+2]_6 chr6:159072104-159072184 0.0004 61_[+2]_11 chr19:45799287-45799367 0.0004 10_[+2]_62 chr17:46605739-46605819 0.0004 15_[+2]_57 chr19:10728281-10728361 0.00046 64_[+2]_8 chr19:3398121-3398201 0.00046 72_[+2] chr18:48368496-48368576 0.00046 57_[+2]_15 chr19:45822516-45822596 0.00051 4_[+2]_68 chr22:39695921-39696001 0.00051 18_[+2]_54 chr20:35489717-35489797 0.00051 40_[+2]_32 chr19:5170476-5170556 0.00051 61_[+2]_11 chr6:16225716-16225796 0.00051 21_[+2]_51 chr11:85877490-85877570 0.00051 4_[+2]_68 chr16:4992245-4992325 0.00057 49_[+2]_23 chr5:172192932-172193012 0.00057 48_[+2]_24 chr1:180472788-180472868 0.00063 69_[+2]_3 chr19:45506906-45506986 0.00063 42_[+2]_30 chr16:85599586-85599666 0.00063 58_[+2]_14 chr11:3465744-3465824 0.00063 61_[+2]_11 chr15:90605027-90605107 0.00074 38_[+2]_34 chr20:32503542-32503622 0.00084 63_[+2]_9 chr22:17036568-17036648 0.00084 18_[+2]_54 chr1:32411397-32411477 0.00084 3_[+2]_69 chr19:10526472-10526552 0.00091 39_[+2]_33 chr1:156632092-156632172 0.00091 63_[+2]_9 chr1:12599798-12599878 0.0011 35_[+2]_37 chr20:45317287-45317367 0.0011 5_[+2]_67 chr15:41193379-41193459 0.0011 5_[+2]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAMTGRG width=8 seqs=131 chr1:11840621-11840701 ( 39) AAAATGGG 1 chr1:39676500-39676580 ( 37) AAAATGGG 1 chr19:3362660-3362740 ( 65) AAAATGGG 1 chr1:16471300-16471380 ( 53) AAAATGGG 1 chr6:37605486-37605566 ( 20) AAAATGGG 1 chr10:45933757-45933837 ( 63) AAAATGGG 1 chr19:1247841-1247921 ( 24) AAAATGGG 1 chr15:55611916-55611996 ( 46) AAAATGGG 1 chr12:123867387-12386746 ( 33) AAAATGGG 1 chr1:53095535-53095615 ( 44) AAAATGGG 1 chr9:132334073-132334153 ( 49) AAAATGGG 1 chr4:81049335-81049415 ( 66) AAAATGGG 1 chr11:65254224-65254304 ( 47) AAAATGGG 1 chr16:4375346-4375426 ( 14) AAAATGGG 1 chr6:16056823-16056903 ( 64) AAAATGGG 1 chr2:10611251-10611331 ( 4) AAAATGGG 1 chr6:3397689-3397769 ( 58) AAAATGGG 1 chr11:75255072-75255152 ( 73) AAAATGGG 1 chr21:33893218-33893298 ( 50) AAAATGGG 1 chr16:14380399-14380479 ( 55) AAAATGGG 1 chr19:38928095-38928175 ( 52) AAAATGGG 1 chr11:33957780-33957860 ( 56) AAAATGGG 1 chr16:85359898-85359978 ( 55) AAAATGGG 1 chr1:39280974-39281054 ( 51) AAAATGGG 1 chr1:11801709-11801789 ( 55) AAAATGGG 1 chr7:116652443-116652523 ( 56) AAAATGGG 1 chr10:74071525-74071605 ( 26) AAAATGGG 1 chr1:20943748-20943828 ( 55) AAAATGGG 1 chr12:122029181-12202926 ( 45) AAAATGGG 1 chr12:125358886-12535896 ( 39) AAAATGGG 1 chr7:116500190-116500270 ( 69) AAAATGGG 1 chr9:131523117-131523197 ( 25) AAAATGGG 1 chr19:56112585-56112665 ( 69) AAAATGGG 1 chr6:6862397-6862477 ( 7) AAACTGGG 1 chr9:137216318-137216398 ( 53) AAACTGAG 1 chr6:37016135-37016215 ( 6) AAACTGAG 1 chr16:16081149-16081229 ( 28) AAACTGAG 1 chr19:40909315-40909395 ( 57) AAACTGAG 1 chr11:75189853-75189933 ( 53) AAACTGAG 1 chr1:12209137-12209217 ( 46) AAACTGAG 1 chr5:173204781-173204861 ( 26) AAACTGAG 1 chr5:131809045-131809125 ( 47) AAACTGAG 1 chr6:43902523-43902603 ( 51) AAACTGAG 1 chr1:26404157-26404237 ( 21) AAACTGAG 1 chr11:117973054-11797313 ( 38) AAACTGAG 1 chr5:176790721-176790801 ( 17) AAACTGAG 1 chr12:122370198-12237027 ( 26) AAACTGAG 1 chr1:224031727-224031807 ( 36) AAACTGAG 1 chr18:47808372-47808452 ( 63) AAACTGAG 1 chr19:3720084-3720164 ( 31) AAACTGAG 1 chr19:48845165-48845245 ( 62) AAACTGAG 1 chr6:158403776-158403856 ( 49) AAACTGAG 1 chr19:17726828-17726908 ( 23) AAACTGAG 1 chr19:4344125-4344205 ( 23) AAACTGAG 1 chr3:14876478-14876558 ( 27) AAACTGAG 1 chr7:25933752-25933832 ( 35) AAACTGAG 1 chr11:75011377-75011457 ( 40) AAACTGAG 1 chr16:1381441-1381521 ( 23) AAACTGAG 1 chr5:148809501-148809581 ( 38) AAACTGAG 1 chr11:76449799-76449879 ( 34) AAACTGAG 1 chr9:130976547-130976627 ( 48) AAACTGAG 1 chr1:15775534-15775614 ( 25) AAACTGAG 1 chr8:145056782-145056862 ( 29) AAACTGAG 1 chr19:11373351-11373431 ( 52) AAACTGAG 1 chr19:17716074-17716154 ( 39) CAAATGGG 1 chr22:37669758-37669838 ( 46) CAAATGGG 1 chr1:24235100-24235180 ( 52) CAAATGGG 1 chr9:132178053-132178133 ( 43) CAAATGGG 1 chr12:117038898-11703897 ( 56) CAAATGGG 1 chr11:2951253-2951333 ( 63) GAAATGGG 1 chr19:55679109-55679189 ( 60) GAAATGGG 1 chr9:135820765-135820845 ( 57) GAAATGGG 1 chr1:26371084-26371164 ( 31) GAAATGGG 1 chr14:75765058-75765138 ( 51) GAAATGGG 1 chr1:154126683-154126763 ( 52) GAAATGGG 1 chr16:70472273-70472353 ( 67) GAACTGGG 1 chr1:153520631-153520711 ( 21) AAGCTGAG 1 chr20:56024174-56024254 ( 45) AAGCTGAG 1 chr19:8306706-8306786 ( 47) CAACTGAG 1 chr11:61101302-61101382 ( 51) AAGCTGAG 1 chr9:135868314-135868394 ( 44) CAACTGAG 1 chr22:20007656-20007736 ( 46) AAAGTGGG 1 chr22:21100032-21100112 ( 18) AAAGTGGG 1 chr17:21199896-21199976 ( 70) AAAGTGAG 1 chr12:114077432-11407751 ( 36) CAGATGGG 1 chr1:31359711-31359791 ( 10) CAGATGGG 1 chr3:5101177-5101257 ( 66) AAAATGGA 1 chr3:138951375-138951455 ( 23) AAAATGGA 1 chr3:5094103-5094183 ( 57) AAAATGGA 1 chr19:10534164-10534244 ( 11) GAGATGGG 1 chr17:75117763-75117843 ( 29) CAGATGAG 1 chr1:17249423-17249503 ( 15) CAGATGAG 1 chr6:138131776-138131856 ( 30) CAGATGAG 1 chr15:78024434-78024514 ( 33) CAGATGAG 1 chr22:46664277-46664357 ( 29) CAGATGAG 1 chr22:26880257-26880337 ( 64) GAGATGGG 1 chr1:26865119-26865199 ( 27) CAGATGAG 1 chr19:38738746-38738826 ( 46) CAGATGAG 1 chr1:16474212-16474292 ( 8) CAGATGAG 1 chr9:131126871-131126951 ( 25) CAGATGAG 1 chr10:73397204-73397284 ( 53) CAGATGAG 1 chr19:842191-842271 ( 19) GAGATGGG 1 chr19:703454-703534 ( 43) GAGCTGGG 1 chr19:14083288-14083368 ( 67) CAGCTGAG 1 chr6:159072104-159072184 ( 62) AGAATGGG 1 chr19:45799287-45799367 ( 11) CAGCTGAG 1 chr17:46605739-46605819 ( 16) CAGCTGAG 1 chr19:10728281-10728361 ( 65) AGACTGGG 1 chr19:3398121-3398201 ( 73) AGAATGAG 1 chr18:48368496-48368576 ( 58) GAGCTGAG 1 chr19:45822516-45822596 ( 5) AGACTGAG 1 chr22:39695921-39696001 ( 19) AGACTGAG 1 chr20:35489717-35489797 ( 41) AGACTGAG 1 chr19:5170476-5170556 ( 62) AAGGTGGG 1 chr6:16225716-16225796 ( 22) AAAATGTG 1 chr11:85877490-85877570 ( 5) AAAATGTG 1 chr16:4992245-4992325 ( 50) GAAGTGGG 1 chr5:172192932-172193012 ( 49) CAAGTGAG 1 chr1:180472788-180472868 ( 70) CAAATGGA 1 chr19:45506906-45506986 ( 43) AAGATGGA 1 chr16:85599586-85599666 ( 59) TAAATGGG 1 chr11:3465744-3465824 ( 62) TAAATGGG 1 chr15:90605027-90605107 ( 39) GAAATGGA 1 chr20:32503542-32503622 ( 64) GAACTGGA 1 chr22:17036568-17036648 ( 19) AAGCTGAA 1 chr1:32411397-32411477 ( 4) GAAATGAA 1 chr19:10526472-10526552 ( 40) GAACTGAA 1 chr1:156632092-156632172 ( 64) GAACTGAA 1 chr1:12599798-12599878 ( 36) GAGGTGGG 1 chr20:45317287-45317367 ( 6) CAGGTGAG 1 chr15:41193379-41193459 ( 6) AAGCTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.86712 E= 1.8e-089 132 -37 -67 -410 187 -1368 -233 -1368 158 -1368 -6 -1368 108 66 -192 -1368 -1368 -1368 -1368 193 -1368 -1368 212 -1368 81 -1368 117 -352 -163 -1368 199 -1368 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 131 E= 1.8e-089 0.648855 0.190840 0.145038 0.015267 0.954198 0.000000 0.045802 0.000000 0.778626 0.000000 0.221374 0.000000 0.549618 0.389313 0.061069 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.458015 0.000000 0.519084 0.022901 0.083969 0.000000 0.916031 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAMTGRG MEME-2 regular expression -------------------------------------------------------------------------------- AA[AG][AC]TG[GA]G -------------------------------------------------------------------------------- Time 9.10 secs. ******************************************************************************** ******************************************************************************** MOTIF CYYMTCTG MEME-3 width = 8 sites = 85 llr = 648 E-value = 5.9e-034 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 Description -------------------------------------------------------------------------------- Simplified A :1:5:::: pos.-specific C 8564:a:: probability G 1:::1::a matrix T 154:9:a: bits 2.1 * * 1.9 *** 1.7 *** 1.5 *** Relative 1.3 * **** Entropy 1.1 * * **** (11.0 bits) 0.8 * * **** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCCATCTG consensus TTC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:4992245-4992325 41 3.18e-05 ctcagttttc ctcatctg ggaagtgggc chr1:39676500-39676580 28 3.18e-05 ctctgttttc ctcatctg caaaatgggt chr19:3362660-3362740 56 3.18e-05 gcctcagttt ctcatctg taaaatggga chr1:16471300-16471380 44 3.18e-05 cctcagtttc ctcatctg taaaatgggg chr6:6862397-6862477 25 3.18e-05 ccccaacttc ctcatctg tgaaatgggT chr6:37605486-37605566 11 3.18e-05 cctcagtttc ctcatctg taaaatgggt chr12:123867387-12386746 24 3.18e-05 cctctattgc cccatctg taaaatgggt chr9:132334073-132334153 40 3.18e-05 cctcaggctt cccatctg taaaatgggc chr22:26880257-26880337 55 3.18e-05 cctcagtttt ctcatctg tgagatgggg chr6:159072104-159072184 53 3.18e-05 actcactctc ctcatctg tagaatgggt chr11:65254224-65254304 38 3.18e-05 cctccatttc ctcatctg taaaatgggt chr19:45506906-45506986 34 3.18e-05 ctcagttttc ctcatctg taagatggac chr9:132178053-132178133 34 3.18e-05 cctcagtctt cccatctg gcaaatgggg chr22:21100032-21100112 9 3.18e-05 tcaatgtg ctcatctg taaagtgggc chr19:13510730-13510810 70 3.18e-05 cctcagttgt ctcatctg taa chr21:33893218-33893298 41 3.18e-05 cctcagtttc ctcatctg taaaatgggc chr19:4599465-4599545 44 3.18e-05 cctcagttta ctcatctg taccgtgggc chr19:38928095-38928175 43 3.18e-05 cctcagtgtt ctcatctg gaaaatgggg chr4:3551937-3552017 25 3.18e-05 cctcagtttg ctcatctg caaagggggc chr16:85599586-85599666 50 3.18e-05 tctctgtttt ctcatctg ctaaatgggg chr16:85359898-85359978 46 3.18e-05 cctcagtgaa ctcatctg taaaatgggg chr19:38738746-38738826 22 3.18e-05 cctctgtttc ctcatctg caaagtAccc chr10:74071525-74071605 17 3.18e-05 gctcaatttc cccatctg taaaatggga chr12:122029181-12202926 36 3.18e-05 tctcagtttt ctcatctg taaaatgggg chr12:125358886-12535896 30 3.18e-05 cctcgattgc cccatctg taaaatgggg chr3:5094103-5094183 48 3.18e-05 ctcagttttt ctcatctg taaaatggag chr9:131523117-131523197 16 3.18e-05 cctcagtttc ctcatctg aaaaatgggg chr19:56112585-56112665 60 3.18e-05 cctcagtttc cccatctg caaaatggga chr16:16684936-16685016 56 6.20e-05 CCATATCAaa ctcctctg agactcagtt chr10:72425731-72425811 47 6.20e-05 tctcagtttg cccctctg tacaataggc chr16:14380399-14380479 46 6.20e-05 CCTCCGCTTG CCCCTCTG TAAAATGGGC chr9:126058602-126058682 17 6.20e-05 attgtttcac cccctctg cctacaacct chr14:75765058-75765138 42 9.58e-05 cctcagtgtt cttatctg tgaaatggga chr17:21199896-21199976 46 1.28e-04 agtggcttca cctctctg agcctgttcc chr19:46088478-46088558 47 1.28e-04 agtggcataa cctctctg gacttcagta chr1:31376683-31376763 63 1.28e-04 agtcactgag cctctctg tgcctcagtt chr1:15750029-15750109 55 1.28e-04 ggtcacttaa cctctctg agccttggtc chr1:22234354-22234434 45 1.28e-04 agtcatttct cctctctg tgcctccgtt chr1:53095535-53095615 15 1.28e-04 agttacttaa cctctctg ggtctcagtt chr19:18113281-18113361 13 1.28e-04 AGGGCATCAT CCTCTCTG GGCCGCCCTG chr16:4396636-4396716 46 1.28e-04 aattactcaa cctctctg aAtctttttt chr19:14144883-14144963 55 1.28e-04 agtcacttaa cctctctg agcATGTTAA chr7:76048290-76048370 55 1.28e-04 agttccttaa cttctctg agtgcttatt chr1:16509264-16509344 45 1.28e-04 agttacttaa cctctctg tgcctctggt chr19:3052235-3052315 53 1.28e-04 TTCAGCTCAC CCTCTCTG GGCTAGGCAT chr7:30189642-30189722 58 1.28e-04 agttacttaa cctctctg tttctcagtt chr17:46322969-46323049 42 1.28e-04 agttacttaa cctctctg tgcttcaatg chr5:125874410-125874490 55 1.28e-04 agttactcaa cctctctg tgcctcagtt chr16:21565033-21565113 46 1.28e-04 agtagcttag cctctctg agcctaagcc chr16:28993962-28994042 50 1.28e-04 agtgacttaa cctctctg tgctcagttt chr15:41193379-41193459 36 1.28e-04 agtttctgaa cctctctg tgctcagatt chr1:11840621-11840701 30 1.44e-04 tctcagctta cacatctg taaaatgggg chr10:99167597-99167677 67 1.44e-04 ctcagttttc cacatctg taaaat chr1:155036910-155036990 34 1.93e-04 ctagccgaat cacctctg ggcaagtctc chr1:16421440-16421520 19 1.93e-04 cctcagttta tccatctg gacaatgggg chr1:24235100-24235180 43 1.93e-04 ccttagtggc ttcatctg tcaaatgggC chr19:1247841-1247921 15 1.93e-04 cctcagtttc ttcatctg taaaatgggg chr1:40365991-40366071 40 1.93e-04 cctcagtttt tccatctg ttaatgggga chr9:135820765-135820845 48 2.58e-04 cctcagtttc ttcctctg tgaaatgggc chr19:17716074-17716154 30 3.43e-04 cctcagtttt gccatctg tcaaatgggt chr11:74808400-74808480 40 3.43e-04 tcttcatttt gtcatctg tggaatgggt chr15:55611916-55611996 37 3.43e-04 cctcaatttg ctcgtctg taaaatgggg chr19:4056031-4056111 54 3.43e-04 aGCCTGTTTC CCCAGCTG TACACAAAAG chr1:11801709-11801789 46 3.43e-04 cctcagtttt ctcagctg taaaatgggg chr1:154126683-154126763 43 3.43e-04 cctcactttc ctcgtctg tgaaatggga chr19:796364-796444 29 3.43e-04 CCTCAGTTTC CCCAGCTG TAGGTGAGAG chr19:17500960-17501040 64 3.61e-04 CTCCAGTCCT CATATCTG TGGGATGAC chr5:172192932-172193012 67 4.15e-04 cctcagtttt gtcctctg taaaat chr15:68520984-68521064 11 4.15e-04 cccctaccaa gtcctctg agactcagct chr15:85731618-85731698 29 4.15e-04 CCTCCAGGAA GTCCTCTG GATTGACTCC chr3:5101177-5101257 49 4.97e-04 agtgacttaa catctctg agcctctgta chr12:117038898-11703897 47 4.97e-04 cctcagtttt cccacctg tcaaatgggc chr10:52078069-52078149 38 4.97e-04 cctcagtttt ctcacctg taaaatggca chr19:55679109-55679189 31 5.32e-04 gaccagtcac cctttctg agcctcagtc chr11:64528408-64528488 56 5.32e-04 ggttgcttta cctttctg agctttggat chr12:54753719-54753799 35 5.32e-04 ATTGGGAAGT CCTTTCTG AGGTCTAACC chr17:48765850-48765930 57 5.32e-04 atttgcaaaa cctttctg agcctgtttc chr19:703454-703534 66 5.94e-04 CCAGGGCATA TTTCTCTG GTGAAAG chr19:3321010-3321090 34 5.94e-04 CGTTCACACC CTCCCCTG CAAGCCGCTG chr1:39280974-39281054 22 5.94e-04 agttaattaa tctctctg accctcagtt chr1:26371084-26371164 1 5.94e-04 . tctctctg agcctcaact chr1:17042628-17042708 10 6.85e-04 gcagggacg cttgtctg gttcaccagc chr19:56859826-56859906 14 6.85e-04 agggggagct cttagctg acagccagta chr19:3471981-3472061 52 7.43e-04 CACAGTGCGT CCTCGCTG ACACGACCCC chr19:47847857-47847937 48 8.05e-04 tccaggaagc cctccctg aTTTATGCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:4992245-4992325 3.2e-05 40_[+3]_32 chr1:39676500-39676580 3.2e-05 27_[+3]_45 chr19:3362660-3362740 3.2e-05 55_[+3]_17 chr1:16471300-16471380 3.2e-05 43_[+3]_29 chr6:6862397-6862477 3.2e-05 24_[+3]_48 chr6:37605486-37605566 3.2e-05 10_[+3]_62 chr12:123867387-12386746 3.2e-05 23_[+3]_49 chr9:132334073-132334153 3.2e-05 39_[+3]_33 chr22:26880257-26880337 3.2e-05 54_[+3]_18 chr6:159072104-159072184 3.2e-05 52_[+3]_20 chr11:65254224-65254304 3.2e-05 37_[+3]_35 chr19:45506906-45506986 3.2e-05 33_[+3]_39 chr9:132178053-132178133 3.2e-05 33_[+3]_39 chr22:21100032-21100112 3.2e-05 8_[+3]_64 chr19:13510730-13510810 3.2e-05 69_[+3]_3 chr21:33893218-33893298 3.2e-05 40_[+3]_32 chr19:4599465-4599545 3.2e-05 43_[+3]_29 chr19:38928095-38928175 3.2e-05 42_[+3]_30 chr4:3551937-3552017 3.2e-05 24_[+3]_48 chr16:85599586-85599666 3.2e-05 49_[+3]_23 chr16:85359898-85359978 3.2e-05 45_[+3]_27 chr19:38738746-38738826 3.2e-05 21_[+3]_51 chr10:74071525-74071605 3.2e-05 16_[+3]_56 chr12:122029181-12202926 3.2e-05 35_[+3]_37 chr12:125358886-12535896 3.2e-05 29_[+3]_43 chr3:5094103-5094183 3.2e-05 47_[+3]_25 chr9:131523117-131523197 3.2e-05 15_[+3]_57 chr19:56112585-56112665 3.2e-05 59_[+3]_13 chr16:16684936-16685016 6.2e-05 55_[+3]_17 chr10:72425731-72425811 6.2e-05 46_[+3]_26 chr16:14380399-14380479 6.2e-05 45_[+3]_27 chr9:126058602-126058682 6.2e-05 16_[+3]_56 chr14:75765058-75765138 9.6e-05 41_[+3]_31 chr17:21199896-21199976 0.00013 45_[+3]_27 chr19:46088478-46088558 0.00013 46_[+3]_26 chr1:31376683-31376763 0.00013 62_[+3]_10 chr1:15750029-15750109 0.00013 54_[+3]_18 chr1:22234354-22234434 0.00013 44_[+3]_28 chr1:53095535-53095615 0.00013 14_[+3]_58 chr19:18113281-18113361 0.00013 12_[+3]_60 chr16:4396636-4396716 0.00013 45_[+3]_27 chr19:14144883-14144963 0.00013 54_[+3]_18 chr7:76048290-76048370 0.00013 54_[+3]_18 chr1:16509264-16509344 0.00013 44_[+3]_28 chr19:3052235-3052315 0.00013 52_[+3]_20 chr7:30189642-30189722 0.00013 57_[+3]_15 chr17:46322969-46323049 0.00013 41_[+3]_31 chr5:125874410-125874490 0.00013 54_[+3]_18 chr16:21565033-21565113 0.00013 45_[+3]_27 chr16:28993962-28994042 0.00013 49_[+3]_23 chr15:41193379-41193459 0.00013 35_[+3]_37 chr1:11840621-11840701 0.00014 29_[+3]_43 chr10:99167597-99167677 0.00014 66_[+3]_6 chr1:155036910-155036990 0.00019 33_[+3]_39 chr1:16421440-16421520 0.00019 18_[+3]_54 chr1:24235100-24235180 0.00019 42_[+3]_30 chr19:1247841-1247921 0.00019 14_[+3]_58 chr1:40365991-40366071 0.00019 39_[+3]_33 chr9:135820765-135820845 0.00026 47_[+3]_25 chr19:17716074-17716154 0.00034 29_[+3]_43 chr11:74808400-74808480 0.00034 39_[+3]_33 chr15:55611916-55611996 0.00034 36_[+3]_36 chr19:4056031-4056111 0.00034 53_[+3]_19 chr1:11801709-11801789 0.00034 45_[+3]_27 chr1:154126683-154126763 0.00034 42_[+3]_30 chr19:796364-796444 0.00034 28_[+3]_44 chr19:17500960-17501040 0.00036 63_[+3]_9 chr5:172192932-172193012 0.00042 66_[+3]_6 chr15:68520984-68521064 0.00042 10_[+3]_62 chr15:85731618-85731698 0.00042 28_[+3]_44 chr3:5101177-5101257 0.0005 48_[+3]_24 chr12:117038898-11703897 0.0005 46_[+3]_26 chr10:52078069-52078149 0.0005 37_[+3]_35 chr19:55679109-55679189 0.00053 30_[+3]_42 chr11:64528408-64528488 0.00053 55_[+3]_17 chr12:54753719-54753799 0.00053 34_[+3]_38 chr17:48765850-48765930 0.00053 56_[+3]_16 chr19:703454-703534 0.00059 65_[+3]_7 chr19:3321010-3321090 0.00059 33_[+3]_39 chr1:39280974-39281054 0.00059 21_[+3]_51 chr1:26371084-26371164 0.00059 [+3]_72 chr1:17042628-17042708 0.00069 9_[+3]_63 chr19:56859826-56859906 0.00069 13_[+3]_59 chr19:3471981-3472061 0.00074 51_[+3]_21 chr19:47847857-47847937 0.00081 47_[+3]_25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYYMTCTG width=8 seqs=85 chr16:4992245-4992325 ( 41) CTCATCTG 1 chr1:39676500-39676580 ( 28) CTCATCTG 1 chr19:3362660-3362740 ( 56) CTCATCTG 1 chr1:16471300-16471380 ( 44) CTCATCTG 1 chr6:6862397-6862477 ( 25) CTCATCTG 1 chr6:37605486-37605566 ( 11) CTCATCTG 1 chr12:123867387-12386746 ( 24) CCCATCTG 1 chr9:132334073-132334153 ( 40) CCCATCTG 1 chr22:26880257-26880337 ( 55) CTCATCTG 1 chr6:159072104-159072184 ( 53) CTCATCTG 1 chr11:65254224-65254304 ( 38) CTCATCTG 1 chr19:45506906-45506986 ( 34) CTCATCTG 1 chr9:132178053-132178133 ( 34) CCCATCTG 1 chr22:21100032-21100112 ( 9) CTCATCTG 1 chr19:13510730-13510810 ( 70) CTCATCTG 1 chr21:33893218-33893298 ( 41) CTCATCTG 1 chr19:4599465-4599545 ( 44) CTCATCTG 1 chr19:38928095-38928175 ( 43) CTCATCTG 1 chr4:3551937-3552017 ( 25) CTCATCTG 1 chr16:85599586-85599666 ( 50) CTCATCTG 1 chr16:85359898-85359978 ( 46) CTCATCTG 1 chr19:38738746-38738826 ( 22) CTCATCTG 1 chr10:74071525-74071605 ( 17) CCCATCTG 1 chr12:122029181-12202926 ( 36) CTCATCTG 1 chr12:125358886-12535896 ( 30) CCCATCTG 1 chr3:5094103-5094183 ( 48) CTCATCTG 1 chr9:131523117-131523197 ( 16) CTCATCTG 1 chr19:56112585-56112665 ( 60) CCCATCTG 1 chr16:16684936-16685016 ( 56) CTCCTCTG 1 chr10:72425731-72425811 ( 47) CCCCTCTG 1 chr16:14380399-14380479 ( 46) CCCCTCTG 1 chr9:126058602-126058682 ( 17) CCCCTCTG 1 chr14:75765058-75765138 ( 42) CTTATCTG 1 chr17:21199896-21199976 ( 46) CCTCTCTG 1 chr19:46088478-46088558 ( 47) CCTCTCTG 1 chr1:31376683-31376763 ( 63) CCTCTCTG 1 chr1:15750029-15750109 ( 55) CCTCTCTG 1 chr1:22234354-22234434 ( 45) CCTCTCTG 1 chr1:53095535-53095615 ( 15) CCTCTCTG 1 chr19:18113281-18113361 ( 13) CCTCTCTG 1 chr16:4396636-4396716 ( 46) CCTCTCTG 1 chr19:14144883-14144963 ( 55) CCTCTCTG 1 chr7:76048290-76048370 ( 55) CTTCTCTG 1 chr1:16509264-16509344 ( 45) CCTCTCTG 1 chr19:3052235-3052315 ( 53) CCTCTCTG 1 chr7:30189642-30189722 ( 58) CCTCTCTG 1 chr17:46322969-46323049 ( 42) CCTCTCTG 1 chr5:125874410-125874490 ( 55) CCTCTCTG 1 chr16:21565033-21565113 ( 46) CCTCTCTG 1 chr16:28993962-28994042 ( 50) CCTCTCTG 1 chr15:41193379-41193459 ( 36) CCTCTCTG 1 chr1:11840621-11840701 ( 30) CACATCTG 1 chr10:99167597-99167677 ( 67) CACATCTG 1 chr1:155036910-155036990 ( 34) CACCTCTG 1 chr1:16421440-16421520 ( 19) TCCATCTG 1 chr1:24235100-24235180 ( 43) TTCATCTG 1 chr19:1247841-1247921 ( 15) TTCATCTG 1 chr1:40365991-40366071 ( 40) TCCATCTG 1 chr9:135820765-135820845 ( 48) TTCCTCTG 1 chr19:17716074-17716154 ( 30) GCCATCTG 1 chr11:74808400-74808480 ( 40) GTCATCTG 1 chr15:55611916-55611996 ( 37) CTCGTCTG 1 chr19:4056031-4056111 ( 54) CCCAGCTG 1 chr1:11801709-11801789 ( 46) CTCAGCTG 1 chr1:154126683-154126763 ( 43) CTCGTCTG 1 chr19:796364-796444 ( 29) CCCAGCTG 1 chr19:17500960-17501040 ( 64) CATATCTG 1 chr5:172192932-172193012 ( 67) GTCCTCTG 1 chr15:68520984-68521064 ( 11) GTCCTCTG 1 chr15:85731618-85731698 ( 29) GTCCTCTG 1 chr3:5101177-5101257 ( 49) CATCTCTG 1 chr12:117038898-11703897 ( 47) CCCACCTG 1 chr10:52078069-52078149 ( 38) CTCACCTG 1 chr19:55679109-55679189 ( 31) CCTTTCTG 1 chr11:64528408-64528488 ( 56) CCTTTCTG 1 chr12:54753719-54753799 ( 35) CCTTTCTG 1 chr17:48765850-48765930 ( 57) CCTTTCTG 1 chr19:703454-703534 ( 66) TTTCTCTG 1 chr19:3321010-3321090 ( 34) CTCCCCTG 1 chr1:39280974-39281054 ( 22) TCTCTCTG 1 chr1:26371084-26371164 ( 1) TCTCTCTG 1 chr1:17042628-17042708 ( 10) CTTGTCTG 1 chr19:56859826-56859906 ( 14) CTTAGCTG 1 chr19:3471981-3472061 ( 52) CCTCGCTG 1 chr19:47847857-47847937 ( 48) CCTCCCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.73946 E= 5.9e-034 -1305 178 -197 -148 -215 93 -1305 84 -1305 134 -1305 52 99 70 -271 -248 -1305 -239 -197 177 -1305 202 -1305 -1305 -1305 -1305 -1305 193 -1305 -1305 212 -1305 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 85 E= 5.9e-034 0.000000 0.847059 0.058824 0.094118 0.058824 0.470588 0.000000 0.470588 0.000000 0.623529 0.000000 0.376471 0.517647 0.400000 0.035294 0.047059 0.000000 0.047059 0.058824 0.894118 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYYMTCTG MEME-3 regular expression -------------------------------------------------------------------------------- C[CT][CT][AC]TCTG -------------------------------------------------------------------------------- Time 12.47 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGAGRRG MEME-4 width = 8 sites = 54 llr = 457 E-value = 3.1e-025 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 Description -------------------------------------------------------------------------------- Simplified A :91a:64: pos.-specific C a::::::: probability G ::9:746a matrix T :1::3::: bits 2.1 * * 1.9 * * * 1.7 * ** * 1.5 **** * Relative 1.3 ***** * Entropy 1.1 ***** ** (12.2 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGAGAGG consensus TGA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:11297332-11297412 23 1.21e-05 caaggaaaaa cagagagg ttgagtaact chr12:113862874-11386295 49 1.21e-05 gaaacaggca cagagagg ttgtgacact chr1:22228977-22229057 26 1.21e-05 aaaccaggct cagagagg tacagttacc chr20:48688196-48688276 58 1.21e-05 cggaaacgca cagagagg ttaaggagcc chr5:176790721-176790801 28 1.21e-05 aactgaggca cagagagg ttaagtacct chr1:31359711-31359791 30 1.21e-05 aactaaaatt cagagagg tgaagcaact chr7:73029436-73029516 27 1.21e-05 gaaacaagtt cagagagg ctaggcaact chr10:80807478-80807558 32 1.21e-05 atttgatgct cagagagg ctaagtaact chr9:126079641-126079721 24 1.21e-05 gattaaggtt cagagagg ttaggtaact chr19:3720084-3720164 42 1.21e-05 aactgaggaa cagagagg ggcagtaagt chr19:45799287-45799367 30 1.21e-05 acataaggca cagagagg ttaagtaact chr17:73509554-73509634 30 1.21e-05 aactgcagcc cagagagg ttaagtgact chr1:16474212-16474292 28 1.21e-05 aacccaggca cagagagg tcaaggaaat chr11:61101302-61101382 17 1.21e-05 CGCAGAATGC CAGAGAGG AGCCAacccc chr9:131126871-131126951 45 1.21e-05 atctgaggct cagagagg caaagtctct chr7:75994994-75995074 71 1.21e-05 agcagagaca cagagagg ct chr7:73996916-73996996 45 1.21e-05 gaaacaggct cagagagg ttgagtgact chr9:130976547-130976627 59 1.21e-05 aactgaggct cagagagg tatggtcatt chr19:8315637-8315717 34 1.21e-05 acttgaggtt cagagagg tcaagtcatt chr9:135868314-135868394 55 1.21e-05 aactgaggcc cagagagg tcaaACATAA chr22:46664277-46664357 49 2.29e-05 aggtggaggt cagagggg ccaggagacg chr10:49697300-49697380 59 3.66e-05 aaccgaggct cagagaag ttaagaactt chr9:136029942-136030022 45 3.66e-05 ttgaggatca cagagaag aaagtaGTGA chr1:235119422-235119502 14 3.66e-05 aaccaaggct cagagaag tgaagtgact chr16:84647151-84647231 58 4.88e-05 ggttaatgag cagaggag tgacttgatt chr3:14876478-14876558 54 4.88e-05 catcacatgg cAGAGGAG GCAAACAGAC chr12:122029181-12202926 69 4.88e-05 tgaaagttac cAGAGGAg gccg chr12:116822120-11682220 25 6.27e-05 tcccatttta cagatagg aaaaccaagg chr1:12209137-12209217 37 7.50e-05 tcccatttta cagatggg aaaactgagc chr19:8306706-8306786 38 7.50e-05 acccattttt cagatggg acaactgagg chr5:131809045-131809125 6 9.07e-05 tgaga cagataag acaaatgatg chr9:137216318-137216398 44 1.05e-04 tcccacttta cagatgag aaaactgaga chr1:153520631-153520711 12 1.05e-04 tcccatttta cagatgag gaagctgagg chr1:26404157-26404237 12 1.05e-04 ccccatttta cagatgag aaaactgagt chr11:117973054-11797313 29 1.05e-04 tcccattgta cagatgag gaaactgaga chr19:48845165-48845245 53 1.05e-04 ccccattttc cagatgag aaaactgagg chr6:158403776-158403856 40 1.05e-04 ccccattttg cagatgag caaactgagg chr19:17726828-17726908 14 1.05e-04 ccccatttta cagatgag aaaactgagg chr11:75011377-75011457 31 1.05e-04 tcccatttca cagatgag aaaactgagg chr5:148809501-148809581 28 1.05e-04 ccccatttta cagatgag aaaaactgag chr1:15775534-15775614 16 1.05e-04 gcccatttta cagatgag aaaactgagg chr19:17500960-17501040 5 1.18e-04 aacc caaagagg gaaagtgacC chr4:3551937-3552017 33 1.30e-04 tgctcatctg caaagggg gctgggattc chr1:954589-954669 71 1.30e-04 TCTGAAGGGA CAAAGGGG GC chr20:45317287-45317367 24 1.43e-04 aaaaccgagg ctgagagg ctaaataact chr1:180472788-180472868 31 1.66e-04 gaaatcagca cagagtgg ttaagtaact chr7:2670861-2670941 22 1.66e-04 caccgatgca cagagtgg ttaagtaact chr19:842191-842271 66 1.66e-04 aactcctgac ctgaggGG GATtttc chr19:3471981-3472061 4 1.81e-04 gca caaagaag cgaggtaagg chr10:73397204-73397284 26 2.25e-04 gtagccctat caaatagg ctgcattctt chr19:1682340-1682420 34 2.65e-04 ccccagtgcc ctgaggag aaaacccaca chr19:11373351-11373431 61 2.65e-04 GAAACTGAGG CTGAGGAG GGAAGTTAGG chr8:145056782-145056862 20 3.23e-04 ccccatgctc caaataag gaaactgagg chr19:5480580-5480660 23 3.50e-04 gaggagaggg cagggagg ggctggggca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:11297332-11297412 1.2e-05 22_[+4]_50 chr12:113862874-11386295 1.2e-05 48_[+4]_24 chr1:22228977-22229057 1.2e-05 25_[+4]_47 chr20:48688196-48688276 1.2e-05 57_[+4]_15 chr5:176790721-176790801 1.2e-05 27_[+4]_45 chr1:31359711-31359791 1.2e-05 29_[+4]_43 chr7:73029436-73029516 1.2e-05 26_[+4]_46 chr10:80807478-80807558 1.2e-05 31_[+4]_41 chr9:126079641-126079721 1.2e-05 23_[+4]_49 chr19:3720084-3720164 1.2e-05 41_[+4]_31 chr19:45799287-45799367 1.2e-05 29_[+4]_43 chr17:73509554-73509634 1.2e-05 29_[+4]_43 chr1:16474212-16474292 1.2e-05 27_[+4]_45 chr11:61101302-61101382 1.2e-05 16_[+4]_56 chr9:131126871-131126951 1.2e-05 44_[+4]_28 chr7:75994994-75995074 1.2e-05 70_[+4]_2 chr7:73996916-73996996 1.2e-05 44_[+4]_28 chr9:130976547-130976627 1.2e-05 58_[+4]_14 chr19:8315637-8315717 1.2e-05 33_[+4]_39 chr9:135868314-135868394 1.2e-05 54_[+4]_18 chr22:46664277-46664357 2.3e-05 48_[+4]_24 chr10:49697300-49697380 3.7e-05 58_[+4]_14 chr9:136029942-136030022 3.7e-05 44_[+4]_28 chr1:235119422-235119502 3.7e-05 13_[+4]_59 chr16:84647151-84647231 4.9e-05 57_[+4]_15 chr3:14876478-14876558 4.9e-05 53_[+4]_19 chr12:122029181-12202926 4.9e-05 68_[+4]_4 chr12:116822120-11682220 6.3e-05 24_[+4]_48 chr1:12209137-12209217 7.5e-05 36_[+4]_36 chr19:8306706-8306786 7.5e-05 37_[+4]_35 chr5:131809045-131809125 9.1e-05 5_[+4]_67 chr9:137216318-137216398 0.0001 43_[+4]_29 chr1:153520631-153520711 0.0001 11_[+4]_61 chr1:26404157-26404237 0.0001 11_[+4]_61 chr11:117973054-11797313 0.0001 28_[+4]_44 chr19:48845165-48845245 0.0001 52_[+4]_20 chr6:158403776-158403856 0.0001 39_[+4]_33 chr19:17726828-17726908 0.0001 13_[+4]_59 chr11:75011377-75011457 0.0001 30_[+4]_42 chr5:148809501-148809581 0.0001 27_[+4]_45 chr1:15775534-15775614 0.0001 15_[+4]_57 chr19:17500960-17501040 0.00012 4_[+4]_68 chr4:3551937-3552017 0.00013 32_[+4]_40 chr1:954589-954669 0.00013 70_[+4]_2 chr20:45317287-45317367 0.00014 23_[+4]_49 chr1:180472788-180472868 0.00017 30_[+4]_42 chr7:2670861-2670941 0.00017 21_[+4]_51 chr19:842191-842271 0.00017 65_[+4]_7 chr19:3471981-3472061 0.00018 3_[+4]_69 chr10:73397204-73397284 0.00022 25_[+4]_47 chr19:1682340-1682420 0.00026 33_[+4]_39 chr19:11373351-11373431 0.00026 60_[+4]_12 chr8:145056782-145056862 0.00032 19_[+4]_53 chr19:5480580-5480660 0.00035 22_[+4]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGAGRRG width=8 seqs=54 chr16:11297332-11297412 ( 23) CAGAGAGG 1 chr12:113862874-11386295 ( 49) CAGAGAGG 1 chr1:22228977-22229057 ( 26) CAGAGAGG 1 chr20:48688196-48688276 ( 58) CAGAGAGG 1 chr5:176790721-176790801 ( 28) CAGAGAGG 1 chr1:31359711-31359791 ( 30) CAGAGAGG 1 chr7:73029436-73029516 ( 27) CAGAGAGG 1 chr10:80807478-80807558 ( 32) CAGAGAGG 1 chr9:126079641-126079721 ( 24) CAGAGAGG 1 chr19:3720084-3720164 ( 42) CAGAGAGG 1 chr19:45799287-45799367 ( 30) CAGAGAGG 1 chr17:73509554-73509634 ( 30) CAGAGAGG 1 chr1:16474212-16474292 ( 28) CAGAGAGG 1 chr11:61101302-61101382 ( 17) CAGAGAGG 1 chr9:131126871-131126951 ( 45) CAGAGAGG 1 chr7:75994994-75995074 ( 71) CAGAGAGG 1 chr7:73996916-73996996 ( 45) CAGAGAGG 1 chr9:130976547-130976627 ( 59) CAGAGAGG 1 chr19:8315637-8315717 ( 34) CAGAGAGG 1 chr9:135868314-135868394 ( 55) CAGAGAGG 1 chr22:46664277-46664357 ( 49) CAGAGGGG 1 chr10:49697300-49697380 ( 59) CAGAGAAG 1 chr9:136029942-136030022 ( 45) CAGAGAAG 1 chr1:235119422-235119502 ( 14) CAGAGAAG 1 chr16:84647151-84647231 ( 58) CAGAGGAG 1 chr3:14876478-14876558 ( 54) CAGAGGAG 1 chr12:122029181-12202926 ( 69) CAGAGGAG 1 chr12:116822120-11682220 ( 25) CAGATAGG 1 chr1:12209137-12209217 ( 37) CAGATGGG 1 chr19:8306706-8306786 ( 38) CAGATGGG 1 chr5:131809045-131809125 ( 6) CAGATAAG 1 chr9:137216318-137216398 ( 44) CAGATGAG 1 chr1:153520631-153520711 ( 12) CAGATGAG 1 chr1:26404157-26404237 ( 12) CAGATGAG 1 chr11:117973054-11797313 ( 29) CAGATGAG 1 chr19:48845165-48845245 ( 53) CAGATGAG 1 chr6:158403776-158403856 ( 40) CAGATGAG 1 chr19:17726828-17726908 ( 14) CAGATGAG 1 chr11:75011377-75011457 ( 31) CAGATGAG 1 chr5:148809501-148809581 ( 28) CAGATGAG 1 chr1:15775534-15775614 ( 16) CAGATGAG 1 chr19:17500960-17501040 ( 5) CAAAGAGG 1 chr4:3551937-3552017 ( 33) CAAAGGGG 1 chr1:954589-954669 ( 71) CAAAGGGG 1 chr20:45317287-45317367 ( 24) CTGAGAGG 1 chr1:180472788-180472868 ( 31) CAGAGTGG 1 chr7:2670861-2670941 ( 22) CAGAGTGG 1 chr19:842191-842271 ( 66) CTGAGGGG 1 chr19:3471981-3472061 ( 4) CAAAGAAG 1 chr10:73397204-73397284 ( 26) CAAATAGG 1 chr19:1682340-1682420 ( 34) CTGAGGAG 1 chr19:11373351-11373431 ( 61) CTGAGGAG 1 chr8:145056782-145056862 ( 20) CAAATAAG 1 chr19:5480580-5480660 ( 23) CAGGGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.59303 E= 3.1e-025 -1240 202 -1240 -1240 183 -1240 -1240 -182 -123 -1240 195 -1240 191 -1240 -363 -1240 -1240 -1240 161 17 114 -1240 76 -282 58 -1240 141 -1240 -1240 -1240 212 -1240 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 54 E= 3.1e-025 0.000000 1.000000 0.000000 0.000000 0.925926 0.000000 0.000000 0.074074 0.111111 0.000000 0.888889 0.000000 0.981481 0.000000 0.018519 0.000000 0.000000 0.000000 0.703704 0.296296 0.574074 0.000000 0.388889 0.037037 0.388889 0.000000 0.611111 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGRRG MEME-4 regular expression -------------------------------------------------------------------------------- CAGA[GT][AG][GA]G -------------------------------------------------------------------------------- Time 15.74 secs. ******************************************************************************** ******************************************************************************** MOTIF CTGTGTGA MEME-5 width = 8 sites = 28 llr = 272 E-value = 1.0e-014 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::::19 pos.-specific C a:1::::: probability G ::9:a:9: matrix T :a:a:a:: bits 2.1 * * 1.9 * * 1.7 ****** 1.5 ******** Relative 1.3 ******** Entropy 1.1 ******** (14.0 bits) 0.8 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CTGTGTGA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:31376683-31376763 36 1.42e-05 ccacttctgg ctgtgtga ctttgagtaa chr1:15750029-15750109 28 1.42e-05 ttccttactg ctgtgtga ctgtgggtgg chr10:45933757-45933837 8 1.42e-05 ttaccta ctgtgtga cttgggagag chr3:5101177-5101257 22 1.42e-05 cacctatcca ctgtgtga cctagagcaa chr1:12118549-12118629 26 1.42e-05 caccctcatg ctgtgtga cctcaggcaa chr11:64528408-64528488 29 1.42e-05 cactgacttg ctgtgtga cctcaagctg chr1:21962704-21962784 40 1.42e-05 cacataacag ctgtgtga ccttggacaa chr16:4396636-4396716 19 1.42e-05 ttctcaatag ctgtgtga ccctggacaa chr19:14144883-14144963 28 1.42e-05 GTTTttattg ctgtgtga cattaggcaa chr19:3052235-3052315 26 1.42e-05 CTGGGCCATG CTGTGTGA CCTGAAGTCT chr7:30189642-30189722 31 1.42e-05 cacttgctgg ctgtgtga ccttagacaa chr17:46322969-46323049 15 1.42e-05 actttactag ctgtgtga ctttgggaaa chr16:85599586-85599666 3 1.42e-05 gg ctgtgtga ctctgggcag chr5:125874410-125874490 28 1.42e-05 catttatcag ctgtgtga cttggggaaa chr16:21565033-21565113 19 1.42e-05 ttctaacttg ctgtgtga ccctgggcaa chr11:3465744-3465824 8 1.42e-05 ctgctac ctgtgtga ctttgagagt chr17:48765850-48765930 30 1.42e-05 TCCCAGGCTg ctgtgtga ccctgggcaa chr16:28993962-28994042 23 1.42e-05 ctcttcccag ctgtgtga cattggacaa chr19:46088478-46088558 20 4.55e-05 catttcctcg ctgtgtaa tattagatga chr10:99167597-99167677 17 4.55e-05 ccaccacttg ctctgtga ccttgaacaa chr1:16509264-16509344 18 4.55e-05 cacttcccag ctgtgtaa ctttggacaa chr1:11801709-11801789 2 4.55e-05 g ctctgtga ccttgggcaa chr18:47808372-47808452 15 8.30e-05 CGCCGAACAG CTGTGGGA GCGCGCGGGG chr10:72425731-72425811 1 8.30e-05 . ctgtgtgg tgttgcaagg chr19:1682340-1682420 63 8.30e-05 tcatccgacc ctgggtga cctttgcggc chr5:172192932-172193012 5 9.65e-05 ccca ctgtgtgc caggcacttt chr1:153520631-153520711 36 1.26e-04 gaggttTCTG CTGTGTCA GTTCTCCCCC chr19:4344125-4344205 63 1.26e-04 GGAAGAGCTC CAGTGTGA GGAGGGGAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:31376683-31376763 1.4e-05 35_[+5]_37 chr1:15750029-15750109 1.4e-05 27_[+5]_45 chr10:45933757-45933837 1.4e-05 7_[+5]_65 chr3:5101177-5101257 1.4e-05 21_[+5]_51 chr1:12118549-12118629 1.4e-05 25_[+5]_47 chr11:64528408-64528488 1.4e-05 28_[+5]_44 chr1:21962704-21962784 1.4e-05 39_[+5]_33 chr16:4396636-4396716 1.4e-05 18_[+5]_54 chr19:14144883-14144963 1.4e-05 27_[+5]_45 chr19:3052235-3052315 1.4e-05 25_[+5]_47 chr7:30189642-30189722 1.4e-05 30_[+5]_42 chr17:46322969-46323049 1.4e-05 14_[+5]_58 chr16:85599586-85599666 1.4e-05 2_[+5]_70 chr5:125874410-125874490 1.4e-05 27_[+5]_45 chr16:21565033-21565113 1.4e-05 18_[+5]_54 chr11:3465744-3465824 1.4e-05 7_[+5]_65 chr17:48765850-48765930 1.4e-05 29_[+5]_43 chr16:28993962-28994042 1.4e-05 22_[+5]_50 chr19:46088478-46088558 4.6e-05 19_[+5]_53 chr10:99167597-99167677 4.6e-05 16_[+5]_56 chr1:16509264-16509344 4.6e-05 17_[+5]_55 chr1:11801709-11801789 4.6e-05 1_[+5]_71 chr18:47808372-47808452 8.3e-05 14_[+5]_58 chr10:72425731-72425811 8.3e-05 [+5]_72 chr19:1682340-1682420 8.3e-05 62_[+5]_10 chr5:172192932-172193012 9.6e-05 4_[+5]_68 chr1:153520631-153520711 0.00013 35_[+5]_37 chr19:4344125-4344205 0.00013 62_[+5]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGTGTGA width=8 seqs=28 chr1:31376683-31376763 ( 36) CTGTGTGA 1 chr1:15750029-15750109 ( 28) CTGTGTGA 1 chr10:45933757-45933837 ( 8) CTGTGTGA 1 chr3:5101177-5101257 ( 22) CTGTGTGA 1 chr1:12118549-12118629 ( 26) CTGTGTGA 1 chr11:64528408-64528488 ( 29) CTGTGTGA 1 chr1:21962704-21962784 ( 40) CTGTGTGA 1 chr16:4396636-4396716 ( 19) CTGTGTGA 1 chr19:14144883-14144963 ( 28) CTGTGTGA 1 chr19:3052235-3052315 ( 26) CTGTGTGA 1 chr7:30189642-30189722 ( 31) CTGTGTGA 1 chr17:46322969-46323049 ( 15) CTGTGTGA 1 chr16:85599586-85599666 ( 3) CTGTGTGA 1 chr5:125874410-125874490 ( 28) CTGTGTGA 1 chr16:21565033-21565113 ( 19) CTGTGTGA 1 chr11:3465744-3465824 ( 8) CTGTGTGA 1 chr17:48765850-48765930 ( 30) CTGTGTGA 1 chr16:28993962-28994042 ( 23) CTGTGTGA 1 chr19:46088478-46088558 ( 20) CTGTGTAA 1 chr10:99167597-99167677 ( 17) CTCTGTGA 1 chr1:16509264-16509344 ( 18) CTGTGTAA 1 chr1:11801709-11801789 ( 2) CTCTGTGA 1 chr18:47808372-47808452 ( 15) CTGTGGGA 1 chr10:72425731-72425811 ( 1) CTGTGTGG 1 chr19:1682340-1682420 ( 63) CTGGGTGA 1 chr5:172192932-172193012 ( 5) CTGTGTGC 1 chr1:153520631-153520711 ( 36) CTGTGTCA 1 chr19:4344125-4344205 ( 63) CAGTGTGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 9.95252 E= 1.0e-014 -1145 202 -1145 -1145 -286 -1145 -1145 188 -1145 -179 201 -1145 -1145 -1145 -269 188 -1145 -1145 212 -1145 -1145 -1145 -269 188 -187 -278 195 -1145 183 -278 -269 -1145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 28 E= 1.0e-014 0.000000 1.000000 0.000000 0.000000 0.035714 0.000000 0.000000 0.964286 0.000000 0.071429 0.928571 0.000000 0.000000 0.000000 0.035714 0.964286 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.035714 0.964286 0.071429 0.035714 0.892857 0.000000 0.928571 0.035714 0.035714 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGTGTGA MEME-5 regular expression -------------------------------------------------------------------------------- CTGTGTGA -------------------------------------------------------------------------------- Time 18.92 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:68151514-68151594 2.28e-02 21_[+1(3.38e-05)]_51 chr19:11373351-11373431 1.32e-03 51_[+2(6.07e-05)]_21 chr8:145056782-145056862 3.54e-03 28_[+2(6.07e-05)]_44 chr19:56859826-56859906 8.54e-02 80 chr1:26186764-26186844 4.84e-01 80 chr19:842191-842271 2.67e-02 80 chr19:15559375-15559455 1.64e-01 44_[+1(3.38e-05)]_28 chr1:32411397-32411477 2.01e-01 80 chr19:56112585-56112665 5.46e-06 50_[+1(3.38e-05)]_1_[+3(3.18e-05)]_\ 1_[+2(1.46e-05)]_4 chr1:47557238-47557318 2.95e-01 80 chr9:131523117-131523197 9.16e-06 6_[+1(3.38e-05)]_1_[+3(3.18e-05)]_1_\ [+2(1.46e-05)]_48 chr15:41193379-41193459 1.55e-04 8_[+5(1.42e-05)]_64 chr1:47341944-47342024 9.40e-01 80 chr1:156632092-156632172 2.00e-01 80 chr9:135868314-135868394 8.34e-05 25_[+1(7.26e-05)]_1_[+4(7.50e-05)]_\ 12_[+4(1.21e-05)]_18 chr15:85731618-85731698 3.05e-01 80 chr9:126058602-126058682 1.05e-01 16_[+3(6.20e-05)]_56 chr1:235119422-235119502 7.24e-02 13_[+4(3.66e-05)]_59 chr1:228267412-228267492 1.58e-01 80 chr9:136029942-136030022 3.35e-03 13_[+1(7.26e-05)]_23_[+4(3.66e-05)]_\ 28 chr7:116500190-116500270 1.33e-04 50_[+1(7.26e-05)]_10_[+2(1.46e-05)]_\ 4 chrX:47441294-47441374 6.40e-02 [+1(3.38e-05)]_1_[+1(7.26e-05)]_63 chr9:130925534-130925614 5.55e-02 35_[+1(7.26e-05)]_37 chr8:37757580-37757660 4.32e-01 80 chr19:796364-796444 6.55e-04 19_[+1(3.38e-05)]_44_[+1(3.38e-05)]_\ 1 chr12:7795655-7795735 9.30e-01 80 chr3:5094103-5094183 1.38e-05 37_[+1(3.38e-05)]_2_[+3(3.18e-05)]_\ 25 chr3:138951375-138951455 9.13e-03 80 chr19:8315637-8315717 8.64e-04 33_[+4(1.21e-05)]_39 chr19:5480580-5480660 5.23e-02 80 chr1:15775534-15775614 6.78e-05 6_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 48 chr1:154126683-154126763 3.80e-04 80 chr19:17500960-17501040 4.97e-04 68_[+5(8.30e-05)]_4 chr6:37014269-37014349 9.58e-01 80 chr12:125358886-12535896 8.71e-06 29_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 34 chr1:229485297-229485377 6.82e-02 15_[+1(7.26e-05)]_57 chr1:17042628-17042708 1.72e-01 80 chr17:30412640-30412720 6.24e-02 80 chr2:24703274-24703354 3.57e-01 80 chr1:40365991-40366071 9.01e-03 30_[+1(3.38e-05)]_42 chr19:1398027-1398107 4.09e-02 80 chr17:29877883-29877963 1.90e-01 80 chr9:130976547-130976627 1.07e-05 29_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 3_[+4(1.21e-05)]_14 chr14:75765058-75765138 1.03e-04 41_[+3(9.58e-05)]_31 chr16:28993962-28994042 1.40e-05 22_[+5(1.42e-05)]_29_[+1(3.38e-05)]_\ 13 chr19:1682340-1682420 2.49e-03 62_[+5(8.30e-05)]_10 chr7:73996916-73996996 9.20e-04 44_[+4(1.21e-05)]_28 chr22:17036568-17036648 4.43e-01 80 chr10:73397204-73397284 1.40e-03 43_[+1(7.26e-05)]_29 chr11:76449799-76449879 1.45e-03 15_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 39 chr1:31231101-31231181 6.36e-02 65_[+1(7.26e-05)]_7 chr7:75994994-75995074 9.30e-04 70_[+4(1.21e-05)]_2 chr17:79474928-79475008 8.84e-01 80 chr17:48765850-48765930 8.27e-03 29_[+5(1.42e-05)]_43 chr5:148809501-148809581 1.61e-04 18_[+1(7.26e-05)]_11_[+2(6.07e-05)]_\ 35 chr12:122029181-12202926 1.14e-07 26_[+1(3.38e-05)]_1_[+3(3.18e-05)]_\ 1_[+2(1.46e-05)]_16_[+4(4.88e-05)]_4 chr17:80317417-80317497 1.51e-01 2_[+1(3.38e-05)]_13_[+1(3.38e-05)]_\ 12_[+1(3.38e-05)]_29 chr9:131126871-131126951 3.75e-04 44_[+4(1.21e-05)]_28 chr16:1381441-1381521 5.45e-04 3_[+1(7.26e-05)]_11_[+2(6.07e-05)]_\ 50 chr11:75011377-75011457 3.43e-04 39_[+2(6.07e-05)]_33 chr7:25933752-25933832 7.94e-03 34_[+2(6.07e-05)]_38 chr10:74026378-74026458 6.98e-01 80 chr11:85877490-85877570 3.38e-01 80 chr16:67195162-67195242 2.24e-01 80 chr6:31739252-31739332 9.50e-02 20_[+1(7.26e-05)]_52 chr11:3465744-3465824 3.43e-05 7_[+5(1.42e-05)]_28_[+1(3.38e-05)]_\ 29 chr6:16225716-16225796 5.24e-01 80 chr3:72328037-72328117 6.51e-02 36_[+1(3.38e-05)]_36 chr16:21565033-21565113 1.81e-03 18_[+5(1.42e-05)]_54 chr3:14876478-14876558 2.09e-04 8_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 19_[+4(4.88e-05)]_19 chr16:84647151-84647231 7.32e-02 57_[+4(4.88e-05)]_15 chr19:4344125-4344205 1.43e-03 22_[+2(6.07e-05)]_50 chr11:61101302-61101382 2.24e-04 16_[+4(1.21e-05)]_8_[+1(7.26e-05)]_\ 40 chr1:12611760-12611840 6.68e-02 80 chr1:16474212-16474292 6.16e-03 27_[+4(1.21e-05)]_45 chr5:125874410-125874490 1.71e-05 27_[+5(1.42e-05)]_30_[+1(3.38e-05)]_\ 7 chr1:954589-954669 2.81e-02 80 chr1:26371084-26371164 2.69e-04 24_[+5(4.55e-05)]_48 chr19:17358122-17358202 9.18e-01 80 chr19:6460014-6460094 7.91e-03 1_[+1(3.38e-05)]_71 chr1:20943748-20943828 2.72e-04 36_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 18 chr10:74071525-74071605 2.89e-05 16_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 47 chr7:116652443-116652523 1.22e-03 55_[+2(1.46e-05)]_17 chr1:11801709-11801789 1.01e-06 1_[+5(4.55e-05)]_27_[+1(3.38e-05)]_\ 10_[+2(1.46e-05)]_18 chr7:32539518-32539598 5.97e-02 80 chr1:39280974-39281054 1.24e-05 32_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 22 chr19:38738746-38738826 9.30e-06 21_[+3(3.18e-05)]_7_[+1(7.26e-05)]_\ 36 chr17:73509554-73509634 4.83e-02 29_[+4(1.21e-05)]_43 chr19:5170476-5170556 2.72e-01 80 chr16:85359898-85359978 5.47e-05 45_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 18 chr10:52078069-52078149 1.48e-02 28_[+1(3.38e-05)]_44 chr19:50368262-50368342 5.57e-02 80 chr16:85599586-85599666 1.18e-05 2_[+5(1.42e-05)]_39_[+3(3.18e-05)]_\ 23 chr14:78389653-78389733 1.84e-01 80 chr17:46322969-46323049 6.41e-04 14_[+5(1.42e-05)]_58 chr18:48368496-48368576 5.78e-02 80 chr7:30189642-30189722 8.51e-05 30_[+5(1.42e-05)]_42 chr19:8213269-8213349 3.04e-02 80 chr19:4056031-4056111 5.58e-02 80 chr20:45317287-45317367 1.22e-01 80 chr12:54891139-54891219 3.41e-01 80 chr17:46605739-46605819 4.20e-03 80 chr19:3052235-3052315 3.07e-04 25_[+5(1.42e-05)]_47 chr4:3551937-3552017 1.44e-06 15_[+1(3.38e-05)]_1_[+3(3.18e-05)]_\ 48 chr12:54753719-54753799 2.12e-01 80 chr19:3398121-3398201 8.72e-03 54_[+1(3.38e-05)]_18 chr12:117038898-11703897 1.25e-05 37_[+1(3.38e-05)]_10_[+2(8.76e-05)]_\ 17 chr11:33957780-33957860 6.42e-03 55_[+2(1.46e-05)]_17 chr19:38928095-38928175 1.13e-05 42_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 21 chr19:17726828-17726908 1.37e-04 4_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 50 chr1:16509264-16509344 9.51e-04 17_[+5(4.55e-05)]_55 chr6:158403776-158403856 3.97e-04 30_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 24 chr7:148683577-148683657 3.79e-01 80 chr16:14380399-14380479 3.32e-05 45_[+3(6.20e-05)]_1_[+2(1.46e-05)]_\ 18 chr7:76048290-76048370 1.16e-02 80 chr9:115079480-115079560 3.36e-01 80 chr19:4599465-4599545 4.12e-04 34_[+1(3.38e-05)]_1_[+3(3.18e-05)]_\ 29 chr19:14144883-14144963 4.22e-03 27_[+5(1.42e-05)]_45 chr19:45799287-45799367 1.79e-04 29_[+4(1.21e-05)]_43 chr16:4396636-4396716 1.16e-03 18_[+5(1.42e-05)]_54 chr21:33893218-33893298 4.88e-06 20_[+3(9.58e-05)]_3_[+1(3.38e-05)]_\ 1_[+3(3.18e-05)]_1_[+2(1.46e-05)]_23 chr19:13510730-13510810 8.15e-03 69_[+3(3.18e-05)]_3 chr7:73923949-73924029 9.58e-01 80 chr22:21100032-21100112 1.51e-03 8_[+3(3.18e-05)]_64 chr10:72425731-72425811 1.08e-04 [+5(8.30e-05)]_29_[+1(3.38e-05)]_1_\ [+3(6.20e-05)]_26 chr9:135820765-135820845 5.70e-06 38_[+1(3.38e-05)]_4_[+5(4.55e-05)]_\ 22 chr19:48845165-48845245 3.43e-04 43_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 11 chr11:75255072-75255152 5.78e-03 72_[+2(1.46e-05)] chr19:3720084-3720164 1.12e-04 30_[+2(6.07e-05)]_3_[+4(1.21e-05)]_\ 31 chr20:35489717-35489797 4.64e-02 80 chr6:31621666-31621746 1.82e-01 80 chr20:32503542-32503622 1.47e-01 80 chr6:3397689-3397769 4.24e-05 39_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 15 chr9:126079641-126079721 2.54e-03 23_[+4(1.21e-05)]_49 chr9:132178053-132178133 4.27e-05 33_[+3(3.18e-05)]_1_[+2(8.76e-05)]_\ 30 chr2:10611251-10611331 7.38e-02 3_[+2(1.46e-05)]_69 chr19:45506906-45506986 1.25e-04 23_[+1(3.38e-05)]_2_[+3(3.18e-05)]_\ 39 chr10:80807478-80807558 4.28e-02 31_[+4(1.21e-05)]_41 chr18:47808372-47808452 3.47e-03 14_[+5(8.30e-05)]_40_[+2(6.07e-05)]_\ 10 chr1:211784256-211784336 1.51e-01 80 chr15:90605027-90605107 5.89e-03 21_[+1(7.26e-05)]_51 chr22:20007656-20007736 1.56e-02 80 chr1:21962704-21962784 2.79e-02 39_[+5(1.42e-05)]_33 chr1:224031727-224031807 1.43e-03 17_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 37 chr11:64528408-64528488 7.99e-03 28_[+5(1.42e-05)]_44 chr6:16056823-16056903 2.69e-05 45_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 9 chr7:73029436-73029516 8.64e-02 26_[+4(1.21e-05)]_46 chr20:52353683-52353763 5.60e-01 80 chr1:12118549-12118629 9.77e-04 25_[+5(1.42e-05)]_47 chr16:29041131-29041211 9.62e-01 80 chr16:4375346-4375426 1.63e-02 13_[+2(1.46e-05)]_59 chr3:5101177-5101257 4.24e-04 21_[+5(1.42e-05)]_51 chr1:12599798-12599878 4.51e-01 80 chr1:26865119-26865199 2.49e-04 17_[+1(7.26e-05)]_55 chr11:65254224-65254304 2.40e-05 37_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 26 chr19:35797407-35797487 2.70e-02 80 chr19:4578695-4578775 1.88e-01 80 chr1:31359711-31359791 2.21e-04 9_[+4(7.50e-05)]_12_[+4(1.21e-05)]_\ 43 chr4:81049335-81049415 1.97e-04 47_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 7 chr19:13030521-13030601 3.77e-02 80 chr19:3471981-3472061 2.13e-02 80 chr12:122370198-12237027 2.60e-02 25_[+2(6.07e-05)]_47 chr19:55679109-55679189 6.19e-05 53_[+5(4.55e-05)]_19 chr5:134493519-134493599 4.77e-02 80 chr6:159072104-159072184 2.17e-03 52_[+3(3.18e-05)]_20 chr22:26880257-26880337 4.36e-06 45_[+1(3.38e-05)]_1_[+3(3.18e-05)]_\ 18 chr5:145214252-145214332 1.00e-03 4_[+1(7.26e-05)]_68 chr11:2951253-2951333 2.97e-02 80 chr5:176790721-176790801 2.59e-03 16_[+2(6.07e-05)]_3_[+4(1.21e-05)]_\ 45 chr22:22405676-22405756 1.28e-01 80 chr11:117973054-11797313 9.01e-04 37_[+2(6.07e-05)]_35 chr9:132334073-132334153 1.15e-04 19_[+3(6.20e-05)]_12_[+3(3.18e-05)]_\ 1_[+2(1.46e-05)]_24 chr12:114077432-11407751 6.81e-04 35_[+4(7.50e-05)]_37 chr1:17536156-17536236 1.40e-01 80 chr15:68520984-68521064 4.06e-02 80 chr19:18113281-18113361 7.78e-02 80 chr1:26404157-26404237 1.17e-04 2_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 52 chr5:172192932-172193012 1.23e-05 4_[+5(9.65e-05)]_45_[+1(3.38e-05)]_\ 15 chr1:53095535-53095615 1.34e-05 25_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 29 chr20:48688196-48688276 8.86e-02 57_[+4(1.21e-05)]_15 chr6:43902523-43902603 1.97e-03 32_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 22 chr16:16684936-16685016 1.42e-03 55_[+3(6.20e-05)]_3_[+1(3.38e-05)]_\ 6 chr22:46664277-46664357 2.68e-04 19_[+1(7.26e-05)]_21_[+4(2.29e-05)]_\ 24 chr12:31000326-31000406 8.94e-01 80 chr19:8306706-8306786 1.57e-04 28_[+1(7.26e-05)]_1_[+4(7.50e-05)]_\ 35 chr1:22228977-22229057 7.21e-03 25_[+4(1.21e-05)]_47 chr10:21455561-21455641 1.21e-02 80 chr1:22234354-22234434 2.98e-03 80 chr12:123867387-12386746 1.38e-04 23_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 40 chr7:2670861-2670941 1.31e-01 80 chr22:39695921-39696001 7.36e-03 80 chr1:180472788-180472868 3.17e-02 80 chr15:55611916-55611996 2.55e-04 45_[+2(1.46e-05)]_27 chr19:1247841-1247921 2.12e-05 5_[+1(3.38e-05)]_10_[+2(1.46e-05)]_\ 49 chr5:131809045-131809125 4.50e-04 5_[+4(9.07e-05)]_15_[+1(7.26e-05)]_\ 10_[+2(6.07e-05)]_26 chr7:2353246-2353326 7.04e-01 80 chr10:45933757-45933837 3.92e-06 7_[+5(1.42e-05)]_29_[+1(3.38e-05)]_\ 10_[+2(1.46e-05)]_10 chr20:56024174-56024254 7.77e-03 80 chr1:153520631-153520711 8.23e-06 2_[+1(7.26e-05)]_70 chr1:31228356-31228436 5.18e-01 80 chr12:54610223-54610303 3.60e-01 80 chr6:37605486-37605566 4.56e-06 1_[+1(3.38e-05)]_1_[+3(3.18e-05)]_1_\ [+2(1.46e-05)]_53 chr19:10526472-10526552 3.35e-01 80 chr19:3321010-3321090 2.05e-01 80 chr5:173204781-173204861 1.18e-03 25_[+2(6.07e-05)]_47 chr19:1310113-1310193 3.06e-01 80 chr19:14083288-14083368 3.85e-02 80 chr10:49697300-49697380 2.85e-03 58_[+4(3.66e-05)]_14 chr15:78024434-78024514 1.26e-03 80 chr1:12209137-12209217 3.78e-04 27_[+1(7.26e-05)]_1_[+4(7.50e-05)]_\ 1_[+2(6.07e-05)]_27 chr12:113862874-11386295 1.15e-03 21_[+1(7.26e-05)]_19_[+4(1.21e-05)]_\ 24 chr1:24235100-24235180 2.13e-04 51_[+2(8.76e-05)]_21 chr19:40921868-40921948 2.49e-01 80 chr1:16421440-16421520 1.02e-03 9_[+1(3.38e-05)]_63 chr19:47847857-47847937 5.50e-01 80 chr1:21969395-21969475 7.86e-02 80 chr19:45822516-45822596 3.92e-01 80 chr12:116822120-11682220 2.76e-03 15_[+1(7.26e-05)]_1_[+4(6.27e-05)]_\ 48 chr6:6862397-6862477 4.95e-05 6_[+2(4.50e-05)]_10_[+3(3.18e-05)]_\ 48 chr1:16471300-16471380 4.88e-06 34_[+1(3.38e-05)]_1_[+3(3.18e-05)]_\ 1_[+2(1.46e-05)]_20 chr17:72927793-72927873 2.94e-01 80 chr11:75189853-75189933 3.82e-04 52_[+2(6.07e-05)]_20 chr16:70472273-70472353 1.10e-03 31_[+1(3.38e-05)]_41 chr19:40909315-40909395 2.21e-03 56_[+2(6.07e-05)]_16 chr19:3362660-3362740 4.88e-06 [+3(9.58e-05)]_39_[+1(3.38e-05)]_\ [+3(3.18e-05)]_1_[+2(1.46e-05)]_8 chr11:74808400-74808480 2.20e-03 80 chr22:37669758-37669838 1.05e-04 27_[+1(3.38e-05)]_10_[+2(8.76e-05)]_\ 27 chr1:39676500-39676580 9.15e-05 27_[+3(3.18e-05)]_1_[+2(1.46e-05)]_\ 36 chr1:15750029-15750109 3.84e-04 27_[+5(1.42e-05)]_45 chr16:4992245-4992325 1.51e-05 30_[+1(3.38e-05)]_2_[+3(3.18e-05)]_\ 32 chr10:99167597-99167677 2.91e-04 16_[+5(4.55e-05)]_32_[+1(3.38e-05)]_\ 16 chr19:17716074-17716154 9.26e-06 20_[+1(3.38e-05)]_10_[+2(8.76e-05)]_\ 34 chr16:16081149-16081229 3.06e-04 9_[+1(7.26e-05)]_10_[+2(6.07e-05)]_\ 45 chr1:171614018-171614098 1.23e-01 80 chr1:155036910-155036990 1.67e-02 80 chr6:37016135-37016215 1.23e-01 5_[+2(6.07e-05)]_67 chr19:703454-703534 2.10e-02 80 chr17:17655995-17656075 8.37e-01 80 chr6:138131776-138131856 6.91e-04 20_[+1(7.26e-05)]_52 chr1:31376683-31376763 1.35e-03 35_[+5(1.42e-05)]_37 chr19:46088478-46088558 7.65e-04 19_[+5(4.55e-05)]_53 chr17:21199896-21199976 6.11e-03 80 chr1:17249423-17249503 6.54e-04 5_[+1(7.26e-05)]_67 chr19:10728281-10728361 2.44e-01 80 chr19:18215669-18215749 8.39e-01 80 chr17:75117763-75117843 3.64e-04 19_[+1(7.26e-05)]_53 chr16:11297332-11297412 1.54e-02 22_[+4(1.21e-05)]_50 chr1:11840621-11840701 1.41e-04 38_[+2(1.46e-05)]_34 chr9:137216318-137216398 3.11e-04 52_[+2(6.07e-05)]_20 chr19:10534164-10534244 2.64e-02 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n08.farnam.hpc.yale.internal ********************************************************************************