******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ATF7.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3:14430869-14430949 1.0000 80 chr21:43099267-43099347 1.0000 80 chr8:41862935-41863015 1.0000 80 chr12:56224442-56224522 1.0000 80 chr14:68086439-68086519 1.0000 80 chr10:111981684-11198176 1.0000 80 chr4:75375236-75375316 1.0000 80 chr21:46001993-46002073 1.0000 80 chr1:15433174-15433254 1.0000 80 chr1:155830410-155830490 1.0000 80 chr19:51506073-51506153 1.0000 80 chr12:124675621-12467570 1.0000 80 chr2:179107138-179107218 1.0000 80 chr1:1624234-1624314 1.0000 80 chr12:110481112-11048119 1.0000 80 chrX:54666190-54666270 1.0000 80 chrX:152419847-152419927 1.0000 80 chr3:107941305-107941385 1.0000 80 chr17:53573915-53573995 1.0000 80 chr8:17013352-17013432 1.0000 80 chr6:83073355-83073435 1.0000 80 chr15:45748907-45748987 1.0000 80 chr7:104909617-104909697 1.0000 80 chrX:43513975-43514055 1.0000 80 chr19:50268843-50268923 1.0000 80 chr10:43474927-43475007 1.0000 80 chr12:122098053-12209813 1.0000 80 chr11:9286969-9287049 1.0000 80 chr7:44152353-44152433 1.0000 80 chr19:46503103-46503183 1.0000 80 chrX:48397740-48397820 1.0000 80 chr6:18035122-18035202 1.0000 80 chr6:149492288-149492368 1.0000 80 chr19:41104212-41104292 1.0000 80 chr7:5492773-5492853 1.0000 80 chr1:43510614-43510694 1.0000 80 chr14:93821385-93821465 1.0000 80 chr10:99078869-99078949 1.0000 80 chr17:74537082-74537162 1.0000 80 chr19:996501-996581 1.0000 80 chr11:129872266-12987234 1.0000 80 chr17:7835439-7835519 1.0000 80 chr14:91294528-91294608 1.0000 80 chr3:48701506-48701586 1.0000 80 chr10:71992303-71992383 1.0000 80 chr9:71788931-71789011 1.0000 80 chr1:43609282-43609362 1.0000 80 chr1:28099514-28099594 1.0000 80 chr8:23409026-23409106 1.0000 80 chr3:160473048-160473128 1.0000 80 chr16:11222763-11222843 1.0000 80 chr1:39624463-39624543 1.0000 80 chr14:52118250-52118330 1.0000 80 chr3:177766662-177766742 1.0000 80 chr14:39901484-39901564 1.0000 80 chr3:72201904-72201984 1.0000 80 chr15:100243964-10024404 1.0000 80 chr16:4511388-4511468 1.0000 80 chrX:39612780-39612860 1.0000 80 chr22:39097051-39097131 1.0000 80 chr18:77866838-77866918 1.0000 80 chr19:7829134-7829214 1.0000 80 chr11:72525220-72525300 1.0000 80 chr7:2393976-2394056 1.0000 80 chr9:135285403-135285483 1.0000 80 chr7:66691478-66691558 1.0000 80 chr17:31082197-31082277 1.0000 80 chrX:47880858-47880938 1.0000 80 chr19:47617025-47617105 1.0000 80 chr2:86947251-86947331 1.0000 80 chr11:125933025-12593310 1.0000 80 chr2:44314514-44314594 1.0000 80 chr5:89854406-89854486 1.0000 80 chr18:497080-497160 1.0000 80 chr3:50359010-50359090 1.0000 80 chr12:64616314-64616394 1.0000 80 chr7:116660192-116660272 1.0000 80 chr12:56440975-56441055 1.0000 80 chr16:70099992-70100072 1.0000 80 chr19:2962176-2962256 1.0000 80 chr5:141150735-141150815 1.0000 80 chr15:72766082-72766162 1.0000 80 chr1:208525264-208525344 1.0000 80 chr14:90920806-90920886 1.0000 80 chr14:57046352-57046432 1.0000 80 chr19:17666298-17666378 1.0000 80 chr11:1593556-1593636 1.0000 80 chr18:72163387-72163467 1.0000 80 chrX:47077906-47077986 1.0000 80 chr8:107669895-107669975 1.0000 80 chr11:1585908-1585988 1.0000 80 chr1:183573552-183573632 1.0000 80 chr1:1677699-1677779 1.0000 80 chr1:154909555-154909635 1.0000 80 chr6:110501015-110501095 1.0000 80 chr19:49078095-49078175 1.0000 80 chr13:76112093-76112173 1.0000 80 chr11:77185395-77185475 1.0000 80 chr14:60715689-60715769 1.0000 80 chr2:9310987-9311067 1.0000 80 chr9:100395097-100395177 1.0000 80 chr12:7013852-7013932 1.0000 80 chr1:201140724-201140804 1.0000 80 chr3:15965295-15965375 1.0000 80 chr6:136647264-136647344 1.0000 80 chr6:43777230-43777310 1.0000 80 chr11:95440200-95440280 1.0000 80 chr10:70716919-70716999 1.0000 80 chr1:200860482-200860562 1.0000 80 chr9:15511073-15511153 1.0000 80 chr13:76123716-76123796 1.0000 80 chr1:84464927-84465007 1.0000 80 chr4:13486106-13486186 1.0000 80 chr21:18983988-18984068 1.0000 80 chr22:32340286-32340366 1.0000 80 chr21:45437668-45437748 1.0000 80 chr7:139900169-139900249 1.0000 80 chr19:42772521-42772601 1.0000 80 chr2:88899771-88899851 1.0000 80 chr7:120625356-120625436 1.0000 80 chr22:39052490-39052570 1.0000 80 chr17:43229446-43229526 1.0000 80 chr17:76554586-76554666 1.0000 80 chr16:15068684-15068764 1.0000 80 chr3:156530480-156530560 1.0000 80 chr5:14264879-14264959 1.0000 80 chr10:99094568-99094648 1.0000 80 chr2:120301848-120301928 1.0000 80 chr5:173345043-173345123 1.0000 80 chrX:118827263-118827343 1.0000 80 chr18:43996813-43996893 1.0000 80 chr3:182727679-182727759 1.0000 80 chr8:50042502-50042582 1.0000 80 chr19:49939681-49939761 1.0000 80 chrX:133941134-133941214 1.0000 80 chr9:130538761-130538841 1.0000 80 chr6:41735044-41735124 1.0000 80 chr6:139456064-139456144 1.0000 80 chr11:108535537-10853561 1.0000 80 chr17:43306517-43306597 1.0000 80 chr12:122028222-12202830 1.0000 80 chr1:11539015-11539095 1.0000 80 chr4:185760132-185760212 1.0000 80 chr14:45603548-45603628 1.0000 80 chr9:86323809-86323889 1.0000 80 chr12:56521667-56521747 1.0000 80 chr6:27832916-27832996 1.0000 80 chr22:18540548-18540628 1.0000 80 chr17:7589701-7589781 1.0000 80 chr1:22380077-22380157 1.0000 80 chr6:43538920-43539000 1.0000 80 chr1:150602115-150602195 1.0000 80 chr16:57770811-57770891 1.0000 80 chr7:2595224-2595304 1.0000 80 chr19:49164460-49164540 1.0000 80 chr1:6052172-6052252 1.0000 80 chr7:154794935-154795015 1.0000 80 chr5:179453517-179453597 1.0000 80 chr5:175964846-175964926 1.0000 80 chr19:55574651-55574731 1.0000 80 chr12:25104836-25104916 1.0000 80 chrX:19002612-19002692 1.0000 80 chr9:100709505-100709585 1.0000 80 chr3:150089743-150089823 1.0000 80 chr14:39736406-39736486 1.0000 80 chr5:150326204-150326284 1.0000 80 chr4:42659367-42659447 1.0000 80 chr20:32581532-32581612 1.0000 80 chr17:17140615-17140695 1.0000 80 chr19:49653725-49653805 1.0000 80 chr8:107282274-107282354 1.0000 80 chr11:12695821-12695901 1.0000 80 chr1:1935264-1935344 1.0000 80 chr22:42228706-42228786 1.0000 80 chr14:75348502-75348582 1.0000 80 chr11:65189685-65189765 1.0000 80 chr8:1706667-1706747 1.0000 80 chr7:99104176-99104256 1.0000 80 chrX:53024924-53025004 1.0000 80 chr12:106696388-10669646 1.0000 80 chr17:13319499-13319579 1.0000 80 chr1:155658697-155658777 1.0000 80 chr19:17792468-17792548 1.0000 80 chr3:195782810-195782890 1.0000 80 chr12:100660873-10066095 1.0000 80 chr14:50053197-50053277 1.0000 80 chr5:64331581-64331661 1.0000 80 chr2:206767295-206767375 1.0000 80 chr2:87303607-87303687 1.0000 80 chr10:112201576-11220165 1.0000 80 chr16:87989996-87990076 1.0000 80 chr19:6737389-6737469 1.0000 80 chr20:354245-354325 1.0000 80 chr22:38910708-38910788 1.0000 80 chr1:1790228-1790308 1.0000 80 chr9:133327652-133327732 1.0000 80 chr10:16993231-16993311 1.0000 80 chr19:50179822-50179902 1.0000 80 chr20:42219400-42219480 1.0000 80 chr17:29421806-29421886 1.0000 80 chr19:42806716-42806796 1.0000 80 chr21:19191802-19191882 1.0000 80 chr1:19229157-19229237 1.0000 80 chr15:71544678-71544758 1.0000 80 chr18:2875662-2875742 1.0000 80 chr1:113361851-113361931 1.0000 80 chr10:97026584-97026664 1.0000 80 chr1:2144062-2144142 1.0000 80 chrX:155111413-155111493 1.0000 80 chrX:47420758-47420838 1.0000 80 chr16:89766704-89766784 1.0000 80 chr7:135595449-135595529 1.0000 80 chr20:2082944-2083024 1.0000 80 chr3:99721801-99721881 1.0000 80 chr6:150255535-150255615 1.0000 80 chrX:54070928-54071008 1.0000 80 chr3:186314813-186314893 1.0000 80 chr19:42901111-42901191 1.0000 80 chr11:45921466-45921546 1.0000 80 chr12:117257339-11725741 1.0000 80 chrX:118824911-118824991 1.0000 80 chr19:45970908-45970988 1.0000 80 chr3:48514492-48514572 1.0000 80 chr11:46907944-46908024 1.0000 80 chrX:47479302-47479382 1.0000 80 chr15:85458329-85458409 1.0000 80 chr14:21944621-21944701 1.0000 80 chr10:127511947-12751202 1.0000 80 chr20:814332-814412 1.0000 80 chr2:74781531-74781611 1.0000 80 chr6:26924043-26924123 1.0000 80 chr7:21985624-21985704 1.0000 80 chr1:53168746-53168826 1.0000 80 chr18:76829114-76829194 1.0000 80 chr19:55678302-55678382 1.0000 80 chr16:57096458-57096538 1.0000 80 chr19:16187139-16187219 1.0000 80 chr19:50979544-50979624 1.0000 80 chr11:129872554-12987263 1.0000 80 chr7:127484890-127484970 1.0000 80 chr6:3177116-3177196 1.0000 80 chr11:85913829-85913909 1.0000 80 chr8:38644587-38644667 1.0000 80 chr16:27561308-27561388 1.0000 80 chr2:152475974-152476054 1.0000 80 chr19:48281744-48281824 1.0000 80 chr8:130704710-130704790 1.0000 80 chrX:48858772-48858852 1.0000 80 chr11:61717168-61717248 1.0000 80 chr3:52321993-52322073 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ATF7/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ATF7.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.224 C 0.272 G 0.278 T 0.227 Background letter frequencies (from file dataset with add-one prior applied): A 0.224 C 0.272 G 0.278 T 0.227 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TGACGTCA MEME-1 width = 8 sites = 153 llr = 1488 E-value = 1.4e-268 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a:1:1a pos.-specific C :::9::9: probability G :9::9::: matrix T a1:1:a:: bits 2.2 * * * * 1.9 * * * * 1.7 * * * * 1.5 *** *** Relative 1.3 ******** Entropy 1.1 ******** (14.0 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TGACGTCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr3:52321993-52322073 48 1.48e-05 TACCTTAGGA TGACGTCA CTTCCGGCCC chr16:27561308-27561388 47 1.48e-05 CGCGCCGGCA TGACGTCA CTCCCCGGGG chr19:50979544-50979624 14 1.48e-05 GCGGGCTTTA TGACGTCA CACAAGAGCG chr18:76829114-76829194 26 1.48e-05 TAGCCACTCG TGACGTCA TTGCCCGGAC chr2:74781531-74781611 29 1.48e-05 GCTTTCACTC TGACGTCA CCTTGGGCAT chr3:48514492-48514572 54 1.48e-05 CTCCTCCAGA TGACGTCA GCCACAGGAA chr19:45970908-45970988 21 1.48e-05 GGATTCCCTC TGACGTCA TTGCTAGGAT chrX:118824911-118824991 26 1.48e-05 GCATGGAGAG TGACGTCA GTTTTCCCAG chr19:42901111-42901191 17 1.48e-05 AAGCTATCCA TGACGTCA GTCACTATCT chrX:54070928-54071008 24 1.48e-05 GGCTCCCGGG TGACGTCA TCGGGGGGGC chr7:135595449-135595529 46 1.48e-05 ACAATAAAAA TGACGTCA TTAGAAACTT chr16:89766704-89766784 47 1.48e-05 ACGTGCCCAG TGACGTCA TCGGCTTCCT chrX:155111413-155111493 51 1.48e-05 CCTTGTTCGA TGACGTCA CTTTCTGCTT chr17:29421806-29421886 23 1.48e-05 AGGAGTTAGA TGACGTCA CCTCCAGGAG chr9:133327652-133327732 50 1.48e-05 AACAAGGCTA TGACGTCA TTGCCTATCT chr1:1790228-1790308 26 1.48e-05 cccttcccga tgacgtca catcctaata chr22:38910708-38910788 50 1.48e-05 acaaatgcca tgacgtca ggaagttatc chr5:64331581-64331661 50 1.48e-05 TTCCTTAGGG TGACGTCA TCTCTGCTCA chr14:50053197-50053277 50 1.48e-05 GCCCAGTTGA TGACGTCA CCATACCACA chr12:100660873-10066095 51 1.48e-05 CGGCAGGAAG TGACGTCA TGCCCCCGGC chr19:17792468-17792548 29 1.48e-05 acggaaggaa tGACGTCA CCTCCTCCAT chr8:1706667-1706747 27 1.48e-05 gccacctcca tgacgtca tttcagttct chr11:65189685-65189765 40 1.48e-05 GCCCGGGCGC TGACGTCA TCGGCCGAGC chr11:12695821-12695901 27 1.48e-05 CGATTCCCCA TGACGTCA CCGGCGGCGG chr19:55574651-55574731 48 1.48e-05 TTTGTTCGAA TGACGTCA CACTTGCCGC chr5:175964846-175964926 24 1.48e-05 TTCCCGGAGA TGACGTCA CCCCCAAGAG chr5:179453517-179453597 23 1.48e-05 TTCCTGTCAA TGACGTCA TGGACAGGGC chr19:49164460-49164540 52 1.48e-05 TAGCACCCAA TGACGTCA TAAGAGCGTT chr16:57770811-57770891 52 1.48e-05 TTTTCTAACA TGACGTCA CCTCTTGTTT chr22:18540548-18540628 49 1.48e-05 TCAAGGCCCA Tgacgtca tcctctcact chr6:27832916-27832996 26 1.48e-05 CGATTCTAGA TGACGTCA TATACACGTT chr12:56521667-56521747 22 1.48e-05 CAGCTCTGCA TGACGTCA TACCACAGGC chr9:86323809-86323889 49 1.48e-05 TAATTTGAAA TGACGTCA TTGGCTTTTA chr4:185760132-185760212 49 1.48e-05 aatatctaca tgacgtca tggaggggcc chr11:108535537-10853561 20 1.48e-05 GGTCAGTGTA TGACGTCA CCATAGTAAC chr6:139456064-139456144 13 1.48e-05 GACGCCTGGA TGACGTCA CTCGAGGTGG chrX:133941134-133941214 26 1.48e-05 GCGCCTGAAG TGACGTCA TTGCCTGCAT chr19:49939681-49939761 53 1.48e-05 TGGGTGAGTG TGACGTCA TGGGGGCGTA chr3:182727679-182727759 39 1.48e-05 ATACAGAGAA TGACGTCA GCCATTCTTA chr5:14264879-14264959 32 1.48e-05 CCGGAGAGGG TGACGTCA CCTCCCTCTG chr17:43229446-43229526 51 1.48e-05 TCTTCTGCTA TGACGTCA TGCAGCAGCC chr7:120625356-120625436 51 1.48e-05 ACTTAATCCA TGACGTCA CTGCTAGTAA chr7:139900169-139900249 47 1.48e-05 GCTGAATGGG TGACGTCA TTCATTCACG chr22:32340286-32340366 66 1.48e-05 TTATAGTAGG TGACGTCA CCTTGAA chr21:18983988-18984068 25 1.48e-05 TATCGCACGG TGACGTCA TCCTGGGACC chr6:43777230-43777310 26 1.48e-05 tttatctgga tgacgtca cccaccaggc chr6:136647264-136647344 49 1.48e-05 GGGTGAGTGA TGACGTCA TTATCAAGAG chr3:15965295-15965375 41 1.48e-05 TTGAGTTCAA TGACGTCA TGCCATTGAT chr1:201140724-201140804 46 1.48e-05 ccctagatca tgacgtca ccctggacct chr9:100395097-100395177 23 1.48e-05 ggccgacgga tgacgtca tttactgaaa chr14:60715689-60715769 61 1.48e-05 GGTAAGGCAG TGACGTCA TCTGTGGCGG chr11:77185395-77185475 52 1.48e-05 GCTTGCTGCG TGACGTCA TCGCGTCGCG chr1:183573552-183573632 27 1.48e-05 AAGACCATGA TGACGTCA TGGCCGAGCT chr11:1585908-1585988 11 1.48e-05 CTGGGCTGGG TGACGTCA CCGGCAGCCA chr18:72163387-72163467 25 1.48e-05 CTGGGAGAGG TGACGTCA CCTTCCGCAC chr11:1593556-1593636 12 1.48e-05 AAAAAGCCCC TGACGTCA CCTGCAGCCA chr19:17666298-17666378 51 1.48e-05 GGGCTGCAGG TGACGTCA CTCCGGGCCT chr15:72766082-72766162 23 1.48e-05 CTCTTTAAAA TGACGTCA TTATAGGAGA chr5:141150735-141150815 33 1.48e-05 ATAAAAGGAA TGACGTCA TCCTTGTGCT chr19:2962176-2962256 23 1.48e-05 tttaaatgta tgacgtca tcttatgtaa chr7:116660192-116660272 45 1.48e-05 GCAGTGTCCC TGACGTCA TCCAGCGTAT chr12:64616314-64616394 68 1.48e-05 CATGCAAACG TGACGTCA GCCCT chr2:44314514-44314594 24 1.48e-05 CCCAGTCCGC TGACGTCA CCTTGTTTAC chr19:47617025-47617105 23 1.48e-05 AGCCCGGAGG TGACGTCA CTCGACAACC chr18:77866838-77866918 51 1.48e-05 ACCCCTTTAG TGACGTCA TTGCCCACTC chr22:39097051-39097131 22 1.48e-05 GACGTAAGTC TGACGTCA TCGGCACCGG chrX:39612780-39612860 54 1.48e-05 GGAAAGGAGG TGACGTCA TCAGATTGCC chr1:39624463-39624543 26 1.48e-05 GCTTCTCTGG TGACGTCA CTTGTAAATG chr8:23409026-23409106 23 1.48e-05 TTGGTAAAAA TGACGTCA TTGCTAAGAA chr1:28099514-28099594 22 1.48e-05 CCCAACTAGG TGACGTCA TCTCCCCGCC chr10:71992303-71992383 50 1.48e-05 GTTTCCAGAC TGACGTCA TCTGTTTGAT chr17:7835439-7835519 51 1.48e-05 CGCGGGCGGG TGACGTCA TCGAGGCGAG chr19:996501-996581 49 1.48e-05 GAAACAGTGG TGACGTCA TCGTTCAGAC chr14:93821385-93821465 48 1.48e-05 gggagtgcaa tgacgtca tcttgactca chr1:43510614-43510694 26 1.48e-05 atgacaccca tgacgtca tgctgaccag chr7:5492773-5492853 52 1.48e-05 CAGCATGTGA TGACGTCA CTGTCACCCC chr6:149492288-149492368 52 1.48e-05 CCCTAGGAGG TGACGTCA TTACCGTGAG chr6:18035122-18035202 25 1.48e-05 agctgcaaca tgacgtca ttgagcacaa chrX:48397740-48397820 50 1.48e-05 GGTGTGGGCC TGACGTCA TCACGCAGCC chr19:46503103-46503183 45 1.48e-05 GATGGGGTGG TGACGTCA TGGGTTGGTG chr12:122098053-12209813 64 1.48e-05 tgagccgaga tgacgtca ttgcactcc chr10:43474927-43475007 23 1.48e-05 GCCAGCAACA TGACGTCA TAGTTCCTGG chr15:45748907-45748987 23 1.48e-05 ACAGCAGTGA TGACGTCA TTCACCACAT chr3:107941305-107941385 40 1.48e-05 CTTTCCTGAA TGACGTCA CCTGTGGCCC chr2:179107138-179107218 49 1.48e-05 CAGATGTGGA TGACGTCA TCTTTGTATT chr19:51506073-51506153 51 1.48e-05 TGGCTGTCGG TGACGTCA TAGAGACGGG chr1:15433174-15433254 24 1.48e-05 GGTCCCAATA TGACGTCA TCTCTAGTCT chr21:46001993-46002073 22 1.48e-05 AAGGCTAGGA TGACGTCA TATCAGCGGG chr14:68086439-68086519 26 1.48e-05 CAGAGTGGGG TGACGTCA TCGAAGGCAC chr21:43099267-43099347 51 1.48e-05 gccctgcaag tgacgtca tgcccttccg chr3:14430869-14430949 41 1.48e-05 caagttaaga tgacgtca ttagggtggg chr8:130704710-130704790 24 2.67e-05 GGCTCCTCCA TGACATCA TCCATTCCTT chr11:46907944-46908024 57 2.67e-05 GCCAGTGGGA TGACATCA TCAGACAGGT chr6:150255535-150255615 34 2.67e-05 GAGACAATTG TGACATCA TGGTGGATGA chr10:16993231-16993311 36 2.67e-05 TGGCTAAGGA TGACATCA TCGGCTGCCA chr16:87989996-87990076 23 2.67e-05 GGTGAAAGCA TGACATCA TCTGACTTGG chr6:43538920-43539000 50 2.67e-05 AGAGCTAGGA TGACATCA TTATTCTTTA chr17:76554586-76554666 32 2.67e-05 CATGGGTGGA TGACATCA TCATTGCATG chr2:88899771-88899851 34 2.67e-05 GGTACAGAGA TGACATCA CCCTTCACAA chr11:95440200-95440280 24 2.67e-05 GGGAAGCAGA TGACATCA TTTTTTATGC chr2:9310987-9311067 51 2.67e-05 ctcctgggaa tgacatca ctgttgtaaa chr19:49078095-49078175 27 2.67e-05 TGGTAACCGA TGACATCA TCACTAATTC chr17:31082197-31082277 26 2.67e-05 TGGTTACAAA TGACATCA TGCTTTCTAA chr3:177766662-177766742 27 2.67e-05 aactcaaaga tgacatca ttcttttctc chr3:48701506-48701586 65 2.67e-05 ACGGTCCCTA TGACATCA CCATCAAC chr17:74537082-74537162 23 2.67e-05 GGGAGGAGCA TGACATCA TCAGCATAGA chr12:110481112-11048119 45 2.67e-05 ggcaaaggaa tgacatca tctgatttag chr11:61717168-61717248 27 3.90e-05 GAATAACGTA TGATGTCA CCAGCAGCCA chr2:152475974-152476054 26 3.90e-05 CGTGCATGAA TGATGTCA TTCTGGTCGG chr16:57096458-57096538 14 3.90e-05 ggctttctca tgatgtca tggcacgtgt chr15:85458329-85458409 40 3.90e-05 GAGTGTGGGA TGATGTCA TCCTACCCGT chr3:186314813-186314893 47 3.90e-05 GGTTTGAGGA TGATGTCA TACAGCGCAA chr18:2875662-2875742 46 3.90e-05 CAGTTGGAGA TGATGTCA TTTTTAGCCA chr2:206767295-206767375 22 3.90e-05 TTCTGTGAGA TGATGTCA TCATAATGGC chr17:13319499-13319579 59 3.90e-05 ACAGCAGCAA TGATGTCA CTTTGGCTTC chr3:150089743-150089823 33 3.90e-05 TGTAGCATGG TGATGTCA CCCCACAGTT chr18:43996813-43996893 14 3.90e-05 agaattggca tgatgtca cttctgctac chr21:45437668-45437748 24 3.90e-05 gcgacgataa tgatgtca tcgaaagaag chr12:56440975-56441055 42 3.90e-05 CAGTTAAAGA TGATGTCA TGAGTAGTTA chr18:497080-497160 25 3.90e-05 TAATATATAA TGATGTCA TTATTTTGGT chr7:66691478-66691558 31 3.90e-05 cagttcccag tgatgtca tctctgacca chr12:124675621-12467570 62 3.90e-05 ggctctaaga tgatgtca cttccactgc chr3:99721801-99721881 46 5.12e-05 AGAGGAGGGA TGACGTAA TGGATTGTGC chr1:113361851-113361931 27 5.12e-05 GCTTATCATG TGACGTAA TCCTAACTTC chr20:354245-354325 71 5.12e-05 tgacacaaga tgacgtaa gg chr22:42228706-42228786 15 5.12e-05 GCTGGGAAGA TGACGTAA TGTGCTCCCA chr1:150602115-150602195 30 5.12e-05 GATAGGGCAA TGACGTAA CGATCTACCA chr3:156530480-156530560 23 5.12e-05 GTTTGCAACA TGACGTAA TGTCAACAGA chr10:70716919-70716999 27 5.12e-05 CCTGAGAAGA TGACGTAA TTCAGTTATT chr12:7013852-7013932 32 5.12e-05 AGGTCTTGGG TGACGTAA TGACTAGCCC chr1:208525264-208525344 23 5.12e-05 gtttttacaa tgacgtaa tcacctaacg chr17:53573915-53573995 51 5.12e-05 TCAGGGAAGA TGACGTAA TGAGAAAGAG chrX:54666190-54666270 28 5.12e-05 CCATTGACAA TGACGTAA TCTTGCAGCT chr4:75375236-75375316 29 5.12e-05 tctcttcaga tgacgtaa ttgtgtattc chr8:41862935-41863015 26 5.12e-05 GAGAACATAG TGACGTAA TGCTCAATAA chr6:3177116-3177196 24 6.33e-05 GCAGGTCTGA TTACGTCA CCGCTGGAGA chr9:100709505-100709585 49 6.33e-05 aaatatacaa ttacgtca tctgcaaaca chr1:22380077-22380157 50 6.33e-05 GTGTGGAAGA TTACGTCA TCGCGGTATA chr6:41735044-41735124 37 6.33e-05 ctgaggcaag ttacgtca cctcttggcc chr8:50042502-50042582 51 6.33e-05 TATGACATAA TTACGTCA TTGGGAACTT chr19:7829134-7829214 42 6.33e-05 gagacatgca ttacgtca tttcttattt chr16:11222763-11222843 27 6.33e-05 ttaaatcaga ttacgtca tacccctgcc chr1:155830410-155830490 51 6.33e-05 GCAGAAAGCA TTACGTCA TTTCAGAGCG chr10:111981684-11198176 28 6.33e-05 GGGTTTAGCA TTACGTCA TCCCTTCTAG chr7:127484890-127484970 12 7.84e-05 CAGTAGACGA TGAGGTCA TCCTATTCTG chr15:100243964-10024404 46 7.84e-05 TCATTTTTGG TGAGGTCA CCTTTTTCAG chr14:91294528-91294608 52 7.84e-05 AGCCTCCTGA TGAGGTCA TGCAGTTCCT chr10:97026584-97026664 37 1.08e-04 TTAGAAGGGA TGATGTAA TTGTTTGGGC chr14:90920806-90920886 63 1.18e-04 AGGCCGAGCA TTACATCA TCACCGTGGT chr19:16187139-16187219 71 1.68e-04 TCCGGCCGGG TGACCTCA TC chr11:9286969-9287049 24 1.68e-04 GGGGAAAGGA TGACGTGA TGCTCTTCGG chr1:154909555-154909635 63 1.80e-04 ATCTCTGGAG TGAGATCA CGTTGGAGAC chr16:4511388-4511468 20 2.13e-04 CTAAACACGT TTAGGTCA CTCGTCCCAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:52321993-52322073 1.5e-05 47_[+1]_25 chr16:27561308-27561388 1.5e-05 46_[+1]_26 chr19:50979544-50979624 1.5e-05 13_[+1]_59 chr18:76829114-76829194 1.5e-05 25_[+1]_47 chr2:74781531-74781611 1.5e-05 28_[+1]_44 chr3:48514492-48514572 1.5e-05 53_[+1]_19 chr19:45970908-45970988 1.5e-05 20_[+1]_52 chrX:118824911-118824991 1.5e-05 25_[+1]_47 chr19:42901111-42901191 1.5e-05 16_[+1]_56 chrX:54070928-54071008 1.5e-05 23_[+1]_49 chr7:135595449-135595529 1.5e-05 45_[+1]_27 chr16:89766704-89766784 1.5e-05 46_[+1]_26 chrX:155111413-155111493 1.5e-05 50_[+1]_22 chr17:29421806-29421886 1.5e-05 22_[+1]_50 chr9:133327652-133327732 1.5e-05 49_[+1]_23 chr1:1790228-1790308 1.5e-05 25_[+1]_47 chr22:38910708-38910788 1.5e-05 49_[+1]_23 chr5:64331581-64331661 1.5e-05 49_[+1]_23 chr14:50053197-50053277 1.5e-05 49_[+1]_23 chr12:100660873-10066095 1.5e-05 50_[+1]_22 chr19:17792468-17792548 1.5e-05 28_[+1]_44 chr8:1706667-1706747 1.5e-05 26_[+1]_46 chr11:65189685-65189765 1.5e-05 39_[+1]_33 chr11:12695821-12695901 1.5e-05 26_[+1]_46 chr19:55574651-55574731 1.5e-05 47_[+1]_25 chr5:175964846-175964926 1.5e-05 23_[+1]_49 chr5:179453517-179453597 1.5e-05 22_[+1]_50 chr19:49164460-49164540 1.5e-05 51_[+1]_21 chr16:57770811-57770891 1.5e-05 51_[+1]_21 chr22:18540548-18540628 1.5e-05 48_[+1]_24 chr6:27832916-27832996 1.5e-05 25_[+1]_47 chr12:56521667-56521747 1.5e-05 21_[+1]_51 chr9:86323809-86323889 1.5e-05 48_[+1]_24 chr4:185760132-185760212 1.5e-05 48_[+1]_24 chr11:108535537-10853561 1.5e-05 19_[+1]_53 chr6:139456064-139456144 1.5e-05 12_[+1]_60 chrX:133941134-133941214 1.5e-05 25_[+1]_47 chr19:49939681-49939761 1.5e-05 52_[+1]_20 chr3:182727679-182727759 1.5e-05 38_[+1]_34 chr5:14264879-14264959 1.5e-05 31_[+1]_41 chr17:43229446-43229526 1.5e-05 50_[+1]_22 chr7:120625356-120625436 1.5e-05 50_[+1]_22 chr7:139900169-139900249 1.5e-05 46_[+1]_26 chr22:32340286-32340366 1.5e-05 65_[+1]_7 chr21:18983988-18984068 1.5e-05 24_[+1]_48 chr6:43777230-43777310 1.5e-05 25_[+1]_47 chr6:136647264-136647344 1.5e-05 48_[+1]_24 chr3:15965295-15965375 1.5e-05 40_[+1]_32 chr1:201140724-201140804 1.5e-05 45_[+1]_27 chr9:100395097-100395177 1.5e-05 22_[+1]_50 chr14:60715689-60715769 1.5e-05 60_[+1]_12 chr11:77185395-77185475 1.5e-05 51_[+1]_21 chr1:183573552-183573632 1.5e-05 26_[+1]_46 chr11:1585908-1585988 1.5e-05 10_[+1]_62 chr18:72163387-72163467 1.5e-05 24_[+1]_48 chr11:1593556-1593636 1.5e-05 11_[+1]_61 chr19:17666298-17666378 1.5e-05 50_[+1]_22 chr15:72766082-72766162 1.5e-05 22_[+1]_50 chr5:141150735-141150815 1.5e-05 32_[+1]_40 chr19:2962176-2962256 1.5e-05 22_[+1]_50 chr7:116660192-116660272 1.5e-05 44_[+1]_28 chr12:64616314-64616394 1.5e-05 67_[+1]_5 chr2:44314514-44314594 1.5e-05 23_[+1]_49 chr19:47617025-47617105 1.5e-05 22_[+1]_50 chr18:77866838-77866918 1.5e-05 50_[+1]_22 chr22:39097051-39097131 1.5e-05 21_[+1]_51 chrX:39612780-39612860 1.5e-05 53_[+1]_19 chr1:39624463-39624543 1.5e-05 25_[+1]_47 chr8:23409026-23409106 1.5e-05 22_[+1]_50 chr1:28099514-28099594 1.5e-05 21_[+1]_51 chr10:71992303-71992383 1.5e-05 49_[+1]_23 chr17:7835439-7835519 1.5e-05 50_[+1]_22 chr19:996501-996581 1.5e-05 48_[+1]_24 chr14:93821385-93821465 1.5e-05 47_[+1]_25 chr1:43510614-43510694 1.5e-05 25_[+1]_47 chr7:5492773-5492853 1.5e-05 51_[+1]_21 chr6:149492288-149492368 1.5e-05 51_[+1]_21 chr6:18035122-18035202 1.5e-05 24_[+1]_48 chrX:48397740-48397820 1.5e-05 49_[+1]_23 chr19:46503103-46503183 1.5e-05 44_[+1]_28 chr12:122098053-12209813 1.5e-05 63_[+1]_9 chr10:43474927-43475007 1.5e-05 22_[+1]_50 chr15:45748907-45748987 1.5e-05 22_[+1]_50 chr3:107941305-107941385 1.5e-05 39_[+1]_33 chr2:179107138-179107218 1.5e-05 48_[+1]_24 chr19:51506073-51506153 1.5e-05 50_[+1]_22 chr1:15433174-15433254 1.5e-05 23_[+1]_49 chr21:46001993-46002073 1.5e-05 21_[+1]_51 chr14:68086439-68086519 1.5e-05 25_[+1]_47 chr21:43099267-43099347 1.5e-05 50_[+1]_22 chr3:14430869-14430949 1.5e-05 40_[+1]_32 chr8:130704710-130704790 2.7e-05 23_[+1]_49 chr11:46907944-46908024 2.7e-05 56_[+1]_16 chr6:150255535-150255615 2.7e-05 33_[+1]_39 chr10:16993231-16993311 2.7e-05 35_[+1]_37 chr16:87989996-87990076 2.7e-05 22_[+1]_50 chr6:43538920-43539000 2.7e-05 49_[+1]_23 chr17:76554586-76554666 2.7e-05 31_[+1]_41 chr2:88899771-88899851 2.7e-05 33_[+1]_39 chr11:95440200-95440280 2.7e-05 23_[+1]_49 chr2:9310987-9311067 2.7e-05 50_[+1]_22 chr19:49078095-49078175 2.7e-05 26_[+1]_46 chr17:31082197-31082277 2.7e-05 25_[+1]_47 chr3:177766662-177766742 2.7e-05 26_[+1]_46 chr3:48701506-48701586 2.7e-05 64_[+1]_8 chr17:74537082-74537162 2.7e-05 22_[+1]_50 chr12:110481112-11048119 2.7e-05 44_[+1]_28 chr11:61717168-61717248 3.9e-05 26_[+1]_46 chr2:152475974-152476054 3.9e-05 25_[+1]_47 chr16:57096458-57096538 3.9e-05 13_[+1]_59 chr15:85458329-85458409 3.9e-05 39_[+1]_33 chr3:186314813-186314893 3.9e-05 46_[+1]_26 chr18:2875662-2875742 3.9e-05 45_[+1]_27 chr2:206767295-206767375 3.9e-05 21_[+1]_51 chr17:13319499-13319579 3.9e-05 58_[+1]_14 chr3:150089743-150089823 3.9e-05 32_[+1]_40 chr18:43996813-43996893 3.9e-05 13_[+1]_59 chr21:45437668-45437748 3.9e-05 23_[+1]_49 chr12:56440975-56441055 3.9e-05 41_[+1]_31 chr18:497080-497160 3.9e-05 24_[+1]_48 chr7:66691478-66691558 3.9e-05 30_[+1]_42 chr12:124675621-12467570 3.9e-05 61_[+1]_11 chr3:99721801-99721881 5.1e-05 45_[+1]_27 chr1:113361851-113361931 5.1e-05 26_[+1]_46 chr20:354245-354325 5.1e-05 70_[+1]_2 chr22:42228706-42228786 5.1e-05 14_[+1]_58 chr1:150602115-150602195 5.1e-05 29_[+1]_43 chr3:156530480-156530560 5.1e-05 22_[+1]_50 chr10:70716919-70716999 5.1e-05 26_[+1]_46 chr12:7013852-7013932 5.1e-05 31_[+1]_41 chr1:208525264-208525344 5.1e-05 22_[+1]_50 chr17:53573915-53573995 5.1e-05 50_[+1]_22 chrX:54666190-54666270 5.1e-05 27_[+1]_45 chr4:75375236-75375316 5.1e-05 28_[+1]_44 chr8:41862935-41863015 5.1e-05 25_[+1]_47 chr6:3177116-3177196 6.3e-05 23_[+1]_49 chr9:100709505-100709585 6.3e-05 48_[+1]_24 chr1:22380077-22380157 6.3e-05 49_[+1]_23 chr6:41735044-41735124 6.3e-05 36_[+1]_36 chr8:50042502-50042582 6.3e-05 50_[+1]_22 chr19:7829134-7829214 6.3e-05 41_[+1]_31 chr16:11222763-11222843 6.3e-05 26_[+1]_46 chr1:155830410-155830490 6.3e-05 50_[+1]_22 chr10:111981684-11198176 6.3e-05 27_[+1]_45 chr7:127484890-127484970 7.8e-05 11_[+1]_61 chr15:100243964-10024404 7.8e-05 45_[+1]_27 chr14:91294528-91294608 7.8e-05 51_[+1]_21 chr10:97026584-97026664 0.00011 36_[+1]_36 chr14:90920806-90920886 0.00012 62_[+1]_10 chr19:16187139-16187219 0.00017 70_[+1]_2 chr11:9286969-9287049 0.00017 23_[+1]_49 chr1:154909555-154909635 0.00018 62_[+1]_10 chr16:4511388-4511468 0.00021 19_[+1]_53 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGACGTCA width=8 seqs=153 chr3:52321993-52322073 ( 48) TGACGTCA 1 chr16:27561308-27561388 ( 47) TGACGTCA 1 chr19:50979544-50979624 ( 14) TGACGTCA 1 chr18:76829114-76829194 ( 26) TGACGTCA 1 chr2:74781531-74781611 ( 29) TGACGTCA 1 chr3:48514492-48514572 ( 54) TGACGTCA 1 chr19:45970908-45970988 ( 21) TGACGTCA 1 chrX:118824911-118824991 ( 26) TGACGTCA 1 chr19:42901111-42901191 ( 17) TGACGTCA 1 chrX:54070928-54071008 ( 24) TGACGTCA 1 chr7:135595449-135595529 ( 46) TGACGTCA 1 chr16:89766704-89766784 ( 47) TGACGTCA 1 chrX:155111413-155111493 ( 51) TGACGTCA 1 chr17:29421806-29421886 ( 23) TGACGTCA 1 chr9:133327652-133327732 ( 50) TGACGTCA 1 chr1:1790228-1790308 ( 26) TGACGTCA 1 chr22:38910708-38910788 ( 50) TGACGTCA 1 chr5:64331581-64331661 ( 50) TGACGTCA 1 chr14:50053197-50053277 ( 50) TGACGTCA 1 chr12:100660873-10066095 ( 51) TGACGTCA 1 chr19:17792468-17792548 ( 29) TGACGTCA 1 chr8:1706667-1706747 ( 27) TGACGTCA 1 chr11:65189685-65189765 ( 40) TGACGTCA 1 chr11:12695821-12695901 ( 27) TGACGTCA 1 chr19:55574651-55574731 ( 48) TGACGTCA 1 chr5:175964846-175964926 ( 24) TGACGTCA 1 chr5:179453517-179453597 ( 23) TGACGTCA 1 chr19:49164460-49164540 ( 52) TGACGTCA 1 chr16:57770811-57770891 ( 52) TGACGTCA 1 chr22:18540548-18540628 ( 49) TGACGTCA 1 chr6:27832916-27832996 ( 26) TGACGTCA 1 chr12:56521667-56521747 ( 22) TGACGTCA 1 chr9:86323809-86323889 ( 49) TGACGTCA 1 chr4:185760132-185760212 ( 49) TGACGTCA 1 chr11:108535537-10853561 ( 20) TGACGTCA 1 chr6:139456064-139456144 ( 13) TGACGTCA 1 chrX:133941134-133941214 ( 26) TGACGTCA 1 chr19:49939681-49939761 ( 53) TGACGTCA 1 chr3:182727679-182727759 ( 39) TGACGTCA 1 chr5:14264879-14264959 ( 32) TGACGTCA 1 chr17:43229446-43229526 ( 51) TGACGTCA 1 chr7:120625356-120625436 ( 51) TGACGTCA 1 chr7:139900169-139900249 ( 47) TGACGTCA 1 chr22:32340286-32340366 ( 66) TGACGTCA 1 chr21:18983988-18984068 ( 25) TGACGTCA 1 chr6:43777230-43777310 ( 26) TGACGTCA 1 chr6:136647264-136647344 ( 49) TGACGTCA 1 chr3:15965295-15965375 ( 41) TGACGTCA 1 chr1:201140724-201140804 ( 46) TGACGTCA 1 chr9:100395097-100395177 ( 23) TGACGTCA 1 chr14:60715689-60715769 ( 61) TGACGTCA 1 chr11:77185395-77185475 ( 52) TGACGTCA 1 chr1:183573552-183573632 ( 27) TGACGTCA 1 chr11:1585908-1585988 ( 11) TGACGTCA 1 chr18:72163387-72163467 ( 25) TGACGTCA 1 chr11:1593556-1593636 ( 12) TGACGTCA 1 chr19:17666298-17666378 ( 51) TGACGTCA 1 chr15:72766082-72766162 ( 23) TGACGTCA 1 chr5:141150735-141150815 ( 33) TGACGTCA 1 chr19:2962176-2962256 ( 23) TGACGTCA 1 chr7:116660192-116660272 ( 45) TGACGTCA 1 chr12:64616314-64616394 ( 68) TGACGTCA 1 chr2:44314514-44314594 ( 24) TGACGTCA 1 chr19:47617025-47617105 ( 23) TGACGTCA 1 chr18:77866838-77866918 ( 51) TGACGTCA 1 chr22:39097051-39097131 ( 22) TGACGTCA 1 chrX:39612780-39612860 ( 54) TGACGTCA 1 chr1:39624463-39624543 ( 26) TGACGTCA 1 chr8:23409026-23409106 ( 23) TGACGTCA 1 chr1:28099514-28099594 ( 22) TGACGTCA 1 chr10:71992303-71992383 ( 50) TGACGTCA 1 chr17:7835439-7835519 ( 51) TGACGTCA 1 chr19:996501-996581 ( 49) TGACGTCA 1 chr14:93821385-93821465 ( 48) TGACGTCA 1 chr1:43510614-43510694 ( 26) TGACGTCA 1 chr7:5492773-5492853 ( 52) TGACGTCA 1 chr6:149492288-149492368 ( 52) TGACGTCA 1 chr6:18035122-18035202 ( 25) TGACGTCA 1 chrX:48397740-48397820 ( 50) TGACGTCA 1 chr19:46503103-46503183 ( 45) TGACGTCA 1 chr12:122098053-12209813 ( 64) TGACGTCA 1 chr10:43474927-43475007 ( 23) TGACGTCA 1 chr15:45748907-45748987 ( 23) TGACGTCA 1 chr3:107941305-107941385 ( 40) TGACGTCA 1 chr2:179107138-179107218 ( 49) TGACGTCA 1 chr19:51506073-51506153 ( 51) TGACGTCA 1 chr1:15433174-15433254 ( 24) TGACGTCA 1 chr21:46001993-46002073 ( 22) TGACGTCA 1 chr14:68086439-68086519 ( 26) TGACGTCA 1 chr21:43099267-43099347 ( 51) TGACGTCA 1 chr3:14430869-14430949 ( 41) TGACGTCA 1 chr8:130704710-130704790 ( 24) TGACATCA 1 chr11:46907944-46908024 ( 57) TGACATCA 1 chr6:150255535-150255615 ( 34) TGACATCA 1 chr10:16993231-16993311 ( 36) TGACATCA 1 chr16:87989996-87990076 ( 23) TGACATCA 1 chr6:43538920-43539000 ( 50) TGACATCA 1 chr17:76554586-76554666 ( 32) TGACATCA 1 chr2:88899771-88899851 ( 34) TGACATCA 1 chr11:95440200-95440280 ( 24) TGACATCA 1 chr2:9310987-9311067 ( 51) TGACATCA 1 chr19:49078095-49078175 ( 27) TGACATCA 1 chr17:31082197-31082277 ( 26) TGACATCA 1 chr3:177766662-177766742 ( 27) TGACATCA 1 chr3:48701506-48701586 ( 65) TGACATCA 1 chr17:74537082-74537162 ( 23) TGACATCA 1 chr12:110481112-11048119 ( 45) TGACATCA 1 chr11:61717168-61717248 ( 27) TGATGTCA 1 chr2:152475974-152476054 ( 26) TGATGTCA 1 chr16:57096458-57096538 ( 14) TGATGTCA 1 chr15:85458329-85458409 ( 40) TGATGTCA 1 chr3:186314813-186314893 ( 47) TGATGTCA 1 chr18:2875662-2875742 ( 46) TGATGTCA 1 chr2:206767295-206767375 ( 22) TGATGTCA 1 chr17:13319499-13319579 ( 59) TGATGTCA 1 chr3:150089743-150089823 ( 33) TGATGTCA 1 chr18:43996813-43996893 ( 14) TGATGTCA 1 chr21:45437668-45437748 ( 24) TGATGTCA 1 chr12:56440975-56441055 ( 42) TGATGTCA 1 chr18:497080-497160 ( 25) TGATGTCA 1 chr7:66691478-66691558 ( 31) TGATGTCA 1 chr12:124675621-12467570 ( 62) TGATGTCA 1 chr3:99721801-99721881 ( 46) TGACGTAA 1 chr1:113361851-113361931 ( 27) TGACGTAA 1 chr20:354245-354325 ( 71) TGACGTAA 1 chr22:42228706-42228786 ( 15) TGACGTAA 1 chr1:150602115-150602195 ( 30) TGACGTAA 1 chr3:156530480-156530560 ( 23) TGACGTAA 1 chr10:70716919-70716999 ( 27) TGACGTAA 1 chr12:7013852-7013932 ( 32) TGACGTAA 1 chr1:208525264-208525344 ( 23) TGACGTAA 1 chr17:53573915-53573995 ( 51) TGACGTAA 1 chrX:54666190-54666270 ( 28) TGACGTAA 1 chr4:75375236-75375316 ( 29) TGACGTAA 1 chr8:41862935-41863015 ( 26) TGACGTAA 1 chr6:3177116-3177196 ( 24) TTACGTCA 1 chr9:100709505-100709585 ( 49) TTACGTCA 1 chr1:22380077-22380157 ( 50) TTACGTCA 1 chr6:41735044-41735124 ( 37) TTACGTCA 1 chr8:50042502-50042582 ( 51) TTACGTCA 1 chr19:7829134-7829214 ( 42) TTACGTCA 1 chr16:11222763-11222843 ( 27) TTACGTCA 1 chr1:155830410-155830490 ( 51) TTACGTCA 1 chr10:111981684-11198176 ( 28) TTACGTCA 1 chr7:127484890-127484970 ( 12) TGAGGTCA 1 chr15:100243964-10024404 ( 46) TGAGGTCA 1 chr14:91294528-91294608 ( 52) TGAGGTCA 1 chr10:97026584-97026664 ( 37) TGATGTAA 1 chr14:90920806-90920886 ( 63) TTACATCA 1 chr19:16187139-16187219 ( 71) TGACCTCA 1 chr11:9286969-9287049 ( 24) TGACGTGA 1 chr1:154909555-154909635 ( 63) TGAGATCA 1 chr16:4511388-4511468 ( 20) TTAGGTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.71255 E= 1.4e-268 -1390 -1390 -1390 214 -1390 -1390 174 -166 216 -1390 -1390 -1390 -1390 167 -309 -112 -93 -537 166 -1390 -1390 -1390 -1390 214 -129 173 -541 -1390 216 -1390 -1390 -1390 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 153 E= 1.4e-268 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.928105 0.071895 1.000000 0.000000 0.000000 0.000000 0.000000 0.862745 0.032680 0.104575 0.117647 0.006536 0.875817 0.000000 0.000000 0.000000 0.000000 1.000000 0.091503 0.901961 0.006536 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGACGTCA MEME-1 regular expression -------------------------------------------------------------------------------- TGACGTCA -------------------------------------------------------------------------------- Time 4.54 secs. ******************************************************************************** ******************************************************************************** MOTIF AAAWRAAA MEME-2 width = 8 sites = 14 llr = 136 E-value = 1.1e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A a9966aaa pos.-specific C :::::::: probability G ::::4::: matrix T :1141::: bits 2.2 * *** 1.9 * *** 1.7 ** *** 1.5 *** *** Relative 1.3 **** *** Entropy 1.1 **** *** (14.0 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel AAAAAAAA consensus TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:154909555-154909635 46 6.34e-06 AAACTTTAGG AAAAAAAA TCTCTGGAGT chr8:23409026-23409106 72 6.34e-06 TCCAAAGGAA AAAAAAAA A chr12:110481112-11048119 72 6.34e-06 gtcggaaaaa aaaaaaaa g chr5:141150735-141150815 21 1.28e-05 CCTTTTCTTT AAATAAAA GGAATGACGT chr7:104909617-104909697 4 1.28e-05 GCA AAATAAAA TACAAACAAG chr3:48514492-48514572 30 2.06e-05 CTTTTGGAGA AAAAGAAA GCAAATCTCC chr13:76112093-76112173 34 2.06e-05 ACATTGAGCT AAAAGAAA ATTATTTTAT chr12:56440975-56441055 2 2.06e-05 a aaaagaaa aTTGGGTGAC chr14:50053197-50053277 11 2.86e-05 TGGGTGAGTA AAATGAAA TCTTAGAGGC chr6:43538920-43539000 70 2.86e-05 ATTCTTTACA AAATGAAA AGA chr7:135595449-135595529 38 3.50e-05 GAGTCATTAC AATAAAAA TGACGTCATT chr1:19229157-19229237 26 3.50e-05 AGCTTCGGCT AATAAAAA ATATTTCTAG chr1:1790228-1790308 70 6.24e-05 ggctgctgtg ataaaaaa gca chr20:42219400-42219480 8 6.89e-05 AAGAACA AAATTAAA TGGGTTTATT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:154909555-154909635 6.3e-06 45_[+2]_27 chr8:23409026-23409106 6.3e-06 71_[+2]_1 chr12:110481112-11048119 6.3e-06 71_[+2]_1 chr5:141150735-141150815 1.3e-05 20_[+2]_52 chr7:104909617-104909697 1.3e-05 3_[+2]_69 chr3:48514492-48514572 2.1e-05 29_[+2]_43 chr13:76112093-76112173 2.1e-05 33_[+2]_39 chr12:56440975-56441055 2.1e-05 1_[+2]_71 chr14:50053197-50053277 2.9e-05 10_[+2]_62 chr6:43538920-43539000 2.9e-05 69_[+2]_3 chr7:135595449-135595529 3.5e-05 37_[+2]_35 chr1:19229157-19229237 3.5e-05 25_[+2]_47 chr1:1790228-1790308 6.2e-05 69_[+2]_3 chr20:42219400-42219480 6.9e-05 7_[+2]_65 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAAWRAAA width=8 seqs=14 chr1:154909555-154909635 ( 46) AAAAAAAA 1 chr8:23409026-23409106 ( 72) AAAAAAAA 1 chr12:110481112-11048119 ( 72) AAAAAAAA 1 chr5:141150735-141150815 ( 21) AAATAAAA 1 chr7:104909617-104909697 ( 4) AAATAAAA 1 chr3:48514492-48514572 ( 30) AAAAGAAA 1 chr13:76112093-76112173 ( 34) AAAAGAAA 1 chr12:56440975-56441055 ( 2) AAAAGAAA 1 chr14:50053197-50053277 ( 11) AAATGAAA 1 chr6:43538920-43539000 ( 70) AAATGAAA 1 chr7:135595449-135595529 ( 38) AATAAAAA 1 chr1:19229157-19229237 ( 26) AATAAAAA 1 chr1:1790228-1790308 ( 70) ATAAAAAA 1 chr20:42219400-42219480 ( 8) AAATTAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.0178 E= 1.1e+002 216 -1045 -1045 -1045 205 -1045 -1045 -166 194 -1045 -1045 -67 152 -1045 -1045 65 135 -1045 36 -166 216 -1045 -1045 -1045 216 -1045 -1045 -1045 216 -1045 -1045 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 14 E= 1.1e+002 1.000000 0.000000 0.000000 0.000000 0.928571 0.000000 0.000000 0.071429 0.857143 0.000000 0.000000 0.142857 0.642857 0.000000 0.000000 0.357143 0.571429 0.000000 0.357143 0.071429 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAAWRAAA MEME-2 regular expression -------------------------------------------------------------------------------- AAA[AT][AG]AAA -------------------------------------------------------------------------------- Time 7.96 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGCCAAT MEME-3 width = 8 sites = 12 llr = 120 E-value = 2.8e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a:::a81 pos.-specific C a::aa::: probability G ::a:::11 matrix T ::::::18 bits 2.2 * * 1.9 ****** 1.7 ****** 1.5 ****** Relative 1.3 ******** Entropy 1.1 ******** (14.4 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CAGCCAAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:61717168-61717248 1 1.43e-05 . CAGCCAAT CACAGCCAGA chr19:42901111-42901191 37 1.43e-05 CACTATCTTC CAGCCAAT GGACACTCGG chr3:150089743-150089823 10 1.43e-05 TCTTGTCTC CAGCCAAT AATCTTGTAG chr11:1585908-1585988 23 1.43e-05 ACGTCACCGG CAGCCAAT GGGATCGCAC chr11:1593556-1593636 24 1.43e-05 ACGTCACCTG CAGCCAAT CAGCGCGCGC chr14:90920806-90920886 37 1.43e-05 GCAGGACCGG CAGCCAAT GAAGGTGAAG chr14:91294528-91294608 29 1.43e-05 GCGGCGGCGG CAGCCAAT GAGGGAGCCT chr7:5492773-5492853 24 1.43e-05 CTTGGCCATC CAGCCAAT AGCAACAGGC chr3:52321993-52322073 14 4.28e-05 CATTACGCGG CAGCCATT TCCCTCGCTA chr8:17013352-17013432 36 4.28e-05 CCTGGATTCA CAGCCAAA AATGCTTCTT chr11:46907944-46908024 45 7.80e-05 CTGCGCACGT CAGCCAGT GGGATGACAT chrX:19002612-19002692 40 7.80e-05 CTGCCAACCA CAGCCAAG GCCAGAGAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:61717168-61717248 1.4e-05 [+3]_72 chr19:42901111-42901191 1.4e-05 36_[+3]_36 chr3:150089743-150089823 1.4e-05 9_[+3]_63 chr11:1585908-1585988 1.4e-05 22_[+3]_50 chr11:1593556-1593636 1.4e-05 23_[+3]_49 chr14:90920806-90920886 1.4e-05 36_[+3]_36 chr14:91294528-91294608 1.4e-05 28_[+3]_44 chr7:5492773-5492853 1.4e-05 23_[+3]_49 chr3:52321993-52322073 4.3e-05 13_[+3]_59 chr8:17013352-17013432 4.3e-05 35_[+3]_37 chr11:46907944-46908024 7.8e-05 44_[+3]_28 chrX:19002612-19002692 7.8e-05 39_[+3]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGCCAAT width=8 seqs=12 chr11:61717168-61717248 ( 1) CAGCCAAT 1 chr19:42901111-42901191 ( 37) CAGCCAAT 1 chr3:150089743-150089823 ( 10) CAGCCAAT 1 chr11:1585908-1585988 ( 23) CAGCCAAT 1 chr11:1593556-1593636 ( 24) CAGCCAAT 1 chr14:90920806-90920886 ( 37) CAGCCAAT 1 chr14:91294528-91294608 ( 29) CAGCCAAT 1 chr7:5492773-5492853 ( 24) CAGCCAAT 1 chr3:52321993-52322073 ( 14) CAGCCATT 1 chr8:17013352-17013432 ( 36) CAGCCAAA 1 chr11:46907944-46908024 ( 45) CAGCCAGT 1 chrX:19002612-19002692 ( 40) CAGCCAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.0174 E= 2.8e+002 -1023 188 -1023 -1023 216 -1023 -1023 -1023 -1023 -1023 185 -1023 -1023 188 -1023 -1023 -1023 188 -1023 -1023 216 -1023 -1023 -1023 190 -1023 -173 -144 -142 -1023 -173 188 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 2.8e+002 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.833333 0.000000 0.083333 0.083333 0.083333 0.000000 0.083333 0.833333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGCCAAT MEME-3 regular expression -------------------------------------------------------------------------------- CAGCCAAT -------------------------------------------------------------------------------- Time 11.38 secs. ******************************************************************************** ******************************************************************************** MOTIF CCAGGAGG MEME-4 width = 8 sites = 16 llr = 150 E-value = 1.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::8::a1: pos.-specific C aa:::::: probability G :::aa:98 matrix T ::3::::2 bits 2.2 * 1.9 ** *** 1.7 ** *** 1.5 ** *** Relative 1.3 ******** Entropy 1.1 ******** (13.5 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel CCAGGAGG consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr12:117257339-11725741 50 2.22e-05 GCCCGCGCCG CCAGGAGG GGGATTAATG chr17:29421806-29421886 34 2.22e-05 GACGTCACCT CCAGGAGG ACTCGCTTTT chr10:99094568-99094648 71 2.22e-05 CGTTGTCCCT CCAGGAGG GG chr3:72201904-72201984 55 2.22e-05 TCCGAAGGTT CCAGGAGG ATGAAAACAT chr11:129872266-12987234 25 2.22e-05 GAACGCGGCG CCAGGAGG GCCTGCTGGA chr1:43510614-43510694 40 2.22e-05 gtcatgctga ccaggagg ataagccgag chr6:83073355-83073435 4 2.22e-05 CCA CCAGGAGG AGGCGCGCAG chr19:50979544-50979624 55 4.46e-05 TGATGACGTC CCTGGAGG GGGCGGCTCC chr22:42228706-42228786 39 4.46e-05 CCCAGCCAGG CCTGGAGG CGGCCAGCGG chr7:2595224-2595304 22 4.46e-05 AGACTGCACC CCTGGAGG CCGCTCTGGA chr19:46503103-46503183 5 4.46e-05 GGGG CCTGGAGG GCAGCCGCAC chr15:85458329-85458409 26 6.27e-05 CATCTCAGTC CCAGGAGT GTGGGATGAT chr1:43609282-43609362 50 6.27e-05 CGTTAGGCAC CCAGGAGT GGGCAGTCAT chr9:71788931-71789011 25 6.27e-05 ccgcccccgg ccAGGAGT CGCGCGTGAC chr8:107669895-107669975 21 8.06e-05 CGCATCGGTT CCAGGAAG AATACACCTA chr21:46001993-46002073 7 8.06e-05 GGAAAG CCAGGAAG GCTAGGATGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:117257339-11725741 2.2e-05 49_[+4]_23 chr17:29421806-29421886 2.2e-05 33_[+4]_39 chr10:99094568-99094648 2.2e-05 70_[+4]_2 chr3:72201904-72201984 2.2e-05 54_[+4]_18 chr11:129872266-12987234 2.2e-05 24_[+4]_48 chr1:43510614-43510694 2.2e-05 39_[+4]_33 chr6:83073355-83073435 2.2e-05 3_[+4]_69 chr19:50979544-50979624 4.5e-05 54_[+4]_18 chr22:42228706-42228786 4.5e-05 38_[+4]_34 chr7:2595224-2595304 4.5e-05 21_[+4]_51 chr19:46503103-46503183 4.5e-05 4_[+4]_68 chr15:85458329-85458409 6.3e-05 25_[+4]_47 chr1:43609282-43609362 6.3e-05 49_[+4]_23 chr9:71788931-71789011 6.3e-05 24_[+4]_48 chr8:107669895-107669975 8.1e-05 20_[+4]_52 chr21:46001993-46002073 8.1e-05 6_[+4]_66 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCAGGAGG width=8 seqs=16 chr12:117257339-11725741 ( 50) CCAGGAGG 1 chr17:29421806-29421886 ( 34) CCAGGAGG 1 chr10:99094568-99094648 ( 71) CCAGGAGG 1 chr3:72201904-72201984 ( 55) CCAGGAGG 1 chr11:129872266-12987234 ( 25) CCAGGAGG 1 chr1:43510614-43510694 ( 40) CCAGGAGG 1 chr6:83073355-83073435 ( 4) CCAGGAGG 1 chr19:50979544-50979624 ( 55) CCTGGAGG 1 chr22:42228706-42228786 ( 39) CCTGGAGG 1 chr7:2595224-2595304 ( 22) CCTGGAGG 1 chr19:46503103-46503183 ( 5) CCTGGAGG 1 chr15:85458329-85458409 ( 26) CCAGGAGT 1 chr1:43609282-43609362 ( 50) CCAGGAGT 1 chr9:71788931-71789011 ( 25) CCAGGAGT 1 chr8:107669895-107669975 ( 21) CCAGGAAG 1 chr21:46001993-46002073 ( 7) CCAGGAAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.8918 E= 1.5e+003 -1064 188 -1064 -1064 -1064 188 -1064 -1064 174 -1064 -1064 14 -1064 -1064 185 -1064 -1064 -1064 185 -1064 216 -1064 -1064 -1064 -84 -1064 166 -1064 -1064 -1064 155 -27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 16 E= 1.5e+003 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.750000 0.000000 0.000000 0.250000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.125000 0.000000 0.875000 0.000000 0.000000 0.000000 0.812500 0.187500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCAGGAGG MEME-4 regular expression -------------------------------------------------------------------------------- CC[AT]GGAGG -------------------------------------------------------------------------------- Time 14.79 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCTGGGA MEME-5 width = 8 sites = 12 llr = 118 E-value = 5.7e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::3::3a pos.-specific C :aa::::: probability G ::::aa8: matrix T a::8:::: bits 2.2 * * 1.9 *** ** * 1.7 *** ** * 1.5 *** ** * Relative 1.3 ****** * Entropy 1.1 ******** (14.2 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ******** 0.0 -------- Multilevel TCCTGGGA consensus A A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr1:113361851-113361931 67 1.83e-05 GGCCACTTCC TCCTGGGA CCCAGC chr19:17792468-17792548 50 1.83e-05 CCTCCATTAA TCCTGGGA GGCTGAGCTA chr7:99104176-99104256 13 1.83e-05 TCTTTTGTTC TCCTGGGA TTAGGTACCC chr21:18983988-18984068 33 1.83e-05 GGTGACGTCA TCCTGGGA CCTCGTCACC chr11:95440200-95440280 10 1.83e-05 TTTTTATTC TCCTGGGA AGCAGATGAC chr2:9310987-9311067 42 1.83e-05 cccaaattgc tcctggga atgacatcac chr16:57096458-57096538 49 3.31e-05 accccgactt tcctggaa actggacgtt chr3:160473048-160473128 6 3.31e-05 ATAGT TCCTGGAA AACCAACGCT chr10:43474927-43475007 35 3.31e-05 ACGTCATAGT TCCTGGAA ACAGAACTGT chr20:354245-354325 20 5.12e-05 ctcatctgtc tccaggga taaaaatagc chr16:57770811-57770891 14 5.12e-05 GTCTTGGTGA TCCAGGGA GCAACAGCTC chr18:497080-497160 52 5.12e-05 TACTTGTGAC TCCAGGGA TGGAGGAAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:113361851-113361931 1.8e-05 66_[+5]_6 chr19:17792468-17792548 1.8e-05 49_[+5]_23 chr7:99104176-99104256 1.8e-05 12_[+5]_60 chr21:18983988-18984068 1.8e-05 32_[+5]_40 chr11:95440200-95440280 1.8e-05 9_[+5]_63 chr2:9310987-9311067 1.8e-05 41_[+5]_31 chr16:57096458-57096538 3.3e-05 48_[+5]_24 chr3:160473048-160473128 3.3e-05 5_[+5]_67 chr10:43474927-43475007 3.3e-05 34_[+5]_38 chr20:354245-354325 5.1e-05 19_[+5]_53 chr16:57770811-57770891 5.1e-05 13_[+5]_59 chr18:497080-497160 5.1e-05 51_[+5]_21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCTGGGA width=8 seqs=12 chr1:113361851-113361931 ( 67) TCCTGGGA 1 chr19:17792468-17792548 ( 50) TCCTGGGA 1 chr7:99104176-99104256 ( 13) TCCTGGGA 1 chr21:18983988-18984068 ( 33) TCCTGGGA 1 chr11:95440200-95440280 ( 10) TCCTGGGA 1 chr2:9310987-9311067 ( 42) TCCTGGGA 1 chr16:57096458-57096538 ( 49) TCCTGGAA 1 chr3:160473048-160473128 ( 6) TCCTGGAA 1 chr10:43474927-43475007 ( 35) TCCTGGAA 1 chr20:354245-354325 ( 20) TCCAGGGA 1 chr16:57770811-57770891 ( 14) TCCAGGGA 1 chr18:497080-497160 ( 52) TCCAGGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 10.2284 E= 5.7e+003 -1023 -1023 -1023 214 -1023 188 -1023 -1023 -1023 188 -1023 -1023 16 -1023 -1023 172 -1023 -1023 185 -1023 -1023 -1023 185 -1023 16 -1023 143 -1023 216 -1023 -1023 -1023 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 12 E= 5.7e+003 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.000000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.250000 0.000000 0.750000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCTGGGA MEME-5 regular expression -------------------------------------------------------------------------------- TCC[TA]GG[GA]A -------------------------------------------------------------------------------- Time 18.17 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:14430869-14430949 2.28e-02 40_[+1(1.48e-05)]_32 chr21:43099267-43099347 2.41e-03 50_[+1(1.48e-05)]_22 chr8:41862935-41863015 3.88e-02 25_[+1(5.12e-05)]_47 chr12:56224442-56224522 2.73e-01 80 chr14:68086439-68086519 2.60e-02 25_[+1(1.48e-05)]_47 chr10:111981684-11198176 1.73e-01 27_[+1(6.33e-05)]_45 chr4:75375236-75375316 8.55e-02 28_[+1(5.12e-05)]_44 chr21:46001993-46002073 3.29e-04 6_[+4(8.06e-05)]_7_[+1(1.48e-05)]_\ 51 chr1:15433174-15433254 3.39e-02 23_[+1(1.48e-05)]_49 chr1:155830410-155830490 7.33e-02 50_[+1(6.33e-05)]_22 chr19:51506073-51506153 3.92e-03 50_[+1(1.48e-05)]_22 chr12:124675621-12467570 1.19e-02 61_[+1(3.90e-05)]_11 chr2:179107138-179107218 4.67e-02 48_[+1(1.48e-05)]_24 chr1:1624234-1624314 7.14e-02 80 chr12:110481112-11048119 2.38e-04 44_[+1(2.67e-05)]_14_[+2(6.34e-06)]_\ 6 chrX:54666190-54666270 1.87e-02 27_[+1(5.12e-05)]_45 chrX:152419847-152419927 1.98e-01 80 chr3:107941305-107941385 3.21e-02 39_[+1(1.48e-05)]_33 chr17:53573915-53573995 1.11e-02 50_[+1(5.12e-05)]_22 chr8:17013352-17013432 6.20e-02 35_[+3(4.28e-05)]_37 chr6:83073355-83073435 3.92e-02 3_[+4(2.22e-05)]_69 chr15:45748907-45748987 8.25e-03 22_[+1(1.48e-05)]_50 chr7:104909617-104909697 2.82e-02 3_[+2(1.28e-05)]_69 chrX:43513975-43514055 3.76e-01 80 chr19:50268843-50268923 9.48e-03 80 chr10:43474927-43475007 4.97e-05 22_[+1(1.48e-05)]_4_[+5(3.31e-05)]_\ 38 chr12:122098053-12209813 5.33e-03 63_[+1(1.48e-05)]_9 chr11:9286969-9287049 3.90e-03 80 chr7:44152353-44152433 9.96e-01 80 chr19:46503103-46503183 1.40e-03 4_[+4(4.46e-05)]_32_[+1(1.48e-05)]_\ 28 chrX:48397740-48397820 3.96e-02 49_[+1(1.48e-05)]_23 chr6:18035122-18035202 2.59e-02 24_[+1(1.48e-05)]_48 chr6:149492288-149492368 7.57e-03 51_[+1(1.48e-05)]_21 chr19:41104212-41104292 9.63e-01 80 chr7:5492773-5492853 5.16e-05 23_[+3(1.43e-05)]_20_[+1(1.48e-05)]_\ 21 chr1:43510614-43510694 4.15e-04 25_[+1(1.48e-05)]_6_[+4(2.22e-05)]_\ 33 chr14:93821385-93821465 1.35e-02 47_[+1(1.48e-05)]_25 chr10:99078869-99078949 5.96e-01 80 chr17:74537082-74537162 1.42e-02 22_[+1(2.67e-05)]_50 chr19:996501-996581 1.18e-01 48_[+1(1.48e-05)]_24 chr11:129872266-12987234 9.61e-02 24_[+4(2.22e-05)]_48 chr17:7835439-7835519 7.12e-02 50_[+1(1.48e-05)]_22 chr14:91294528-91294608 2.28e-04 28_[+3(1.43e-05)]_15_[+1(7.84e-05)]_\ 21 chr3:48701506-48701586 4.88e-02 64_[+1(2.67e-05)]_8 chr10:71992303-71992383 8.13e-03 49_[+1(1.48e-05)]_23 chr9:71788931-71789011 1.01e-01 24_[+4(6.27e-05)]_48 chr1:43609282-43609362 3.13e-02 49_[+4(6.27e-05)]_23 chr1:28099514-28099594 7.77e-02 21_[+1(1.48e-05)]_51 chr8:23409026-23409106 6.72e-05 22_[+1(1.48e-05)]_39_[+2(6.34e-06)]_\ 3 chr3:160473048-160473128 2.98e-02 5_[+5(3.31e-05)]_67 chr16:11222763-11222843 1.21e-01 26_[+1(6.33e-05)]_46 chr1:39624463-39624543 4.40e-02 25_[+1(1.48e-05)]_47 chr14:52118250-52118330 9.73e-01 80 chr3:177766662-177766742 9.50e-02 26_[+1(2.67e-05)]_46 chr14:39901484-39901564 1.00e+00 80 chr3:72201904-72201984 2.70e-03 54_[+4(2.22e-05)]_18 chr15:100243964-10024404 1.72e-01 45_[+1(7.84e-05)]_27 chr16:4511388-4511468 9.90e-02 80 chrX:39612780-39612860 2.78e-03 53_[+1(1.48e-05)]_19 chr22:39097051-39097131 6.40e-03 10_[+1(5.12e-05)]_3_[+1(1.48e-05)]_\ 51 chr18:77866838-77866918 7.48e-02 50_[+1(1.48e-05)]_22 chr19:7829134-7829214 1.09e-02 41_[+1(6.33e-05)]_31 chr11:72525220-72525300 9.49e-02 80 chr7:2393976-2394056 1.29e-01 80 chr9:135285403-135285483 2.12e-01 80 chr7:66691478-66691558 4.40e-02 30_[+1(3.90e-05)]_42 chr17:31082197-31082277 2.13e-02 25_[+1(2.67e-05)]_47 chrX:47880858-47880938 4.00e-01 80 chr19:47617025-47617105 1.10e-03 22_[+1(1.48e-05)]_17_[+1(3.90e-05)]_\ 25 chr2:86947251-86947331 9.96e-01 80 chr11:125933025-12593310 4.54e-01 80 chr2:44314514-44314594 3.77e-02 23_[+1(1.48e-05)]_49 chr5:89854406-89854486 7.71e-01 80 chr18:497080-497160 5.25e-04 24_[+1(3.90e-05)]_19_[+5(5.12e-05)]_\ 21 chr3:50359010-50359090 9.54e-01 80 chr12:64616314-64616394 5.45e-02 51_[+1(1.48e-05)]_8_[+1(1.48e-05)]_\ 5 chr7:116660192-116660272 5.38e-02 44_[+1(1.48e-05)]_28 chr12:56440975-56441055 1.76e-03 1_[+2(2.06e-05)]_32_[+1(3.90e-05)]_\ 31 chr16:70099992-70100072 1.27e-01 80 chr19:2962176-2962256 1.79e-02 22_[+1(1.48e-05)]_11_[+1(6.33e-05)]_\ 31 chr5:141150735-141150815 1.17e-04 20_[+2(1.28e-05)]_4_[+1(1.48e-05)]_\ 40 chr15:72766082-72766162 2.39e-02 22_[+1(1.48e-05)]_50 chr1:208525264-208525344 9.91e-02 22_[+1(5.12e-05)]_50 chr14:90920806-90920886 1.29e-03 36_[+3(1.43e-05)]_36 chr14:57046352-57046432 1.49e-01 80 chr19:17666298-17666378 1.38e-02 50_[+1(1.48e-05)]_22 chr11:1593556-1593636 3.50e-04 11_[+1(1.48e-05)]_4_[+3(1.43e-05)]_\ 24_[+1(1.48e-05)]_17 chr18:72163387-72163467 5.27e-02 24_[+1(1.48e-05)]_48 chrX:47077906-47077986 4.89e-01 80 chr8:107669895-107669975 2.32e-03 19_[+5(6.58e-05)]_53 chr11:1585908-1585988 6.29e-05 10_[+1(1.48e-05)]_4_[+3(1.43e-05)]_\ 50 chr1:183573552-183573632 6.32e-02 26_[+1(1.48e-05)]_46 chr1:1677699-1677779 5.18e-01 80 chr1:154909555-154909635 2.63e-04 45_[+2(6.34e-06)]_27 chr6:110501015-110501095 5.33e-01 80 chr19:49078095-49078175 3.49e-02 26_[+1(2.67e-05)]_46 chr13:76112093-76112173 5.24e-03 33_[+2(2.06e-05)]_39 chr11:77185395-77185475 1.46e-01 51_[+1(1.48e-05)]_21 chr14:60715689-60715769 4.42e-02 60_[+1(1.48e-05)]_12 chr2:9310987-9311067 6.40e-04 41_[+5(1.83e-05)]_1_[+1(2.67e-05)]_\ 22 chr9:100395097-100395177 2.21e-02 22_[+1(1.48e-05)]_50 chr12:7013852-7013932 6.12e-02 31_[+1(5.12e-05)]_41 chr1:201140724-201140804 6.82e-02 45_[+1(1.48e-05)]_27 chr3:15965295-15965375 7.25e-02 40_[+1(1.48e-05)]_6_[+1(3.90e-05)]_\ 18 chr6:136647264-136647344 4.67e-03 48_[+1(1.48e-05)]_24 chr6:43777230-43777310 4.85e-03 25_[+1(1.48e-05)]_47 chr11:95440200-95440280 1.04e-03 9_[+5(1.83e-05)]_6_[+1(2.67e-05)]_\ 49 chr10:70716919-70716999 6.52e-02 26_[+1(5.12e-05)]_46 chr1:200860482-200860562 9.22e-01 80 chr9:15511073-15511153 2.61e-01 80 chr13:76123716-76123796 8.62e-02 80 chr1:84464927-84465007 1.45e-01 80 chr4:13486106-13486186 2.77e-01 80 chr21:18983988-18984068 3.75e-05 24_[+1(1.48e-05)]_[+5(1.83e-05)]_40 chr22:32340286-32340366 5.08e-02 65_[+1(1.48e-05)]_7 chr21:45437668-45437748 6.14e-02 23_[+1(3.90e-05)]_49 chr7:139900169-139900249 2.54e-03 46_[+1(1.48e-05)]_17_[+3(9.23e-05)]_\ 1 chr19:42772521-42772601 6.75e-01 80 chr2:88899771-88899851 4.67e-02 33_[+1(2.67e-05)]_39 chr7:120625356-120625436 4.41e-03 50_[+1(1.48e-05)]_22 chr22:39052490-39052570 3.33e-01 80 chr17:43229446-43229526 1.87e-02 50_[+1(1.48e-05)]_22 chr17:76554586-76554666 8.63e-02 9_[+1(2.67e-05)]_14_[+1(2.67e-05)]_\ 14_[+1(2.67e-05)]_19 chr16:15068684-15068764 2.92e-01 80 chr3:156530480-156530560 5.61e-02 22_[+1(5.12e-05)]_50 chr5:14264879-14264959 3.98e-02 31_[+1(1.48e-05)]_41 chr10:99094568-99094648 2.12e-02 70_[+4(2.22e-05)]_2 chr2:120301848-120301928 4.16e-02 80 chr5:173345043-173345123 1.94e-01 80 chrX:118827263-118827343 5.56e-01 80 chr18:43996813-43996893 2.47e-02 13_[+1(3.90e-05)]_59 chr3:182727679-182727759 6.19e-04 38_[+1(1.48e-05)]_34 chr8:50042502-50042582 5.76e-02 42_[+1(9.81e-05)]_[+1(6.33e-05)]_22 chr19:49939681-49939761 9.68e-03 52_[+1(1.48e-05)]_20 chrX:133941134-133941214 5.38e-02 25_[+1(1.48e-05)]_47 chr9:130538761-130538841 7.53e-01 80 chr6:41735044-41735124 8.28e-02 36_[+1(6.33e-05)]_36 chr6:139456064-139456144 6.52e-03 12_[+1(1.48e-05)]_29_[+1(1.48e-05)]_\ 23 chr11:108535537-10853561 6.07e-02 19_[+1(1.48e-05)]_53 chr17:43306517-43306597 2.73e-01 80 chr12:122028222-12202830 2.18e-01 80 chr1:11539015-11539095 3.99e-01 80 chr4:185760132-185760212 1.96e-03 48_[+1(1.48e-05)]_24 chr14:45603548-45603628 7.90e-01 80 chr9:86323809-86323889 5.59e-03 48_[+1(1.48e-05)]_24 chr12:56521667-56521747 4.10e-02 21_[+1(1.48e-05)]_51 chr6:27832916-27832996 7.08e-03 25_[+1(1.48e-05)]_47 chr22:18540548-18540628 1.18e-02 48_[+1(1.48e-05)]_24 chr17:7589701-7589781 6.97e-01 80 chr1:22380077-22380157 4.44e-02 49_[+1(6.33e-05)]_23 chr6:43538920-43539000 8.60e-04 49_[+1(2.67e-05)]_12_[+2(2.86e-05)]_\ 3 chr1:150602115-150602195 9.79e-02 29_[+1(5.12e-05)]_43 chr16:57770811-57770891 4.69e-04 13_[+5(5.12e-05)]_30_[+1(1.48e-05)]_\ 21 chr7:2595224-2595304 9.52e-02 21_[+4(4.46e-05)]_51 chr19:49164460-49164540 8.43e-03 51_[+1(1.48e-05)]_21 chr1:6052172-6052252 7.89e-01 80 chr7:154794935-154795015 5.49e-01 80 chr5:179453517-179453597 1.07e-02 22_[+1(1.48e-05)]_50 chr5:175964846-175964926 2.96e-02 23_[+1(1.48e-05)]_24_[+1(2.67e-05)]_\ 17 chr19:55574651-55574731 2.85e-02 47_[+1(1.48e-05)]_25 chr12:25104836-25104916 9.72e-02 80 chrX:19002612-19002692 1.24e-01 39_[+3(7.80e-05)]_33 chr9:100709505-100709585 7.27e-02 48_[+1(6.33e-05)]_24 chr3:150089743-150089823 1.35e-03 9_[+3(1.43e-05)]_15_[+1(3.90e-05)]_\ 40 chr14:39736406-39736486 5.10e-01 80 chr5:150326204-150326284 5.40e-01 80 chr4:42659367-42659447 2.78e-01 80 chr20:32581532-32581612 1.32e-01 80 chr17:17140615-17140695 7.97e-01 80 chr19:49653725-49653805 9.21e-01 80 chr8:107282274-107282354 9.94e-01 80 chr11:12695821-12695901 6.24e-02 26_[+1(1.48e-05)]_46 chr1:1935264-1935344 9.39e-01 80 chr22:42228706-42228786 1.75e-04 14_[+1(5.12e-05)]_16_[+4(4.46e-05)]_\ 34 chr14:75348502-75348582 6.44e-01 80 chr11:65189685-65189765 7.07e-02 39_[+1(1.48e-05)]_33 chr8:1706667-1706747 1.57e-02 26_[+1(1.48e-05)]_46 chr7:99104176-99104256 3.33e-03 12_[+5(1.83e-05)]_60 chrX:53024924-53025004 6.58e-01 80 chr12:106696388-10669646 9.43e-01 80 chr17:13319499-13319579 2.45e-02 58_[+1(3.90e-05)]_14 chr1:155658697-155658777 9.16e-01 80 chr19:17792468-17792548 5.92e-05 28_[+1(1.48e-05)]_13_[+5(1.83e-05)]_\ 23 chr3:195782810-195782890 3.36e-01 80 chr12:100660873-10066095 2.57e-02 50_[+1(1.48e-05)]_22 chr14:50053197-50053277 1.96e-03 10_[+2(2.86e-05)]_31_[+1(1.48e-05)]_\ 23 chr5:64331581-64331661 1.25e-02 49_[+1(1.48e-05)]_23 chr2:206767295-206767375 1.08e-01 21_[+1(3.90e-05)]_51 chr2:87303607-87303687 9.53e-01 80 chr10:112201576-11220165 8.19e-01 80 chr16:87989996-87990076 1.14e-01 22_[+1(2.67e-05)]_50 chr19:6737389-6737469 2.89e-01 80 chr20:354245-354325 3.63e-04 19_[+5(5.12e-05)]_43_[+1(5.12e-05)]_\ 2 chr22:38910708-38910788 1.34e-02 49_[+1(1.48e-05)]_23 chr1:1790228-1790308 1.04e-03 25_[+1(1.48e-05)]_36_[+2(6.24e-05)]_\ 3 chr9:133327652-133327732 6.38e-02 49_[+1(1.48e-05)]_23 chr10:16993231-16993311 6.96e-02 35_[+1(2.67e-05)]_37 chr19:50179822-50179902 7.86e-01 80 chr20:42219400-42219480 1.11e-01 7_[+2(6.89e-05)]_65 chr17:29421806-29421886 4.05e-05 22_[+1(1.48e-05)]_3_[+4(2.22e-05)]_\ 39 chr19:42806716-42806796 9.07e-01 80 chr21:19191802-19191882 2.48e-01 80 chr1:19229157-19229237 4.79e-02 25_[+2(3.50e-05)]_47 chr15:71544678-71544758 2.72e-01 80 chr18:2875662-2875742 1.87e-02 45_[+1(3.90e-05)]_27 chr1:113361851-113361931 4.76e-03 26_[+1(5.12e-05)]_32_[+5(1.83e-05)]_\ 6 chr10:97026584-97026664 1.23e-02 80 chr1:2144062-2144142 1.41e-01 80 chrX:155111413-155111493 4.06e-02 50_[+1(1.48e-05)]_22 chrX:47420758-47420838 6.09e-01 80 chr16:89766704-89766784 4.45e-02 46_[+1(1.48e-05)]_26 chr7:135595449-135595529 1.01e-03 37_[+2(3.50e-05)]_[+1(1.48e-05)]_27 chr20:2082944-2083024 8.66e-01 80 chr3:99721801-99721881 2.40e-02 45_[+1(5.12e-05)]_27 chr6:150255535-150255615 6.15e-02 7_[+1(2.67e-05)]_18_[+1(2.67e-05)]_\ 18_[+1(2.67e-05)]_13 chrX:54070928-54071008 3.41e-02 23_[+1(1.48e-05)]_49 chr3:186314813-186314893 6.28e-02 46_[+1(3.90e-05)]_26 chr19:42901111-42901191 2.02e-04 16_[+1(1.48e-05)]_12_[+3(1.43e-05)]_\ 36 chr11:45921466-45921546 9.03e-01 80 chr12:117257339-11725741 6.94e-02 49_[+4(2.22e-05)]_23 chrX:118824911-118824991 2.04e-02 25_[+1(1.48e-05)]_47 chr19:45970908-45970988 1.30e-02 20_[+1(1.48e-05)]_52 chr3:48514492-48514572 3.86e-05 29_[+2(2.06e-05)]_16_[+1(1.48e-05)]_\ 19 chr11:46907944-46908024 3.80e-05 44_[+3(7.80e-05)]_4_[+1(2.67e-05)]_\ 16 chrX:47479302-47479382 8.66e-01 80 chr15:85458329-85458409 2.89e-03 25_[+4(6.27e-05)]_6_[+1(3.90e-05)]_\ 33 chr14:21944621-21944701 2.22e-01 80 chr10:127511947-12751202 3.46e-01 80 chr20:814332-814412 5.61e-01 80 chr2:74781531-74781611 2.87e-02 8_[+1(3.90e-05)]_12_[+1(1.48e-05)]_\ 11_[+1(1.48e-05)]_25 chr6:26924043-26924123 7.72e-01 80 chr7:21985624-21985704 8.64e-01 80 chr1:53168746-53168826 8.72e-01 80 chr18:76829114-76829194 2.23e-02 25_[+1(1.48e-05)]_47 chr19:55678302-55678382 2.61e-01 80 chr16:57096458-57096538 7.31e-04 13_[+1(3.90e-05)]_27_[+5(3.31e-05)]_\ 24 chr19:16187139-16187219 4.13e-01 80 chr19:50979544-50979624 3.44e-04 13_[+1(1.48e-05)]_33_[+4(4.46e-05)]_\ 18 chr11:129872554-12987263 8.10e-01 80 chr7:127484890-127484970 1.08e-02 11_[+1(7.84e-05)]_61 chr6:3177116-3177196 5.90e-02 23_[+1(6.33e-05)]_49 chr11:85913829-85913909 1.09e-01 80 chr8:38644587-38644667 9.92e-01 80 chr16:27561308-27561388 4.84e-02 46_[+1(1.48e-05)]_26 chr2:152475974-152476054 6.30e-02 25_[+1(3.90e-05)]_47 chr19:48281744-48281824 1.53e-01 80 chr8:130704710-130704790 3.50e-04 23_[+1(2.67e-05)]_49 chrX:48858772-48858852 6.88e-01 80 chr11:61717168-61717248 7.53e-04 [+3(1.43e-05)]_18_[+1(3.90e-05)]_4_\ [+3(1.43e-05)]_34 chr3:52321993-52322073 6.30e-04 13_[+3(4.28e-05)]_26_[+1(1.48e-05)]_\ 25 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c17n10.farnam.hpc.yale.internal ********************************************************************************