******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/ATF3.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr3:52444008-52444088 1.0000 80 chr12:54332412-54332492 1.0000 80 chr17:46688348-46688428 1.0000 80 chr14:92573020-92573100 1.0000 80 chr16:86588781-86588861 1.0000 80 chr17:78075277-78075357 1.0000 80 chr12:121342188-12134226 1.0000 80 chr6:52463178-52463258 1.0000 80 chr14:24769009-24769089 1.0000 80 chr6:158653157-158653237 1.0000 80 chr10:113943506-11394358 1.0000 80 chr16:58718636-58718716 1.0000 80 chrX:136520464-136520544 1.0000 80 chrX:101975580-101975660 1.0000 80 chr1:15296788-15296868 1.0000 80 chr2:240964750-240964830 1.0000 80 chr17:4699361-4699441 1.0000 80 chr13:50159667-50159747 1.0000 80 chr2:110962559-110962639 1.0000 80 chr1:15930148-15930228 1.0000 80 chr2:33141309-33141389 1.0000 80 chr16:2570292-2570372 1.0000 80 chr7:45808632-45808712 1.0000 80 chr1:173446149-173446229 1.0000 80 chr2:68290109-68290189 1.0000 80 chr2:95705316-95705396 1.0000 80 chr9:71394876-71394956 1.0000 80 chr2:220042891-220042971 1.0000 80 chr9:135753653-135753733 1.0000 80 chr22:26879772-26879852 1.0000 80 chr17:8152575-8152655 1.0000 80 chr16:5083887-5083967 1.0000 80 chr17:17380283-17380363 1.0000 80 chr11:506796-506876 1.0000 80 chr17:72511031-72511111 1.0000 80 chr11:777496-777576 1.0000 80 chr1:4124319-4124399 1.0000 80 chr2:44001128-44001208 1.0000 80 chr9:140009128-140009208 1.0000 80 chr3:158519777-158519857 1.0000 80 chr21:47442566-47442646 1.0000 80 chr3:51428570-51428650 1.0000 80 chr17:73267318-73267398 1.0000 80 chr5:172410724-172410804 1.0000 80 chr19:36103594-36103674 1.0000 80 chr22:46431899-46431979 1.0000 80 chr17:38083851-38083931 1.0000 80 chr7:23145262-23145342 1.0000 80 chr4:8442468-8442548 1.0000 80 chr5:1345226-1345306 1.0000 80 chr22:50683418-50683498 1.0000 80 chr1:70671262-70671342 1.0000 80 chr16:71879828-71879908 1.0000 80 chr4:119512803-119512883 1.0000 80 chr4:47465661-47465741 1.0000 80 chr6:126661223-126661303 1.0000 80 chr19:40324843-40324923 1.0000 80 chr4:1513542-1513622 1.0000 80 chr3:112280779-112280859 1.0000 80 chr8:104033218-104033298 1.0000 80 chr9:6015626-6015706 1.0000 80 chr17:40719046-40719126 1.0000 80 chr11:66112542-66112622 1.0000 80 chr16:1525028-1525108 1.0000 80 chr20:57463869-57463949 1.0000 80 chr10:51827570-51827650 1.0000 80 chr4:120375812-120375892 1.0000 80 chr20:44420516-44420596 1.0000 80 chr4:7075422-7075502 1.0000 80 chr17:685530-685610 1.0000 80 chr1:39325526-39325606 1.0000 80 chr7:102036789-102036869 1.0000 80 chr10:127577762-12757784 1.0000 80 chr10:98561454-98561534 1.0000 80 chr17:80455093-80455173 1.0000 80 chr1:1550718-1550798 1.0000 80 chr21:45937269-45937349 1.0000 80 chr19:16683293-16683373 1.0000 80 chr14:20923305-20923385 1.0000 80 chr15:40857347-40857427 1.0000 80 chr17:45235581-45235661 1.0000 80 chr11:126081605-12608168 1.0000 80 chr3:46792413-46792493 1.0000 80 chr17:33895033-33895113 1.0000 80 chr1:89149860-89149940 1.0000 80 chr16:58664403-58664483 1.0000 80 chr19:18133090-18133170 1.0000 80 chr15:50978996-50979076 1.0000 80 chr2:242577020-242577100 1.0000 80 chr16:67143819-67143899 1.0000 80 chr4:57253621-57253701 1.0000 80 chr3:180707514-180707594 1.0000 80 chr1:224180291-224180371 1.0000 80 chr12:131678807-13167888 1.0000 80 chr19:1275783-1275863 1.0000 80 chr19:32836464-32836544 1.0000 80 chr20:48746704-48746784 1.0000 80 chrX:48980188-48980268 1.0000 80 chr17:79519371-79519451 1.0000 80 chr4:153457345-153457425 1.0000 80 chr7:150759522-150759602 1.0000 80 chr16:4897373-4897453 1.0000 80 chr16:9233909-9233989 1.0000 80 chr21:38738870-38738950 1.0000 80 chr13:45563620-45563700 1.0000 80 chr19:59084902-59084982 1.0000 80 chr12:65153184-65153264 1.0000 80 chr1:228296951-228297031 1.0000 80 chr15:99408693-99408773 1.0000 80 chrX:101914782-101914862 1.0000 80 chr17:8095548-8095628 1.0000 80 chr11:67195865-67195945 1.0000 80 chr18:77439744-77439824 1.0000 80 chr6:43027158-43027238 1.0000 80 chr19:51373846-51373926 1.0000 80 chr19:36036446-36036526 1.0000 80 chr19:36119917-36119997 1.0000 80 chr8:145743294-145743374 1.0000 80 chr1:28559502-28559582 1.0000 80 chr11:75525836-75525916 1.0000 80 chr17:1627987-1628067 1.0000 80 chr1:11866202-11866282 1.0000 80 chr16:88923465-88923545 1.0000 80 chr9:6757894-6757974 1.0000 80 chr19:2427888-2427968 1.0000 80 chrX:347679-347759 1.0000 80 chr4:123073406-123073486 1.0000 80 chr22:23063990-23064070 1.0000 80 chr6:158981095-158981175 1.0000 80 chr15:79165123-79165203 1.0000 80 chr19:5340953-5341033 1.0000 80 chr3:48488047-48488127 1.0000 80 chr1:44440527-44440607 1.0000 80 chr7:55433988-55434068 1.0000 80 chr1:12156154-12156234 1.0000 80 chr12:108956309-10895638 1.0000 80 chr11:118307006-11830708 1.0000 80 chr9:94877695-94877775 1.0000 80 chr11:61500999-61501079 1.0000 80 chr16:69440963-69441043 1.0000 80 chr15:73925859-73925939 1.0000 80 chr7:56019534-56019614 1.0000 80 chr7:1177962-1178042 1.0000 80 chr9:108320445-108320525 1.0000 80 chr15:44084221-44084301 1.0000 80 chr7:915969-916049 1.0000 80 chr7:93633660-93633740 1.0000 80 chr3:184032273-184032353 1.0000 80 chr12:114184974-11418505 1.0000 80 chr14:99947687-99947767 1.0000 80 chrX:55744129-55744209 1.0000 80 chr12:54553049-54553129 1.0000 80 chr22:22711744-22711824 1.0000 80 chr13:49684322-49684402 1.0000 80 chr17:3539951-3540031 1.0000 80 chr16:67515077-67515157 1.0000 80 chr1:52831833-52831913 1.0000 80 chr16:88772841-88772921 1.0000 80 chr2:85788612-85788692 1.0000 80 chr8:144623672-144623752 1.0000 80 chr1:243265030-243265110 1.0000 80 chr19:7587418-7587498 1.0000 80 chr7:4815203-4815283 1.0000 80 chr9:97488924-97489004 1.0000 80 chr9:117349945-117350025 1.0000 80 chr16:67596216-67596296 1.0000 80 chr21:46238012-46238092 1.0000 80 chr1:9489021-9489101 1.0000 80 chr6:84937339-84937419 1.0000 80 chr8:126103991-126104071 1.0000 80 chr14:20929769-20929849 1.0000 80 chr6:44225034-44225114 1.0000 80 chr16:84178734-84178814 1.0000 80 chr19:49458034-49458114 1.0000 80 chr7:73097885-73097965 1.0000 80 chr16:89766689-89766769 1.0000 80 chr2:96068377-96068457 1.0000 80 chr16:790981-791061 1.0000 80 chr14:32030564-32030644 1.0000 80 chr1:16893154-16893234 1.0000 80 chrX:70288314-70288394 1.0000 80 chr19:47759736-47759816 1.0000 80 chr5:112073475-112073555 1.0000 80 chr11:61684986-61685066 1.0000 80 chr7:1199800-1199880 1.0000 80 chr4:1340750-1340830 1.0000 80 chr20:37590793-37590873 1.0000 80 chr10:102027368-10202744 1.0000 80 chr9:140083018-140083098 1.0000 80 chr15:73076086-73076166 1.0000 80 chr2:29093163-29093243 1.0000 80 chr16:67260959-67261039 1.0000 80 chr11:116969245-11696932 1.0000 80 chr16:33569491-33569571 1.0000 80 chr5:141392574-141392654 1.0000 80 chr16:90039167-90039247 1.0000 80 chr1:210001280-210001360 1.0000 80 chr9:139760838-139760918 1.0000 80 chr15:63481567-63481647 1.0000 80 chr19:17721344-17721424 1.0000 80 chr9:131709862-131709942 1.0000 80 chr17:7232736-7232816 1.0000 80 chr3:122512637-122512717 1.0000 80 chr16:2021990-2022070 1.0000 80 chr9:140411378-140411458 1.0000 80 chr17:79296783-79296863 1.0000 80 chr12:112856673-11285675 1.0000 80 chr5:150827082-150827162 1.0000 80 chr9:99179673-99179753 1.0000 80 chr9:33290395-33290475 1.0000 80 chr21:45209339-45209419 1.0000 80 chr3:53164429-53164509 1.0000 80 chr22:23081988-23082068 1.0000 80 chr3:5562026-5562106 1.0000 80 chr15:72668351-72668431 1.0000 80 chr18:13726612-13726692 1.0000 80 chr12:120755516-12075559 1.0000 80 chr13:113951360-11395144 1.0000 80 chr10:31607953-31608033 1.0000 80 chr3:33839999-33840079 1.0000 80 chr1:21023482-21023562 1.0000 80 chr1:36107109-36107189 1.0000 80 chr19:59086758-59086838 1.0000 80 chr12:132628889-13262896 1.0000 80 chr11:65255196-65255276 1.0000 80 chr19:7694422-7694502 1.0000 80 chr17:33914212-33914292 1.0000 80 chr1:1510252-1510332 1.0000 80 chr17:1733185-1733265 1.0000 80 chr10:46222591-46222671 1.0000 80 chr16:86939035-86939115 1.0000 80 chr19:30097140-30097220 1.0000 80 chr16:28503395-28503475 1.0000 80 chr20:23338736-23338816 1.0000 80 chr3:9143085-9143165 1.0000 80 chr8:145692227-145692307 1.0000 80 chr11:60609482-60609562 1.0000 80 chr3:16306450-16306530 1.0000 80 chr1:29557437-29557517 1.0000 80 chr2:26987114-26987194 1.0000 80 chr11:118938424-11893850 1.0000 80 chr19:54619061-54619141 1.0000 80 chr10:46090334-46090414 1.0000 80 chr16:69796140-69796220 1.0000 80 chr9:139844574-139844654 1.0000 80 chr17:6939079-6939159 1.0000 80 chr12:120884161-12088424 1.0000 80 chr12:28343257-28343337 1.0000 80 chr12:1058957-1059037 1.0000 80 chr1:11986462-11986542 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_ATF3/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/ATF3.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.163 C 0.329 G 0.345 T 0.163 Background letter frequencies (from file dataset with add-one prior applied): A 0.163 C 0.329 G 0.345 T 0.163 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF TCACGTGA MEME-1 width = 8 sites = 178 llr = 1381 E-value = 3.2e-179 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 Description -------------------------------------------------------------------------------- Simplified A ::a:1::6 pos.-specific C 17:9::21 probability G 13::9:72 matrix T 8::::a:1 bits 2.6 * * 2.4 * * 2.1 * * 1.8 * * Relative 1.6 * * * Entropy 1.3 * **** (11.2 bits) 1.0 * **** 0.8 * **** * 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TCACGTGA consensus G CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:46090334-46090414 28 9.09e-06 GAGTGGCAGG TCACGTGA CGCGGGCGTC chr11:118938424-11893850 70 9.09e-06 CTGGCTCAGC TCACGTGA CAA chr2:26987114-26987194 10 9.09e-06 CAGGAGGGG TCACGTGA CGCCCGGCCC chr3:9143085-9143165 43 9.09e-06 cccggtgtgc tcacgtga cccgtgctgg chr10:46222591-46222671 48 9.09e-06 GCGGGTTCTG TCACGTGA CATCAGGTCA chr3:33839999-33840079 17 9.09e-06 CGCGACACCT TCACGTGA CCGCGGACAG chr15:72668351-72668431 47 9.09e-06 TATCGGCGAA TCACGTGA CCAGAGGCGG chr9:99179673-99179753 35 9.09e-06 CTCCCGCCTG TCACGTGA CAGGCCCCCC chr5:150827082-150827162 73 9.09e-06 GGCGGTGGGA TCACGTGA chr17:79296783-79296863 31 9.09e-06 TCAAACCCAG TCACGTGA TCAGAGCAGG chr3:122512637-122512717 49 9.09e-06 CACGTGGAGG TCACGTGA CGGATGCTGG chr9:131709862-131709942 38 9.09e-06 CGCGGCAACG TCACGTGA CGAAATCCCC chr19:49458034-49458114 4 9.09e-06 CGG TCACGTGA CCCGGCGGCG chr16:84178734-84178814 45 9.09e-06 CGCCGCGCCC TCACGTGA CCCGCGTACG chr6:44225034-44225114 71 9.09e-06 GGGGGCTCGG TCACGTGA GC chr9:117349945-117350025 45 9.09e-06 CGCTGTGCGG TCACGTGA CAACGGGGGC chr7:4815203-4815283 45 9.09e-06 GCCGCTGCGC TCACGTGA CGCGGTCCCG chr19:7587418-7587498 50 9.09e-06 CCAGAGGCGG TCACGTGA GGGGCTCTGG chr16:67515077-67515157 36 9.09e-06 CGCAAGCGCC TCACGTGA CCATAAGGGG chr13:49684322-49684402 58 9.09e-06 TCACTGCAGG TCACGTGA TGACTGTCAC chrX:55744129-55744209 27 9.09e-06 GTAGCGGCAG TCACGTGA CAGACTCCGG chr19:2427888-2427968 60 9.09e-06 CCCGGTCGCA TCACGTGA CGAAGAGTCA chr9:6757894-6757974 47 9.09e-06 GCCCCAGCGG TCACGTGA CGGCGCGCGC chr16:88923465-88923545 58 9.09e-06 CAGCGGCGGG TCACGTGA CGCGGTGCCT chr1:11866202-11866282 48 9.09e-06 CCGGGGCCAG TCACGTGA GGCGCAGATC chr1:28559502-28559582 53 9.09e-06 AGGCGTCGCC TCACGTGA TTCTTACAGG chr12:65153184-65153264 62 9.09e-06 CGCTGCGCGG TCACGTGA CGGCCGGCGT chr21:38738870-38738950 25 9.09e-06 AATTTATCCT TCACGTGA CCTGAGGGGG chr19:32836464-32836544 50 9.09e-06 CACCCGCGGC TCACGTGA TCCGTCCCCA chr15:50978996-50979076 51 9.09e-06 gcgggTCGGG TCACGTGA AGGGCGCGCG chr14:20923305-20923385 35 9.09e-06 GCGCCTCTGA TCACGTGA CCAGGTCCGC chr10:51827570-51827650 69 9.09e-06 GCGGGTTCTG TCACGTGA CATC chr3:112280779-112280859 19 9.09e-06 CACCGGGGCC TCACGTGA CACTAGACTC chr19:40324843-40324923 15 9.09e-06 TCCGCTCCCC TCACGTGA CCCACACTGA chr3:158519777-158519857 50 9.09e-06 TGCCGGGGCG TCACGTGA GCTCCCGGAG chr17:72511031-72511111 6 9.09e-06 tgatg tcacgtga tgggtgatat chr16:5083887-5083967 63 9.09e-06 TGGGCTCGCC TCACGTGA CTCAAGTCCC chr2:220042891-220042971 60 9.09e-06 CGCTCCGCAG TCACGTGA CGCTCGTCCG chr1:15930148-15930228 2 9.09e-06 G TCACGTGA GCCAGCGCCG chr13:50159667-50159747 70 9.09e-06 CCCGGCCGCC TCACGTGA CCC chr12:121342188-12134226 32 9.09e-06 CAAAACACGC TCACGTGA TGCGCGCCCC chr17:78075277-78075357 71 9.09e-06 CTCCCGCCGG TCACGTGA CC chrX:347679-347759 8 2.73e-05 CCCGCGT TCACGTCA CTGCGTCGCG chr4:119512803-119512883 21 2.73e-05 gtgcCTTCCG TGACGTGA GGCTTCCGTG chr17:6939079-6939159 63 4.66e-05 AGTCCCCGCG TCACGTGG GGCCCTACCT chr16:86939035-86939115 71 4.66e-05 TGGGCCAGCA TCACGTGG TG chr17:1733185-1733265 15 4.66e-05 CATGGGTGGG TCACGTGG GCCGCGCCTC chr13:113951360-11395144 1 4.66e-05 . TCACGTGG GTCCAGGGTC chr5:141392574-141392654 43 4.66e-05 cccgcgcggg TCACGTGG CTGCGGGTCA chr16:33569491-33569571 51 4.66e-05 caaaatgtgg tcacgtgg ccatgcttta chr20:37590793-37590873 9 4.66e-05 GAGCAGGG TCACGTGG GCTCGGGGGC chr11:61684986-61685066 49 4.66e-05 CCTGGGCGGG TCACGTGG CGGAGGGGGG chr19:47759736-47759816 31 4.66e-05 TTTCCCTTCC TCACGTGG TGCAGGCAGG chr6:84937339-84937419 66 4.66e-05 CCCGGGCTGG TCACGTGG GCCGTGG chr21:46238012-46238092 23 4.66e-05 GGCACGGGGG TCACGTGG CTGCGCGCGT chr12:54553049-54553129 67 4.66e-05 AGCGGGAGGG TCACGTGG CTCGGC chr3:184032273-184032353 53 4.66e-05 CCTGCGCCGG TCACGTGG GGGCGCCGGC chr11:61500999-61501079 30 4.66e-05 GCAGGCCCAG TCACGTGG GCTCCAGCGT chr1:44440527-44440607 65 4.66e-05 TACCGGCGCA TCACGTGG GCGAGTTA chr19:5340953-5341033 43 4.66e-05 CGCAGCGCGG TCACGTGG CTCCGGGGTG chrX:101914782-101914862 50 4.66e-05 GACTGCGCAG TCACGTGG AGGGGGGAGG chr15:99408693-99408773 45 4.66e-05 CCACCGTCCC TCACGTGG TCCCAGGCCA chr11:126081605-12608168 10 4.66e-05 CCCTGCAGG TCACGTGG TGCGGGGTGG chr17:80455093-80455173 48 4.66e-05 ACGTGGGAGG TCACGTGG GTGGTTTGTC chr17:40719046-40719126 21 4.66e-05 CGGGCGCGGG TCACGTGG GCACGCCACC chr5:172410724-172410804 22 4.66e-05 GGCGCGCGGG TCACGTGG GGGCGCGGGA chr3:51428570-51428650 65 4.66e-05 CGCCGCAGAG TCACGTGG CAGGACGG chr9:140009128-140009208 59 4.66e-05 CGGGCGCCCG TCACGTGG GCGGGGTCAC chr16:2570292-2570372 18 4.66e-05 GCTGGCTCGA TCACGTGG GCGCGGCGGT chr1:15296788-15296868 43 4.66e-05 aagccctgta tcacgtgg gcggggctct chrX:101975580-101975660 22 4.66e-05 GACTGCGCAG TCACGTGG GGCTGACGGT chr6:158653157-158653237 10 4.66e-05 cgcgccggg tcacgtgg cgcggtcacg chr12:54332412-54332492 42 4.66e-05 GCAGAGCGGG TCACGTGG GCGCGGGAGG chr11:60609482-60609562 42 5.56e-05 CGGCGACTCC TGACGTCA TAGGAAGGCG chr17:33914212-33914292 43 5.56e-05 CGCACCCCGA TGACGTCA CGCGGCGACG chr21:45209339-45209419 63 5.56e-05 TCGCGGGCTG TGACGTCA CGCCACGCGC chr9:33290395-33290475 13 5.56e-05 CGCGTCTATC TGACGTCA CGAACGCGCC chr14:32030564-32030644 17 5.56e-05 CGTTGCTCCG TGACGTCA TCACTCCGCG chr2:96068377-96068457 58 5.56e-05 CCATTGCCTG TGACGTCA CAGGATCGCG chr16:89766689-89766769 62 5.56e-05 ACGTGCCCAG TGACGTCA TCGGCTTCCT chr1:9489021-9489101 22 5.56e-05 CGCGGGTGTG TGACGTCA TCTGAGAGCG chr9:97488924-97489004 26 5.56e-05 CGCGTGTGGA TGACGTCA CCCGGCGCGT chr1:243265030-243265110 58 5.56e-05 CGCGCCCTTG TGACGTCA CGGAAGGCGC chr7:55433988-55434068 9 5.56e-05 GCCAGGCG TGACGTCA CAGGCGCGCG chr19:36036446-36036526 13 5.56e-05 ACGGGCTCTC TGACGTCA CTGGGCGCGA chr18:77439744-77439824 38 5.56e-05 CGCCCTTGCG TGACGTCA CGCGCCCTCC chr16:4897373-4897453 16 5.56e-05 GCCGCTACTC TGACGTCA CCGCGCCCGC chr1:224180291-224180371 55 5.56e-05 CCCGCCCTTG TGACGTCA CGGAAGGCGC chr4:57253621-57253701 57 5.56e-05 CGTCGCTACG TGACGTCA GTGCGAGCGA chr17:685530-685610 32 5.56e-05 CCACGGGCCG TGACGTCA CTAGCCGCCG chr20:44420516-44420596 62 5.56e-05 CGCGCTCCAG TGACGTCA CGGCGCCACT chr4:120375812-120375892 23 5.56e-05 CGCGCCATTG TGACGTCA CGGAAGGCGC chr4:8442468-8442548 6 5.56e-05 CTCCA TGACGTCA ACGCGCCGCG chr19:36103594-36103674 13 5.56e-05 CGGCAACCGA TGACGTCA CTGTTGGCGC chr22:26879772-26879852 70 5.56e-05 CGCACGCCGC TGACGTCA GAG chr7:45808632-45808712 23 5.56e-05 GCGCCTTCCG TGACGTCA CAAGGGCGCG chr2:240964750-240964830 50 5.56e-05 CGCGCTGCCG TGACGTCA CGGCCGGGGT chr16:86588781-86588861 60 5.56e-05 TGGCGCGTAG TGACGTCA CCCGCTCCGC chr14:20929769-20929849 14 6.42e-05 ACGTCAACTG TCACATGA CCTGCCAGAT chr8:126103991-126104071 29 6.42e-05 CCCCAGGCGG TCACATGA CCGAAGCGGC chr16:58718636-58718716 33 6.42e-05 TGAGCATGCA TCACATGA CGCCCGCTCG chr12:114184974-11418505 21 7.78e-05 TTAGAGCTGG TCATGTGA CCACGGGGTC chr7:915969-916049 12 7.78e-05 CGCCTCTGGG TCACGTGT TGCCTGCGGA chr12:131678807-13167888 48 7.78e-05 ccgaatccca tcatgtga cccaggctca chr1:89149860-89149940 14 7.78e-05 GCTGCCGCCG TCACGTGT GCTGGCAGCC chr21:45937269-45937349 38 7.78e-05 ACAAGCTGGG TCATGTGA CTGGCACTAG chr4:47465661-47465741 32 7.78e-05 GGGGCTTGGG TCACGTGT CAAGGCTGGC chr21:47442566-47442646 30 7.78e-05 tggaggggca tcacgtgt gcatctctaa chr1:173446149-173446229 46 7.78e-05 GAGCCCCGCA TCACGTGT GCAGAGACGG chr9:139844574-139844654 18 1.35e-04 GCGGCGGAGG TCACGTGC CCACCCTCCA chr16:28503395-28503475 24 1.35e-04 TGTTCCCCCA TCACGTGC TCAGAGGTTT chr1:21023482-21023562 55 1.35e-04 GCCCCGCCCG TCACGTGC AGCGCCCGAG chr11:116969245-11696932 33 1.35e-04 CAACCGCGGG TCACGTGC CGACGCGCGT chr15:44084221-44084301 5 1.35e-04 ACGG TCACGTGC TCGAGCCCGC chr15:73925859-73925939 16 1.35e-04 GCGAGGTAGG TCACGTGC CGAGGGCGCC chr15:40857347-40857427 57 1.35e-04 AACGGTGGAG TCACGTGC CCTGAGCATT chr1:39325526-39325606 24 1.35e-04 TGGTGCCCCG TCACGTGC CGGAATCACC chr11:777496-777576 30 1.35e-04 AGTTCGCGGG TCACGTGC CCTGGCGGCC chr18:13726612-13726692 50 1.52e-04 CCTCCGGAAG TGACGTAA GCAGACACGC chr17:8152575-8152655 23 1.52e-04 CGCACGCGGA TGACGTAA CAAACGCGCG chr1:52831833-52831913 30 1.61e-04 CTCGCGCGCA ACACGTGA CCCCACTGGC chr3:46792413-46792493 40 1.61e-04 TGGCGTCTGC ACACGTGA CCGCACTGTA chr14:92573020-92573100 63 1.61e-04 AACGCCGGGG ACACGTGA CCTTGGTAGC chr8:145692227-145692307 71 1.80e-04 CCTGGCTCAA GCACGTGA CC chr11:65255196-65255276 61 1.80e-04 GGAGGCAGGC GCACGTGA CCGTTTCCAT chr5:112073475-112073555 60 1.80e-04 GGGTGTGGGC GCACGTGA CCGACATGTG chr11:75525836-75525916 53 1.80e-04 CCCGCCTCCT GCACGTGA CACCGGAGCC chr17:8095548-8095628 57 1.80e-04 ccaggaacag gcacgtga cccaaaactg chr20:48746704-48746784 26 1.80e-04 tgagggccca gcacgtga cccaatctgg chr19:18133090-18133170 63 1.80e-04 tcagggctgg gcacgtga tcctgcctga chr16:69796140-69796220 57 2.17e-04 CTCTTCCGGG TCAGGTGA CCGCGCGCGG chr17:3539951-3540031 48 2.17e-04 GTGGCGGAGG TCAGGTGA CAGCGGACCC chr1:228296951-228297031 73 2.17e-04 TCGCGCGGTA TGACGTGT chr7:23145262-23145342 59 2.17e-04 CGCGCCACTG TGACGTGT CAGGCCCCGC chr17:17380283-17380363 11 2.17e-04 CGCGCGGTGG TGACGTGT AGAGTGCGCG chr12:28343257-28343337 55 2.92e-04 CGGCCTGGGG CCACGTGA CGCGCGTGTT chr12:132628889-13262896 63 2.92e-04 CGCGTAGAGA TGACGTCG GGTTCTACGC chr19:51373846-51373926 40 2.92e-04 GCCTCTCCCG TCACGTCC CAACCATGGA chr17:33895033-33895113 34 2.92e-04 TCAGGGGCGC CCACGTGA CCCGATGGCC chr16:1525028-1525108 22 2.92e-04 GCGCCGGCGG CCACGTGA CGCGCGACGG chr17:46688348-46688428 68 2.92e-04 GTGACCCCGC CCACGTGA CGTCC chr5:1345226-1345306 66 3.14e-04 GGCGCGTGTG TGACGTTA CCCGCCC chr1:1510252-1510332 12 3.19e-04 GGCGGCGTCC TGACATCA GCACCCCGCG chr12:112856673-11285675 5 3.19e-04 GCGG TGACATCA CGGGGGCGAC chr1:12156154-12156234 61 3.96e-04 cctgcttggg tcatgtgg caatcctgag chr12:120884161-12088424 51 4.29e-04 CGGCGCACTC TGATGTCA TCACTCTCAG chr19:7694422-7694502 32 4.29e-04 CGCGCGCTTA TGACGTCT ACCACTGACG chr19:17721344-17721424 56 4.29e-04 ttttggccaa tgaggtga gagaaaaaaa chr14:99947687-99947767 45 5.51e-04 CGCAGCGTGA TGACGTAG GTCCCCGACA chr16:69440963-69441043 17 5.51e-04 ctgctttaaa tcacatgc ctattcctga chr4:7075422-7075502 71 5.51e-04 caaaatgtgg tcacatgc ca chr9:6015626-6015706 42 5.51e-04 CTCGAAGCAG TGACGTAG GCGAGGCGCC chr14:24769009-24769089 21 5.51e-04 CGCGGAACTA TGACGTAG TAGCTGCGTC chr19:54619061-54619141 63 5.81e-04 CGCGAGAGTG AGACGTCA TCGGTGAGCG chr10:102027368-10202744 70 5.81e-04 CGCAACAATC AGACGTCA GCG chr3:52444008-52444088 32 5.81e-04 CGCCGGCGGC AGACGTCA CCAAGGCGCG chr7:73097885-73097965 12 6.46e-04 GCCGGGCTGA TGACATAA AAACCGGGTG chr22:22711744-22711824 31 6.46e-04 GAGGCTCTGG TCACCTGA TCACAGAACG chr13:45563620-45563700 49 6.46e-04 ACCACAGGCT TTACGTCA TTTCTCGGCG chr19:1275783-1275863 58 6.46e-04 TGCGTCAGGC GCACGTGG GCGCCGTCTC chr6:126661223-126661303 12 6.46e-04 TGCTCAGGGT TAACGTCA CTACTGAGCG chr9:140411378-140411458 10 7.22e-04 CTCACAAGC ACACATGA GTGCAGGAGT chr16:2021990-2022070 30 7.22e-04 GCGCCGGCGG GGACGTCA CAGTGGTCGC chr19:36119917-36119997 30 7.22e-04 CGCTTTTGCT GGACGTCA TCCTCGGGAG chr7:150759522-150759602 30 7.70e-04 CTCCCTGCCC CCACGTGG CCACCGCTCC chr20:23338736-23338816 26 8.13e-04 CCGATACGGC CGACGTCA TTACCCTGCG chr16:88772841-88772921 33 8.13e-04 GGCGCCACTC CGACGTCA TCGGGGCGCG chr4:123073406-123073486 57 8.60e-04 CGCTGGCGTG TGACGTTG CTGCCTGACG chr6:43027158-43027238 8 8.60e-04 TCCTAGA TGACGTTG ACTGTCCGGC chr1:36107109-36107189 59 9.27e-04 CGCTCTCGGA TGACGTAC AACTGTCGCG chr12:120755516-12075559 15 9.27e-04 CCAATCACAA TCACATCC TGTGGCGGCG chr16:67596216-67596296 43 1.08e-03 TCGCGGCGCG TCCCGTGA CGCCATCGCG chr22:50683418-50683498 68 1.08e-03 CGGAAATACG TCACGGGA ACGCC chr4:1340750-1340830 54 1.24e-03 CGAGCTCAGG GCACGTGC TAGGGGGCGG chr3:16306450-16306530 28 1.36e-03 CTCGGCATCA TCAGGTCG CGCCGGGCAA chr3:5562026-5562106 30 1.36e-03 ctgtgtgggg ccatgtga ctagtcctag chr9:108320445-108320525 18 1.36e-03 TACGGGAGGC TCAGGTCG GTACCCGGGG chr1:210001280-210001360 50 1.50e-03 GTCAGCGAGC CCACGTGC TTGTGTTGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:46090334-46090414 9.1e-06 27_[+1]_45 chr11:118938424-11893850 9.1e-06 69_[+1]_3 chr2:26987114-26987194 9.1e-06 9_[+1]_63 chr3:9143085-9143165 9.1e-06 42_[+1]_30 chr10:46222591-46222671 9.1e-06 47_[+1]_25 chr3:33839999-33840079 9.1e-06 16_[+1]_56 chr15:72668351-72668431 9.1e-06 46_[+1]_26 chr9:99179673-99179753 9.1e-06 34_[+1]_38 chr5:150827082-150827162 9.1e-06 72_[+1] chr17:79296783-79296863 9.1e-06 30_[+1]_42 chr3:122512637-122512717 9.1e-06 48_[+1]_24 chr9:131709862-131709942 9.1e-06 37_[+1]_35 chr19:49458034-49458114 9.1e-06 3_[+1]_69 chr16:84178734-84178814 9.1e-06 44_[+1]_28 chr6:44225034-44225114 9.1e-06 70_[+1]_2 chr9:117349945-117350025 9.1e-06 44_[+1]_28 chr7:4815203-4815283 9.1e-06 44_[+1]_28 chr19:7587418-7587498 9.1e-06 49_[+1]_23 chr16:67515077-67515157 9.1e-06 35_[+1]_37 chr13:49684322-49684402 9.1e-06 57_[+1]_15 chrX:55744129-55744209 9.1e-06 26_[+1]_46 chr19:2427888-2427968 9.1e-06 59_[+1]_13 chr9:6757894-6757974 9.1e-06 46_[+1]_26 chr16:88923465-88923545 9.1e-06 57_[+1]_15 chr1:11866202-11866282 9.1e-06 47_[+1]_25 chr1:28559502-28559582 9.1e-06 52_[+1]_20 chr12:65153184-65153264 9.1e-06 61_[+1]_11 chr21:38738870-38738950 9.1e-06 24_[+1]_48 chr19:32836464-32836544 9.1e-06 49_[+1]_23 chr15:50978996-50979076 9.1e-06 50_[+1]_22 chr14:20923305-20923385 9.1e-06 34_[+1]_38 chr10:51827570-51827650 9.1e-06 68_[+1]_4 chr3:112280779-112280859 9.1e-06 18_[+1]_54 chr19:40324843-40324923 9.1e-06 14_[+1]_58 chr3:158519777-158519857 9.1e-06 49_[+1]_23 chr17:72511031-72511111 9.1e-06 5_[+1]_67 chr16:5083887-5083967 9.1e-06 62_[+1]_10 chr2:220042891-220042971 9.1e-06 59_[+1]_13 chr1:15930148-15930228 9.1e-06 1_[+1]_71 chr13:50159667-50159747 9.1e-06 69_[+1]_3 chr12:121342188-12134226 9.1e-06 31_[+1]_41 chr17:78075277-78075357 9.1e-06 70_[+1]_2 chrX:347679-347759 2.7e-05 7_[+1]_65 chr4:119512803-119512883 2.7e-05 20_[+1]_52 chr17:6939079-6939159 4.7e-05 62_[+1]_10 chr16:86939035-86939115 4.7e-05 70_[+1]_2 chr17:1733185-1733265 4.7e-05 14_[+1]_58 chr13:113951360-11395144 4.7e-05 [+1]_72 chr5:141392574-141392654 4.7e-05 42_[+1]_30 chr16:33569491-33569571 4.7e-05 50_[+1]_22 chr20:37590793-37590873 4.7e-05 8_[+1]_64 chr11:61684986-61685066 4.7e-05 48_[+1]_24 chr19:47759736-47759816 4.7e-05 30_[+1]_42 chr6:84937339-84937419 4.7e-05 65_[+1]_7 chr21:46238012-46238092 4.7e-05 22_[+1]_50 chr12:54553049-54553129 4.7e-05 66_[+1]_6 chr3:184032273-184032353 4.7e-05 52_[+1]_20 chr11:61500999-61501079 4.7e-05 29_[+1]_43 chr1:44440527-44440607 4.7e-05 64_[+1]_8 chr19:5340953-5341033 4.7e-05 42_[+1]_30 chrX:101914782-101914862 4.7e-05 49_[+1]_23 chr15:99408693-99408773 4.7e-05 44_[+1]_28 chr11:126081605-12608168 4.7e-05 9_[+1]_63 chr17:80455093-80455173 4.7e-05 47_[+1]_25 chr17:40719046-40719126 4.7e-05 20_[+1]_52 chr5:172410724-172410804 4.7e-05 21_[+1]_51 chr3:51428570-51428650 4.7e-05 64_[+1]_8 chr9:140009128-140009208 4.7e-05 58_[+1]_14 chr16:2570292-2570372 4.7e-05 17_[+1]_55 chr1:15296788-15296868 4.7e-05 42_[+1]_30 chrX:101975580-101975660 4.7e-05 21_[+1]_51 chr6:158653157-158653237 4.7e-05 9_[+1]_63 chr12:54332412-54332492 4.7e-05 41_[+1]_31 chr11:60609482-60609562 5.6e-05 41_[+1]_31 chr17:33914212-33914292 5.6e-05 42_[+1]_30 chr21:45209339-45209419 5.6e-05 62_[+1]_10 chr9:33290395-33290475 5.6e-05 12_[+1]_60 chr14:32030564-32030644 5.6e-05 16_[+1]_56 chr2:96068377-96068457 5.6e-05 57_[+1]_15 chr16:89766689-89766769 5.6e-05 61_[+1]_11 chr1:9489021-9489101 5.6e-05 21_[+1]_51 chr9:97488924-97489004 5.6e-05 25_[+1]_47 chr1:243265030-243265110 5.6e-05 57_[+1]_15 chr7:55433988-55434068 5.6e-05 8_[+1]_64 chr19:36036446-36036526 5.6e-05 12_[+1]_60 chr18:77439744-77439824 5.6e-05 37_[+1]_35 chr16:4897373-4897453 5.6e-05 15_[+1]_57 chr1:224180291-224180371 5.6e-05 54_[+1]_18 chr4:57253621-57253701 5.6e-05 56_[+1]_16 chr17:685530-685610 5.6e-05 31_[+1]_41 chr20:44420516-44420596 5.6e-05 61_[+1]_11 chr4:120375812-120375892 5.6e-05 22_[+1]_50 chr4:8442468-8442548 5.6e-05 5_[+1]_67 chr19:36103594-36103674 5.6e-05 12_[+1]_60 chr22:26879772-26879852 5.6e-05 69_[+1]_3 chr7:45808632-45808712 5.6e-05 22_[+1]_50 chr2:240964750-240964830 5.6e-05 49_[+1]_23 chr16:86588781-86588861 5.6e-05 59_[+1]_13 chr14:20929769-20929849 6.4e-05 13_[+1]_59 chr8:126103991-126104071 6.4e-05 28_[+1]_44 chr16:58718636-58718716 6.4e-05 32_[+1]_40 chr12:114184974-11418505 7.8e-05 20_[+1]_52 chr7:915969-916049 7.8e-05 11_[+1]_61 chr12:131678807-13167888 7.8e-05 47_[+1]_25 chr1:89149860-89149940 7.8e-05 13_[+1]_59 chr21:45937269-45937349 7.8e-05 37_[+1]_35 chr4:47465661-47465741 7.8e-05 31_[+1]_41 chr21:47442566-47442646 7.8e-05 29_[+1]_43 chr1:173446149-173446229 7.8e-05 45_[+1]_27 chr9:139844574-139844654 0.00013 17_[+1]_55 chr16:28503395-28503475 0.00013 23_[+1]_49 chr1:21023482-21023562 0.00013 54_[+1]_18 chr11:116969245-11696932 0.00013 32_[+1]_40 chr15:44084221-44084301 0.00013 4_[+1]_68 chr15:73925859-73925939 0.00013 15_[+1]_57 chr15:40857347-40857427 0.00013 56_[+1]_16 chr1:39325526-39325606 0.00013 23_[+1]_49 chr11:777496-777576 0.00013 29_[+1]_43 chr18:13726612-13726692 0.00015 49_[+1]_23 chr17:8152575-8152655 0.00015 22_[+1]_50 chr1:52831833-52831913 0.00016 29_[+1]_43 chr3:46792413-46792493 0.00016 39_[+1]_33 chr14:92573020-92573100 0.00016 62_[+1]_10 chr8:145692227-145692307 0.00018 70_[+1]_2 chr11:65255196-65255276 0.00018 60_[+1]_12 chr5:112073475-112073555 0.00018 59_[+1]_13 chr11:75525836-75525916 0.00018 52_[+1]_20 chr17:8095548-8095628 0.00018 56_[+1]_16 chr20:48746704-48746784 0.00018 25_[+1]_47 chr19:18133090-18133170 0.00018 62_[+1]_10 chr16:69796140-69796220 0.00022 56_[+1]_16 chr17:3539951-3540031 0.00022 47_[+1]_25 chr1:228296951-228297031 0.00022 72_[+1] chr7:23145262-23145342 0.00022 58_[+1]_14 chr17:17380283-17380363 0.00022 10_[+1]_62 chr12:28343257-28343337 0.00029 54_[+1]_18 chr12:132628889-13262896 0.00029 62_[+1]_10 chr19:51373846-51373926 0.00029 39_[+1]_33 chr17:33895033-33895113 0.00029 33_[+1]_39 chr16:1525028-1525108 0.00029 21_[+1]_51 chr17:46688348-46688428 0.00029 67_[+1]_5 chr5:1345226-1345306 0.00031 65_[+1]_7 chr1:1510252-1510332 0.00032 11_[+1]_61 chr12:112856673-11285675 0.00032 4_[+1]_68 chr1:12156154-12156234 0.0004 60_[+1]_12 chr12:120884161-12088424 0.00043 50_[+1]_22 chr19:7694422-7694502 0.00043 31_[+1]_41 chr19:17721344-17721424 0.00043 55_[+1]_17 chr14:99947687-99947767 0.00055 44_[+1]_28 chr16:69440963-69441043 0.00055 16_[+1]_56 chr4:7075422-7075502 0.00055 70_[+1]_2 chr9:6015626-6015706 0.00055 41_[+1]_31 chr14:24769009-24769089 0.00055 20_[+1]_52 chr19:54619061-54619141 0.00058 62_[+1]_10 chr10:102027368-10202744 0.00058 69_[+1]_3 chr3:52444008-52444088 0.00058 31_[+1]_41 chr7:73097885-73097965 0.00065 11_[+1]_61 chr22:22711744-22711824 0.00065 30_[+1]_42 chr13:45563620-45563700 0.00065 48_[+1]_24 chr19:1275783-1275863 0.00065 57_[+1]_15 chr6:126661223-126661303 0.00065 11_[+1]_61 chr9:140411378-140411458 0.00072 9_[+1]_63 chr16:2021990-2022070 0.00072 29_[+1]_43 chr19:36119917-36119997 0.00072 29_[+1]_43 chr7:150759522-150759602 0.00077 29_[+1]_43 chr20:23338736-23338816 0.00081 25_[+1]_47 chr16:88772841-88772921 0.00081 32_[+1]_40 chr4:123073406-123073486 0.00086 56_[+1]_16 chr6:43027158-43027238 0.00086 7_[+1]_65 chr1:36107109-36107189 0.00093 58_[+1]_14 chr12:120755516-12075559 0.00093 14_[+1]_58 chr16:67596216-67596296 0.0011 42_[+1]_30 chr22:50683418-50683498 0.0011 67_[+1]_5 chr4:1340750-1340830 0.0012 53_[+1]_19 chr3:16306450-16306530 0.0014 27_[+1]_45 chr3:5562026-5562106 0.0014 29_[+1]_43 chr9:108320445-108320525 0.0014 17_[+1]_55 chr1:210001280-210001360 0.0015 49_[+1]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCACGTGA width=8 seqs=178 chr10:46090334-46090414 ( 28) TCACGTGA 1 chr11:118938424-11893850 ( 70) TCACGTGA 1 chr2:26987114-26987194 ( 10) TCACGTGA 1 chr3:9143085-9143165 ( 43) TCACGTGA 1 chr10:46222591-46222671 ( 48) TCACGTGA 1 chr3:33839999-33840079 ( 17) TCACGTGA 1 chr15:72668351-72668431 ( 47) TCACGTGA 1 chr9:99179673-99179753 ( 35) TCACGTGA 1 chr5:150827082-150827162 ( 73) TCACGTGA 1 chr17:79296783-79296863 ( 31) TCACGTGA 1 chr3:122512637-122512717 ( 49) TCACGTGA 1 chr9:131709862-131709942 ( 38) TCACGTGA 1 chr19:49458034-49458114 ( 4) TCACGTGA 1 chr16:84178734-84178814 ( 45) TCACGTGA 1 chr6:44225034-44225114 ( 71) TCACGTGA 1 chr9:117349945-117350025 ( 45) TCACGTGA 1 chr7:4815203-4815283 ( 45) TCACGTGA 1 chr19:7587418-7587498 ( 50) TCACGTGA 1 chr16:67515077-67515157 ( 36) TCACGTGA 1 chr13:49684322-49684402 ( 58) TCACGTGA 1 chrX:55744129-55744209 ( 27) TCACGTGA 1 chr19:2427888-2427968 ( 60) TCACGTGA 1 chr9:6757894-6757974 ( 47) TCACGTGA 1 chr16:88923465-88923545 ( 58) TCACGTGA 1 chr1:11866202-11866282 ( 48) TCACGTGA 1 chr1:28559502-28559582 ( 53) TCACGTGA 1 chr12:65153184-65153264 ( 62) TCACGTGA 1 chr21:38738870-38738950 ( 25) TCACGTGA 1 chr19:32836464-32836544 ( 50) TCACGTGA 1 chr15:50978996-50979076 ( 51) TCACGTGA 1 chr14:20923305-20923385 ( 35) TCACGTGA 1 chr10:51827570-51827650 ( 69) TCACGTGA 1 chr3:112280779-112280859 ( 19) TCACGTGA 1 chr19:40324843-40324923 ( 15) TCACGTGA 1 chr3:158519777-158519857 ( 50) TCACGTGA 1 chr17:72511031-72511111 ( 6) TCACGTGA 1 chr16:5083887-5083967 ( 63) TCACGTGA 1 chr2:220042891-220042971 ( 60) TCACGTGA 1 chr1:15930148-15930228 ( 2) TCACGTGA 1 chr13:50159667-50159747 ( 70) TCACGTGA 1 chr12:121342188-12134226 ( 32) TCACGTGA 1 chr17:78075277-78075357 ( 71) TCACGTGA 1 chrX:347679-347759 ( 8) TCACGTCA 1 chr4:119512803-119512883 ( 21) TGACGTGA 1 chr17:6939079-6939159 ( 63) TCACGTGG 1 chr16:86939035-86939115 ( 71) TCACGTGG 1 chr17:1733185-1733265 ( 15) TCACGTGG 1 chr13:113951360-11395144 ( 1) TCACGTGG 1 chr5:141392574-141392654 ( 43) TCACGTGG 1 chr16:33569491-33569571 ( 51) TCACGTGG 1 chr20:37590793-37590873 ( 9) TCACGTGG 1 chr11:61684986-61685066 ( 49) TCACGTGG 1 chr19:47759736-47759816 ( 31) TCACGTGG 1 chr6:84937339-84937419 ( 66) TCACGTGG 1 chr21:46238012-46238092 ( 23) TCACGTGG 1 chr12:54553049-54553129 ( 67) TCACGTGG 1 chr3:184032273-184032353 ( 53) TCACGTGG 1 chr11:61500999-61501079 ( 30) TCACGTGG 1 chr1:44440527-44440607 ( 65) TCACGTGG 1 chr19:5340953-5341033 ( 43) TCACGTGG 1 chrX:101914782-101914862 ( 50) TCACGTGG 1 chr15:99408693-99408773 ( 45) TCACGTGG 1 chr11:126081605-12608168 ( 10) TCACGTGG 1 chr17:80455093-80455173 ( 48) TCACGTGG 1 chr17:40719046-40719126 ( 21) TCACGTGG 1 chr5:172410724-172410804 ( 22) TCACGTGG 1 chr3:51428570-51428650 ( 65) TCACGTGG 1 chr9:140009128-140009208 ( 59) TCACGTGG 1 chr16:2570292-2570372 ( 18) TCACGTGG 1 chr1:15296788-15296868 ( 43) TCACGTGG 1 chrX:101975580-101975660 ( 22) TCACGTGG 1 chr6:158653157-158653237 ( 10) TCACGTGG 1 chr12:54332412-54332492 ( 42) TCACGTGG 1 chr11:60609482-60609562 ( 42) TGACGTCA 1 chr17:33914212-33914292 ( 43) TGACGTCA 1 chr21:45209339-45209419 ( 63) TGACGTCA 1 chr9:33290395-33290475 ( 13) TGACGTCA 1 chr14:32030564-32030644 ( 17) TGACGTCA 1 chr2:96068377-96068457 ( 58) TGACGTCA 1 chr16:89766689-89766769 ( 62) TGACGTCA 1 chr1:9489021-9489101 ( 22) TGACGTCA 1 chr9:97488924-97489004 ( 26) TGACGTCA 1 chr1:243265030-243265110 ( 58) TGACGTCA 1 chr7:55433988-55434068 ( 9) TGACGTCA 1 chr19:36036446-36036526 ( 13) TGACGTCA 1 chr18:77439744-77439824 ( 38) TGACGTCA 1 chr16:4897373-4897453 ( 16) TGACGTCA 1 chr1:224180291-224180371 ( 55) TGACGTCA 1 chr4:57253621-57253701 ( 57) TGACGTCA 1 chr17:685530-685610 ( 32) TGACGTCA 1 chr20:44420516-44420596 ( 62) TGACGTCA 1 chr4:120375812-120375892 ( 23) TGACGTCA 1 chr4:8442468-8442548 ( 6) TGACGTCA 1 chr19:36103594-36103674 ( 13) TGACGTCA 1 chr22:26879772-26879852 ( 70) TGACGTCA 1 chr7:45808632-45808712 ( 23) TGACGTCA 1 chr2:240964750-240964830 ( 50) TGACGTCA 1 chr16:86588781-86588861 ( 60) TGACGTCA 1 chr14:20929769-20929849 ( 14) TCACATGA 1 chr8:126103991-126104071 ( 29) TCACATGA 1 chr16:58718636-58718716 ( 33) TCACATGA 1 chr12:114184974-11418505 ( 21) TCATGTGA 1 chr7:915969-916049 ( 12) TCACGTGT 1 chr12:131678807-13167888 ( 48) TCATGTGA 1 chr1:89149860-89149940 ( 14) TCACGTGT 1 chr21:45937269-45937349 ( 38) TCATGTGA 1 chr4:47465661-47465741 ( 32) TCACGTGT 1 chr21:47442566-47442646 ( 30) TCACGTGT 1 chr1:173446149-173446229 ( 46) TCACGTGT 1 chr9:139844574-139844654 ( 18) TCACGTGC 1 chr16:28503395-28503475 ( 24) TCACGTGC 1 chr1:21023482-21023562 ( 55) TCACGTGC 1 chr11:116969245-11696932 ( 33) TCACGTGC 1 chr15:44084221-44084301 ( 5) TCACGTGC 1 chr15:73925859-73925939 ( 16) TCACGTGC 1 chr15:40857347-40857427 ( 57) TCACGTGC 1 chr1:39325526-39325606 ( 24) TCACGTGC 1 chr11:777496-777576 ( 30) TCACGTGC 1 chr18:13726612-13726692 ( 50) TGACGTAA 1 chr17:8152575-8152655 ( 23) TGACGTAA 1 chr1:52831833-52831913 ( 30) ACACGTGA 1 chr3:46792413-46792493 ( 40) ACACGTGA 1 chr14:92573020-92573100 ( 63) ACACGTGA 1 chr8:145692227-145692307 ( 71) GCACGTGA 1 chr11:65255196-65255276 ( 61) GCACGTGA 1 chr5:112073475-112073555 ( 60) GCACGTGA 1 chr11:75525836-75525916 ( 53) GCACGTGA 1 chr17:8095548-8095628 ( 57) GCACGTGA 1 chr20:48746704-48746784 ( 26) GCACGTGA 1 chr19:18133090-18133170 ( 63) GCACGTGA 1 chr16:69796140-69796220 ( 57) TCAGGTGA 1 chr17:3539951-3540031 ( 48) TCAGGTGA 1 chr1:228296951-228297031 ( 73) TGACGTGT 1 chr7:23145262-23145342 ( 59) TGACGTGT 1 chr17:17380283-17380363 ( 11) TGACGTGT 1 chr12:28343257-28343337 ( 55) CCACGTGA 1 chr12:132628889-13262896 ( 63) TGACGTCG 1 chr19:51373846-51373926 ( 40) TCACGTCC 1 chr17:33895033-33895113 ( 34) CCACGTGA 1 chr16:1525028-1525108 ( 22) CCACGTGA 1 chr17:46688348-46688428 ( 68) CCACGTGA 1 chr5:1345226-1345306 ( 66) TGACGTTA 1 chr1:1510252-1510332 ( 12) TGACATCA 1 chr12:112856673-11285675 ( 5) TGACATCA 1 chr1:12156154-12156234 ( 61) TCATGTGG 1 chr12:120884161-12088424 ( 51) TGATGTCA 1 chr19:7694422-7694502 ( 32) TGACGTCT 1 chr19:17721344-17721424 ( 56) TGAGGTGA 1 chr14:99947687-99947767 ( 45) TGACGTAG 1 chr16:69440963-69441043 ( 17) TCACATGC 1 chr4:7075422-7075502 ( 71) TCACATGC 1 chr9:6015626-6015706 ( 42) TGACGTAG 1 chr14:24769009-24769089 ( 21) TGACGTAG 1 chr19:54619061-54619141 ( 63) AGACGTCA 1 chr10:102027368-10202744 ( 70) AGACGTCA 1 chr3:52444008-52444088 ( 32) AGACGTCA 1 chr7:73097885-73097965 ( 12) TGACATAA 1 chr22:22711744-22711824 ( 31) TCACCTGA 1 chr13:45563620-45563700 ( 49) TTACGTCA 1 chr19:1275783-1275863 ( 58) GCACGTGG 1 chr6:126661223-126661303 ( 12) TAACGTCA 1 chr9:140411378-140411458 ( 10) ACACATGA 1 chr16:2021990-2022070 ( 30) GGACGTCA 1 chr19:36119917-36119997 ( 30) GGACGTCA 1 chr7:150759522-150759602 ( 30) CCACGTGG 1 chr20:23338736-23338816 ( 26) CGACGTCA 1 chr16:88772841-88772921 ( 33) CGACGTCA 1 chr4:123073406-123073486 ( 57) TGACGTTG 1 chr6:43027158-43027238 ( 8) TGACGTTG 1 chr1:36107109-36107189 ( 59) TGACGTAC 1 chr12:120755516-12075559 ( 15) TCACATCC 1 chr16:67596216-67596296 ( 43) TCCCGTGA 1 chr22:50683418-50683498 ( 68) TCACGGGA 1 chr4:1340750-1340830 ( 54) GCACGTGC 1 chr3:16306450-16306530 ( 28) TCAGGTCG 1 chr3:5562026-5562106 ( 30) CCATGTGA 1 chr9:108320445-108320525 ( 18) TCAGGTCG 1 chr1:210001280-210001360 ( 50) CCACGTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 7.03613 E= 3.2e-179 -205 -270 -248 238 -485 108 -24 -486 261 -587 -1412 -1412 -1412 151 -362 -228 -153 -587 144 -1412 -1412 -1412 -594 261 -205 -41 101 -328 196 -187 -62 -169 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 178 E= 3.2e-179 0.039326 0.050562 0.061798 0.848315 0.005618 0.696629 0.292135 0.005618 0.994382 0.005618 0.000000 0.000000 0.000000 0.938202 0.028090 0.033708 0.056180 0.005618 0.938202 0.000000 0.000000 0.000000 0.005618 0.994382 0.039326 0.247191 0.696629 0.016854 0.634831 0.089888 0.224719 0.050562 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-1 regular expression -------------------------------------------------------------------------------- T[CG]ACGT[GC][AG] -------------------------------------------------------------------------------- Time 4.98 secs. ******************************************************************************** ******************************************************************************** MOTIF TCACGTGA MEME-2 width = 8 sites = 74 llr = 575 E-value = 3.9e-027 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:a:1::6 pos.-specific C 2a:71::1 probability G 1::19:a3 matrix T 6::1:a:: bits 2.6 * 2.4 * * 2.1 * * 1.8 * * Relative 1.6 ** ** Entropy 1.3 ** ** (11.2 bits) 1.0 ** *** 0.8 *** **** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TCACGTGA consensus C G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr10:46222591-46222671 63 9.09e-06 TGACATCAGG TCACGTGA GGCCGGTCAC chr13:49684322-49684402 72 9.09e-06 GTGATGACTG TCACGTGA C chr12:65153184-65153264 22 9.09e-06 CTAGGCGCGA TCACGTGA GCCAGGGACA chr17:72511031-72511111 40 9.09e-06 atgggcgaca tcacgtga tgggcgatca chr2:220042891-220042971 33 9.09e-06 TTAGGCCGCG TCACGTGA CGGGCTCAGC chr17:78075277-78075357 26 9.09e-06 GGAGGCCGCG TCACGTGA CCCACCGCGG chr8:126103991-126104071 65 1.36e-05 GGGAGGGGCA TCATGTGA CCACTCGC chr7:4815203-4815283 1 1.36e-05 . TCATGTGA TGCGGCACGT chr12:131678807-13167888 29 1.36e-05 gtcaggcccc tcatgtga cccgaatccc chr3:158519777-158519857 68 1.36e-05 GCTCCCGGAG TCATGTGA CCGCC chrX:101975580-101975660 43 1.36e-05 TGACGGTGGG TCATGTGA CCAGGCTCTG chr11:118938424-11893850 48 5.12e-05 AAGCTGCCGA CCACGTGA TTCGCTGGCT chr16:86939035-86939115 41 5.12e-05 ACATCAGACA TCACGTGG GCCAGCGTCA chr18:13726612-13726692 24 5.12e-05 CTGACCGTCT CCACGTGA CTCTCGCACC chr3:122512637-122512717 38 5.12e-05 ACGCCGGCTC TCACGTGG AGGTCACGTG chr20:37590793-37590873 61 5.12e-05 TGGAAGTGGG TCACGTGG CTCAGACGGG chr19:49458034-49458114 52 5.12e-05 TGCGGGGCGG CCACGTGA AGGACGCACG chr6:44225034-44225114 50 5.12e-05 GGCGCGGCAG TCACGTGG CCCGGGGGCT chrX:55744129-55744209 59 5.12e-05 AGGCAGATGC CCACGTGA TCCTGGCCTG chr15:44084221-44084301 67 5.12e-05 CCCAACCTGC CCACGTGA CCCGGC chr1:44440527-44440607 47 5.12e-05 CGGCGTGGGG TCACGTGG TACCGGCGCA chr9:6757894-6757974 15 5.12e-05 GTTTGTAAGC CCACGTGA CTCACCAAGT chr1:11866202-11866282 25 5.12e-05 CTCGAGAGGG CCACGTGA CCGTCCCGGG chr1:28559502-28559582 24 5.12e-05 GGCCCAGCCA CCACGTGA CCCTTCTGCG chr15:99408693-99408773 10 5.12e-05 GCATAGCGG CCACGTGA CTGCGCCCCG chr15:50978996-50979076 2 5.12e-05 A CCACGTGA gcggcgcggc chr11:126081605-12608168 40 5.12e-05 CCTGGGCGAG TCACGTGG GGACGGTGCG chr17:80455093-80455173 36 5.12e-05 CCGCCGGCCG TCACGTGG GAGGTCACGT chr16:1525028-1525108 42 5.12e-05 CGCGACGGGG CCACGTGA TGAGCGACGG chr16:2570292-2570372 67 5.12e-05 CAGCTGAAGG TCACGTGG GCGCGG chr13:50159667-50159747 51 5.12e-05 GCCCGCCGGG TCACGTGG CCCCGGCCGC chr6:158653157-158653237 23 5.12e-05 cgtggcgcgg tcacgtgg cgcgcagccg chr17:46688348-46688428 54 5.12e-05 CCTCTCCGGA CCACGTGA CCCCGCCCAC chr6:84937339-84937419 48 5.55e-05 GGTTCTGGAG TCACATGA CCCGGGCTGG chr15:72668351-72668431 12 6.50e-05 GAGACCCTGG TCAGGTGA GCGGCGCCCC chr16:67515077-67515157 16 6.50e-05 GTCAAGTGCG TCAGGTGA CGCGCAAGCG chr11:75525836-75525916 31 6.50e-05 TTCTCCCTAA TCAGGTGA CTCTCCCGCC chr19:32836464-32836544 30 7.37e-05 GCCATTCGGG TCACCTGA CCCACCCGCG chr1:39325526-39325606 37 7.37e-05 CGTGCCGGAA TCACCTGA CTCAGAGCCG chr1:15296788-15296868 23 7.37e-05 ccaaagcaag tcacctga ccaagccctg chr21:45937269-45937349 13 8.28e-05 AGCTGTGAGT ACACGTGA CACAGGGACA chr16:58718636-58718716 18 8.28e-05 GGCTGCGGAG ACACGTGA GCATGCATCA chr5:150827082-150827162 38 1.02e-04 GCTCAAGGGA GCACGTGA CCTCGGCCTC chr14:20929769-20929849 53 1.02e-04 TGCAAAACCT GCACGTGA CTAGAGGTTC chr16:4897373-4897453 58 1.02e-04 CGACCGAGGG GCACGTGA CGCGAGCGCC chr3:46792413-46792493 58 1.02e-04 CCGCACTGTA GCACGTGA TGGCGCCGGG chr3:112280779-112280859 42 1.02e-04 GACTCTCCCG GCACGTGA CGTGAGAAAG chr1:15930148-15930228 46 1.02e-04 TACGCCGCAG GCACGTGA TGCGGCGCAA chr10:46090334-46090414 44 1.30e-04 GACGCGGGCG TCACGTGT CCGGCCGAGT chr13:113951360-11395144 51 1.30e-04 CCGCTGCGGG TCACGTGT CGGCCTGCAT chr7:915969-916049 72 1.30e-04 CGCCCCTGGG TCACGTGT T chr15:73925859-73925939 39 1.30e-04 GCGCCTCTGG CCATGTGA CGGGGCGAGG chr16:5083887-5083967 48 1.30e-04 GGGCCTCGGG TCATGTGG GCTCGCCTCA chr19:17721344-17721424 33 1.32e-04 ctaagtgtgg tcatatga ctatgttttg chr10:51827570-51827650 53 1.59e-04 GCAGGTCGGA TCACGTGC GGGTTCTGTC chr12:121342188-12134226 13 1.59e-04 CCCGCGCGGG TCACGTGC CCAAAACACG chr12:54332412-54332492 24 1.59e-04 GGCCGGGGCA TCACGTGC GCAGAGCGGG chr14:20923305-20923385 56 2.03e-04 GGTCCGCTAC CCACGTGG GGGCTCAGCG chr9:139844574-139844654 40 2.29e-04 CCTCCACCAA TCACGTTA GACGGGAGGA chr12:114184974-11418505 37 2.29e-04 GACCACGGGG TCACATGG CCCAGAGCTG chr17:3539951-3540031 34 2.69e-04 GCCCCACGAG TCAGGTGG CGGAGGTCAG chr9:117349945-117350025 22 3.69e-04 TCAAGAGCGG TCAGCTGA TGCTACGCTG chr17:1627987-1628067 9 3.69e-04 GACCCGCG TCAGCTGA CCCGTCACGG chr8:104033218-104033298 63 3.69e-04 CGCGCCGCGG TCAGCTGA CTGCTGGGCT chr16:90039167-90039247 3 4.19e-04 CG ACAGGTGA GCGGGGAGGC chr16:9233909-9233989 55 4.66e-04 ctatgtgtgg ccatgtgg tacgttctgg chr16:67143819-67143899 70 5.02e-04 cgcggctgct gcaggtga ggt chr16:89766689-89766769 50 5.94e-04 CGTAGCTCGC CCACGTGC CCAGTGACGT chr21:46238012-46238092 41 5.94e-04 CTGCGCGCGT TCACGAgg cgcgctcccc chrX:347679-347759 43 5.94e-04 GACGATGTCA TCACGAGG CGACGCCGCC chr11:61500999-61501079 6 6.44e-04 TGTCA TCCCGTGA CAGCTGGCAG chr7:45808632-45808712 3 6.44e-04 AG TCACAAGA GCGCGCCTTC chr5:112073475-112073555 71 7.54e-04 CACGTGACCG ACATGTGG CT chr7:150759522-150759602 46 7.54e-04 GGCCACCGCT CCACATGG CCCCCTTTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:46222591-46222671 9.1e-06 62_[+2]_10 chr13:49684322-49684402 9.1e-06 71_[+2]_1 chr12:65153184-65153264 9.1e-06 21_[+2]_51 chr17:72511031-72511111 9.1e-06 39_[+2]_33 chr2:220042891-220042971 9.1e-06 32_[+2]_40 chr17:78075277-78075357 9.1e-06 25_[+2]_47 chr8:126103991-126104071 1.4e-05 64_[+2]_8 chr7:4815203-4815283 1.4e-05 [+2]_72 chr12:131678807-13167888 1.4e-05 28_[+2]_44 chr3:158519777-158519857 1.4e-05 67_[+2]_5 chrX:101975580-101975660 1.4e-05 42_[+2]_30 chr11:118938424-11893850 5.1e-05 47_[+2]_25 chr16:86939035-86939115 5.1e-05 40_[+2]_32 chr18:13726612-13726692 5.1e-05 23_[+2]_49 chr3:122512637-122512717 5.1e-05 37_[+2]_35 chr20:37590793-37590873 5.1e-05 60_[+2]_12 chr19:49458034-49458114 5.1e-05 51_[+2]_21 chr6:44225034-44225114 5.1e-05 49_[+2]_23 chrX:55744129-55744209 5.1e-05 58_[+2]_14 chr15:44084221-44084301 5.1e-05 66_[+2]_6 chr1:44440527-44440607 5.1e-05 46_[+2]_26 chr9:6757894-6757974 5.1e-05 14_[+2]_58 chr1:11866202-11866282 5.1e-05 24_[+2]_48 chr1:28559502-28559582 5.1e-05 23_[+2]_49 chr15:99408693-99408773 5.1e-05 9_[+2]_63 chr15:50978996-50979076 5.1e-05 1_[+2]_71 chr11:126081605-12608168 5.1e-05 39_[+2]_33 chr17:80455093-80455173 5.1e-05 35_[+2]_37 chr16:1525028-1525108 5.1e-05 41_[+2]_31 chr16:2570292-2570372 5.1e-05 66_[+2]_6 chr13:50159667-50159747 5.1e-05 50_[+2]_22 chr6:158653157-158653237 5.1e-05 22_[+2]_50 chr17:46688348-46688428 5.1e-05 53_[+2]_19 chr6:84937339-84937419 5.6e-05 47_[+2]_25 chr15:72668351-72668431 6.5e-05 11_[+2]_61 chr16:67515077-67515157 6.5e-05 15_[+2]_57 chr11:75525836-75525916 6.5e-05 30_[+2]_42 chr19:32836464-32836544 7.4e-05 29_[+2]_43 chr1:39325526-39325606 7.4e-05 36_[+2]_36 chr1:15296788-15296868 7.4e-05 22_[+2]_50 chr21:45937269-45937349 8.3e-05 12_[+2]_60 chr16:58718636-58718716 8.3e-05 17_[+2]_55 chr5:150827082-150827162 0.0001 37_[+2]_35 chr14:20929769-20929849 0.0001 52_[+2]_20 chr16:4897373-4897453 0.0001 57_[+2]_15 chr3:46792413-46792493 0.0001 57_[+2]_15 chr3:112280779-112280859 0.0001 41_[+2]_31 chr1:15930148-15930228 0.0001 45_[+2]_27 chr10:46090334-46090414 0.00013 43_[+2]_29 chr13:113951360-11395144 0.00013 50_[+2]_22 chr7:915969-916049 0.00013 71_[+2]_1 chr15:73925859-73925939 0.00013 38_[+2]_34 chr16:5083887-5083967 0.00013 47_[+2]_25 chr19:17721344-17721424 0.00013 32_[+2]_40 chr10:51827570-51827650 0.00016 52_[+2]_20 chr12:121342188-12134226 0.00016 12_[+2]_60 chr12:54332412-54332492 0.00016 23_[+2]_49 chr14:20923305-20923385 0.0002 55_[+2]_17 chr9:139844574-139844654 0.00023 39_[+2]_33 chr12:114184974-11418505 0.00023 36_[+2]_36 chr17:3539951-3540031 0.00027 33_[+2]_39 chr9:117349945-117350025 0.00037 21_[+2]_51 chr17:1627987-1628067 0.00037 8_[+2]_64 chr8:104033218-104033298 0.00037 62_[+2]_10 chr16:90039167-90039247 0.00042 2_[+2]_70 chr16:9233909-9233989 0.00047 54_[+2]_18 chr16:67143819-67143899 0.0005 69_[+2]_3 chr16:89766689-89766769 0.00059 49_[+2]_23 chr21:46238012-46238092 0.00059 40_[+2]_32 chrX:347679-347759 0.00059 42_[+2]_30 chr11:61500999-61501079 0.00064 5_[+2]_67 chr7:45808632-45808712 0.00064 2_[+2]_70 chr5:112073475-112073555 0.00075 70_[+2]_2 chr7:150759522-150759602 0.00075 45_[+2]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCACGTGA width=8 seqs=74 chr10:46222591-46222671 ( 63) TCACGTGA 1 chr13:49684322-49684402 ( 72) TCACGTGA 1 chr12:65153184-65153264 ( 22) TCACGTGA 1 chr17:72511031-72511111 ( 40) TCACGTGA 1 chr2:220042891-220042971 ( 33) TCACGTGA 1 chr17:78075277-78075357 ( 26) TCACGTGA 1 chr8:126103991-126104071 ( 65) TCATGTGA 1 chr7:4815203-4815283 ( 1) TCATGTGA 1 chr12:131678807-13167888 ( 29) TCATGTGA 1 chr3:158519777-158519857 ( 68) TCATGTGA 1 chrX:101975580-101975660 ( 43) TCATGTGA 1 chr11:118938424-11893850 ( 48) CCACGTGA 1 chr16:86939035-86939115 ( 41) TCACGTGG 1 chr18:13726612-13726692 ( 24) CCACGTGA 1 chr3:122512637-122512717 ( 38) TCACGTGG 1 chr20:37590793-37590873 ( 61) TCACGTGG 1 chr19:49458034-49458114 ( 52) CCACGTGA 1 chr6:44225034-44225114 ( 50) TCACGTGG 1 chrX:55744129-55744209 ( 59) CCACGTGA 1 chr15:44084221-44084301 ( 67) CCACGTGA 1 chr1:44440527-44440607 ( 47) TCACGTGG 1 chr9:6757894-6757974 ( 15) CCACGTGA 1 chr1:11866202-11866282 ( 25) CCACGTGA 1 chr1:28559502-28559582 ( 24) CCACGTGA 1 chr15:99408693-99408773 ( 10) CCACGTGA 1 chr15:50978996-50979076 ( 2) CCACGTGA 1 chr11:126081605-12608168 ( 40) TCACGTGG 1 chr17:80455093-80455173 ( 36) TCACGTGG 1 chr16:1525028-1525108 ( 42) CCACGTGA 1 chr16:2570292-2570372 ( 67) TCACGTGG 1 chr13:50159667-50159747 ( 51) TCACGTGG 1 chr6:158653157-158653237 ( 23) TCACGTGG 1 chr17:46688348-46688428 ( 54) CCACGTGA 1 chr6:84937339-84937419 ( 48) TCACATGA 1 chr15:72668351-72668431 ( 12) TCAGGTGA 1 chr16:67515077-67515157 ( 16) TCAGGTGA 1 chr11:75525836-75525916 ( 31) TCAGGTGA 1 chr19:32836464-32836544 ( 30) TCACCTGA 1 chr1:39325526-39325606 ( 37) TCACCTGA 1 chr1:15296788-15296868 ( 23) TCACCTGA 1 chr21:45937269-45937349 ( 13) ACACGTGA 1 chr16:58718636-58718716 ( 18) ACACGTGA 1 chr5:150827082-150827162 ( 38) GCACGTGA 1 chr14:20929769-20929849 ( 53) GCACGTGA 1 chr16:4897373-4897453 ( 58) GCACGTGA 1 chr3:46792413-46792493 ( 58) GCACGTGA 1 chr3:112280779-112280859 ( 42) GCACGTGA 1 chr1:15930148-15930228 ( 46) GCACGTGA 1 chr10:46090334-46090414 ( 44) TCACGTGT 1 chr13:113951360-11395144 ( 51) TCACGTGT 1 chr7:915969-916049 ( 72) TCACGTGT 1 chr15:73925859-73925939 ( 39) CCATGTGA 1 chr16:5083887-5083967 ( 48) TCATGTGG 1 chr19:17721344-17721424 ( 33) TCATATGA 1 chr10:51827570-51827650 ( 53) TCACGTGC 1 chr12:121342188-12134226 ( 13) TCACGTGC 1 chr12:54332412-54332492 ( 24) TCACGTGC 1 chr14:20923305-20923385 ( 56) CCACGTGG 1 chr9:139844574-139844654 ( 40) TCACGTTA 1 chr12:114184974-11418505 ( 37) TCACATGG 1 chr17:3539951-3540031 ( 34) TCAGGTGG 1 chr9:117349945-117350025 ( 22) TCAGCTGA 1 chr17:1627987-1628067 ( 9) TCAGCTGA 1 chr8:104033218-104033298 ( 63) TCAGCTGA 1 chr16:90039167-90039247 ( 3) ACAGGTGA 1 chr16:9233909-9233989 ( 55) CCATGTGG 1 chr16:67143819-67143899 ( 70) GCAGGTGA 1 chr16:89766689-89766769 ( 50) CCACGTGC 1 chr21:46238012-46238092 ( 41) TCACGAGG 1 chrX:347679-347759 ( 43) TCACGAGG 1 chr11:61500999-61501079 ( 6) TCCCGTGA 1 chr7:45808632-45808712 ( 3) TCACAAGA 1 chr5:112073475-112073555 ( 71) ACATGTGG 1 chr7:150759522-150759602 ( 46) CCACATGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.10599 E= 3.9e-027 -159 -52 -187 193 -1285 161 -1285 -1285 260 -460 -1285 -1285 -1285 118 -151 -27 -127 -202 130 -1285 -200 -1285 -1285 255 -1285 -1285 151 -359 200 -260 -43 -201 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 74 E= 3.9e-027 0.054054 0.229730 0.094595 0.621622 0.000000 1.000000 0.000000 0.000000 0.986486 0.013514 0.000000 0.000000 0.000000 0.743243 0.121622 0.135135 0.067568 0.081081 0.851351 0.000000 0.040541 0.000000 0.000000 0.959459 0.000000 0.000000 0.986486 0.013514 0.648649 0.054054 0.256757 0.040541 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCACGTGA MEME-2 regular expression -------------------------------------------------------------------------------- [TC]CACGTG[AG] -------------------------------------------------------------------------------- Time 8.54 secs. ******************************************************************************** ******************************************************************************** MOTIF ACCAATCA MEME-3 width = 8 sites = 8 llr = 93 E-value = 6.5e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 8::aa::a pos.-specific C :a9:::a: probability G :::::::: matrix T 3:1::a:: bits 2.6 *** * 2.4 *** * 2.1 *** * 1.8 * *** * Relative 1.6 ** ***** Entropy 1.3 ******** (16.7 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ACCAATCA consensus T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:54619061-54619141 20 4.10e-06 GCGAGCGGGG ACCAATCA GAGAGTAGCT chr3:9143085-9143165 61 4.10e-06 cccgtgctgg accaatca cagaccaaaa chr12:131678807-13167888 66 4.10e-06 cccaggctca accaatca gaAGTCT chr21:47442566-47442646 48 4.10e-06 gcatctctaa accaatca caggctagAT chr14:92573020-92573100 6 4.10e-06 CGCAG ACCAATCA CCCGTGAGGA chr12:120755516-12075559 4 8.20e-06 ATA TCCAATCA CAATCACATC chr4:1513542-1513622 27 8.20e-06 gcccaggcca tccaatca tagtgctcca chr1:12156154-12156234 11 1.02e-05 cccatactaa actaatca cagtggtgag -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:54619061-54619141 4.1e-06 19_[+3]_53 chr3:9143085-9143165 4.1e-06 60_[+3]_12 chr12:131678807-13167888 4.1e-06 65_[+3]_7 chr21:47442566-47442646 4.1e-06 47_[+3]_25 chr14:92573020-92573100 4.1e-06 5_[+3]_67 chr12:120755516-12075559 8.2e-06 3_[+3]_69 chr4:1513542-1513622 8.2e-06 26_[+3]_46 chr1:12156154-12156234 1e-05 10_[+3]_62 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACCAATCA width=8 seqs=8 chr19:54619061-54619141 ( 20) ACCAATCA 1 chr3:9143085-9143165 ( 61) ACCAATCA 1 chr12:131678807-13167888 ( 66) ACCAATCA 1 chr21:47442566-47442646 ( 48) ACCAATCA 1 chr14:92573020-92573100 ( 6) ACCAATCA 1 chr12:120755516-12075559 ( 4) TCCAATCA 1 chr4:1513542-1513622 ( 27) TCCAATCA 1 chr1:12156154-12156234 ( 11) ACTAATCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.8922 E= 6.5e+000 220 -965 -965 61 -965 160 -965 -965 -965 141 -965 -38 262 -965 -965 -965 262 -965 -965 -965 -965 -965 -965 261 -965 160 -965 -965 262 -965 -965 -965 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 6.5e+000 0.750000 0.000000 0.000000 0.250000 0.000000 1.000000 0.000000 0.000000 0.000000 0.875000 0.000000 0.125000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACCAATCA MEME-3 regular expression -------------------------------------------------------------------------------- [AT]CCAATCA -------------------------------------------------------------------------------- Time 11.97 secs. ******************************************************************************** ******************************************************************************** MOTIF TCTSATTG MEME-4 width = 8 sites = 10 llr = 106 E-value = 5.2e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::::a::: pos.-specific C :a:4:1:: probability G 2::6:::a matrix T 8:a::9a: bits 2.6 * * * 2.4 * * * 2.1 * *** 1.8 * *** Relative 1.6 *** **** Entropy 1.3 *** **** (15.3 bits) 1.0 *** **** 0.8 *** **** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TCTGATTG consensus G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr17:79296783-79296863 55 4.51e-06 CAGGGCCTCC TCTGATTG GCCATCCTGG chr16:69440963-69441043 62 4.51e-06 aacaggcttc tctgattg gacagagtgg chr1:12156154-12156234 42 4.51e-06 catggagtac tctgattg gcctgcttgg chr2:110962559-110962639 4 4.51e-06 TGC TCTGATTG CTCCAGTTGC chr7:23145262-23145342 31 8.80e-06 GTGCCTGCAG TCTCATTG CTCGGAACGG chr21:47442566-47442646 10 8.80e-06 gtccttgca tctcattg gctggagggg chr1:15296788-15296868 4 8.80e-06 ata tctcattg gccaaagcaa chr3:48488047-48488127 64 1.83e-05 CCGCCTGCCA GCTGATTG GCCCCTGGG chr7:93633660-93633740 48 2.74e-05 TCACCACGGC GCTCATTG GAGCCCTGGG chrX:101914782-101914862 6 3.65e-05 TGTCT TCTGACTG TCATGCAGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:79296783-79296863 4.5e-06 54_[+4]_18 chr16:69440963-69441043 4.5e-06 61_[+4]_11 chr1:12156154-12156234 4.5e-06 41_[+4]_31 chr2:110962559-110962639 4.5e-06 3_[+4]_69 chr7:23145262-23145342 8.8e-06 30_[+4]_42 chr21:47442566-47442646 8.8e-06 9_[+4]_63 chr1:15296788-15296868 8.8e-06 3_[+4]_69 chr3:48488047-48488127 1.8e-05 63_[+4]_9 chr7:93633660-93633740 2.7e-05 47_[+4]_25 chrX:101914782-101914862 3.7e-05 5_[+4]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCTSATTG width=8 seqs=10 chr17:79296783-79296863 ( 55) TCTGATTG 1 chr16:69440963-69441043 ( 62) TCTGATTG 1 chr1:12156154-12156234 ( 42) TCTGATTG 1 chr2:110962559-110962639 ( 4) TCTGATTG 1 chr7:23145262-23145342 ( 31) TCTCATTG 1 chr21:47442566-47442646 ( 10) TCTCATTG 1 chr1:15296788-15296868 ( 4) TCTCATTG 1 chr3:48488047-48488127 ( 64) GCTGATTG 1 chr7:93633660-93633740 ( 48) GCTCATTG 1 chrX:101914782-101914862 ( 6) TCTGACTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 11.0846 E= 5.2e+002 -997 -997 -79 229 -997 160 -997 -997 -997 -997 -997 261 -997 28 80 -997 262 -997 -997 -997 -997 -171 -997 246 -997 -997 -997 261 -997 -997 153 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 5.2e+002 0.000000 0.000000 0.200000 0.800000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.600000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCTSATTG MEME-4 regular expression -------------------------------------------------------------------------------- [TG]CT[GC]ATTG -------------------------------------------------------------------------------- Time 15.39 secs. ******************************************************************************** ******************************************************************************** MOTIF AGAAAAAA MEME-5 width = 8 sites = 2 llr = 28 E-value = 4.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a:aaaaaa pos.-specific C :::::::: probability G :a:::::: matrix T :::::::: bits 2.6 * ****** 2.4 * ****** 2.1 * ****** 1.8 * ****** Relative 1.6 ******** Entropy 1.3 ******** (19.9 bits) 1.0 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel AGAAAAAA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr5:150827082-150827162 11 1.05e-06 GAGCTCAGTG AGAAAAAA GGCGCGGCCG chr19:17721344-17721424 65 1.05e-06 atgaggtgag agaaaaaa atcacgtg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:150827082-150827162 1.1e-06 10_[+5]_62 chr19:17721344-17721424 1.1e-06 64_[+5]_8 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGAAAAAA width=8 seqs=2 chr5:150827082-150827162 ( 11) AGAAAAAA 1 chr19:17721344-17721424 ( 65) AGAAAAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.1555 E= 4.5e+003 261 -765 -765 -765 -765 -765 153 -765 261 -765 -765 -765 261 -765 -765 -765 261 -765 -765 -765 261 -765 -765 -765 261 -765 -765 -765 261 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 4.5e+003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGAAAAAA MEME-5 regular expression -------------------------------------------------------------------------------- AGAAAAAA -------------------------------------------------------------------------------- Time 18.82 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:52444008-52444088 5.47e-01 80 chr12:54332412-54332492 5.97e-03 41_[+1(4.66e-05)]_31 chr17:46688348-46688428 1.59e-04 53_[+2(5.12e-05)]_6_[+2(5.12e-05)]_\ 5 chr14:92573020-92573100 4.37e-05 5_[+3(4.10e-06)]_49_[+2(8.28e-05)]_\ 10 chr16:86588781-86588861 1.43e-01 59_[+1(5.56e-05)]_13 chr17:78075277-78075357 8.21e-04 25_[+1(9.09e-06)]_37_[+1(9.09e-06)]_\ 2 chr12:121342188-12134226 7.24e-05 31_[+1(9.09e-06)]_41 chr6:52463178-52463258 3.49e-01 80 chr14:24769009-24769089 1.72e-01 80 chr6:158653157-158653237 1.12e-02 9_[+1(4.66e-05)]_5_[+1(4.66e-05)]_\ 50 chr10:113943506-11394358 7.37e-01 80 chr16:58718636-58718716 5.56e-03 17_[+2(8.28e-05)]_7_[+2(5.55e-05)]_\ 40 chrX:136520464-136520544 2.79e-01 80 chrX:101975580-101975660 2.04e-05 8_[+4(6.45e-05)]_5_[+1(4.66e-05)]_\ 13_[+2(1.36e-05)]_30 chr1:15296788-15296868 7.65e-06 3_[+4(8.80e-06)]_11_[+2(7.37e-05)]_\ 12_[+1(4.66e-05)]_30 chr2:240964750-240964830 2.47e-01 49_[+1(5.56e-05)]_23 chr17:4699361-4699441 1.14e-01 80 chr13:50159667-50159747 4.23e-04 50_[+1(4.66e-05)]_11_[+1(9.09e-06)]_\ 3 chr2:110962559-110962639 3.97e-03 3_[+4(4.51e-06)]_69 chr1:15930148-15930228 6.11e-04 1_[+1(9.09e-06)]_71 chr2:33141309-33141389 1.00e+00 80 chr16:2570292-2570372 1.76e-03 17_[+1(4.66e-05)]_9_[+1(4.66e-05)]_\ 24_[+1(4.66e-05)]_6 chr7:45808632-45808712 2.57e-02 22_[+1(5.56e-05)]_50 chr1:173446149-173446229 5.45e-03 45_[+1(7.78e-05)]_27 chr2:68290109-68290189 6.21e-01 80 chr2:95705316-95705396 9.44e-01 80 chr9:71394876-71394956 4.60e-01 80 chr2:220042891-220042971 3.28e-04 32_[+1(9.09e-06)]_19_[+1(9.09e-06)]_\ 13 chr9:135753653-135753733 6.77e-01 80 chr22:26879772-26879852 1.46e-01 69_[+1(5.56e-05)]_3 chr17:8152575-8152655 6.60e-02 80 chr16:5083887-5083967 7.07e-04 62_[+1(9.09e-06)]_10 chr17:17380283-17380363 2.94e-01 80 chr11:506796-506876 6.09e-01 80 chr17:72511031-72511111 1.08e-04 5_[+1(9.09e-06)]_9_[+2(5.55e-05)]_9_\ [+1(9.09e-06)]_24_[+2(1.36e-05)]_1 chr11:777496-777576 3.08e-02 80 chr1:4124319-4124399 9.97e-02 80 chr2:44001128-44001208 3.27e-01 80 chr9:140009128-140009208 6.87e-03 58_[+1(4.66e-05)]_14 chr3:158519777-158519857 3.09e-04 49_[+1(9.09e-06)]_10_[+2(1.36e-05)]_\ 5 chr21:47442566-47442646 1.52e-07 9_[+4(8.80e-06)]_12_[+1(7.78e-05)]_\ 10_[+3(4.10e-06)]_25 chr3:51428570-51428650 1.07e-02 64_[+1(4.66e-05)]_8 chr17:73267318-73267398 6.43e-01 80 chr5:172410724-172410804 9.67e-03 21_[+1(4.66e-05)]_51 chr19:36103594-36103674 1.51e-02 12_[+1(5.56e-05)]_15_[+1(5.56e-05)]_\ 37 chr22:46431899-46431979 9.56e-01 80 chr17:38083851-38083931 9.77e-01 80 chr7:23145262-23145342 1.70e-03 30_[+4(8.80e-06)]_42 chr4:8442468-8442548 3.99e-02 5_[+1(5.56e-05)]_67 chr5:1345226-1345306 2.08e-01 80 chr22:50683418-50683498 4.74e-01 80 chr1:70671262-70671342 9.70e-01 80 chr16:71879828-71879908 9.15e-01 80 chr4:119512803-119512883 7.08e-02 20_[+1(2.73e-05)]_8_[+1(5.56e-05)]_\ 17_[+1(5.56e-05)]_11 chr4:47465661-47465741 1.09e-02 31_[+1(7.78e-05)]_41 chr6:126661223-126661303 1.28e-01 80 chr19:40324843-40324923 2.32e-04 14_[+1(9.09e-06)]_58 chr4:1513542-1513622 2.25e-03 26_[+3(8.20e-06)]_46 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chr17:79519371-79519451 7.15e-01 80 chr4:153457345-153457425 4.61e-01 80 chr7:150759522-150759602 9.39e-02 80 chr16:4897373-4897453 1.63e-03 15_[+1(5.56e-05)]_57 chr16:9233909-9233989 6.24e-02 80 chr21:38738870-38738950 1.50e-04 24_[+1(9.09e-06)]_48 chr13:45563620-45563700 2.42e-01 80 chr19:59084902-59084982 2.87e-01 80 chr12:65153184-65153264 3.36e-04 21_[+1(9.09e-06)]_32_[+1(9.09e-06)]_\ 11 chr1:228296951-228297031 1.21e-01 80 chr15:99408693-99408773 6.27e-03 9_[+2(5.12e-05)]_27_[+1(4.66e-05)]_\ 28 chrX:101914782-101914862 5.96e-05 5_[+4(3.65e-05)]_23_[+4(6.45e-05)]_\ 5_[+1(4.66e-05)]_23 chr17:8095548-8095628 1.88e-03 80 chr11:67195865-67195945 7.67e-01 80 chr18:77439744-77439824 2.58e-01 37_[+1(5.56e-05)]_35 chr6:43027158-43027238 3.44e-02 80 chr19:51373846-51373926 8.60e-02 80 chr19:36036446-36036526 5.89e-02 12_[+1(5.56e-05)]_60 chr19:36119917-36119997 5.15e-01 80 chr8:145743294-145743374 8.64e-01 80 chr1:28559502-28559582 3.06e-04 23_[+2(5.12e-05)]_21_[+1(9.09e-06)]_\ 20 chr11:75525836-75525916 5.19e-04 30_[+2(6.50e-05)]_42 chr17:1627987-1628067 1.40e-01 80 chr1:11866202-11866282 4.49e-05 24_[+2(5.12e-05)]_15_[+1(9.09e-06)]_\ 25 chr16:88923465-88923545 5.44e-04 57_[+1(9.09e-06)]_15 chr9:6757894-6757974 3.24e-05 14_[+2(5.12e-05)]_24_[+1(9.09e-06)]_\ 26 chr19:2427888-2427968 1.75e-04 59_[+1(9.09e-06)]_13 chrX:347679-347759 1.05e-02 7_[+1(2.73e-05)]_65 chr4:123073406-123073486 3.83e-01 80 chr22:23063990-23064070 7.30e-01 80 chr6:158981095-158981175 5.99e-01 80 chr15:79165123-79165203 9.55e-01 80 chr19:5340953-5341033 6.25e-03 42_[+1(4.66e-05)]_30 chr3:48488047-48488127 2.80e-02 63_[+4(1.83e-05)]_9 chr1:44440527-44440607 5.74e-03 46_[+1(4.66e-05)]_10_[+1(4.66e-05)]_\ 8 chr7:55433988-55434068 6.06e-02 8_[+1(5.56e-05)]_64 chr1:12156154-12156234 1.70e-07 10_[+3(1.02e-05)]_23_[+4(4.51e-06)]_\ 31 chr12:108956309-10895638 9.98e-01 80 chr11:118307006-11830708 7.80e-01 80 chr9:94877695-94877775 3.92e-01 80 chr11:61500999-61501079 1.66e-03 29_[+1(4.66e-05)]_43 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chr2:85788612-85788692 9.34e-01 80 chr8:144623672-144623752 8.91e-01 80 chr1:243265030-243265110 1.48e-01 57_[+1(5.56e-05)]_15 chr19:7587418-7587498 9.60e-04 49_[+1(9.09e-06)]_23 chr7:4815203-4815283 6.75e-04 [+2(1.36e-05)]_36_[+1(9.09e-06)]_28 chr9:97488924-97489004 2.16e-01 25_[+1(5.56e-05)]_47 chr9:117349945-117350025 2.25e-04 44_[+1(9.09e-06)]_28 chr16:67596216-67596296 2.65e-01 80 chr21:46238012-46238092 1.00e-02 22_[+1(4.66e-05)]_50 chr1:9489021-9489101 5.73e-03 21_[+1(5.56e-05)]_51 chr6:84937339-84937419 5.06e-03 47_[+2(5.55e-05)]_10_[+1(4.66e-05)]_\ 7 chr8:126103991-126104071 6.80e-04 28_[+2(5.55e-05)]_28_[+2(1.36e-05)]_\ 8 chr14:20929769-20929849 3.18e-03 13_[+2(5.55e-05)]_59 chr6:44225034-44225114 5.47e-04 49_[+1(4.66e-05)]_13_[+1(9.09e-06)]_\ 2 chr16:84178734-84178814 1.07e-03 44_[+1(9.09e-06)]_28 chr19:49458034-49458114 9.91e-04 3_[+1(9.09e-06)]_40_[+2(5.12e-05)]_\ 21 chr7:73097885-73097965 1.13e-02 80 chr16:89766689-89766769 2.35e-02 61_[+1(5.56e-05)]_11 chr2:96068377-96068457 1.01e-01 57_[+1(5.56e-05)]_15 chr16:790981-791061 3.90e-01 80 chr14:32030564-32030644 2.95e-02 16_[+1(5.56e-05)]_56 chr1:16893154-16893234 1.91e-01 80 chrX:70288314-70288394 1.91e-01 30_[+4(6.45e-05)]_42 chr19:47759736-47759816 9.08e-03 30_[+1(4.66e-05)]_42 chr5:112073475-112073555 4.28e-03 80 chr11:61684986-61685066 9.89e-03 48_[+1(4.66e-05)]_24 chr7:1199800-1199880 7.10e-01 80 chr4:1340750-1340830 3.03e-01 80 chr20:37590793-37590873 8.36e-03 8_[+1(4.66e-05)]_44_[+1(4.66e-05)]_\ 12 chr10:102027368-10202744 2.88e-03 62_[+3(3.53e-05)]_10 chr9:140083018-140083098 4.00e-01 80 chr15:73076086-73076166 4.79e-01 80 chr2:29093163-29093243 8.62e-01 80 chr16:67260959-67261039 8.91e-01 80 chr11:116969245-11696932 3.07e-02 80 chr16:33569491-33569571 1.39e-03 50_[+1(4.66e-05)]_22 chr5:141392574-141392654 1.15e-02 42_[+1(4.66e-05)]_30 chr16:90039167-90039247 2.35e-01 80 chr1:210001280-210001360 6.25e-02 80 chr9:139760838-139760918 3.47e-01 80 chr15:63481567-63481647 2.03e-01 80 chr19:17721344-17721424 2.22e-06 64_[+5(1.05e-06)]_8 chr9:131709862-131709942 5.05e-04 37_[+1(9.09e-06)]_35 chr17:7232736-7232816 2.75e-01 80 chr3:122512637-122512717 1.10e-04 37_[+1(4.66e-05)]_3_[+1(9.09e-06)]_\ 24 chr16:2021990-2022070 5.02e-01 80 chr9:140411378-140411458 7.91e-03 80 chr17:79296783-79296863 2.53e-07 1_[+4(1.83e-05)]_21_[+1(9.09e-06)]_\ 16_[+4(4.51e-06)]_18 chr12:112856673-11285675 3.59e-01 80 chr5:150827082-150827162 2.56e-08 10_[+5(1.05e-06)]_54_[+1(9.09e-06)] chr9:99179673-99179753 4.94e-04 34_[+1(9.09e-06)]_38 chr9:33290395-33290475 1.04e-01 12_[+1(5.56e-05)]_60 chr21:45209339-45209419 2.68e-01 62_[+1(5.56e-05)]_10 chr3:53164429-53164509 2.53e-01 80 chr22:23081988-23082068 4.49e-01 80 chr3:5562026-5562106 1.60e-02 80 chr15:72668351-72668431 5.83e-05 11_[+2(6.50e-05)]_27_[+1(9.09e-06)]_\ 26 chr18:13726612-13726692 6.38e-03 23_[+2(5.12e-05)]_49 chr12:120755516-12075559 6.23e-04 3_[+3(8.20e-06)]_69 chr13:113951360-11395144 7.84e-03 [+1(4.66e-05)]_42_[+1(7.78e-05)]_22 chr10:31607953-31608033 3.82e-01 80 chr3:33839999-33840079 6.48e-04 16_[+1(9.09e-06)]_56 chr1:21023482-21023562 1.56e-03 80 chr1:36107109-36107189 3.19e-01 80 chr19:59086758-59086838 9.83e-01 80 chr12:132628889-13262896 2.28e-01 80 chr11:65255196-65255276 7.32e-03 80 chr19:7694422-7694502 3.73e-02 80 chr17:33914212-33914292 1.94e-02 42_[+1(5.56e-05)]_15_[+1(5.56e-05)]_\ 7 chr1:1510252-1510332 1.64e-01 80 chr17:1733185-1733265 6.45e-03 14_[+1(4.66e-05)]_58 chr10:46222591-46222671 2.14e-04 47_[+1(9.09e-06)]_7_[+1(9.09e-06)]_\ 10 chr16:86939035-86939115 1.10e-03 40_[+1(4.66e-05)]_22_[+1(4.66e-05)]_\ 2 chr19:30097140-30097220 7.23e-01 80 chr16:28503395-28503475 4.52e-03 80 chr20:23338736-23338816 2.64e-01 80 chr3:9143085-9143165 9.79e-08 42_[+1(9.09e-06)]_10_[+3(4.10e-06)]_\ 12 chr8:145692227-145692307 2.16e-02 80 chr11:60609482-60609562 1.25e-01 41_[+1(5.56e-05)]_31 chr3:16306450-16306530 2.48e-01 80 chr1:29557437-29557517 5.50e-01 80 chr2:26987114-26987194 1.52e-04 9_[+1(9.09e-06)]_63 chr11:118938424-11893850 2.96e-04 47_[+2(5.12e-05)]_14_[+1(9.09e-06)]_\ 3 chr19:54619061-54619141 5.19e-03 19_[+3(4.10e-06)]_53 chr10:46090334-46090414 9.45e-04 27_[+1(9.09e-06)]_8_[+1(7.78e-05)]_\ 29 chr16:69796140-69796220 2.95e-02 56_[+2(6.50e-05)]_16 chr9:139844574-139844654 1.05e-04 34_[+3(4.10e-06)]_38 chr17:6939079-6939159 4.07e-03 62_[+1(4.66e-05)]_10 chr12:120884161-12088424 1.78e-01 80 chr12:28343257-28343337 1.16e-02 54_[+2(5.12e-05)]_18 chr12:1058957-1059037 5.05e-01 80 chr1:11986462-11986542 3.73e-01 80 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (5) found. ******************************************************************************** CPU: c22n05.farnam.hpc.yale.internal ********************************************************************************