******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800) For further information on how to interpret these results please access https://meme-suite.org/meme. To get a copy of the MEME Suite software please access https://meme-suite.org. ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** PRIMARY SEQUENCES= ../result/final_prediction/K562/fasta/RankLinear0.6_40/AGO1.fasta CONTROL SEQUENCES= --none-- ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr17:76107972-76108052 1.0000 80 chr17:79859850-79859930 1.0000 80 chr17:4437986-4438066 1.0000 80 chr1:3694422-3694502 1.0000 80 chr16:1829833-1829913 1.0000 80 chr1:3697612-3697692 1.0000 80 chr16:89762017-89762097 1.0000 80 chr5:176734889-176734969 1.0000 80 chr16:1830100-1830180 1.0000 80 chr16:731195-731275 1.0000 80 chr2:97540438-97540518 1.0000 80 chr2:97542038-97542118 1.0000 80 chr2:97543684-97543764 1.0000 80 chr17:4436552-4436632 1.0000 80 chr8:144683636-144683716 1.0000 80 chr9:139693980-139694060 1.0000 80 chr12:132340414-13234049 1.0000 80 chr19:3536887-3536967 1.0000 80 chr16:88874575-88874655 1.0000 80 chr11:860447-860527 1.0000 80 chr19:866467-866547 1.0000 80 chr19:2413808-2413888 1.0000 80 chr11:65637601-65637681 1.0000 80 chr5:180661217-180661297 1.0000 80 chr16:637246-637326 1.0000 80 chr11:63992308-63992388 1.0000 80 chr22:41921513-41921593 1.0000 80 chr19:54677974-54678054 1.0000 80 chr17:72207529-72207609 1.0000 80 chrX:1538073-1538153 1.0000 80 chr19:1065392-1065472 1.0000 80 chr9:130690382-130690462 1.0000 80 chr11:65363187-65363267 1.0000 80 chr8:144684701-144684781 1.0000 80 chr19:55963576-55963656 1.0000 80 chr11:71951219-71951299 1.0000 80 chr11:63990581-63990661 1.0000 80 chr17:79501204-79501284 1.0000 80 chr21:46929572-46929652 1.0000 80 chr22:20097606-20097686 1.0000 80 chr8:41511151-41511231 1.0000 80 chr8:145536997-145537077 1.0000 80 chr19:51296927-51297007 1.0000 80 chr19:13206372-13206452 1.0000 80 chr5:675599-675679 1.0000 80 chr17:4437500-4437580 1.0000 80 chr19:866963-867043 1.0000 80 chr17:79503584-79503664 1.0000 80 chr19:46285492-46285572 1.0000 80 chr18:75680811-75680891 1.0000 80 chr17:76108279-76108359 1.0000 80 chr19:59073780-59073860 1.0000 80 chr1:155255630-155255710 1.0000 80 chr1:155257927-155258007 1.0000 80 chr9:139570188-139570268 1.0000 80 chr19:58982456-58982536 1.0000 80 chr6:16760865-16760945 1.0000 80 chr1:1292449-1292529 1.0000 80 chr20:62329692-62329772 1.0000 80 chr19:51015640-51015720 1.0000 80 chr16:3024206-3024286 1.0000 80 chr16:89661891-89661971 1.0000 80 chr21:44474027-44474107 1.0000 80 chr11:67206121-67206201 1.0000 80 chr19:58983348-58983428 1.0000 80 chr11:862613-862693 1.0000 80 chr8:145750195-145750275 1.0000 80 chr22:19958777-19958857 1.0000 80 chr19:49472102-49472182 1.0000 80 chr1:156612148-156612228 1.0000 80 chr1:202146806-202146886 1.0000 80 chr5:673866-673946 1.0000 80 chr2:85774419-85774499 1.0000 80 chr19:871093-871173 1.0000 80 chr21:45750417-45750497 1.0000 80 chr16:773464-773544 1.0000 80 chr19:5892131-5892211 1.0000 80 chr5:677004-677084 1.0000 80 chr9:140508669-140508749 1.0000 80 chrX:49028442-49028522 1.0000 80 chr20:61446315-61446395 1.0000 80 chr17:78942967-78943047 1.0000 80 chr16:571561-571641 1.0000 80 chr19:1471036-1471116 1.0000 80 chr3:195771505-195771585 1.0000 80 chr8:144654915-144654995 1.0000 80 chr11:840383-840463 1.0000 80 chr3:129032357-129032437 1.0000 80 chr22:50638819-50638899 1.0000 80 chr2:97545351-97545431 1.0000 80 chr11:6494966-6495046 1.0000 80 chr19:17004477-17004557 1.0000 80 chr11:67401750-67401830 1.0000 80 chr11:865794-865874 1.0000 80 chr21:45562949-45563029 1.0000 80 chr10:135163139-13516321 1.0000 80 chr19:7600117-7600197 1.0000 80 chr16:635509-635589 1.0000 80 chr19:50361541-50361621 1.0000 80 chr19:50004051-50004131 1.0000 80 chr22:19959029-19959109 1.0000 80 chr17:4439386-4439466 1.0000 80 chr16:851709-851789 1.0000 80 chr4:951926-952006 1.0000 80 chr6:68588813-68588893 1.0000 80 chr19:2230983-2231063 1.0000 80 chr11:67805885-67805965 1.0000 80 chr16:57507238-57507318 1.0000 80 chr7:100168933-100169013 1.0000 80 chr19:49522921-49523001 1.0000 80 chr19:1456624-1456704 1.0000 80 chr17:43000192-43000272 1.0000 80 chr17:79889169-79889249 1.0000 80 chr16:89783881-89783961 1.0000 80 chr11:64981556-64981636 1.0000 80 chr11:824512-824592 1.0000 80 chrX:1501348-1501428 1.0000 80 chr16:636883-636963 1.0000 80 chr17:76111316-76111396 1.0000 80 chr20:62487148-62487228 1.0000 80 chr16:89789848-89789928 1.0000 80 chr17:4438369-4438449 1.0000 80 chr16:2053048-2053128 1.0000 80 chr9:139613915-139613995 1.0000 80 chr19:5693419-5693499 1.0000 80 chr1:1226786-1226866 1.0000 80 chr7:44104876-44104956 1.0000 80 chr19:12777525-12777605 1.0000 80 chr8:144897435-144897515 1.0000 80 chr8:145536468-145536548 1.0000 80 chr19:4446522-4446602 1.0000 80 chr20:62331817-62331897 1.0000 80 chr16:89223292-89223372 1.0000 80 chr11:64880642-64880722 1.0000 80 chr19:19040325-19040405 1.0000 80 chr19:50360458-50360538 1.0000 80 chr11:64010785-64010865 1.0000 80 chr17:16347183-16347263 1.0000 80 chr16:2030881-2030961 1.0000 80 chr19:58908032-58908112 1.0000 80 chr2:232579541-232579621 1.0000 80 chr16:774780-774860 1.0000 80 chr8:144681709-144681789 1.0000 80 chr9:131585068-131585148 1.0000 80 chr1:878241-878321 1.0000 80 chr11:298550-298630 1.0000 80 chr11:531343-531423 1.0000 80 chr19:54675765-54675845 1.0000 80 chr9:127618721-127618801 1.0000 80 chr16:850842-850922 1.0000 80 chr19:49116530-49116610 1.0000 80 chr16:419900-419980 1.0000 80 chr16:766923-767003 1.0000 80 chr16:2261066-2261146 1.0000 80 chr8:145538001-145538081 1.0000 80 chr4:757832-757912 1.0000 80 chr21:45560693-45560773 1.0000 80 chr4:675985-676065 1.0000 80 chr17:79496132-79496212 1.0000 80 chr9:139256972-139257052 1.0000 80 chr1:1227017-1227097 1.0000 80 chr17:76168369-76168449 1.0000 80 chr8:145096098-145096178 1.0000 80 chr19:56156338-56156418 1.0000 80 chr19:7981064-7981144 1.0000 80 chr17:79891070-79891150 1.0000 80 chr19:7978135-7978215 1.0000 80 chr16:2570812-2570892 1.0000 80 chr19:14272206-14272286 1.0000 80 chr16:2200892-2200972 1.0000 80 chr17:40932969-40933049 1.0000 80 chr9:139566553-139566633 1.0000 80 chr22:50649034-50649114 1.0000 80 chr11:862818-862898 1.0000 80 chr11:64880440-64880520 1.0000 80 chr17:72208560-72208640 1.0000 80 chr19:7979185-7979265 1.0000 80 chr1:3695698-3695778 1.0000 80 chr7:100276347-100276427 1.0000 80 chr19:58982846-58982926 1.0000 80 chr8:145095086-145095166 1.0000 80 chr8:145154275-145154355 1.0000 80 chr19:41119039-41119119 1.0000 80 chr6:31496723-31496803 1.0000 80 chr19:18546133-18546213 1.0000 80 chr1:155290710-155290790 1.0000 80 chr9:140509092-140509172 1.0000 80 chr22:20100800-20100880 1.0000 80 chr17:1613961-1614041 1.0000 80 chr5:674165-674245 1.0000 80 chr16:850583-850663 1.0000 80 chr17:79857806-79857886 1.0000 80 chr3:183978877-183978957 1.0000 80 chr19:1260358-1260438 1.0000 80 chr3:52557479-52557559 1.0000 80 chr4:1022829-1022909 1.0000 80 chr8:128754677-128754757 1.0000 80 chr16:3021590-3021670 1.0000 80 chr9:131768794-131768874 1.0000 80 chr17:42393954-42394034 1.0000 80 chr8:142443572-142443652 1.0000 80 chr16:780442-780522 1.0000 80 chr14:104004804-10400488 1.0000 80 chr17:16347387-16347467 1.0000 80 chr16:1828424-1828504 1.0000 80 chr9:140114922-140115002 1.0000 80 chr7:100276147-100276227 1.0000 80 chr19:50358308-50358388 1.0000 80 chr5:180661477-180661557 1.0000 80 chr1:1471571-1471651 1.0000 80 chr4:1022614-1022694 1.0000 80 chr11:281596-281676 1.0000 80 chr1:3695467-3695547 1.0000 80 chr9:139746738-139746818 1.0000 80 chr9:140139524-140139604 1.0000 80 chr4:756189-756269 1.0000 80 chr19:56000787-56000867 1.0000 80 chr19:51165592-51165672 1.0000 80 chr8:142451621-142451701 1.0000 80 chr11:45928637-45928717 1.0000 80 chr11:860829-860909 1.0000 80 chr3:49756641-49756721 1.0000 80 chr17:79219792-79219872 1.0000 80 chr11:65620127-65620207 1.0000 80 chr8:145150759-145150839 1.0000 80 chr16:776476-776556 1.0000 80 chr19:1496391-1496471 1.0000 80 chr19:1395479-1395559 1.0000 80 chr22:41923166-41923246 1.0000 80 chr11:62455531-62455611 1.0000 80 chr12:57630146-57630226 1.0000 80 chr22:19960981-19961061 1.0000 80 chr16:851244-851324 1.0000 80 chr21:46926221-46926301 1.0000 80 chr8:145101695-145101775 1.0000 80 chr21:46927343-46927423 1.0000 80 chr17:74268453-74268533 1.0000 80 chr2:97548097-97548177 1.0000 80 chr19:29106911-29106991 1.0000 80 chr17:74076256-74076336 1.0000 80 chr3:38048063-38048143 1.0000 80 chr3:127392133-127392213 1.0000 80 chr19:8389566-8389646 1.0000 80 chr9:140068805-140068885 1.0000 80 chr16:85128459-85128539 1.0000 80 chr19:3537266-3537346 1.0000 80 chr19:2730282-2730362 1.0000 80 chr19:4445297-4445377 1.0000 80 chr9:138397736-138397816 1.0000 80 chr9:139735330-139735410 1.0000 80 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme -oc ../result/final_prediction/K562/inference_raw/MEME/RankLinear0.6_40_AGO1/ -dna -nmotifs 5 -w 8 -maxsize 250000 -nostatus ../result/final_prediction/K562/fasta/RankLinear0.6_40/AGO1.fasta model: mod= zoops nmotifs= 5 evt= inf objective function: em= E-value of product of p-values starts= E-value of product of p-values strands: + width: minw= 8 maxw= 8 nsites: minsites= 2 maxsites= 250 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 trim: wg= 11 ws= 1 endgaps= yes data: n= 20000 N= 250 sample: seed= 0 hsfrac= 0 searchsize= 20000 norand= no csites= 1000 Letter frequencies in dataset: A 0.16 C 0.336 G 0.348 T 0.156 Background letter frequencies (from file dataset with add-one prior applied): A 0.16 C 0.335 G 0.348 T 0.156 Background model order: 0 ******************************************************************************** ******************************************************************************** MOTIF CWGSSCWG MEME-1 width = 8 sites = 129 llr = 815 E-value = 6.5e-017 ******************************************************************************** -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 Description -------------------------------------------------------------------------------- Simplified A :6:11:4: pos.-specific C a::34a:2 probability G ::a45::8 matrix T :4:2::6: bits 2.7 2.4 2.1 1.9 Relative 1.6 *** ** Entropy 1.3 *** ** (9.1 bits) 1.1 *** ** 0.8 *** *** 0.5 *** *** 0.3 *** **** 0.0 -------- Multilevel CAGGGCTG consensus T CC AC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr16:85128459-85128539 55 5.95e-05 CCCCAGACCC CAGGGCTG AGATGCAAGG chr11:860829-860909 40 5.95e-05 AGGGATCCCC CAGGGCTG CGCGGCCCTT chr4:756189-756269 61 5.95e-05 cccagcaggg cagtgctg ggagttaggg chr5:674165-674245 32 5.95e-05 GCCGGCCCTG CAGGGCTG ACGGCCCCTG chr8:145538001-145538081 38 5.95e-05 ACCCCCAGTG CAGGGCTG GTCTTGGGGA chr20:61446315-61446395 41 5.95e-05 GGACAGCAGG CAGTGCTG GCCAGCCAAC chr1:202146806-202146886 46 5.95e-05 CTCTCCCTGT CAGTGCTG TGCCAGGCAG chr9:139570188-139570268 35 5.95e-05 CGCACCTGGG CAGGGCTG GGATCAGAGC chr19:54677974-54678054 34 5.95e-05 GCCGCCCCCG CAGGGCTG ACTCCAGCCG chr11:63992308-63992388 3 5.95e-05 GC CAGTGCTG GGATCCCCCA chr19:3537266-3537346 10 9.90e-05 GCCACTCAG CAGCGCTG GGGCAGGTGC chr19:8389566-8389646 32 9.90e-05 TGGCACACAT CAGCGCTG TGGCCCCATC chr8:145150759-145150839 32 9.90e-05 GTGATGCTGT CAGCGCTG GGCATGCTGG chr9:138397736-138397816 64 2.17e-04 GCTGGGCTTC CAGGGCAG GAGGGGCCC chr2:97548097-97548177 57 2.17e-04 GGGAGTGGTG CAGGGCAG GCAGGGGTGG chr1:3695467-3695547 55 2.17e-04 AAGCCTCCAG CAGGGCAG GCCCCTGGCC chr14:104004804-10400488 16 2.17e-04 TCTGGGCACA CAGTGCAG AGTGAGCTGT chr19:1260358-1260438 20 2.17e-04 TCACCGACGC CAGGCCTG GGGTCAAGGC chr9:140509092-140509172 7 2.17e-04 CCCGGC CAGGCCTG GGGCTGCCTC chr16:89223292-89223372 2 2.17e-04 C CAGGCCTG AGGCAGCTCA chr9:139613915-139613995 27 2.17e-04 GAGGCAGCAG CAGTGCAG GGCCAGTCCC chr22:19959029-19959109 23 2.17e-04 TGCACACACA CAGGCCTG CACAGGAAGC chr19:50004051-50004131 11 2.17e-04 CCCTGTCCCC CAGGCCTG TACCAGGGTC chr21:45562949-45563029 53 2.17e-04 GCTCCCGTGG CAGGGCAG CCTGGGGTCA chr19:5892131-5892211 9 2.17e-04 GCGCCTGG CAGGCCTG CGCCAACCCT chr16:3024206-3024286 7 2.17e-04 GGGGAG CAGGGCAG GCAGCCGCCA chr19:51015640-51015720 33 2.17e-04 TGGGGGCAGC CAGGGCAG CCGCCGCCAT chr17:76108279-76108359 47 2.17e-04 CTGGTCCCCG CAGGCCTG GAGCCCTGGG chr9:130690382-130690462 27 2.17e-04 CGCCGGGGCC CAGGGCAG CCTGATAGTC chr16:637246-637326 15 2.17e-04 TGCCCCTGCC CAGGCCTG GCTTGGCCAT chr8:144683636-144683716 19 2.17e-04 TCTGCTCTGC CAGGCCTG CCTCCAGGGC chr17:76107972-76108052 58 2.17e-04 CTGGTCCCCG CAGGCCTG GAGCACTGGG chr19:56000787-56000867 62 2.75e-04 CTGCCGGCAG CTGGGCTG CGGAGGGGCA chr19:7981064-7981144 16 2.75e-04 GGCTCAGTTG CTGGGCTG TGCGAGTCCC chr8:145096098-145096178 7 2.75e-04 TCTCAC CTGGGCTG ACGAGACCCT chr16:850842-850922 7 2.75e-04 GATAGC CTGTGCTG CCCCCTCCCC chrX:1538073-1538153 53 2.75e-04 TCAGCCGCGC CTGGGCTG CAGAGCGGGC chr9:139746738-139746818 59 3.54e-04 CGTGCGGGGC CAGCGCAG GCTGATAACC chr22:20100800-20100880 12 3.54e-04 CCAGCAGGGC CAGCCCTG GGGAACCCCT chr8:144681709-144681789 16 3.54e-04 GAGGTGGGCC CAGCCCTG CCCCCTGCAG chr11:64880642-64880722 71 3.54e-04 CTGGTGCTGA CAGCCCTG TT chr1:1226786-1226866 12 3.54e-04 GGCCCAGAGC CAGCCCTG CCTCAGGGGC chr5:673866-673946 31 3.54e-04 TGAGCAGCTC CAGCCCTG CCTCTGGGAA chr1:1292449-1292529 64 3.54e-04 ACCTAAGGCT CAGCGCAG CCCCTGAGG chr17:79503584-79503664 37 3.54e-04 GCGGGAGGGG CAGCGCAG CAGACGCTCT chr8:142451621-142451701 40 4.70e-04 CCTGTCACTG CAGTCCAG ATACCCAGTC chr1:1471571-1471651 34 4.70e-04 CCACTTGGAG CAGAGCTG GACACAGGGA chr19:19040325-19040405 2 4.70e-04 G CTGCGCTG CCCGGCCCAC chr17:4438369-4438449 68 4.70e-04 TGGGCACCCA CAGAGCTG GCTGT chr7:100168933-100169013 6 4.70e-04 ACCGC CAGGCCAG AGCCCCTGAC chr16:635509-635589 39 4.70e-04 GGTTTGGCGC CAGAGCTG GCCAATGGAA chr19:871093-871173 67 4.70e-04 GGCTGGCAGC CAGTCCAG GCTGGG chr19:58983348-58983428 66 4.70e-04 CCTGCACCCC CAGGCCAG GTCTGTT chr21:46929572-46929652 20 4.70e-04 CCAGCCCCTG CAGAGCTG CTGGGGGTCC chr21:46927343-46927423 63 5.86e-04 GAGTCGGGTG CTGGGCAG GGAGGGCACC chr17:79219792-79219872 71 5.86e-04 CAGCCTGGGG CTGTGCAG CT chr4:1022829-1022909 11 5.86e-04 CCCGTCTCAC CTGTCCTG CCCGGGTCAC chr17:76168369-76168449 65 5.86e-04 CACACCTGCC CTGTGCAG CGGAGCCG chr9:139256972-139257052 5 5.86e-04 GTTA CTGTCCTG CCCAGGACCT chr19:54675765-54675845 51 5.86e-04 GGTGGCAGCA CTGGGCAG CTCGTTCAGC chr11:824512-824592 63 5.86e-04 GTCCGTGCCG CTGTCCTG CGCCGCCTAC chr11:67805885-67805965 64 5.86e-04 GTGCGGGGCG CTGGGCAG AACAAGGCA chr19:50361541-50361621 20 5.86e-04 CAGCTGGTGG CTGTGCAG GGACTGAGCG chr22:41921513-41921593 33 5.86e-04 TGGCCCCGAA CTGGGCAG AGCTAGATCT chr1:1227017-1227097 67 6.25e-04 GCCAGACCAG CAGCCCAG GAAGCA chr16:2261066-2261146 52 6.25e-04 GACTGGAGGG CAGCCCAG GCCCGGCCAG chr21:45750417-45750497 12 6.25e-04 CTGTTGCCCT CAGCCCAG CAGGGCCCGG chr11:62455531-62455611 72 7.66e-04 GGGGCCCCTT CTGCGCAG C chr9:140114922-140115002 15 7.66e-04 CGCGGCCCCA CAGTACTG CCGGAAGGTC chr19:41119039-41119119 56 7.66e-04 GGCCCGGGCC CTGCGCAG GTGAGCAGCA chr8:145095086-145095166 47 7.66e-04 GGCCATGTCC CAGAGCAG CCCCCTGATA chr17:79496132-79496212 5 7.66e-04 CTAC CTGCGCAG CGACGGCCGT chr8:144654915-144654995 21 7.66e-04 AAGTTGTGCC CAGGACTG ACCTAGAAGC chr9:140508669-140508749 50 7.66e-04 GGCTGGCAGC CTGCGCAG GCTCACAGGC chr19:13206372-13206452 63 7.66e-04 CTCATGCAGA CTGCCCTG CTGGGGCCGG chr11:71951219-71951299 19 7.66e-04 GTTCTGGAAC CAGACCTG CGGGCACAGG chr2:97542038-97542118 60 7.66e-04 GTGCTGCCCA CTGCCCTG CAGCTCCCCG chr5:176734889-176734969 24 7.66e-04 CTGCTGCTTG CTGCGCAG CCTCTCCTTG chr1:3694422-3694502 28 7.66e-04 CATGTCGGGT CTGCCCTG GATCTGTCTG chr16:851244-851324 29 8.99e-04 TCAGTCTGAT CTGAGCTG AGAGTGGCGG chr16:3021590-3021670 47 8.99e-04 CCCCCTCCAC CAGTGCTC GGCTCCGGGC chr17:79857806-79857886 28 8.99e-04 GGTGTGGGGC CAGTGCTC CCACTGCTTC chr4:757832-757912 21 8.99e-04 TGGGCGGGCA CAGGGCTC CTGGGCGGCG chr16:766923-767003 34 8.99e-04 TGCAGCGACG CTGAGCTG CTCCTGGCCG chr10:135163139-13516321 33 8.99e-04 CGTGCAGCCT CAGGGCTC TGTGGGCGTG chr11:67206121-67206201 28 8.99e-04 TACCCCGGCT CTGGCCAG GCTGCCGCTG chr18:75680811-75680891 38 8.99e-04 ACCTTTGGCT CTGAGCTG GCCAAAGTGC chr19:866467-866547 50 8.99e-04 GCACCCTCAC CAGTGCTC CCATCTCCTC chr7:44104876-44104956 73 9.17e-04 TGGCCCGCTT CAGCACTG chr16:57507238-57507318 40 9.17e-04 CGGTGCTCGC CAGCACTG TGGTCACTGG chr4:1022614-1022694 67 1.04e-03 GTGTGGCCAG CAGGACAG AGGGCA chr17:16347387-16347467 43 1.04e-03 GGCTTCCGGC CAGGACAG CCTTGAGGCT chr17:72208560-72208640 44 1.04e-03 CTCAGGCTGG CTGCCCAG CGCGGTTTCC chr11:64880440-64880520 20 1.04e-03 CTGTTACGCC CAGGACAG ACGCCGGGGG chr16:2200892-2200972 11 1.04e-03 CAGGTTCCAG CTGCCCAG GGCCTCAGAC chr19:866963-867043 13 1.04e-03 CACCCCTCGC CAGCGCTC CTGCACTCTG chr17:74268453-74268533 13 1.22e-03 GTGACGTCCC CAGGCCTC CTGGGCCTGC chr16:776476-776556 17 1.22e-03 AGGTGACTCC CAGGGCAC CGCCCACAGG chr11:281596-281676 2 1.22e-03 G CTGTACTG CCTGTACGAG chr3:52557479-52557559 55 1.22e-03 CCGGCCCACT CAGGCCTC AGCCTCATCA chr16:850583-850663 9 1.22e-03 CCAGGGGA CTGACCTG GGCCAGCTGA chr19:18546133-18546213 33 1.22e-03 GAAGAGGAAG CTGAGCAG GGACAGCACG chr11:298550-298630 23 1.22e-03 GGGCCAGGTG CAGGGCAC CAGTCACCAC chr8:145536997-145537077 17 1.22e-03 CGCACCCCTG CAGGGCAC AGAGCCTCCA chr16:636883-636963 41 1.29e-03 CCGGCGGCTG CTGGGCTC CCCGGGGGCA chr19:55963576-55963656 62 1.29e-03 TGGGAGGGGT CTGGGCTC CCAGGGTCGG chr19:1065392-1065472 22 1.29e-03 ACTGCCGAGA CTGTGCTC TGAGCCTCCC chr16:419900-419980 65 1.39e-03 GCCCAGGATC CAGCCCTC GCCGCCCC chr4:951926-952006 59 1.39e-03 GGAGACGCTG CAGCCCTC GGTGTGGTTT chr22:50638819-50638899 55 1.39e-03 GGTGCCCGCC CAGCCCTC CGGGAGGGTC chr19:3536887-3536967 4 1.39e-03 GCT CAGCCCTC GAAGGCCGCA chr1:3697612-3697692 41 1.39e-03 GCCCTGGCGT CAGCGCAC GACAGTCACG chr9:127618721-127618801 24 1.55e-03 AAGCTGCCTG CAGGCCAC CGGCTCCTGG chr16:89789848-89789928 20 1.55e-03 GGCCTTCTTG CTGGACAG TGCGCTGGCA chr1:156612148-156612228 73 1.55e-03 GGGTAGGCTG CTGGACAG chr16:89661891-89661971 49 1.55e-03 CGACGGCGTC CTGCGCTC CCCACGGGGT chr19:17004477-17004557 38 1.66e-03 GGCTGGTCCT CTGGGCAC GAGGACATCA chr11:862613-862693 3 1.66e-03 CG CTGTCCTC TTCCTTCCCG chr22:20097606-20097686 5 1.66e-03 GCCC CTGTGCAC CGTGGACGTG chr17:79501204-79501284 51 1.66e-03 ATCCTCTCCC CTGGGCAC AGCGTGGGAT chr19:7979185-7979265 57 1.73e-03 TGGCTCGGGC CAGCCCAC CAGCCAATGG chr16:774780-774860 16 1.73e-03 GCCTTGGCAG CTGCACAG CACCTGGGGT chrX:1501348-1501428 68 1.73e-03 GGCCAGGCGC CTGCACAG ACTGG chr11:45928637-45928717 34 1.87e-03 CCCAAGTGCC CTGCCCTC TGTGCCCCAG chr19:56156338-56156418 46 1.87e-03 GCTGCCCGCT CTGCCCTC GCCGCTTCCG chr17:76111316-76111396 45 1.87e-03 GCACCCCGCC CTGCCCTC GCCTTGGCAG chr11:862818-862898 73 1.94e-03 GCCCGGGGCC CTGGCCAC chr19:59073780-59073860 52 1.94e-03 GGCTGAAGCG CTGGCCAC ACTCGGGGCA chr16:571561-571641 12 2.20e-03 CCTGGGGGCT CTGACCAC CTATGGGGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:85128459-85128539 5.9e-05 54_[+1]_18 chr11:860829-860909 5.9e-05 39_[+1]_33 chr4:756189-756269 5.9e-05 60_[+1]_12 chr5:674165-674245 5.9e-05 31_[+1]_41 chr8:145538001-145538081 5.9e-05 37_[+1]_35 chr20:61446315-61446395 5.9e-05 40_[+1]_32 chr1:202146806-202146886 5.9e-05 45_[+1]_27 chr9:139570188-139570268 5.9e-05 34_[+1]_38 chr19:54677974-54678054 5.9e-05 33_[+1]_39 chr11:63992308-63992388 5.9e-05 2_[+1]_70 chr19:3537266-3537346 9.9e-05 9_[+1]_63 chr19:8389566-8389646 9.9e-05 31_[+1]_41 chr8:145150759-145150839 9.9e-05 31_[+1]_41 chr9:138397736-138397816 0.00022 63_[+1]_9 chr2:97548097-97548177 0.00022 56_[+1]_16 chr1:3695467-3695547 0.00022 54_[+1]_18 chr14:104004804-10400488 0.00022 15_[+1]_57 chr19:1260358-1260438 0.00022 19_[+1]_53 chr9:140509092-140509172 0.00022 6_[+1]_66 chr16:89223292-89223372 0.00022 1_[+1]_71 chr9:139613915-139613995 0.00022 26_[+1]_46 chr22:19959029-19959109 0.00022 22_[+1]_50 chr19:50004051-50004131 0.00022 10_[+1]_62 chr21:45562949-45563029 0.00022 52_[+1]_20 chr19:5892131-5892211 0.00022 8_[+1]_64 chr16:3024206-3024286 0.00022 6_[+1]_66 chr19:51015640-51015720 0.00022 32_[+1]_40 chr17:76108279-76108359 0.00022 46_[+1]_26 chr9:130690382-130690462 0.00022 26_[+1]_46 chr16:637246-637326 0.00022 14_[+1]_58 chr8:144683636-144683716 0.00022 18_[+1]_54 chr17:76107972-76108052 0.00022 57_[+1]_15 chr19:56000787-56000867 0.00028 61_[+1]_11 chr19:7981064-7981144 0.00028 15_[+1]_57 chr8:145096098-145096178 0.00028 6_[+1]_66 chr16:850842-850922 0.00028 6_[+1]_66 chrX:1538073-1538153 0.00028 52_[+1]_20 chr9:139746738-139746818 0.00035 58_[+1]_14 chr22:20100800-20100880 0.00035 11_[+1]_61 chr8:144681709-144681789 0.00035 15_[+1]_57 chr11:64880642-64880722 0.00035 70_[+1]_2 chr1:1226786-1226866 0.00035 11_[+1]_61 chr5:673866-673946 0.00035 30_[+1]_42 chr1:1292449-1292529 0.00035 63_[+1]_9 chr17:79503584-79503664 0.00035 36_[+1]_36 chr8:142451621-142451701 0.00047 39_[+1]_33 chr1:1471571-1471651 0.00047 33_[+1]_39 chr19:19040325-19040405 0.00047 1_[+1]_71 chr17:4438369-4438449 0.00047 67_[+1]_5 chr7:100168933-100169013 0.00047 5_[+1]_67 chr16:635509-635589 0.00047 38_[+1]_34 chr19:871093-871173 0.00047 66_[+1]_6 chr19:58983348-58983428 0.00047 65_[+1]_7 chr21:46929572-46929652 0.00047 19_[+1]_53 chr21:46927343-46927423 0.00059 62_[+1]_10 chr17:79219792-79219872 0.00059 70_[+1]_2 chr4:1022829-1022909 0.00059 10_[+1]_62 chr17:76168369-76168449 0.00059 64_[+1]_8 chr9:139256972-139257052 0.00059 4_[+1]_68 chr19:54675765-54675845 0.00059 50_[+1]_22 chr11:824512-824592 0.00059 62_[+1]_10 chr11:67805885-67805965 0.00059 63_[+1]_9 chr19:50361541-50361621 0.00059 19_[+1]_53 chr22:41921513-41921593 0.00059 32_[+1]_40 chr1:1227017-1227097 0.00062 66_[+1]_6 chr16:2261066-2261146 0.00062 51_[+1]_21 chr21:45750417-45750497 0.00062 11_[+1]_61 chr11:62455531-62455611 0.00077 71_[+1]_1 chr9:140114922-140115002 0.00077 14_[+1]_58 chr19:41119039-41119119 0.00077 55_[+1]_17 chr8:145095086-145095166 0.00077 46_[+1]_26 chr17:79496132-79496212 0.00077 4_[+1]_68 chr8:144654915-144654995 0.00077 20_[+1]_52 chr9:140508669-140508749 0.00077 49_[+1]_23 chr19:13206372-13206452 0.00077 62_[+1]_10 chr11:71951219-71951299 0.00077 18_[+1]_54 chr2:97542038-97542118 0.00077 59_[+1]_13 chr5:176734889-176734969 0.00077 23_[+1]_49 chr1:3694422-3694502 0.00077 27_[+1]_45 chr16:851244-851324 0.0009 28_[+1]_44 chr16:3021590-3021670 0.0009 46_[+1]_26 chr17:79857806-79857886 0.0009 27_[+1]_45 chr4:757832-757912 0.0009 20_[+1]_52 chr16:766923-767003 0.0009 33_[+1]_39 chr10:135163139-13516321 0.0009 32_[+1]_40 chr11:67206121-67206201 0.0009 27_[+1]_45 chr18:75680811-75680891 0.0009 37_[+1]_35 chr19:866467-866547 0.0009 49_[+1]_23 chr7:44104876-44104956 0.00092 72_[+1] chr16:57507238-57507318 0.00092 39_[+1]_33 chr4:1022614-1022694 0.001 66_[+1]_6 chr17:16347387-16347467 0.001 42_[+1]_30 chr17:72208560-72208640 0.001 43_[+1]_29 chr11:64880440-64880520 0.001 19_[+1]_53 chr16:2200892-2200972 0.001 10_[+1]_62 chr19:866963-867043 0.001 12_[+1]_60 chr17:74268453-74268533 0.0012 12_[+1]_60 chr16:776476-776556 0.0012 16_[+1]_56 chr11:281596-281676 0.0012 1_[+1]_71 chr3:52557479-52557559 0.0012 54_[+1]_18 chr16:850583-850663 0.0012 8_[+1]_64 chr19:18546133-18546213 0.0012 32_[+1]_40 chr11:298550-298630 0.0012 22_[+1]_50 chr8:145536997-145537077 0.0012 16_[+1]_56 chr16:636883-636963 0.0013 40_[+1]_32 chr19:55963576-55963656 0.0013 61_[+1]_11 chr19:1065392-1065472 0.0013 21_[+1]_51 chr16:419900-419980 0.0014 64_[+1]_8 chr4:951926-952006 0.0014 58_[+1]_14 chr22:50638819-50638899 0.0014 54_[+1]_18 chr19:3536887-3536967 0.0014 3_[+1]_69 chr1:3697612-3697692 0.0014 40_[+1]_32 chr9:127618721-127618801 0.0016 23_[+1]_49 chr16:89789848-89789928 0.0016 19_[+1]_53 chr1:156612148-156612228 0.0016 72_[+1] chr16:89661891-89661971 0.0016 48_[+1]_24 chr19:17004477-17004557 0.0017 37_[+1]_35 chr11:862613-862693 0.0017 2_[+1]_70 chr22:20097606-20097686 0.0017 4_[+1]_68 chr17:79501204-79501284 0.0017 50_[+1]_22 chr19:7979185-7979265 0.0017 56_[+1]_16 chr16:774780-774860 0.0017 15_[+1]_57 chrX:1501348-1501428 0.0017 67_[+1]_5 chr11:45928637-45928717 0.0019 33_[+1]_39 chr19:56156338-56156418 0.0019 45_[+1]_27 chr17:76111316-76111396 0.0019 44_[+1]_28 chr11:862818-862898 0.0019 72_[+1] chr19:59073780-59073860 0.0019 51_[+1]_21 chr16:571561-571641 0.0022 11_[+1]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CWGSSCWG width=8 seqs=129 chr16:85128459-85128539 ( 55) CAGGGCTG 1 chr11:860829-860909 ( 40) CAGGGCTG 1 chr4:756189-756269 ( 61) CAGTGCTG 1 chr5:674165-674245 ( 32) CAGGGCTG 1 chr8:145538001-145538081 ( 38) CAGGGCTG 1 chr20:61446315-61446395 ( 41) CAGTGCTG 1 chr1:202146806-202146886 ( 46) CAGTGCTG 1 chr9:139570188-139570268 ( 35) CAGGGCTG 1 chr19:54677974-54678054 ( 34) CAGGGCTG 1 chr11:63992308-63992388 ( 3) CAGTGCTG 1 chr19:3537266-3537346 ( 10) CAGCGCTG 1 chr19:8389566-8389646 ( 32) CAGCGCTG 1 chr8:145150759-145150839 ( 32) CAGCGCTG 1 chr9:138397736-138397816 ( 64) CAGGGCAG 1 chr2:97548097-97548177 ( 57) CAGGGCAG 1 chr1:3695467-3695547 ( 55) CAGGGCAG 1 chr14:104004804-10400488 ( 16) CAGTGCAG 1 chr19:1260358-1260438 ( 20) CAGGCCTG 1 chr9:140509092-140509172 ( 7) CAGGCCTG 1 chr16:89223292-89223372 ( 2) CAGGCCTG 1 chr9:139613915-139613995 ( 27) CAGTGCAG 1 chr22:19959029-19959109 ( 23) CAGGCCTG 1 chr19:50004051-50004131 ( 11) CAGGCCTG 1 chr21:45562949-45563029 ( 53) CAGGGCAG 1 chr19:5892131-5892211 ( 9) CAGGCCTG 1 chr16:3024206-3024286 ( 7) CAGGGCAG 1 chr19:51015640-51015720 ( 33) CAGGGCAG 1 chr17:76108279-76108359 ( 47) CAGGCCTG 1 chr9:130690382-130690462 ( 27) CAGGGCAG 1 chr16:637246-637326 ( 15) CAGGCCTG 1 chr8:144683636-144683716 ( 19) CAGGCCTG 1 chr17:76107972-76108052 ( 58) CAGGCCTG 1 chr19:56000787-56000867 ( 62) CTGGGCTG 1 chr19:7981064-7981144 ( 16) CTGGGCTG 1 chr8:145096098-145096178 ( 7) CTGGGCTG 1 chr16:850842-850922 ( 7) CTGTGCTG 1 chrX:1538073-1538153 ( 53) CTGGGCTG 1 chr9:139746738-139746818 ( 59) CAGCGCAG 1 chr22:20100800-20100880 ( 12) CAGCCCTG 1 chr8:144681709-144681789 ( 16) CAGCCCTG 1 chr11:64880642-64880722 ( 71) CAGCCCTG 1 chr1:1226786-1226866 ( 12) CAGCCCTG 1 chr5:673866-673946 ( 31) CAGCCCTG 1 chr1:1292449-1292529 ( 64) CAGCGCAG 1 chr17:79503584-79503664 ( 37) CAGCGCAG 1 chr8:142451621-142451701 ( 40) CAGTCCAG 1 chr1:1471571-1471651 ( 34) CAGAGCTG 1 chr19:19040325-19040405 ( 2) CTGCGCTG 1 chr17:4438369-4438449 ( 68) CAGAGCTG 1 chr7:100168933-100169013 ( 6) CAGGCCAG 1 chr16:635509-635589 ( 39) CAGAGCTG 1 chr19:871093-871173 ( 67) CAGTCCAG 1 chr19:58983348-58983428 ( 66) CAGGCCAG 1 chr21:46929572-46929652 ( 20) CAGAGCTG 1 chr21:46927343-46927423 ( 63) CTGGGCAG 1 chr17:79219792-79219872 ( 71) CTGTGCAG 1 chr4:1022829-1022909 ( 11) CTGTCCTG 1 chr17:76168369-76168449 ( 65) CTGTGCAG 1 chr9:139256972-139257052 ( 5) CTGTCCTG 1 chr19:54675765-54675845 ( 51) CTGGGCAG 1 chr11:824512-824592 ( 63) CTGTCCTG 1 chr11:67805885-67805965 ( 64) CTGGGCAG 1 chr19:50361541-50361621 ( 20) CTGTGCAG 1 chr22:41921513-41921593 ( 33) CTGGGCAG 1 chr1:1227017-1227097 ( 67) CAGCCCAG 1 chr16:2261066-2261146 ( 52) CAGCCCAG 1 chr21:45750417-45750497 ( 12) CAGCCCAG 1 chr11:62455531-62455611 ( 72) CTGCGCAG 1 chr9:140114922-140115002 ( 15) CAGTACTG 1 chr19:41119039-41119119 ( 56) CTGCGCAG 1 chr8:145095086-145095166 ( 47) CAGAGCAG 1 chr17:79496132-79496212 ( 5) CTGCGCAG 1 chr8:144654915-144654995 ( 21) CAGGACTG 1 chr9:140508669-140508749 ( 50) CTGCGCAG 1 chr19:13206372-13206452 ( 63) CTGCCCTG 1 chr11:71951219-71951299 ( 19) CAGACCTG 1 chr2:97542038-97542118 ( 60) CTGCCCTG 1 chr5:176734889-176734969 ( 24) CTGCGCAG 1 chr1:3694422-3694502 ( 28) CTGCCCTG 1 chr16:851244-851324 ( 29) CTGAGCTG 1 chr16:3021590-3021670 ( 47) CAGTGCTC 1 chr17:79857806-79857886 ( 28) CAGTGCTC 1 chr4:757832-757912 ( 21) CAGGGCTC 1 chr16:766923-767003 ( 34) CTGAGCTG 1 chr10:135163139-13516321 ( 33) CAGGGCTC 1 chr11:67206121-67206201 ( 28) CTGGCCAG 1 chr18:75680811-75680891 ( 38) CTGAGCTG 1 chr19:866467-866547 ( 50) CAGTGCTC 1 chr7:44104876-44104956 ( 73) CAGCACTG 1 chr16:57507238-57507318 ( 40) CAGCACTG 1 chr4:1022614-1022694 ( 67) CAGGACAG 1 chr17:16347387-16347467 ( 43) CAGGACAG 1 chr17:72208560-72208640 ( 44) CTGCCCAG 1 chr11:64880440-64880520 ( 20) CAGGACAG 1 chr16:2200892-2200972 ( 11) CTGCCCAG 1 chr19:866963-867043 ( 13) CAGCGCTC 1 chr17:74268453-74268533 ( 13) CAGGCCTC 1 chr16:776476-776556 ( 17) CAGGGCAC 1 chr11:281596-281676 ( 2) CTGTACTG 1 chr3:52557479-52557559 ( 55) CAGGCCTC 1 chr16:850583-850663 ( 9) CTGACCTG 1 chr19:18546133-18546213 ( 33) CTGAGCAG 1 chr11:298550-298630 ( 23) CAGGGCAC 1 chr8:145536997-145537077 ( 17) CAGGGCAC 1 chr16:636883-636963 ( 41) CTGGGCTC 1 chr19:55963576-55963656 ( 62) CTGGGCTC 1 chr19:1065392-1065472 ( 22) CTGTGCTC 1 chr16:419900-419980 ( 65) CAGCCCTC 1 chr4:951926-952006 ( 59) CAGCCCTC 1 chr22:50638819-50638899 ( 55) CAGCCCTC 1 chr19:3536887-3536967 ( 4) CAGCCCTC 1 chr1:3697612-3697692 ( 41) CAGCGCAC 1 chr9:127618721-127618801 ( 24) CAGGCCAC 1 chr16:89789848-89789928 ( 20) CTGGACAG 1 chr1:156612148-156612228 ( 73) CTGGACAG 1 chr16:89661891-89661971 ( 49) CTGCGCTC 1 chr19:17004477-17004557 ( 38) CTGGGCAC 1 chr11:862613-862693 ( 3) CTGTCCTC 1 chr22:20097606-20097686 ( 5) CTGTGCAC 1 chr17:79501204-79501284 ( 51) CTGGGCAC 1 chr19:7979185-7979265 ( 57) CAGCCCAC 1 chr16:774780-774860 ( 16) CTGCACAG 1 chrX:1501348-1501428 ( 68) CTGCACAG 1 chr11:45928637-45928717 ( 34) CTGCCCTC 1 chr19:56156338-56156418 ( 46) CTGCCCTC 1 chr17:76111316-76111396 ( 45) CTGCCCTC 1 chr11:862818-862898 ( 73) CTGGCCAC 1 chr19:59073780-59073860 ( 52) CTGGCCAC 1 chr16:571561-571641 ( 12) CTGACCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.88203 E= 6.5e-017 -1366 158 -1366 -1366 192 -1366 -1366 134 -1366 -1366 152 -1366 -78 -11 27 19 -78 15 62 -1366 -1366 158 -1366 -1366 142 -1366 -1366 188 -1366 -44 111 -1366 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 129 E= 6.5e-017 0.000000 1.000000 0.000000 0.000000 0.604651 0.000000 0.000000 0.395349 0.000000 0.000000 1.000000 0.000000 0.093023 0.310078 0.418605 0.178295 0.093023 0.372093 0.534884 0.000000 0.000000 1.000000 0.000000 0.000000 0.426357 0.000000 0.000000 0.573643 0.000000 0.248062 0.751938 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSSCWG MEME-1 regular expression -------------------------------------------------------------------------------- C[AT]G[GC][GC]C[TA][GC] -------------------------------------------------------------------------------- Time 4.87 secs. ******************************************************************************** ******************************************************************************** MOTIF ATATATTT MEME-2 width = 8 sites = 4 llr = 55 E-value = 5.1e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A a:8:8::: pos.-specific C :::::::: probability G :::::::: matrix T :a3a3aaa bits 2.7 ** * *** 2.4 ** * *** 2.1 ** * *** 1.9 ******** Relative 1.6 ******** Entropy 1.3 ******** (19.7 bits) 1.1 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel ATATATTT consensus T T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr19:29106911-29106991 51 3.78e-07 gcataatggt atatattt gtctttatac chr16:419900-419980 46 3.78e-07 CGTTGTTGGC ATATATTT GGCCCAGGAT chr8:128754677-128754757 57 1.12e-06 TTTTTTTGTG ATTTATTT TGTTTTTATT chr6:68588813-68588893 40 1.12e-06 taatttgcta atattttt aaagactttt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:29106911-29106991 3.8e-07 50_[+2]_22 chr16:419900-419980 3.8e-07 45_[+2]_27 chr8:128754677-128754757 1.1e-06 56_[+2]_16 chr6:68588813-68588893 1.1e-06 39_[+2]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATATATTT width=8 seqs=4 chr19:29106911-29106991 ( 51) ATATATTT 1 chr16:419900-419980 ( 46) ATATATTT 1 chr8:128754677-128754757 ( 57) ATTTATTT 1 chr6:68588813-68588893 ( 40) ATATTTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.8924 E= 5.1e+000 264 -865 -865 -865 -865 -865 -865 267 223 -865 -865 68 -865 -865 -865 267 223 -865 -865 68 -865 -865 -865 267 -865 -865 -865 267 -865 -865 -865 267 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 4 E= 5.1e+000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.750000 0.000000 0.000000 0.250000 0.000000 0.000000 0.000000 1.000000 0.750000 0.000000 0.000000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATATTT MEME-2 regular expression -------------------------------------------------------------------------------- AT[AT]T[AT]TTT -------------------------------------------------------------------------------- Time 8.26 secs. ******************************************************************************** ******************************************************************************** MOTIF CWGSNCCW MEME-3 width = 8 sites = 147 llr = 850 E-value = 5.6e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 Description -------------------------------------------------------------------------------- Simplified A :6::21:5 pos.-specific C a::545a: probability G ::8522:: matrix T :42:22:5 bits 2.7 2.4 2.1 1.9 Relative 1.6 ** ** Entropy 1.3 ** ** (8.3 bits) 1.1 *** ** 0.8 *** ** 0.5 **** ** 0.3 **** *** 0.0 -------- Multilevel CAGGCCCT consensus T CTG A sequence A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr11:45928637-45928717 5 7.05e-05 GGGG CAGCACCT CCACCATCCG chr9:139256972-139257052 15 7.05e-05 CTGTCCTGCC CAGGACCT CCCGGCCAGG chr17:79889169-79889249 59 7.05e-05 TGCTCTGCGT CAGCACCT GAGAATGGGC chr22:19959029-19959109 66 7.05e-05 CAGCAGGCAG CAGGTCCT GCCATCG chr16:571561-571641 64 7.05e-05 ACTCCGACAT CAGGACCT GAGATGACC chr19:5892131-5892211 65 7.05e-05 GCGGCGAGCA CAGCTCCT GGTCTGAG chr16:89661891-89661971 22 7.05e-05 CACCGACATG CAGGTCCT GGACGGCGAC chr19:58982456-58982536 34 7.05e-05 TGGGAGCGCC CAGGACCT GGAGGCTGCC chr19:46285492-46285572 11 7.05e-05 CGGAGGCGCC CAGCTCCT GGTGGACGCC chr19:4445297-4445377 53 2.86e-04 CCCAATTCCA CAGCTCCA CGGCTGGCGC chr19:3537266-3537346 37 2.86e-04 CCTCTGCTGT CAGCTCCA CCCGACAGGC chr3:38048063-38048143 29 2.86e-04 GCTCCGTCAG CAGCACCA GCGCCACGAT chr21:46926221-46926301 1 2.86e-04 . CAGGCCCT CCAGGGCCAC chr11:62455531-62455611 21 2.86e-04 CCCCTGGCTT CAGCCCCT TCAGTTCGGC chr22:41923166-41923246 1 2.86e-04 . CAGCCCCT TTACCGGGAG chr5:180661477-180661557 29 2.86e-04 CCTGCCCCAG CAGCCCCT GCTCCAGCGG chr17:16347387-16347467 10 2.86e-04 GATTCCCGA CAGGTCCA CTGTGTTGTC chr8:145095086-145095166 27 2.86e-04 AGCCTCGTGG CAGGCCCT GTGGCCATGT chr17:40932969-40933049 16 2.86e-04 CCGGACTCCG CTGGTCCT GGCCCCGCGA chr1:1227017-1227097 7 2.86e-04 CTTGGC CTGGTCCT TGCAGCTGTG chr16:766923-767003 17 2.86e-04 CAGGTGCCTG CAGGCCCT GCAGCGACGC chr11:64880642-64880722 55 2.86e-04 TTCAGGCTTC CAGGCCCT GGTGCTGACA chr7:100168933-100169013 52 2.86e-04 CGATCTGGAC CTGGTCCT TTCTCTGGGG chr19:50361541-50361621 57 2.86e-04 CAGCCACGAC CTGCACCT GGGGGGCTGC chr19:17004477-17004557 30 2.86e-04 TGGGAGTGGG CTGGTCCT CTGGGCACGA chr11:840383-840463 28 2.86e-04 GCTTCTCGAT CAGGTCCA CGTGGGCCAG chr3:195771505-195771585 21 2.86e-04 CGGGTGGAGG CTGCTCCT GTGGAGGGTC chr9:140508669-140508749 67 2.86e-04 GGCTCACAGG CTGGTCCT TCCCCA chr20:62329692-62329772 21 2.86e-04 GCGGCTGCTG CAGGCCCT CGAGGCCCCG chr21:46929572-46929652 11 2.86e-04 GAAGAGGGCC CAGCCCCT GCAGAGCTGC chr8:144684701-144684781 8 2.86e-04 CGCCTGC CAGGCCCT GGCTGTGGTG chr9:139693980-139694060 49 2.86e-04 CCGCGGCTCT CTGCTCCT CGTGGAAGCA chr16:731195-731275 29 2.86e-04 GCAGCACGAG CAGGCCCT GGCCGACTGC chr16:1830100-1830180 1 2.86e-04 . CAGCACCA GGTCACACAA chr5:176734889-176734969 56 2.86e-04 GTCGGGCCCG CTGCTCCT GATCCTCCAG chr19:8389566-8389646 70 5.06e-04 GCATTCACAT CAGCCCCA CAC chr9:140139524-140139604 2 5.06e-04 C CAGGCCCA CACCCACCTG chr4:1022829-1022909 56 5.06e-04 ATGGGGGCTC CAGGCCCA GGAAGAGACC chr19:7979185-7979265 3 5.06e-04 CT CTGGACCA GGCAGAGGGC chr19:49116530-49116610 7 5.06e-04 CAGCCG CTGGCCCT CGGAATATAG chr16:850842-850922 71 5.06e-04 CAGTGTGGGG CTGGTCCA TT chr11:298550-298630 41 5.06e-04 CAGTCACCAC CAGCCCCA GGAGCAGCAG chr16:2053048-2053128 1 5.06e-04 . CTGCTCCA GGTCCCCGAA chr11:64981556-64981636 10 5.06e-04 ACCATACCC CTGGACCA GCTTGGGGCC chr4:951926-952006 38 5.06e-04 CACGGCGCTG CTGCACCA GGCGGAGACG chr10:135163139-13516321 67 5.06e-04 TGGGCCCTCG CTGCTCCA TACCCA chrX:49028442-49028522 48 5.06e-04 GATGGGGTGG CTGGACCA TGCGGAACTG chr5:673866-673946 49 5.06e-04 CCTCTGGGAA CAGGCCCA GACCAGCTGG chr19:13206372-13206452 47 5.06e-04 GTTCCTGCCC CTGCCCCT CATGCAGACT chr9:130690382-130690462 54 5.06e-04 CCTCCTCCGC CAGGCCCA GGGAGCGGCG chr16:637246-637326 69 5.06e-04 GTGCACGCAG CTGCCCCT CGGT chr3:183978877-183978957 47 6.14e-04 CTCGGCCGAT CTGGCCCA GCTTGGGGGG chr1:3695698-3695778 51 6.14e-04 TCAAGGCAGC CTGGCCCA TGTCCTGCAA chr17:42393954-42394034 36 7.14e-04 GCCGCAGACA CAGCTTCA TGAGCACGGA chr9:131768794-131768874 1 7.14e-04 . CAGCCTCT CGCGCTACTT chr5:674165-674245 52 7.14e-04 GGCCCCTGGA CAGGCTCT TCCTACCTCC chr1:1226786-1226866 33 7.14e-04 CAGGGGCGTC CAGCATCA AGCCAGAGGC chr11:65637601-65637681 58 7.14e-04 AGGAGCCAGG CAGGTTCA CGCAGCGGTG chr1:3694422-3694502 47 7.14e-04 ATCTGTCTGG CTGCATCT GGGTCCGCCC chr8:144681709-144681789 31 7.92e-04 CTGCCCCCTG CAGCGCCT CCGGCCCCAG chr11:67805885-67805965 41 7.92e-04 GGGTATCTCC CAGGGCCT GCTGGGTGCG chr16:3024206-3024286 64 7.92e-04 ACCCTCGGCT CAGGGCCT CCGCTGCCA chr9:139570188-139570268 73 7.92e-04 TCACCCAGCC CAGCGCCT chr11:65363187-65363267 37 7.92e-04 GTATCGGGAC CAGGGCCT TAGACCCCCC chr9:140068805-140068885 17 9.99e-04 GGTCATTCGC CAGCCTCA GCAATTCCAA chr21:46927343-46927423 36 9.99e-04 CTGGGAGGGC CAGGTGCT GGGGCGGGAG chr16:89783881-89783961 38 9.99e-04 GCCGTGGGAG CTGCCTCT CTGTGACTCG chr21:45562949-45563029 15 9.99e-04 TCTGGCAGCG CAGGCTCA CAGGGGGCAG chr18:75680811-75680891 6 9.99e-04 GGCCT CTGCATCA GAAGAACACA chr19:866467-866547 59 9.99e-04 CCAGTGCTCC CATCTCCT CCCCGTCCAC chr17:4436552-4436632 1 9.99e-04 . CATCACCT GCTTTACGGG chr2:97542038-97542118 47 9.99e-04 GGCCTGGGCC CAGGTGCT GCCCACTGCC chr16:1829833-1829913 27 9.99e-04 ATGTGACCTG CAGGAGCT GGAGGCGGGC chr19:50004051-50004131 60 1.19e-03 GGTTGGGAGA CAGGGCCA TGGGGAGAGG chr22:50638819-50638899 72 1.19e-03 CCGGGAGGGT CTGCGCCT G chr19:58983348-58983428 47 1.19e-03 TCCGGCGATC CAGGGCCA GCCTGCACCC chr17:4437500-4437580 68 1.19e-03 GCTGTCTTCA CAGGGCCA ACAAT chr19:51296927-51297007 40 1.19e-03 CACTACCAGC CTGGGCCT CCCCAGATGT chr19:3536887-3536967 68 1.19e-03 CACAATCCTG CAGGGCCA AGGAC chr22:19960981-19961061 37 1.54e-03 GCCGGGGGGA CTGGAGCT ACCTCCAGTT chr3:49756641-49756721 30 1.54e-03 AGCCGGGGCG CAGGCGCT GGAGCGCGTT chr7:100276147-100276227 24 1.54e-03 CAGCGGACGG CTGCTGCT CGCTGGCTAC chr17:1613961-1614041 39 1.54e-03 TGCTGAGCGT CATCACCA CCCACCGCCA chr19:41119039-41119119 8 1.54e-03 CCTTCCG CTGCAGCT GCGCGCCAGG chr19:7978135-7978215 9 1.54e-03 GGCTGGGG CTGCTGCT CTGGGGTCTC chr17:4438369-4438449 32 1.54e-03 GGCGAGGCAG CTGGAGCT CGGGGAACAG chr16:89789848-89789928 1 1.54e-03 . CAGCTGCA AGGCCTTCTT chr17:76111316-76111396 67 1.54e-03 TGGCAGACGC CAGCCGCT GATCCC chrX:1501348-1501428 37 1.54e-03 TTGTGGGGGT CTGCCTCA ATCTCCCTGG chr17:4439386-4439466 32 1.54e-03 CCTTGCAGAG CTTCACCT CCCACCTGCT chr11:67206121-67206201 56 1.54e-03 GGGGTGGCAT CAGCAGCA GTGGTGGTGG chr11:63992308-63992388 19 1.54e-03 TGGGATCCCC CAGCTGCA GGGCGAACCG chr1:1471571-1471651 70 1.72e-03 GGCCCCAGAC CAGCCACT CCC chr8:142443572-142443652 16 1.72e-03 CGTCAGCCCC CAGCCACT GTGGCGCGCC chr7:100276347-100276427 68 1.72e-03 TCCTCAAGAT CTGGAACT AATGG chr8:145538001-145538081 7 1.72e-03 GAGGAG CTGGGCCA GCCGCCCACC chr16:635509-635589 68 1.72e-03 ACCGTCACCC CAGCCACT CGCAG chr11:63990581-63990661 38 1.72e-03 CCTGGCGTTT CAGCAACA TGCGCCAGTG chr9:139735330-139735410 25 2.09e-03 CCGGCACCTG CTTGCCCT CCGCGCTCAT chr17:74076256-74076336 14 2.09e-03 GTTGGGATGC CAGGGTCT CCCCCCGGCC chr17:74268453-74268533 55 2.09e-03 AGGTGTGGGC CATGCCCA GGTGCGGGAA chr4:756189-756269 47 2.09e-03 ttggaaattc catcccca gcagggcagt chr11:281596-281676 68 2.09e-03 GTTCCCGGAG CTGGCGCT GCAGC chr16:780442-780522 5 2.09e-03 TGGC CTTCTCCA CGGCGTGGTA chr21:45560693-45560773 58 2.09e-03 GTGTGCTCTT CAGCGTCT GCTGCCGGGA chr19:54675765-54675845 22 2.09e-03 GGCAGCACCC CAGGGTCT CGGTACCGAA chr19:50360458-50360538 32 2.09e-03 GATGCGATGG CTGGAGCA AGGAGCTGCA chr20:62331817-62331897 29 2.09e-03 GCACGACACA CTTCACCA TCCACTCGAT chr8:144897435-144897515 51 2.09e-03 AACAGTGCCG CTTGTCCA CCGACTCCAC chr21:44474027-44474107 35 2.09e-03 CGAACACCAT CTGCCGCT GACTGGACTT chr6:16760865-16760945 2 2.09e-03 G CAGCCGCA CACCCGGCGA chr8:145536997-145537077 3 2.09e-03 CC CAGCCGCA CCCCTGCAGG chr22:20097606-20097686 59 2.09e-03 CGGGGGCCGC CAGCCGCA CTTCTGAGGA chr17:76107972-76108052 24 2.09e-03 CCCCACAGAC CTGGAGCA CTGGGGTCAT chr16:1828424-1828504 65 2.21e-03 CGAGTGCAGG CTGCTACA GAAGGAGG chr17:79496132-79496212 49 2.21e-03 AGCCCCGTGC CTGCTACA CGCTGGAGTT chr7:44104876-44104956 16 2.21e-03 GCACCACAGG CAGCCACA TCTGGTCCGT chr3:129032357-129032437 64 2.21e-03 AGACCCCAAA CAGCCACA GCCATGTGT chr19:54677974-54678054 64 2.21e-03 CCTCGGCAGC CAGGCACA GCGGGATGG chr11:860829-860909 55 2.39e-03 CTGCGCGGCC CTTCCCCA GAACCAGTCA chr19:50358308-50358388 2 2.39e-03 T CTGCCGCA TCATGGGCAA chr19:58908032-58908112 9 2.39e-03 AGCCCGGC CTGGGTCT TCAACGCTGC chr16:2030881-2030961 46 2.39e-03 CAGGGTGGCC CAGGGTCA CTCACCTTGA chr20:62487148-62487228 28 2.39e-03 GGAGGGAGGG CTGGGTCT CCAGTCCTTC chr16:851709-851789 30 2.39e-03 GTCACTCTGC CTTCCCCA GTGTCACAGG chr11:67401750-67401830 32 2.39e-03 CCAGGTGTGG CTGGGTCT GCCTTGCCCG chr17:4437986-4438066 45 2.39e-03 GTGGGGAGGC CTGGCGCA GTTCAGAGCC chr9:138397736-138397816 6 2.47e-03 TGCAC CTGGCACA GGCCGGCGAG chr3:52557479-52557559 68 2.47e-03 GCCTCAGCCT CATCATCA GTGAC chr11:862613-862693 44 2.47e-03 CCAACTTGCT CATCATCA CCGGCGCCTT chr17:79501204-79501284 40 2.47e-03 CACAGCCTGG CATCCTCT CCCCTGGGCA chr2:97543684-97543764 21 2.62e-03 TGGTGCGGTG CATGGCCT GGGGGCTCTC chr17:79857806-79857886 57 2.74e-03 ACATGCATTG CATCCTCA AGTGGCTGCA chr22:20100800-20100880 48 2.74e-03 AGCTTGCTCA CTTGCTCT ACCTGTCGGG chr2:97548097-97548177 34 2.98e-03 TCCAACGTGG CAGGGGCA GGCACGGGAG chr19:18546133-18546213 62 2.98e-03 GGTGGAAGGT CTGCGGCT CGGGGTCCAT chr16:2200892-2200972 28 2.98e-03 GGGCCTCAGA CTGCGGCT GAAGCCCCCC chr19:14272206-14272286 62 2.98e-03 GTGCTGGGGA CTGGGGCT GTGGCTGGAG chr11:64010785-64010865 37 2.98e-03 TGGGGGCGTG CATGGCCA CCGCCCAGGA chr16:57507238-57507318 66 2.98e-03 GGGATGGGGT CTTGGCCT CACTGCT chr9:127618721-127618801 38 3.17e-03 CCACCGGCTC CTGGGACT CCACCGTACA chr19:2230983-2231063 53 3.17e-03 TGGCGGGTGC CTGGGACT GGGTGTGGAA chr19:56000787-56000867 1 3.34e-03 . CTGGGGCA CCGTGTGTGA chr1:156612148-156612228 25 3.34e-03 CCTCGAGGCT CTGGGGCA CCCAACTCGT chr19:58982846-58982926 33 3.49e-03 CCGAGAAGTC CTTCCGCT GCTCCGAGTG chr16:88874575-88874655 12 3.49e-03 GCCTCCACCG CATCCGCA CCGACACCTA chr9:140509092-140509172 49 3.61e-03 CTGGTGGTGC CTTCCGCA CCACCCCAGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:45928637-45928717 7e-05 4_[+3]_68 chr9:139256972-139257052 7e-05 14_[+3]_58 chr17:79889169-79889249 7e-05 58_[+3]_14 chr22:19959029-19959109 7e-05 65_[+3]_7 chr16:571561-571641 7e-05 63_[+3]_9 chr19:5892131-5892211 7e-05 64_[+3]_8 chr16:89661891-89661971 7e-05 21_[+3]_51 chr19:58982456-58982536 7e-05 33_[+3]_39 chr19:46285492-46285572 7e-05 10_[+3]_62 chr19:4445297-4445377 0.00029 52_[+3]_20 chr19:3537266-3537346 0.00029 36_[+3]_36 chr3:38048063-38048143 0.00029 28_[+3]_44 chr21:46926221-46926301 0.00029 [+3]_72 chr11:62455531-62455611 0.00029 20_[+3]_52 chr22:41923166-41923246 0.00029 [+3]_72 chr5:180661477-180661557 0.00029 28_[+3]_44 chr17:16347387-16347467 0.00029 9_[+3]_63 chr8:145095086-145095166 0.00029 26_[+3]_46 chr17:40932969-40933049 0.00029 15_[+3]_57 chr1:1227017-1227097 0.00029 6_[+3]_66 chr16:766923-767003 0.00029 16_[+3]_56 chr11:64880642-64880722 0.00029 54_[+3]_18 chr7:100168933-100169013 0.00029 51_[+3]_21 chr19:50361541-50361621 0.00029 56_[+3]_16 chr19:17004477-17004557 0.00029 29_[+3]_43 chr11:840383-840463 0.00029 27_[+3]_45 chr3:195771505-195771585 0.00029 20_[+3]_52 chr9:140508669-140508749 0.00029 66_[+3]_6 chr20:62329692-62329772 0.00029 20_[+3]_52 chr21:46929572-46929652 0.00029 10_[+3]_62 chr8:144684701-144684781 0.00029 7_[+3]_65 chr9:139693980-139694060 0.00029 48_[+3]_24 chr16:731195-731275 0.00029 28_[+3]_44 chr16:1830100-1830180 0.00029 [+3]_72 chr5:176734889-176734969 0.00029 55_[+3]_17 chr19:8389566-8389646 0.00051 69_[+3]_3 chr9:140139524-140139604 0.00051 1_[+3]_71 chr4:1022829-1022909 0.00051 55_[+3]_17 chr19:7979185-7979265 0.00051 2_[+3]_70 chr19:49116530-49116610 0.00051 6_[+3]_66 chr16:850842-850922 0.00051 70_[+3]_2 chr11:298550-298630 0.00051 40_[+3]_32 chr16:2053048-2053128 0.00051 [+3]_72 chr11:64981556-64981636 0.00051 9_[+3]_63 chr4:951926-952006 0.00051 37_[+3]_35 chr10:135163139-13516321 0.00051 66_[+3]_6 chrX:49028442-49028522 0.00051 47_[+3]_25 chr5:673866-673946 0.00051 48_[+3]_24 chr19:13206372-13206452 0.00051 46_[+3]_26 chr9:130690382-130690462 0.00051 53_[+3]_19 chr16:637246-637326 0.00051 68_[+3]_4 chr3:183978877-183978957 0.00061 46_[+3]_26 chr1:3695698-3695778 0.00061 50_[+3]_22 chr17:42393954-42394034 0.00071 35_[+3]_37 chr9:131768794-131768874 0.00071 [+3]_72 chr5:674165-674245 0.00071 51_[+3]_21 chr1:1226786-1226866 0.00071 32_[+3]_40 chr11:65637601-65637681 0.00071 57_[+3]_15 chr1:3694422-3694502 0.00071 46_[+3]_26 chr8:144681709-144681789 0.00079 30_[+3]_42 chr11:67805885-67805965 0.00079 40_[+3]_32 chr16:3024206-3024286 0.00079 63_[+3]_9 chr9:139570188-139570268 0.00079 72_[+3] chr11:65363187-65363267 0.00079 36_[+3]_36 chr9:140068805-140068885 0.001 16_[+3]_56 chr21:46927343-46927423 0.001 35_[+3]_37 chr16:89783881-89783961 0.001 37_[+3]_35 chr21:45562949-45563029 0.001 14_[+3]_58 chr18:75680811-75680891 0.001 5_[+3]_67 chr19:866467-866547 0.001 58_[+3]_14 chr17:4436552-4436632 0.001 [+3]_72 chr2:97542038-97542118 0.001 46_[+3]_26 chr16:1829833-1829913 0.001 26_[+3]_46 chr19:50004051-50004131 0.0012 59_[+3]_13 chr22:50638819-50638899 0.0012 71_[+3]_1 chr19:58983348-58983428 0.0012 46_[+3]_26 chr17:4437500-4437580 0.0012 67_[+3]_5 chr19:51296927-51297007 0.0012 39_[+3]_33 chr19:3536887-3536967 0.0012 67_[+3]_5 chr22:19960981-19961061 0.0015 36_[+3]_36 chr3:49756641-49756721 0.0015 29_[+3]_43 chr7:100276147-100276227 0.0015 23_[+3]_49 chr17:1613961-1614041 0.0015 38_[+3]_34 chr19:41119039-41119119 0.0015 7_[+3]_65 chr19:7978135-7978215 0.0015 8_[+3]_64 chr17:4438369-4438449 0.0015 31_[+3]_41 chr16:89789848-89789928 0.0015 [+3]_72 chr17:76111316-76111396 0.0015 66_[+3]_6 chrX:1501348-1501428 0.0015 36_[+3]_36 chr17:4439386-4439466 0.0015 31_[+3]_41 chr11:67206121-67206201 0.0015 55_[+3]_17 chr11:63992308-63992388 0.0015 18_[+3]_54 chr1:1471571-1471651 0.0017 69_[+3]_3 chr8:142443572-142443652 0.0017 15_[+3]_57 chr7:100276347-100276427 0.0017 67_[+3]_5 chr8:145538001-145538081 0.0017 6_[+3]_66 chr16:635509-635589 0.0017 67_[+3]_5 chr11:63990581-63990661 0.0017 37_[+3]_35 chr9:139735330-139735410 0.0021 24_[+3]_48 chr17:74076256-74076336 0.0021 13_[+3]_59 chr17:74268453-74268533 0.0021 54_[+3]_18 chr4:756189-756269 0.0021 46_[+3]_26 chr11:281596-281676 0.0021 67_[+3]_5 chr16:780442-780522 0.0021 4_[+3]_68 chr21:45560693-45560773 0.0021 57_[+3]_15 chr19:54675765-54675845 0.0021 21_[+3]_51 chr19:50360458-50360538 0.0021 31_[+3]_41 chr20:62331817-62331897 0.0021 28_[+3]_44 chr8:144897435-144897515 0.0021 50_[+3]_22 chr21:44474027-44474107 0.0021 34_[+3]_38 chr6:16760865-16760945 0.0021 1_[+3]_71 chr8:145536997-145537077 0.0021 2_[+3]_70 chr22:20097606-20097686 0.0021 58_[+3]_14 chr17:76107972-76108052 0.0021 23_[+3]_49 chr16:1828424-1828504 0.0022 64_[+3]_8 chr17:79496132-79496212 0.0022 48_[+3]_24 chr7:44104876-44104956 0.0022 15_[+3]_57 chr3:129032357-129032437 0.0022 63_[+3]_9 chr19:54677974-54678054 0.0022 63_[+3]_9 chr11:860829-860909 0.0024 54_[+3]_18 chr19:50358308-50358388 0.0024 1_[+3]_71 chr19:58908032-58908112 0.0024 8_[+3]_64 chr16:2030881-2030961 0.0024 45_[+3]_27 chr20:62487148-62487228 0.0024 27_[+3]_45 chr16:851709-851789 0.0024 29_[+3]_43 chr11:67401750-67401830 0.0024 31_[+3]_41 chr17:4437986-4438066 0.0024 44_[+3]_28 chr9:138397736-138397816 0.0025 5_[+3]_67 chr3:52557479-52557559 0.0025 67_[+3]_5 chr11:862613-862693 0.0025 43_[+3]_29 chr17:79501204-79501284 0.0025 39_[+3]_33 chr2:97543684-97543764 0.0026 20_[+3]_52 chr17:79857806-79857886 0.0027 56_[+3]_16 chr22:20100800-20100880 0.0027 47_[+3]_25 chr2:97548097-97548177 0.003 33_[+3]_39 chr19:18546133-18546213 0.003 61_[+3]_11 chr16:2200892-2200972 0.003 27_[+3]_45 chr19:14272206-14272286 0.003 61_[+3]_11 chr11:64010785-64010865 0.003 36_[+3]_36 chr16:57507238-57507318 0.003 65_[+3]_7 chr9:127618721-127618801 0.0032 37_[+3]_35 chr19:2230983-2231063 0.0032 52_[+3]_20 chr19:56000787-56000867 0.0033 [+3]_72 chr1:156612148-156612228 0.0033 24_[+3]_48 chr19:58982846-58982926 0.0035 32_[+3]_40 chr16:88874575-88874655 0.0035 11_[+3]_61 chr9:140509092-140509172 0.0036 48_[+3]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CWGSNCCW width=8 seqs=147 chr11:45928637-45928717 ( 5) CAGCACCT 1 chr9:139256972-139257052 ( 15) CAGGACCT 1 chr17:79889169-79889249 ( 59) CAGCACCT 1 chr22:19959029-19959109 ( 66) CAGGTCCT 1 chr16:571561-571641 ( 64) CAGGACCT 1 chr19:5892131-5892211 ( 65) CAGCTCCT 1 chr16:89661891-89661971 ( 22) CAGGTCCT 1 chr19:58982456-58982536 ( 34) CAGGACCT 1 chr19:46285492-46285572 ( 11) CAGCTCCT 1 chr19:4445297-4445377 ( 53) CAGCTCCA 1 chr19:3537266-3537346 ( 37) CAGCTCCA 1 chr3:38048063-38048143 ( 29) CAGCACCA 1 chr21:46926221-46926301 ( 1) CAGGCCCT 1 chr11:62455531-62455611 ( 21) CAGCCCCT 1 chr22:41923166-41923246 ( 1) CAGCCCCT 1 chr5:180661477-180661557 ( 29) CAGCCCCT 1 chr17:16347387-16347467 ( 10) CAGGTCCA 1 chr8:145095086-145095166 ( 27) CAGGCCCT 1 chr17:40932969-40933049 ( 16) CTGGTCCT 1 chr1:1227017-1227097 ( 7) CTGGTCCT 1 chr16:766923-767003 ( 17) CAGGCCCT 1 chr11:64880642-64880722 ( 55) CAGGCCCT 1 chr7:100168933-100169013 ( 52) CTGGTCCT 1 chr19:50361541-50361621 ( 57) CTGCACCT 1 chr19:17004477-17004557 ( 30) CTGGTCCT 1 chr11:840383-840463 ( 28) CAGGTCCA 1 chr3:195771505-195771585 ( 21) CTGCTCCT 1 chr9:140508669-140508749 ( 67) CTGGTCCT 1 chr20:62329692-62329772 ( 21) CAGGCCCT 1 chr21:46929572-46929652 ( 11) CAGCCCCT 1 chr8:144684701-144684781 ( 8) CAGGCCCT 1 chr9:139693980-139694060 ( 49) CTGCTCCT 1 chr16:731195-731275 ( 29) CAGGCCCT 1 chr16:1830100-1830180 ( 1) CAGCACCA 1 chr5:176734889-176734969 ( 56) CTGCTCCT 1 chr19:8389566-8389646 ( 70) CAGCCCCA 1 chr9:140139524-140139604 ( 2) CAGGCCCA 1 chr4:1022829-1022909 ( 56) CAGGCCCA 1 chr19:7979185-7979265 ( 3) CTGGACCA 1 chr19:49116530-49116610 ( 7) CTGGCCCT 1 chr16:850842-850922 ( 71) CTGGTCCA 1 chr11:298550-298630 ( 41) CAGCCCCA 1 chr16:2053048-2053128 ( 1) CTGCTCCA 1 chr11:64981556-64981636 ( 10) CTGGACCA 1 chr4:951926-952006 ( 38) CTGCACCA 1 chr10:135163139-13516321 ( 67) CTGCTCCA 1 chrX:49028442-49028522 ( 48) CTGGACCA 1 chr5:673866-673946 ( 49) CAGGCCCA 1 chr19:13206372-13206452 ( 47) CTGCCCCT 1 chr9:130690382-130690462 ( 54) CAGGCCCA 1 chr16:637246-637326 ( 69) CTGCCCCT 1 chr3:183978877-183978957 ( 47) CTGGCCCA 1 chr1:3695698-3695778 ( 51) CTGGCCCA 1 chr17:42393954-42394034 ( 36) CAGCTTCA 1 chr9:131768794-131768874 ( 1) CAGCCTCT 1 chr5:674165-674245 ( 52) CAGGCTCT 1 chr1:1226786-1226866 ( 33) CAGCATCA 1 chr11:65637601-65637681 ( 58) CAGGTTCA 1 chr1:3694422-3694502 ( 47) CTGCATCT 1 chr8:144681709-144681789 ( 31) CAGCGCCT 1 chr11:67805885-67805965 ( 41) CAGGGCCT 1 chr16:3024206-3024286 ( 64) CAGGGCCT 1 chr9:139570188-139570268 ( 73) CAGCGCCT 1 chr11:65363187-65363267 ( 37) CAGGGCCT 1 chr9:140068805-140068885 ( 17) CAGCCTCA 1 chr21:46927343-46927423 ( 36) CAGGTGCT 1 chr16:89783881-89783961 ( 38) CTGCCTCT 1 chr21:45562949-45563029 ( 15) CAGGCTCA 1 chr18:75680811-75680891 ( 6) CTGCATCA 1 chr19:866467-866547 ( 59) CATCTCCT 1 chr17:4436552-4436632 ( 1) CATCACCT 1 chr2:97542038-97542118 ( 47) CAGGTGCT 1 chr16:1829833-1829913 ( 27) CAGGAGCT 1 chr19:50004051-50004131 ( 60) CAGGGCCA 1 chr22:50638819-50638899 ( 72) CTGCGCCT 1 chr19:58983348-58983428 ( 47) CAGGGCCA 1 chr17:4437500-4437580 ( 68) CAGGGCCA 1 chr19:51296927-51297007 ( 40) CTGGGCCT 1 chr19:3536887-3536967 ( 68) CAGGGCCA 1 chr22:19960981-19961061 ( 37) CTGGAGCT 1 chr3:49756641-49756721 ( 30) CAGGCGCT 1 chr7:100276147-100276227 ( 24) CTGCTGCT 1 chr17:1613961-1614041 ( 39) CATCACCA 1 chr19:41119039-41119119 ( 8) CTGCAGCT 1 chr19:7978135-7978215 ( 9) CTGCTGCT 1 chr17:4438369-4438449 ( 32) CTGGAGCT 1 chr16:89789848-89789928 ( 1) CAGCTGCA 1 chr17:76111316-76111396 ( 67) CAGCCGCT 1 chrX:1501348-1501428 ( 37) CTGCCTCA 1 chr17:4439386-4439466 ( 32) CTTCACCT 1 chr11:67206121-67206201 ( 56) CAGCAGCA 1 chr11:63992308-63992388 ( 19) CAGCTGCA 1 chr1:1471571-1471651 ( 70) CAGCCACT 1 chr8:142443572-142443652 ( 16) CAGCCACT 1 chr7:100276347-100276427 ( 68) CTGGAACT 1 chr8:145538001-145538081 ( 7) CTGGGCCA 1 chr16:635509-635589 ( 68) CAGCCACT 1 chr11:63990581-63990661 ( 38) CAGCAACA 1 chr9:139735330-139735410 ( 25) CTTGCCCT 1 chr17:74076256-74076336 ( 14) CAGGGTCT 1 chr17:74268453-74268533 ( 55) CATGCCCA 1 chr4:756189-756269 ( 47) CATCCCCA 1 chr11:281596-281676 ( 68) CTGGCGCT 1 chr16:780442-780522 ( 5) CTTCTCCA 1 chr21:45560693-45560773 ( 58) CAGCGTCT 1 chr19:54675765-54675845 ( 22) CAGGGTCT 1 chr19:50360458-50360538 ( 32) CTGGAGCA 1 chr20:62331817-62331897 ( 29) CTTCACCA 1 chr8:144897435-144897515 ( 51) CTTGTCCA 1 chr21:44474027-44474107 ( 35) CTGCCGCT 1 chr6:16760865-16760945 ( 2) CAGCCGCA 1 chr8:145536997-145537077 ( 3) CAGCCGCA 1 chr22:20097606-20097686 ( 59) CAGCCGCA 1 chr17:76107972-76108052 ( 24) CTGGAGCA 1 chr16:1828424-1828504 ( 65) CTGCTACA 1 chr17:79496132-79496212 ( 49) CTGCTACA 1 chr7:44104876-44104956 ( 16) CAGCCACA 1 chr3:129032357-129032437 ( 64) CAGCCACA 1 chr19:54677974-54678054 ( 64) CAGGCACA 1 chr11:860829-860909 ( 55) CTTCCCCA 1 chr19:50358308-50358388 ( 2) CTGCCGCA 1 chr19:58908032-58908112 ( 9) CTGGGTCT 1 chr16:2030881-2030961 ( 46) CAGGGTCA 1 chr20:62487148-62487228 ( 28) CTGGGTCT 1 chr16:851709-851789 ( 30) CTTCCCCA 1 chr11:67401750-67401830 ( 32) CTGGGTCT 1 chr17:4437986-4438066 ( 45) CTGGCGCA 1 chr9:138397736-138397816 ( 6) CTGGCACA 1 chr3:52557479-52557559 ( 68) CATCATCA 1 chr11:862613-862693 ( 44) CATCATCA 1 chr17:79501204-79501284 ( 40) CATCCTCT 1 chr2:97543684-97543764 ( 21) CATGGCCT 1 chr17:79857806-79857886 ( 57) CATCCTCA 1 chr22:20100800-20100880 ( 48) CTTGCTCT 1 chr2:97548097-97548177 ( 34) CAGGGGCA 1 chr19:18546133-18546213 ( 62) CTGCGGCT 1 chr16:2200892-2200972 ( 28) CTGCGGCT 1 chr19:14272206-14272286 ( 62) CTGGGGCT 1 chr11:64010785-64010865 ( 37) CATGGCCA 1 chr16:57507238-57507318 ( 66) CTTGGCCT 1 chr9:127618721-127618801 ( 38) CTGGGACT 1 chr19:2230983-2231063 ( 53) CTGGGACT 1 chr19:56000787-56000867 ( 1) CTGGGGCA 1 chr1:156612148-156612228 ( 25) CTGGGGCA 1 chr19:58982846-58982926 ( 33) CTTCCGCT 1 chr16:88874575-88874655 ( 12) CATCCGCA 1 chr9:140509092-140509172 ( 49) CTTCCGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 8.36989 E= 5.6e+001 -1384 158 -1384 -1384 182 -1384 -1384 148 -1384 -1384 128 0 -1384 57 53 -1384 35 16 -77 48 -85 70 -72 0 -1384 158 -1384 -1384 153 -1384 -1384 178 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 147 E= 5.6e+001 0.000000 1.000000 0.000000 0.000000 0.564626 0.000000 0.000000 0.435374 0.000000 0.000000 0.843537 0.156463 0.000000 0.496599 0.503401 0.000000 0.204082 0.374150 0.204082 0.217687 0.088435 0.544218 0.210884 0.156463 0.000000 1.000000 0.000000 0.000000 0.462585 0.000000 0.000000 0.537415 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CWGSNCCW MEME-3 regular expression -------------------------------------------------------------------------------- C[AT]G[GC][CTAG][CG]C[TA] -------------------------------------------------------------------------------- Time 11.84 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTAWWTT MEME-4 width = 8 sites = 3 llr = 41 E-value = 2.5e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::a73:: pos.-specific C :::::::: probability G :::::::: matrix T aaa:37aa bits 2.7 **** ** 2.4 **** ** 2.1 **** ** 1.9 **** *** Relative 1.6 ******** Entropy 1.3 ******** (19.5 bits) 1.1 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTTAATTT consensus TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr6:68588813-68588893 28 3.69e-07 atattaataa tttaattt gctaatattt chr8:128754677-128754757 69 7.29e-07 TTATTTTGTT TTTATTTT GTTG chr19:29106911-29106991 24 1.11e-06 aaaatgaatg tttaaatt gaagaaaatg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:68588813-68588893 3.7e-07 27_[+4]_45 chr8:128754677-128754757 7.3e-07 68_[+4]_4 chr19:29106911-29106991 1.1e-06 23_[+4]_49 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTAWWTT width=8 seqs=3 chr6:68588813-68588893 ( 28) TTTAATTT 1 chr8:128754677-128754757 ( 69) TTTATTTT 1 chr19:29106911-29106991 ( 24) TTTAAATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 13.0179 E= 2.5e+002 -823 -823 -823 267 -823 -823 -823 267 -823 -823 -823 267 264 -823 -823 -823 206 -823 -823 109 106 -823 -823 209 -823 -823 -823 267 -823 -823 -823 267 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 3 E= 2.5e+002 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.666667 0.000000 0.000000 0.333333 0.333333 0.000000 0.000000 0.666667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTAWWTT MEME-4 regular expression -------------------------------------------------------------------------------- TTTA[AT][TA]TT -------------------------------------------------------------------------------- Time 15.07 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTTWKAA MEME-5 width = 8 sites = 2 llr = 26 E-value = 1.3e+004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A ::::5:aa pos.-specific C :::::::: probability G :::::5:: matrix T aaaa55:: bits 2.7 **** ** 2.4 **** ** 2.1 **** ** 1.9 **** ** Relative 1.6 ***** ** Entropy 1.3 ***** ** (18.8 bits) 1.1 ******** 0.8 ******** 0.5 ******** 0.3 ******** 0.0 -------- Multilevel TTTTAGAA consensus TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Start P-value Site ------------- ----- --------- -------- chr8:128754677-128754757 2 7.47e-07 G TTTTTTAA GTCTCAACAT chr2:85774419-85774499 47 2.41e-06 GATAGCCCAT TTTTAGAA TGGCTACAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:128754677-128754757 7.5e-07 1_[+5]_71 chr2:85774419-85774499 2.4e-06 46_[+5]_26 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTTWKAA width=8 seqs=2 chr8:128754677-128754757 ( 2) TTTTTTAA 1 chr2:85774419-85774499 ( 47) TTTTAGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 8 n= 18250 bayes= 12.3073 E= 1.3e+004 -765 -765 -765 267 -765 -765 -765 267 -765 -765 -765 267 -765 -765 -765 267 164 -765 -765 167 -765 -765 52 167 264 -765 -765 -765 264 -765 -765 -765 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 8 nsites= 2 E= 1.3e+004 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.500000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.500000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTTWKAA MEME-5 regular expression -------------------------------------------------------------------------------- TTTT[AT][GT]AA -------------------------------------------------------------------------------- Time 18.41 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:76107972-76108052 2.43e-01 80 chr17:79859850-79859930 9.89e-01 80 chr17:4437986-4438066 5.69e-01 80 chr1:3694422-3694502 7.05e-02 80 chr16:1829833-1829913 5.62e-01 80 chr1:3697612-3697692 8.96e-01 80 chr16:89762017-89762097 7.24e-01 80 chr5:176734889-176734969 7.70e-02 80 chr16:1830100-1830180 3.88e-01 80 chr16:731195-731275 4.48e-01 80 chr2:97540438-97540518 9.72e-01 80 chr2:97542038-97542118 3.45e-01 80 chr2:97543684-97543764 6.07e-01 80 chr17:4436552-4436632 3.36e-01 80 chr8:144683636-144683716 2.35e-01 80 chr9:139693980-139694060 2.71e-01 80 chr12:132340414-13234049 1.29e-01 80 chr19:3536887-3536967 4.60e-01 80 chr16:88874575-88874655 7.33e-01 80 chr11:860447-860527 9.33e-01 80 chr19:866467-866547 2.40e-01 80 chr19:2413808-2413888 8.94e-01 80 chr11:65637601-65637681 3.48e-01 80 chr5:180661217-180661297 9.71e-01 80 chr16:637246-637326 1.08e-01 80 chr11:63992308-63992388 4.54e-03 2_[+1(5.95e-05)]_70 chr22:41921513-41921593 3.23e-01 80 chr19:54677974-54678054 1.41e-01 33_[+1(5.95e-05)]_39 chr17:72207529-72207609 2.00e-01 80 chrX:1538073-1538153 5.21e-01 80 chr19:1065392-1065472 6.41e-01 80 chr9:130690382-130690462 4.91e-02 80 chr11:65363187-65363267 4.69e-01 80 chr8:144684701-144684781 4.26e-02 80 chr19:55963576-55963656 5.56e-01 80 chr11:71951219-71951299 2.02e-01 80 chr11:63990581-63990661 2.23e-01 80 chr17:79501204-79501284 4.91e-01 80 chr21:46929572-46929652 1.49e-01 80 chr22:20097606-20097686 4.90e-01 80 chr8:41511151-41511231 9.33e-01 80 chr8:145536997-145537077 3.49e-01 80 chr19:51296927-51297007 5.47e-01 80 chr19:13206372-13206452 1.60e-01 80 chr5:675599-675679 5.32e-01 80 chr17:4437500-4437580 2.66e-01 80 chr19:866963-867043 5.81e-01 80 chr17:79503584-79503664 5.29e-01 80 chr19:46285492-46285572 3.83e-01 10_[+3(7.05e-05)]_62 chr18:75680811-75680891 1.99e-01 80 chr17:76108279-76108359 3.48e-01 80 chr19:59073780-59073860 5.25e-01 80 chr1:155255630-155255710 4.50e-02 80 chr1:155257927-155258007 9.68e-01 80 chr9:139570188-139570268 7.90e-02 34_[+1(5.95e-05)]_38 chr19:58982456-58982536 2.33e-01 33_[+3(7.05e-05)]_39 chr6:16760865-16760945 9.07e-01 80 chr1:1292449-1292529 9.51e-02 80 chr20:62329692-62329772 3.53e-01 80 chr19:51015640-51015720 6.10e-03 80 chr16:3024206-3024286 1.21e-01 80 chr16:89661891-89661971 1.14e-01 21_[+3(7.05e-05)]_51 chr21:44474027-44474107 6.19e-01 80 chr11:67206121-67206201 4.25e-01 80 chr19:58983348-58983428 2.11e-01 80 chr11:862613-862693 1.41e-01 80 chr8:145750195-145750275 9.81e-01 80 chr22:19958777-19958857 9.53e-01 80 chr19:49472102-49472182 1.19e-02 80 chr1:156612148-156612228 6.67e-01 80 chr1:202146806-202146886 2.39e-01 45_[+1(5.95e-05)]_27 chr5:673866-673946 5.33e-02 80 chr2:85774419-85774499 4.74e-04 46_[+5(2.41e-06)]_26 chr19:871093-871173 4.71e-01 80 chr21:45750417-45750497 6.09e-01 80 chr16:773464-773544 5.35e-01 80 chr19:5892131-5892211 3.83e-02 64_[+3(7.05e-05)]_8 chr5:677004-677084 9.99e-01 80 chr9:140508669-140508749 1.85e-01 80 chrX:49028442-49028522 6.74e-01 80 chr20:61446315-61446395 3.19e-01 40_[+1(5.95e-05)]_32 chr17:78942967-78943047 8.54e-01 80 chr16:571561-571641 1.23e-01 63_[+3(7.05e-05)]_9 chr19:1471036-1471116 9.89e-01 80 chr3:195771505-195771585 4.66e-01 80 chr8:144654915-144654995 5.39e-01 80 chr11:840383-840463 8.65e-02 80 chr3:129032357-129032437 8.00e-01 80 chr22:50638819-50638899 4.45e-01 80 chr2:97545351-97545431 9.38e-01 80 chr11:6494966-6495046 8.63e-01 80 chr19:17004477-17004557 2.74e-01 80 chr11:67401750-67401830 6.40e-01 80 chr11:865794-865874 9.43e-01 80 chr21:45562949-45563029 1.18e-01 80 chr10:135163139-13516321 2.63e-01 80 chr19:7600117-7600197 9.76e-01 80 chr16:635509-635589 1.06e-01 80 chr19:50361541-50361621 1.67e-01 80 chr19:50004051-50004131 8.87e-02 80 chr22:19959029-19959109 4.13e-02 65_[+3(7.05e-05)]_7 chr17:4439386-4439466 4.21e-01 80 chr16:851709-851789 6.27e-01 80 chr4:951926-952006 6.49e-02 80 chr6:68588813-68588893 1.83e-08 27_[+4(3.69e-07)]_4_[+2(1.12e-06)]_\ 6_[+5(6.40e-06)]_19 chr19:2230983-2231063 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