# DREME 5.3.3
#     command: dreme -oc ../result/final_prediction/K562/inference_raw/DREME/RankLinear0.3_10_ZBTB7A/ -k 8 -m 5 -e 1000 -verbosity 1 -p ../result/final_prediction/K562/fasta/RankLinear0.3_10/ZBTB7A.fasta
#   positives: 250 from ../result/final_prediction/K562/fasta/RankLinear0.3_10/ZBTB7A.fasta (Sat Feb 12 18:00:41 EST 2022)
#   negatives: 250 from shuffled positives
#        host: c28n04.farnam.hpc.yale.internal
#        when: Sat Feb 12 18:28:04 EST 2022

MEME version 5.3.3

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.120 C 0.378 G 0.374 T 0.128


MOTIF AGGGGCGC DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    AGGGGCGC   GCGCCCCT          8          0   3.7e-003   8.0e+000
#         AGGGGCGC   GCGCCCCT          8          0   3.7e-003   8.0e+000

letter-probability matrix: alength= 4 w= 8 nsites= 8 E= 8.0e+000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000


MOTIF CCCCGCCG DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    CCCCGCCG   CGGCGGGG          9          1   1.0e-002   2.2e+001

letter-probability matrix: alength= 4 w= 8 nsites= 9 E= 2.2e+001
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000


MOTIF CGGGGGTC DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    CGGGGGTC   GACCCCCG          9          1   1.0e-002   2.1e+001

letter-probability matrix: alength= 4 w= 8 nsites= 11 E= 2.1e+001
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000


MOTIF GACCCCCA DREME-4

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    GACCCCCA   TGGGGGTC          6          0   1.5e-002   3.2e+001

letter-probability matrix: alength= 4 w= 8 nsites= 6 E= 3.2e+001
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF AGGGGGCG DREME-5

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    AGGGGGCG   CGCCCCCT         10          2   1.8e-002   3.8e+001

letter-probability matrix: alength= 4 w= 8 nsites= 10 E= 3.8e+001
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000


# Stopping reason: target motif count reached
#    Running time: 0.65 seconds