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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.216 C 0.284 G 0.284 T 0.216 

MOTIF 1-RCCAATSR STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 47 P= 3.6e-001
 0.414915 0.001261 0.397096 0.186727
 0.000960 0.996819 0.001261 0.000960
 0.000960 0.922503 0.001261 0.075276
 0.996518 0.001261 0.001261 0.000960
 0.996518 0.001261 0.001261 0.000960
 0.000960 0.062833 0.001261 0.934946
 0.157843 0.518637 0.322561 0.000960
 0.588618 0.001261 0.409161 0.000960

MOTIF 2-GGTTKGGA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 13 P= 5.0e-001
 0.169475 0.003417 0.824506 0.002601
 0.002601 0.003417 0.991380 0.002601
 0.002601 0.003417 0.086854 0.907127
 0.002601 0.003417 0.003417 0.990564
 0.002601 0.170291 0.288537 0.538570
 0.002601 0.204832 0.539655 0.252912
 0.002601 0.003417 0.873403 0.120578
 0.990564 0.003417 0.003417 0.002601

MOTIF 3-AGGBGCAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 11 P= 1.0e+000
 0.988859 0.004035 0.004035 0.003071
 0.003071 0.102550 0.891307 0.003071
 0.003071 0.004035 0.989822 0.003071
 0.003071 0.398413 0.201066 0.397450
 0.200102 0.004035 0.792792 0.003071
 0.003071 0.891307 0.004035 0.101587
 0.988859 0.004035 0.004035 0.003071
 0.003071 0.792792 0.102550 0.101587

MOTIF 4-GGGCACGC STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 7 P= 1.0e+000
 0.005074 0.006666 0.983186 0.005074
 0.167827 0.169419 0.494926 0.167827
 0.005074 0.006666 0.983186 0.005074
 0.005074 0.983186 0.006666 0.005074
 0.818840 0.006666 0.006666 0.167827
 0.005074 0.820432 0.006666 0.167827
 0.005074 0.006666 0.983186 0.005074
 0.005074 0.983186 0.006666 0.005074

MOTIF 5-CCGCCTCC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 5 P= 1.0e+000
 0.019645 0.934900 0.025809 0.019645
 0.019645 0.934900 0.025809 0.019645
 0.019645 0.025809 0.934900 0.019645
 0.019645 0.934900 0.025809 0.019645
 0.019645 0.934900 0.025809 0.019645
 0.019645 0.025809 0.025809 0.928736
 0.019645 0.934900 0.025809 0.019645
 0.019645 0.934900 0.025809 0.019645

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/GM12878/fasta/RankLinear0.5_10/CEBPZ.fasta --oc ../result/final_prediction/GM12878/inference_raw/STREME/RankLinear0.5_10_CEBPZ/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c17n10.farnam.hpc.yale.internal
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FINALTIME:	0.68 seconds
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