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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.257 C 0.243 G 0.243 T 0.257 

MOTIF 1-CTTCTGGC STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 38 P= 1.7e-001
 0.010829 0.919864 0.044917 0.024389
 0.000748 0.034616 0.069775 0.894860
 0.105412 0.034616 0.006696 0.853276
 0.069644 0.892358 0.014643 0.023355
 0.020910 0.069601 0.020867 0.888621
 0.105509 0.150247 0.622234 0.122009
 0.085315 0.017398 0.795308 0.101979
 0.020910 0.761760 0.142096 0.075235

MOTIF 2-BYAATTRV STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 87 P= 2.3e-001
 0.104958 0.225678 0.361761 0.307604
 0.000603 0.342264 0.000568 0.656565
 0.959216 0.025959 0.000568 0.014257
 0.843308 0.058470 0.064991 0.033231
 0.033231 0.064991 0.058470 0.843308
 0.014257 0.000568 0.025959 0.959216
 0.656565 0.000568 0.342264 0.000603
 0.307604 0.361761 0.225678 0.104958

MOTIF 3-GCTAATGA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 58 P= 5.0e-001
 0.063318 0.049439 0.802635 0.084608
 0.000771 0.774267 0.013308 0.211653
 0.000771 0.000728 0.021510 0.976991
 0.926578 0.000728 0.051141 0.021553
 0.989170 0.009331 0.000728 0.000771
 0.021553 0.021510 0.000728 0.956210
 0.000771 0.000728 0.901429 0.097072
 0.951939 0.021510 0.014582 0.011969

MOTIF 4-CAGGTAGM STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 5.0e-001
 0.001001 0.943044 0.000944 0.055012
 0.997111 0.000944 0.000944 0.001001
 0.001001 0.000944 0.997054 0.001001
 0.001001 0.000944 0.997054 0.001001
 0.001001 0.000944 0.000944 0.997111
 0.997111 0.000944 0.000944 0.001001
 0.245055 0.054955 0.656911 0.043079
 0.324219 0.506047 0.082091 0.087643

MOTIF 5-CCGCTGCS STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 32 P= 5.0e-001
 0.001786 0.994744 0.001684 0.001786
 0.001786 0.994744 0.001684 0.001786
 0.001786 0.001684 0.994744 0.001786
 0.001786 0.994744 0.001684 0.001786
 0.001786 0.170646 0.001684 0.825884
 0.049893 0.001684 0.946637 0.001786
 0.194679 0.801851 0.001684 0.001786
 0.001786 0.411490 0.536831 0.049893

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/zen.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_zen/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n06.farnam.hpc.yale.internal
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FINALTIME:	1.83 seconds
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