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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.307 C 0.193 G 0.193 T 0.307 

MOTIF 1-AGTCAACA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 30 P= 1.2e-001
 0.814828 0.106618 0.036193 0.042361
 0.077399 0.177497 0.743546 0.001559
 0.016136 0.000981 0.000981 0.981902
 0.225913 0.732063 0.000981 0.041043
 0.890842 0.000981 0.036193 0.071984
 0.890842 0.036193 0.000981 0.071984
 0.001559 0.960689 0.000981 0.036771
 0.961267 0.000981 0.000981 0.036771

MOTIF 2-GGTAAATA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 5.0e-001
 0.001732 0.118796 0.877741 0.001732
 0.001732 0.001090 0.995447 0.001732
 0.001732 0.001090 0.040199 0.956980
 0.921235 0.017280 0.020644 0.040841
 0.917745 0.079434 0.001090 0.001732
 0.930309 0.001090 0.001090 0.067512
 0.001732 0.158541 0.001090 0.838638
 0.901680 0.017280 0.040199 0.040841

MOTIF 3-AAGTGCTG STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 29 P= 5.0e-001
 0.772586 0.166409 0.018137 0.042868
 0.988044 0.001144 0.001144 0.009669
 0.125366 0.018137 0.785634 0.070862
 0.001818 0.042194 0.001144 0.954845
 0.042868 0.001144 0.871938 0.084051
 0.001818 0.926177 0.001144 0.070862
 0.001818 0.124692 0.018137 0.855353
 0.042868 0.042194 0.898046 0.016892

MOTIF 4-WTAYRTAW STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 139 P= 6.1e-001
 0.511809 0.125075 0.073635 0.289481
 0.000563 0.017029 0.064910 0.917498
 0.806001 0.190451 0.002986 0.000563
 0.101127 0.376617 0.013109 0.509147
 0.509147 0.013109 0.376617 0.101127
 0.000563 0.002986 0.190451 0.806001
 0.917498 0.064910 0.017029 0.000563
 0.289481 0.073635 0.125075 0.511809

MOTIF 5-GCAAACAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 61 P= 7.5e-001
 0.063008 0.000799 0.885532 0.050661
 0.018061 0.944857 0.007148 0.029935
 0.898713 0.087352 0.012665 0.001269
 0.858707 0.052952 0.087072 0.001269
 0.991651 0.000799 0.006281 0.001269
 0.001269 0.811907 0.070336 0.116487
 0.989019 0.006281 0.000799 0.003901
 0.770126 0.018152 0.148714 0.063008

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/tup.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_tup/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n07.farnam.hpc.yale.internal
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FINALTIME:	1.64 seconds
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