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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.321 C 0.179 G 0.179 T 0.321 

MOTIF 1-ATTTAAAT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 51 P= 2.1e-001
 0.944340 0.051246 0.002681 0.001733
 0.038150 0.000965 0.038175 0.922711
 0.001733 0.019660 0.061044 0.917563
 0.001733 0.038175 0.190993 0.769100
 0.769100 0.190993 0.038175 0.001733
 0.917563 0.061044 0.019660 0.001733
 0.922711 0.038175 0.000965 0.038150
 0.001733 0.002681 0.051246 0.944340

MOTIF 2-CATCTCTA STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 20 P= 2.4e-001
 0.003190 0.991845 0.001776 0.003190
 0.993259 0.001776 0.001776 0.003190
 0.003190 0.001776 0.001776 0.993259
 0.003190 0.991845 0.001776 0.003190
 0.003190 0.208509 0.001776 0.786526
 0.003190 0.991845 0.001776 0.003190
 0.003190 0.001776 0.001776 0.993259
 0.786526 0.001776 0.001776 0.209923

MOTIF 3-GATGGCGC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 45 P= 3.3e-001
 0.001306 0.000727 0.996662 0.001306
 0.660698 0.000727 0.309091 0.029484
 0.001306 0.000727 0.057084 0.940883
 0.001306 0.000727 0.996662 0.001306
 0.001306 0.000727 0.883674 0.114293
 0.142380 0.855588 0.000727 0.001306
 0.154227 0.113577 0.702667 0.029530
 0.029484 0.912081 0.000727 0.057708

MOTIF 4-WATMKATW STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 70 P= 5.0e-001
 0.355171 0.022076 0.017683 0.605070
 0.961142 0.000734 0.036805 0.001319
 0.001319 0.035125 0.000734 0.962822
 0.323525 0.554870 0.024665 0.096941
 0.096941 0.024665 0.554870 0.323525
 0.962822 0.000734 0.035125 0.001319
 0.001319 0.036805 0.000734 0.961142
 0.605070 0.017683 0.022076 0.355171

MOTIF 5-CAAATAAT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 59 P= 9.1e-001
 0.001394 0.919638 0.000776 0.078193
 0.864014 0.091291 0.013226 0.031469
 0.903813 0.034499 0.009711 0.051978
 0.774959 0.147564 0.073732 0.003744
 0.001394 0.013226 0.061120 0.924261
 0.905051 0.009711 0.006528 0.078710
 0.964987 0.000776 0.006528 0.027709
 0.113109 0.030851 0.055493 0.800547

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/tin.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_tin/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n06.farnam.hpc.yale.internal
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FINALTIME:	3.17 seconds
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