********************************************************************************
STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
********************************************************************************
MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

********************************************************************************


********************************************************************************
REFERENCE
********************************************************************************
If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
********************************************************************************


ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.334 C 0.166 G 0.166 T 0.334 

MOTIF 1-ACATATGT STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 47 P= 3.3e-001
 0.858787 0.000843 0.138681 0.001689
 0.164352 0.833116 0.000843 0.001689
 0.996625 0.000843 0.000843 0.001689
 0.001689 0.036058 0.233424 0.728829
 0.728829 0.233424 0.036058 0.001689
 0.001689 0.000843 0.000843 0.996625
 0.001689 0.000843 0.833116 0.164352
 0.001689 0.138681 0.000843 0.858787

MOTIF 2-AAATMTAT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 58 P= 6.5e-001
 0.995510 0.001121 0.001121 0.002248
 0.995510 0.001121 0.001121 0.002248
 0.893777 0.001121 0.102854 0.002248
 0.002248 0.001121 0.001121 0.995510
 0.577923 0.418708 0.001121 0.002248
 0.002248 0.001121 0.057767 0.938865
 0.803669 0.192962 0.001121 0.002248
 0.002248 0.001121 0.001121 0.995510

MOTIF 3-CTGTCACA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 1.0e+000
 0.177694 0.775328 0.001049 0.045929
 0.045789 0.044735 0.001049 0.908428
 0.020187 0.044735 0.932975 0.002103
 0.089615 0.001049 0.009405 0.899931
 0.020187 0.845181 0.132530 0.002103
 0.908287 0.001049 0.088562 0.002103
 0.089615 0.819721 0.001049 0.089615
 0.922322 0.001049 0.074526 0.002103

MOTIF 4-GTTGCTAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 1.0e+000
 0.002307 0.001151 0.994236 0.002307
 0.022146 0.001151 0.001151 0.975553
 0.050233 0.001151 0.001151 0.947466
 0.022146 0.049077 0.878544 0.050233
 0.002307 0.994236 0.001151 0.002307
 0.002307 0.242726 0.049077 0.705891
 0.811366 0.020990 0.049077 0.118567
 0.098313 0.049077 0.049077 0.803534

MOTIF 5-AAATGATG STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 23 P= 1.0e+000
 0.883081 0.000742 0.062682 0.053494
 0.966107 0.000742 0.031662 0.001488
 0.935088 0.000742 0.000742 0.063428
 0.001488 0.186861 0.000742 0.810908
 0.001488 0.000742 0.996281 0.001488
 0.748767 0.218082 0.031662 0.001488
 0.037317 0.000742 0.000742 0.961199
 0.101461 0.000742 0.677755 0.220042

********************************************************************************
Stopped because maximum number of motifs (5) reached.
********************************************************************************
COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/tap.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_tap/ --w 8 --nmotifs 5 --verbosity 1
********************************************************************************
CPU:		c28n06.farnam.hpc.yale.internal
********************************************************************************
FINALTIME:	1.95 seconds
********************************************************************************