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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.336 C 0.164 G 0.164 T 0.336 

MOTIF 1-CATTTTCA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 55 P= 1.2e-001
 0.001216 0.841402 0.000596 0.156787
 0.930239 0.042835 0.025709 0.001216
 0.001216 0.081298 0.000596 0.916890
 0.228214 0.000596 0.031056 0.740134
 0.001216 0.000596 0.000596 0.997593
 0.001216 0.000596 0.000596 0.997593
 0.001216 0.844820 0.152748 0.001216
 0.720451 0.151845 0.126488 0.001216

MOTIF 2-ATGTTKAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 19 P= 5.0e-001
 0.957423 0.000922 0.000922 0.040734
 0.067229 0.000922 0.000922 0.930928
 0.001881 0.000922 0.995316 0.001881
 0.001881 0.156897 0.055858 0.785364
 0.001881 0.000922 0.078689 0.918508
 0.040734 0.000922 0.588821 0.369524
 0.941340 0.000922 0.017005 0.040734
 0.197402 0.000922 0.760942 0.040734

MOTIF 3-CTGAAAGA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 25 P= 5.0e-001
 0.088803 0.908075 0.001027 0.002096
 0.045380 0.001027 0.001027 0.952567
 0.074897 0.001027 0.703806 0.220271
 0.995851 0.001027 0.001027 0.002096
 0.779153 0.087734 0.087734 0.045380
 0.987572 0.001027 0.001027 0.010375
 0.002096 0.001027 0.994782 0.002096
 0.865860 0.044310 0.001027 0.088803

MOTIF 4-AACAATCT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 7.6e-001
 0.842698 0.040917 0.017494 0.098892
 0.859589 0.081014 0.040917 0.018481
 0.001935 0.898225 0.000948 0.098892
 0.854599 0.040917 0.081014 0.023471
 0.908458 0.000948 0.081014 0.009580
 0.001935 0.000948 0.000948 0.996169
 0.001935 0.995182 0.000948 0.001935
 0.018481 0.040917 0.121241 0.819362

MOTIF 5-AAATGTAT STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 79 P= 8.6e-001
 0.984986 0.000561 0.000561 0.013892
 0.675944 0.014882 0.054247 0.254926
 0.850894 0.000561 0.119547 0.028998
 0.053495 0.013307 0.067460 0.865737
 0.001145 0.000561 0.997148 0.001145
 0.001145 0.000561 0.073800 0.924494
 0.760168 0.238126 0.000561 0.001145
 0.001145 0.081447 0.081324 0.836084

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/tai.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_tai/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n01.farnam.hpc.yale.internal
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FINALTIME:	2.14 seconds
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