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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.27 C 0.23 G 0.23 T 0.27 

MOTIF 1-TCTTATCA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 97 P= 9.6e-004
 0.004251 0.153233 0.159080 0.683436
 0.000584 0.973494 0.025337 0.000584
 0.015586 0.003361 0.006696 0.974357
 0.091178 0.000496 0.001871 0.906455
 0.998423 0.000496 0.000496 0.000584
 0.000584 0.000496 0.000496 0.998423
 0.000584 0.998335 0.000496 0.000584
 0.702295 0.015473 0.168787 0.113444

MOTIF 2-ACCCCCAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 83 P= 1.2e-001
 0.758421 0.151606 0.089255 0.000718
 0.000718 0.997954 0.000610 0.000718
 0.000718 0.997954 0.000610 0.000718
 0.021357 0.822324 0.000610 0.155709
 0.000718 0.997954 0.000610 0.000718
 0.111395 0.850346 0.000610 0.037650
 0.689755 0.058660 0.000610 0.250975
 0.247049 0.000610 0.720664 0.031677

MOTIF 3-CTGATAAC STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 69 P= 1.4e-001
 0.027226 0.745546 0.139152 0.088076
 0.040382 0.071398 0.128041 0.760180
 0.000915 0.024242 0.950463 0.024380
 0.997530 0.000777 0.000777 0.000915
 0.012648 0.071246 0.094862 0.821243
 0.861976 0.002932 0.024242 0.110851
 0.870739 0.071398 0.047478 0.010385
 0.085221 0.861519 0.000777 0.052483

MOTIF 4-AGCGATAA STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 2.4e-001
 0.994040 0.001876 0.001876 0.002209
 0.002209 0.001876 0.993707 0.002209
 0.002209 0.993707 0.001876 0.002209
 0.002209 0.001876 0.993707 0.002209
 0.857358 0.058497 0.058497 0.025648
 0.002209 0.097110 0.007075 0.893607
 0.823628 0.001876 0.172287 0.002209
 0.785381 0.115300 0.097110 0.002209

MOTIF 5-AAACAAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 31 P= 8.8e-001
 0.859997 0.001123 0.001123 0.137758
 0.961888 0.001123 0.015152 0.021838
 0.996433 0.001123 0.001123 0.001322
 0.001322 0.996233 0.001123 0.001322
 0.925404 0.001123 0.058123 0.015351
 0.948514 0.001123 0.015152 0.035211
 0.758874 0.069010 0.001123 0.170993
 0.803018 0.171945 0.023715 0.001322

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/sug.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_sug/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n01.farnam.hpc.yale.internal
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FINALTIME:	2.29 seconds
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