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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.331 C 0.169 G 0.169 T 0.331 

MOTIF 1-AGATGGCR STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 1.7e-001
 0.842312 0.001238 0.154026 0.002423
 0.002423 0.001238 0.993915 0.002423
 0.995100 0.001238 0.001238 0.002423
 0.104118 0.001238 0.001238 0.893405
 0.002423 0.001238 0.993915 0.002423
 0.155211 0.001238 0.739596 0.103954
 0.002423 0.993915 0.001238 0.002423
 0.481473 0.001238 0.514865 0.002423

MOTIF 2-AAATATTT STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 57 P= 6.5e-001
 0.919969 0.001276 0.001276 0.077479
 0.883922 0.001276 0.112305 0.002497
 0.865058 0.057606 0.074840 0.002497
 0.002497 0.001276 0.001276 0.994951
 0.994951 0.001276 0.001276 0.002497
 0.002497 0.074840 0.057606 0.865058
 0.002497 0.112305 0.001276 0.883922
 0.077479 0.001276 0.001276 0.919969

MOTIF 3-CAAATATA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 22 P= 1.0e+000
 0.002774 0.993035 0.001417 0.002774
 0.963085 0.001417 0.001417 0.034080
 0.710808 0.001417 0.001417 0.286357
 0.703132 0.176286 0.117809 0.002774
 0.002774 0.001417 0.001417 0.994391
 0.994391 0.001417 0.001417 0.002774
 0.002774 0.001417 0.001417 0.994391
 0.994391 0.001417 0.001417 0.002774

MOTIF 4-CCGTYCTM STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 26 P= 1.0e+000
 0.001193 0.746881 0.000610 0.251316
 0.001193 0.811421 0.085999 0.101387
 0.001193 0.050626 0.946988 0.001193
 0.161547 0.000610 0.000610 0.837234
 0.001193 0.350766 0.000610 0.647431
 0.001193 0.947028 0.050586 0.001193
 0.176432 0.225624 0.100643 0.497301
 0.311798 0.536390 0.125631 0.026181

MOTIF 5-CAGCTAAA STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 11 P= 1.0e+000
 0.030082 0.924464 0.015373 0.030082
 0.939173 0.015373 0.015373 0.030082
 0.030082 0.015373 0.924464 0.030082
 0.030082 0.924464 0.015373 0.030082
 0.030082 0.015373 0.015373 0.939173
 0.939173 0.015373 0.015373 0.030082
 0.939173 0.015373 0.015373 0.030082
 0.939173 0.015373 0.015373 0.030082

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/slou.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_slou/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c28n01.farnam.hpc.yale.internal
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FINALTIME:	1.67 seconds
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