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STREME - Sensitive, Thorough, Rapid, Enriched Motif Elicitation
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MEME version 5.3.3 (Release date: Sun Feb 7 15:39:52 2021 -0800)

For further information on how to interpret these results please access https://meme-suite.org/meme.
To get a copy of the MEME Suite software please access https://meme-suite.org.

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REFERENCE
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If you use this program in your research, please cite:

Timothy L. Bailey,
"STREME: Accurate and versatile sequence motif discovery",
bioRxiv, (preprint), Nov. 23, 2020.
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ALPHABET= ACGT

strands: + -

Background letter frequencies
A 0.332 C 0.169 G 0.169 T 0.332 

MOTIF 1-GCACTGAA STREME-1
letter-probability matrix: alength= 4 w= 8 nsites= 46 P= 9.5e-002
 0.001758 0.000893 0.958841 0.038508
 0.038508 0.922091 0.000893 0.038508
 0.966029 0.016107 0.000893 0.016971
 0.038508 0.811128 0.000893 0.149471
 0.063570 0.000893 0.037644 0.897893
 0.001758 0.000893 0.958841 0.038508
 0.830665 0.111500 0.019269 0.038567
 0.715892 0.037644 0.244706 0.001758

MOTIF 2-GATCATAG STREME-2
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 2.4e-001
 0.045207 0.052905 0.900638 0.001250
 0.751154 0.000635 0.079081 0.169130
 0.079738 0.026812 0.040852 0.852598
 0.012069 0.881423 0.052905 0.053603
 0.626254 0.168346 0.063724 0.141676
 0.053561 0.079123 0.011454 0.855861
 0.803592 0.116077 0.026770 0.053561
 0.027385 0.052905 0.808343 0.111368

MOTIF 3-AAAACCAA STREME-3
letter-probability matrix: alength= 4 w= 8 nsites= 79 P= 7.7e-001
 0.937472 0.019564 0.035586 0.007379
 0.927167 0.000845 0.035586 0.036403
 0.857348 0.105404 0.000845 0.036403
 0.857572 0.035586 0.070439 0.036403
 0.010066 0.879976 0.012109 0.097848
 0.085226 0.867774 0.010597 0.036403
 0.870228 0.085121 0.039800 0.004852
 0.901055 0.035642 0.035586 0.027717

MOTIF 4-ATACGCAT STREME-4
letter-probability matrix: alength= 4 w= 8 nsites= 24 P= 1.0e+000
 0.897136 0.050259 0.050259 0.002347
 0.002347 0.001193 0.001193 0.995268
 0.847912 0.050259 0.001193 0.100636
 0.002347 0.994114 0.001193 0.002347
 0.002347 0.148865 0.846441 0.002347
 0.002347 0.747833 0.198408 0.051413
 0.936817 0.001193 0.050259 0.011731
 0.100636 0.148865 0.001193 0.749305

MOTIF 5-TGACTAAC STREME-5
letter-probability matrix: alength= 4 w= 8 nsites= 28 P= 1.0e+000
 0.081513 0.040772 0.080705 0.797011
 0.001904 0.017445 0.978747 0.001904
 0.876620 0.040772 0.080705 0.001904
 0.023351 0.854236 0.080705 0.041708
 0.001904 0.040772 0.040772 0.916552
 0.677469 0.080705 0.080577 0.161250
 0.916552 0.040772 0.040772 0.001904
 0.121702 0.795690 0.000968 0.081641

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Stopped because maximum number of motifs (5) reached.
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COMMAND:	streme --p ../result/final_prediction/fly/fasta/RankLinear8.0_60/sens.fasta --oc ../result/final_prediction/fly/inference_raw/STREME/RankLinear8.0_60_sens/ --w 8 --nmotifs 5 --verbosity 1
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CPU:		c27n09.farnam.hpc.yale.internal
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FINALTIME:	1.60 seconds
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